|
Name |
Accession |
Description |
Interval |
E-value |
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
18-904 |
0e+00 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 790.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 18 ASLLTACGGQDSTTLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEEN 97
Cdd:TIGR02917 11 ALALSACGDQSPEELIEAAKSYLQKNKYKAAIIQLKNALQKDPNDAEARFLLGKIYLALGDYAAAEKELRKALSLGYPKN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 98 AVNPMIARALLGQRDFERVLDELPAPVA-SDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLAL 176
Cdd:TIGR02917 91 QVLPLLARAYLLQGKFQQVLDELPGKTLlDDEGAAELLALRGLAYLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLAL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 177 ADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREV 256
Cdd:TIGR02917 171 AENRFDEARALIDEVLTADPGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFEEAEKHA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 257 DAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLY 336
Cdd:TIGR02917 251 DALLKKAPNSPLAHYLKALVDFQKKNYEDARETLQDALKSAPEYLPALLLAGASEYQLGNLEQAYQYLNQILKYAPNSHQ 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 337 ALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQ 416
Cdd:TIGR02917 331 ARRLLASIQLRLGRVDEAIATLSPALGLDPDDPAALSLLGEAYLALGDFEKAAEYLAKATELDPENAAARTQLGISKLSQ 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 417 GDSR-AMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQ 495
Cdd:TIGR02917 411 GDPSeAIADLETAAQLDPELGRADLLLILSYLRSGQFDKALAAAKKLEKKQPDNASLHNLLGAIYLGKGDLAKAREAFEK 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 496 ALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQPR 575
Cdd:TIGR02917 491 ALSIEPDFFPAAANLARIDIQEGNPDDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNEEEAVAWLEKAAELNPQEIEPA 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 576 VALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKD 655
Cdd:TIGR02917 571 LALAQYYLGKGQLKKALAILNEAADAAPDSPEAWLMLGRAQLAAGDLNKAVSSFKKLLALQPDSALALLLLADAYAVMKN 650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 656 LPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAH 735
Cdd:TIGR02917 651 YAKAITSLKRALELKPDNTEAQIGLAQLLLAAKRTESAKKIAKSLQKQHPKAALGFELEGDLYLRQKDYPAAIQAYRKAL 730
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 736 ALEPAGMLLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNL 815
Cdd:TIGR02917 731 KRAPSSQNAIKLHRALLASGNTAEAVKTLEAWLKTHPNDAVLRTALAELYLAQKDYDKAIKHYQTVVKKAPDNAVVLNNL 810
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 816 AWALNETGDKRAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRA 895
Cdd:TIGR02917 811 AWLYLELKDPRALEYAERALKLAPNIPAILDTLGWLLVEKGEADRALPLLRKAVNIAPEAAAIRYHLALALLATGRKAEA 890
|
....*....
gi 1308963986 896 RGELERLLA 904
Cdd:TIGR02917 891 RKELDKLLN 899
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
473-771 |
1.95e-26 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 109.82 E-value: 1.95e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 473 WNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKHlnamlaladlalrdk 552
Cdd:COG2956 11 WYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDR--------------- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 553 detayvswqekaaaahpeaLQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKL 632
Cdd:COG2956 76 -------------------AEALLELAQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERL 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 633 VERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFI 712
Cdd:COG2956 137 LKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALP 216
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1308963986 713 LEGDTALARKDYPAALAAFERAHALEPAGMLLVRQLQIFNATQRTEEGEKRLAAWLVDH 771
Cdd:COG2956 217 RLAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLERKEGLEAALALLERQLRRH 275
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
136-397 |
2.36e-26 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 109.82 E-value: 2.36e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 136 LRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKP 215
Cdd:COG2956 13 FKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 216 VDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLK 295
Cdd:COG2956 93 DRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALK 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 296 SAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPgVLLVA 375
Cdd:COG2956 173 LDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDD-LLLAL 251
|
250 260
....*....|....*....|..
gi 1308963986 376 GEIALAQKNFAQASAYFEQAAQ 397
Cdd:COG2956 252 ADLLERKEGLEAALALLERQLR 273
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
35-295 |
8.49e-25 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 105.20 E-value: 8.49e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 35 EAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIARALLGQRDFE 114
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 115 RVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRI 194
Cdd:COG2956 94 RAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 195 DPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQA 274
Cdd:COG2956 174 DPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALAD 253
|
250 260
....*....|....*....|.
gi 1308963986 275 LIdFREKKTERARDRLAAVLK 295
Cdd:COG2956 254 LL-ERKEGLEAALALLERQLR 273
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
178-428 |
1.53e-24 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 104.43 E-value: 1.53e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 178 DGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVD 257
Cdd:COG2956 21 NGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDRAEELLE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 258 AALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYA 337
Cdd:COG2956 101 KLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 338 LRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQG 417
Cdd:COG2956 181 LLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLERKEG 260
|
250
....*....|.
gi 1308963986 418 DSRAMADLQTA 428
Cdd:COG2956 261 LEAALALLERQ 271
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
444-704 |
2.41e-24 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 103.66 E-value: 2.41e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 444 LNQLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAA 523
Cdd:COG2956 16 LNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDRA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 524 RQRFEAILKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANP 603
Cdd:COG2956 96 EELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDP 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 604 DNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDwLDAQMMLGGV 683
Cdd:COG2956 176 DCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPS-DDLLLALADL 254
|
250 260
....*....|....*....|.
gi 1308963986 684 EIQGGRYDEAQKLAKQVQQQQ 704
Cdd:COG2956 255 LERKEGLEAALALLERQLRRH 275
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
104-364 |
4.14e-24 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 103.27 E-value: 4.14e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 104 ARALLGQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADK 183
Cdd:COG2956 15 GLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDR 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 184 AMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQAS 263
Cdd:COG2956 95 AEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 264 PNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLyALRLLAA 343
Cdd:COG2956 175 PDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDD-LLLALAD 253
|
250 260
....*....|....*....|.
gi 1308963986 344 TQLRLGRPDDAANTIAPAVRA 364
Cdd:COG2956 254 LLERKEGLEAALALLERQLRR 274
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
577-838 |
8.44e-23 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 99.42 E-value: 8.44e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 577 ALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDL 656
Cdd:COG2956 13 FKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 657 PGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAHA 736
Cdd:COG2956 93 DRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALK 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 737 LEPAGMLLVRQL-QIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNL 815
Cdd:COG2956 173 LDPDCARALLLLaELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALA 252
|
250 260
....*....|....*....|...
gi 1308963986 816 AWALNETGDKRAVSFAEQALKLQ 838
Cdd:COG2956 253 DLLERKEGLEAALALLERQLRRH 275
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
203-466 |
4.57e-21 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 94.03 E-value: 4.57e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 203 LLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKK 282
Cdd:COG2956 12 YFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 283 TERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAV 362
Cdd:COG2956 92 LDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKAL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 363 RAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADLQTAADMEGSSSRADTFI 442
Cdd:COG2956 172 KLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLAL 251
|
250 260
....*....|....*....|....
gi 1308963986 443 ILNQLRQQQFDAALASIAALEKKQ 466
Cdd:COG2956 252 ADLLERKEGLEAALALLERQLRRH 275
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
340-602 |
5.17e-21 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 94.03 E-value: 5.17e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 340 LLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGD- 418
Cdd:COG2956 13 FKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLl 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 419 SRAMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALK 498
Cdd:COG2956 93 DRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALK 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 499 LDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQpRVAL 578
Cdd:COG2956 173 LDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDL-LLAL 251
|
250 260
....*....|....*....|....
gi 1308963986 579 ARYQLAKGDKNKALATAREAANAN 602
Cdd:COG2956 252 ADLLERKEGLEAALALLERQLRRH 275
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
368-905 |
1.11e-19 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 94.77 E-value: 1.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 368 DPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRADTFIILNQ 446
Cdd:TIGR02917 21 SPEELIEAAKSYLQKNKYKAAIIQLKNALQKDPNDAEARFLLGKIYLALGDyAAAEKELRKALSLGYPKNQVLPLLARAY 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 447 LRQQQFDAALASIAALEKKQGADPL-IWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQ 525
Cdd:TIGR02917 101 LLQGKFQQVLDELPGKTLLDDEGAAeLLALRGLAYLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLALAENRFDEARA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 526 RFEAILKANPKHLNamlaladlalrdkdetayvswqekaaaahpealqprvalaryqlakgdknkalatareaananpdn 605
Cdd:TIGR02917 181 LIDEVLTADPGNVD------------------------------------------------------------------ 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 606 paALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEI 685
Cdd:TIGR02917 195 --ALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFEEAEKHADALLKKAPNSPLAHYLKALVDF 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 686 QGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAhalepagmllvrqlqifnatqrteegEKRLa 765
Cdd:TIGR02917 273 QKKNYEDARETLQDALKSAPEYLPALLLAGASEYQLGNLEQAYQYLNQI--------------------------LKYA- 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 766 awlvdhPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVV 844
Cdd:TIGR02917 326 ------PNSHQARRLLASIQLRLGRVDEAIATLSPALGLDPDDPAALSLLGEAYLALGDfEKAAEYLAKATELDPENAAA 399
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 845 MDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLAS 905
Cdd:TIGR02917 400 RTQLGISKLSQGDPSEAIADLETAAQLDPELGRADLLLILSYLRSGQFDKALAAAKKLEKK 460
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
708-904 |
2.79e-19 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 93.13 E-value: 2.79e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 708 AAGFILEGDTALARKDYPAALAAFERAHALEPAGM----------LLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGT 777
Cdd:COG3914 1 AAAAALLALAALAAAALLAAAAAAELALAAELEAAalaaalglalLLLAALAEAAAAALLALAAGEAAAAAAALLLLAAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 778 RALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDTYGWILAQQG 856
Cdd:COG3914 81 LELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRlEEALAALRRALALNPDFAEAYLNLGEALRRLG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1308963986 857 QASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLA 904
Cdd:COG3914 161 RLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALE 208
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
685-924 |
2.41e-17 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 86.97 E-value: 2.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 685 IQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERA-HALEPAGMLLVRQLQIFNATQRTEEGEKR 763
Cdd:COG3914 21 AAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAaAALLLLAALLELAALLLQALGRYEEALAL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 764 LAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENP 842
Cdd:COG3914 101 YRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRlEEAIAALRRALELDPDNA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 843 VVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARgELERLLASGARFQQEPEARALLTQL 922
Cdd:COG3914 181 EALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYD-RFEELLAALARGPSELSPFALLYLP 259
|
..
gi 1308963986 923 QN 924
Cdd:COG3914 260 DD 261
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
236-500 |
2.99e-17 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 82.85 E-value: 2.99e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 236 RLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALG 315
Cdd:COG2956 11 WYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 316 NLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQA 395
Cdd:COG2956 91 LLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 396 AQHSPDNAAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALASIAALEKKQGADPLiWN 474
Cdd:COG2956 171 LKLDPDCARALLLLAELYLEQGDyEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDL-LL 249
|
250 260
....*....|....*....|....*.
gi 1308963986 475 YRGAAYLGKKDVVRARDSFSQALKLD 500
Cdd:COG2956 250 ALADLLERKEGLEAALALLERQLRRH 275
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
506-713 |
3.09e-17 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 86.59 E-value: 3.09e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 506 AAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLALRDKDETAY---------VSWQEKAAAAHPEALQPRV 576
Cdd:COG3914 3 AAALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAaaaallalaAGEAAAAAAALLLLAALLE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 577 ALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDL 656
Cdd:COG3914 83 LAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRL 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1308963986 657 PGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFIL 713
Cdd:COG3914 163 EEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSN 219
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
561-794 |
8.79e-17 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 85.04 E-value: 8.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 561 QEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQA 640
Cdd:COG3914 33 EAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNA 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 641 APLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALA 720
Cdd:COG3914 113 EALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQD 192
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 721 RKDYPAALAAFERAHALEP----AGMLLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAA 794
Cdd:COG3914 193 LGRLEEAIAAYRRALELDPdnadAHSNLLFALRQACDWEVYDRFEELLAALARGPSELSPFALLYLPDDDPAELLALA 270
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
576-908 |
1.26e-16 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 85.14 E-value: 1.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 576 VALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVER-------------------- 635
Cdd:TIGR02917 26 IEAAKSYLQKNKYKAAIIQLKNALQKDPNDAEARFLLGKIYLALGDYAAAEKELRKALSLgypknqvlpllarayllqgk 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 636 ---------------QPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQV 700
Cdd:TIGR02917 106 fqqvldelpgktlldDEGAAELLALRGLAYLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLALAENRFDEARALIDEV 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 701 QQQQPGKAAGFILEGDTALARKDYPAALAAFERAHALEP-AGMLLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGTRA 779
Cdd:TIGR02917 186 LTADPGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPnNIAVLLALATILIEAGEFEEAEKHADALLKKAPNSPLAHY 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 780 LLAESLIRRKQYAAATEHylvlnkrkpdnlvvlnnlawalnetgdkravsfAEQALKLQPENPVVMDTYGWILAQQGQAS 859
Cdd:TIGR02917 266 LKALVDFQKKNYEDARET---------------------------------LQDALKSAPEYLPALLLAGASEYQLGNLE 312
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1308963986 860 KGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLASGAR 908
Cdd:TIGR02917 313 QAYQYLNQILKYAPNSHQARRLLASIQLRLGRVDEAIATLSPALGLDPD 361
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
35-277 |
1.90e-16 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 83.89 E-value: 1.90e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 35 EAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAG---------YEENAVNPMIAR 105
Cdd:COG3914 7 LALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGeaaaaaaalLLLAALLELAAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 106 ALLGQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAM 185
Cdd:COG3914 87 LLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 186 QTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLAL--AGIALADDKLADARREVDAALQAS 263
Cdd:COG3914 167 AALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLlfALRQACDWEVYDRFEELLAALARG 246
|
250
....*....|....
gi 1308963986 264 PNNLQARYIQALID 277
Cdd:COG3914 247 PSELSPFALLYLPD 260
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
566-802 |
5.56e-15 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 75.81 E-value: 5.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 566 AAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVK 645
Cdd:COG0457 2 ELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 646 LASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYP 725
Cdd:COG0457 82 LGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYE 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1308963986 726 AALAAFERAHALEPAGMLLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLN 802
Cdd:COG0457 162 EALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAAL 238
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
688-904 |
8.35e-15 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 75.54 E-value: 8.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 688 GRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAHALEPAGMLLVRQL-QIFNATQRTEEGEKRLAA 766
Cdd:COG2956 22 GQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELaQDYLKAGLLDRAEELLEK 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 767 WLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVM 845
Cdd:COG2956 102 LLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDyDEAIEALEKALKLDPDCARAL 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1308963986 846 DTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLA 904
Cdd:COG2956 182 LLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALE 240
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
117-350 |
1.27e-14 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 78.11 E-value: 1.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 117 LDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDP 196
Cdd:COG3914 30 AELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNP 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 197 GHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALI 276
Cdd:COG3914 110 DNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 277 DFREKKTERARDRLAAVLKSAP-------NYLPALL-LGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRL 348
Cdd:COG3914 190 LQDLGRLEEAIAAYRRALELDPdnadahsNLLFALRqACDWEVYDRFEELLAALARGPSELSPFALLYLPDDDPAELLAL 269
|
..
gi 1308963986 349 GR 350
Cdd:COG3914 270 AR 271
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
145-730 |
2.55e-14 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 77.82 E-value: 2.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 145 GRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRiDPGHRDslllkadllratgkpvDAAAAYHD 224
Cdd:PRK11447 161 AQRPEAINQLQRLNADYPGNTGLRNTLALLLFSSGRRDEGFAVLEQMAK-SPAGRD----------------AAAQLWYG 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 225 VLK---VDPRHTNARLALAGIALADDKLADARREVDA--ALQASPNnLQARyIQALIDFREKKTERARDRLAAVLKSAPN 299
Cdd:PRK11447 224 QIKdmpVSDASVAALQKYLQVFSDGDSVAAARSQLAEqqKQLADPA-FRAR-AQGLAAVDSGQGGKAIPELQQAVRANPK 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 300 YLPALllgGSIEYAL---GNLQTAEAHLNKVAKATPNNLYALR---LLAATQ-----------LRLGRPDDAANTIAPAV 362
Cdd:PRK11447 302 DSEAL---GALGQAYsqqGDRARAVAQFEKALALDPHSSNRDKwesLLKVNRywlliqqgdaaLKANNLAQAERLYQQAR 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 363 RAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNA-AIRTELGISRlAQGDSRAMADLQTaadmegsssradtf 441
Cdd:PRK11447 379 QVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGNTnAVRGLANLYR-QQSPEKALAFIAS-------------- 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 442 iiLNQLRQQQFDAALASIAALEKKQGADPLiwnyrgaayLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPA 521
Cdd:PRK11447 444 --LSASQRRSIDDIERSLQNDRLAQQAEAL---------ENQGKWAQAAELQRQRLALDPGSVWLTYRLAQDLRQAGQRS 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 522 AARQRFEAILKANPKHLNAMLALAD-LALRDKDETAYVSWQEKAAA-------AHPEALQPRVALARYQL--AKGDKNKA 591
Cdd:PRK11447 513 QADALMRRLAQQKPNDPEQVYAYGLyLSGSDRDRAALAHLNTLPRAqwnsniqELAQRLQSDQVLETANRlrDSGKEAEA 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 592 LATAREaanaNPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQP 671
Cdd:PRK11447 593 EALLRQ----QPPSTRIDLTLADWAQQRGDYAAARAAYQRVLTREPGNADARLGLIEVDIAQGDLAAARAQLAKLPATAN 668
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1308963986 672 DWLDAQMMLGGVEIQGGRYDEAQ----KLAKQVQQQQPGKAAGFIL---------EGDTALARKDYPAALAA 730
Cdd:PRK11447 669 DSLNTQRRVALAWAALGDTAAAQrtfnRLIPQAKSQPPSMESALVLrdaarfeaqTGQPQQALETYKDAMVA 740
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
219-475 |
3.29e-14 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 76.96 E-value: 3.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 219 AAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAP 298
Cdd:COG3914 1 AAAAALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 299 NYLPALLLggsieYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEI 378
Cdd:COG3914 81 LELAALLL-----QALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 379 ALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALA 457
Cdd:COG3914 156 LRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRlEEAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYDR 235
|
250
....*....|....*...
gi 1308963986 458 SIAALEKKQGADPLIWNY 475
Cdd:COG3914 236 FEELLAALARGPSELSPF 253
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
217-465 |
4.72e-14 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 76.19 E-value: 4.72e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 217 DAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKS 296
Cdd:COG3914 28 LAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALAL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 297 APNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAG 376
Cdd:COG3914 108 NPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLG 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 377 EIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADLQTA-ADMEGSSSRADTFIILNQL---RQQQF 452
Cdd:COG3914 188 NALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYDRFEELlAALARGPSELSPFALLYLPdddPAELL 267
|
250
....*....|...
gi 1308963986 453 DAALASIAALEKK 465
Cdd:COG3914 268 ALARAWAQLVAAA 280
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
590-714 |
4.73e-14 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 69.65 E-value: 4.73e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 590 KALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRI 669
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1308963986 670 QPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILE 714
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLE 125
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
159-396 |
9.08e-14 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 71.96 E-value: 9.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 159 QVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLA 238
Cdd:COG0457 2 ELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 239 LAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQ 318
Cdd:COG0457 82 LGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYE 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 319 TAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAA 396
Cdd:COG0457 162 EALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALA 239
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
708-924 |
2.25e-13 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 71.30 E-value: 2.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 708 AAGFILEGDTALARKDYPAALAAFERAHALEPAGMLLVRQL-QIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLI 786
Cdd:COG2956 8 ALGWYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALgNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 787 RRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHL 865
Cdd:COG2956 88 KAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDwEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEAL 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1308963986 866 QKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLasgarfQQEPEARALLTQLQN 924
Cdd:COG2956 168 EKALKLDPDCARALLLLAELYLEQGDYEEAIAALERAL------EQDPDYLPALPRLAE 220
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
124-365 |
2.85e-13 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 70.42 E-value: 2.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 124 VASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLL 203
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 204 LKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKT 283
Cdd:COG0457 81 NLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 284 ERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVR 363
Cdd:COG0457 161 EEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALAL 240
|
..
gi 1308963986 364 AA 365
Cdd:COG0457 241 YQ 242
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
582-921 |
3.91e-13 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 73.96 E-value: 3.91e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 582 QLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKlverqpgqaaplvklasAQVAAKDLPGARK 661
Cdd:PRK11447 279 AVDSGQGGKAIPELQQAVRANPKDSEALGALGQAYSQQGDRARAVAQFEK-----------------ALALDPHSSNRDK 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 662 sLQDALRIQPDWLDAQMmlGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAHALEPAG 741
Cdd:PRK11447 342 -WESLLKVNRYWLLIQQ--GDAALKANNLAQAERLYQQARQVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGN 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 742 MLLVRQLQifnATQRTEEGEKRLaAWLVDHP-----QDAGTRALL--------AESLIRRKQYAAATEHYLVLNKRKPDN 808
Cdd:PRK11447 419 TNAVRGLA---NLYRQQSPEKAL-AFIASLSasqrrSIDDIERSLqndrlaqqAEALENQGKWAQAAELQRQRLALDPGS 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 809 LVVLNNLAWALNETGDK-RAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQkALSKAPDNAEIQyhlAVVLA 887
Cdd:PRK11447 495 VWLTYRLAQDLRQAGQRsQADALMRRLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLN-TLPRAQWNSNIQ---ELAQR 570
|
330 340 350
....*....|....*....|....*....|....
gi 1308963986 888 KTGDHTRARGelERLLASGarfqQEPEARALLTQ 921
Cdd:PRK11447 571 LQSDQVLETA--NRLRDSG----KEAEAEALLRQ 598
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
183-313 |
7.19e-13 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 66.57 E-value: 7.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 183 KAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQA 262
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 263 SPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYA 313
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIAEA 131
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
773-904 |
1.46e-12 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 65.60 E-value: 1.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 773 QDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDTYGWI 851
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDlDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1308963986 852 LAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLA 904
Cdd:COG4783 82 LLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALE 134
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
56-297 |
1.97e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 68.11 E-value: 1.97e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 56 VAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIARALLGQRDFERVLDELPAPVASDPATATLQA 135
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 136 LRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKP 215
Cdd:COG0457 81 NLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 216 VDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLK 295
Cdd:COG0457 161 EEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALAL 240
|
..
gi 1308963986 296 SA 297
Cdd:COG0457 241 YQ 242
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
607-896 |
2.32e-12 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 69.17 E-value: 2.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 607 AALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDW-LDAQMMLGGVEI 685
Cdd:COG3071 17 LAALLEGLLALAEGRYARAEKLLSKAAEHSEAPLLAYLLAARAAQALGDYERRDEYLAQALELAPEAeLAVLLTRAELLL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 686 QGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALA---AFERAHALEPAGMLLVRQLQIFNATQRTEEGEK 762
Cdd:COG3071 97 DQGQAEQALATLEALRAGAPRHPQVLRLLLQAYRQLGDWEELLEllpALRKHKALSAEEAQALERRAYLGLLRQAARDAE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 763 RLAAWLVDHP----QDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLnnlAWALNETGD-KRAVSFAEQALKL 837
Cdd:COG3071 177 ALKALWKALPraerRDPELAAAYARALIALGDHDEAERLLREALKRQWDPRLVR---LYGRLQGGDpAKQLKRAEKWLKK 253
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1308963986 838 QPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDnAEIQYHLAVVLAKTGDHTRAR 896
Cdd:COG3071 254 HPNDPDLLLALGRLCLRNQLWGKAREYLEAALALRPS-AEAYAELARLLEQLGDPEEAA 311
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
125-355 |
2.90e-12 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 70.41 E-value: 2.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 125 ASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLL 204
Cdd:COG3914 4 AALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 205 KADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTE 284
Cdd:COG3914 84 AALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLE 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 285 RARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAA 355
Cdd:COG3914 164 EAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYD 234
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
267-402 |
3.08e-12 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 64.83 E-value: 3.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 267 LQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQL 346
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALL 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1308963986 347 RLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDN 402
Cdd:COG4783 84 KAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
750-923 |
3.54e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 67.34 E-value: 3.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 750 IFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAV 828
Cdd:COG0457 17 AYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRyEEAL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 829 SFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLASGAR 908
Cdd:COG0457 97 EDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALA 176
|
170
....*....|....*
gi 1308963986 909 FQQEPEARALLTQLQ 923
Cdd:COG0457 177 ALLAAALGEAALALA 191
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
226-463 |
4.52e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 66.95 E-value: 4.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 226 LKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALL 305
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 306 LGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNF 385
Cdd:COG0457 81 NLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRY 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 386 AQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALASIAALE 463
Cdd:COG0457 161 EEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAAL 238
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
570-705 |
5.14e-12 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 64.06 E-value: 5.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 570 EALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASA 649
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1308963986 650 QVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQP 705
Cdd:COG4783 82 LLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDP 137
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
192-432 |
8.45e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 66.18 E-value: 8.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 192 LRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARY 271
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 272 IQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRP 351
Cdd:COG0457 81 NLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 352 DDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADLQTAADM 431
Cdd:COG0457 161 EEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALAL 240
|
.
gi 1308963986 432 E 432
Cdd:COG0457 241 Y 241
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
667-927 |
1.26e-11 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 65.80 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 667 LRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAHALEPagmllvr 746
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDP------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 747 qlqifnatqrteegekrlaawlvdhpQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-K 825
Cdd:COG0457 74 --------------------------DDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRyD 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 826 RAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLAS 905
Cdd:COG0457 128 EAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQAL 207
|
250 260
....*....|....*....|..
gi 1308963986 906 GARFQQEPEARALLTQLQNKAR 927
Cdd:COG0457 208 RKKLAILTLAALAELLLLALAL 229
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
562-766 |
2.61e-11 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 64.64 E-value: 2.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 562 EKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAA 641
Cdd:COG0457 32 EKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 642 PLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALAR 721
Cdd:COG0457 112 ALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALA 191
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1308963986 722 KDYPAALAAFERAHALEPAGMLLVRQLQIFNATQRTEEGEKRLAA 766
Cdd:COG0457 192 AAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLA 236
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
260-503 |
3.39e-11 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 64.26 E-value: 3.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 260 LQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALR 339
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 340 LLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDS 419
Cdd:COG0457 81 NLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 420 RAMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALKL 499
Cdd:COG0457 161 EEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALAL 240
|
....
gi 1308963986 500 DPAF 503
Cdd:COG0457 241 YQYR 244
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
188-428 |
6.38e-11 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 66.17 E-value: 6.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 188 LDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNL 267
Cdd:COG3914 33 EAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNA 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 268 QARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLR 347
Cdd:COG3914 113 EALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQD 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 348 LGRPDDAantIAPAVRAATGDPGVLLVAGEI--ALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADL 425
Cdd:COG3914 193 LGRLEEA---IAAYRRALELDPDNADAHSNLlfALRQACDWEVYDRFEELLAALARGPSELSPFALLYLPDDDPAELLAL 269
|
...
gi 1308963986 426 QTA 428
Cdd:COG3914 270 ARA 272
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
165-300 |
7.83e-11 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 60.98 E-value: 7.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 165 AEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIAL 244
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALL 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1308963986 245 ADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNY 300
Cdd:COG4783 84 KAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
5-255 |
8.40e-11 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 65.78 E-value: 8.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 5 RPARRLLPVLMLGASLLTACGGQDSTTLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEK 84
Cdd:COG3914 54 AAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALA 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 85 EFRRAreagyeenavnpmiarallgqrdfervldelpapVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGN 164
Cdd:COG3914 134 ALRRA----------------------------------LALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDN 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 165 AEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKpVDAAAAYHDVLKVDPRHTNARLALAGIAL 244
Cdd:COG3914 180 AEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACD-WEVYDRFEELLAALARGPSELSPFALLYL 258
|
250
....*....|.
gi 1308963986 245 ADDKLADARRE 255
Cdd:COG3914 259 PDDDPAELLAL 269
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
149-277 |
9.10e-11 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 60.40 E-value: 9.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 149 DARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKV 228
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1308963986 229 DPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALID 277
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIA 129
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
117-245 |
9.10e-11 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 60.40 E-value: 9.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 117 LDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDP 196
Cdd:COG4235 3 IARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDP 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1308963986 197 GHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALA 245
Cdd:COG4235 83 DNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIAEA 131
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
375-656 |
1.32e-10 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 65.01 E-value: 1.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 375 AGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQG----------DSRAMADLQTAADMEGSSSRADTFIIL 444
Cdd:COG3914 7 LALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAalaeaaaaalLALAAGEAAAAAAALLLLAALLELAAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 445 NQLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAAR 524
Cdd:COG3914 87 LLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 525 QRFEAILKANPKhlnamlaladlalrdkdetayvswqekaaaaHPEALQprvALARYQLAKGDKNKALATAREAANANPD 604
Cdd:COG3914 167 AALRRALELDPD-------------------------------NAEALN---NLGNALQDLGRLEEAIAAYRRALELDPD 212
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1308963986 605 NPAALDLLGSTQLALGDTTNA--LGSYRKLVERQPGQAAPLVKLASAQVAAKDL 656
Cdd:COG3914 213 NADAHSNLLFALRQACDWEVYdrFEELLAALARGPSELSPFALLYLPDDDPAEL 266
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
759-877 |
1.63e-10 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 59.63 E-value: 1.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 759 EGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKL 837
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDtEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1308963986 838 QPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAE 877
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAP 120
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
36-195 |
2.30e-10 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 62.44 E-value: 2.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 36 AQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIARALLGQRDFER 115
Cdd:COG2956 117 AEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEE 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 116 VLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAeVHLALAQLALADGDADKAMQTLDQALRID 195
Cdd:COG2956 197 AIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDD-LLLALADLLERKEGLEAALALLERQLRRH 275
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
129-266 |
3.06e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 59.05 E-value: 3.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 129 ATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADL 208
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 209 LRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNN 266
Cdd:COG4783 82 LLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
469-699 |
3.35e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 61.56 E-value: 3.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 469 DPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLA 548
Cdd:COG0457 7 DAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 549 LRDKDETAYVSWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGS 628
Cdd:COG0457 87 QALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALEL 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 629 YRKLVERQpGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQ 699
Cdd:COG0457 167 LEKLEAAA-LAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLA 236
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
376-601 |
4.68e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 61.18 E-value: 4.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 376 GEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRADTFIILNQLRQQQFDA 454
Cdd:COG0457 15 GLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRyEEALADYEQALELDPDDAEALNNLGLALQALGRYEE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 455 ALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKAN 534
Cdd:COG0457 95 ALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1308963986 535 PKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANA 601
Cdd:COG0457 175 LAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALALY 241
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
102-232 |
1.05e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 57.51 E-value: 1.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 102 MIARALLGQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDA 181
Cdd:COG4783 9 ALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDY 88
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 182 DKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRH 232
Cdd:COG4783 89 DEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
235-365 |
1.29e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 57.51 E-value: 1.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 235 ARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYAL 314
Cdd:COG4783 6 ALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKA 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 315 GNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAA 365
Cdd:COG4783 86 GDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELD 136
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
803-922 |
1.38e-09 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 56.94 E-value: 1.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 803 KRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYH 881
Cdd:COG4235 11 AANPNDAEGWLLLGRAYLRLGRyDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYL 90
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1308963986 882 LAVVLAKTGDHTRARGELERLLASGARFQQEPEARALLTQL 922
Cdd:COG4235 91 LGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIAEA 131
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
35-437 |
1.45e-09 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 62.02 E-value: 1.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 35 EAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAgyEENAVNPMIARALLGQRDFE 114
Cdd:PRK11447 275 QGLAAVDSGQGGKAIPELQQAVRANPKDSEALGALGQAYSQQGDRARAVAQFEKALAL--DPHSSNRDKWESLLKVNRYW 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 115 RVLDElpapvasdpatatlqalrATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRI 194
Cdd:PRK11447 353 LLIQQ------------------GDAALKANNLAQAERLYQQARQVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRM 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 195 DPGHRDSLLLKADLLRAtgKPVDAAAAYHDVLKVDPRHT---------NARLALAGIALAD-DKLADARREVDAALQASP 264
Cdd:PRK11447 415 DPGNTNAVRGLANLYRQ--QSPEKALAFIASLSASQRRSiddierslqNDRLAQQAEALENqGKWAQAAELQRQRLALDP 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 265 NN--LQARYIQALI-DFREKKTERARDRLAAVLKSAP--NYLPALLLGGSieyalGNLQTAEAHLNKVAKATPN-NLYAL 338
Cdd:PRK11447 493 GSvwLTYRLAQDLRqAGQRSQADALMRRLAQQKPNDPeqVYAYGLYLSGS-----DRDRAALAHLNTLPRAQWNsNIQEL 567
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 339 ------RLLAATQLRLGRPDDAANTIApAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGIS 412
Cdd:PRK11447 568 aqrlqsDQVLETANRLRDSGKEAEAEA-LLRQQPPSTRIDLTLADWAQQRGDYAAARAAYQRVLTREPGNADARLGLIEV 646
|
410 420
....*....|....*....|....*....
gi 1308963986 413 RLAQGDSRA----MADLQTAADMEGSSSR 437
Cdd:PRK11447 647 DIAQGDLAAaraqLAKLPATANDSLNTQR 675
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
26-164 |
2.36e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 56.74 E-value: 2.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 26 GQDSTTLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIAR 105
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1308963986 106 ALLGQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGN 164
Cdd:COG4783 81 ALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
607-739 |
2.84e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 56.35 E-value: 2.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 607 AALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQ 686
Cdd:COG4783 5 EALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLK 84
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1308963986 687 GGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAHALEP 739
Cdd:COG4783 85 AGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDP 137
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
301-418 |
3.01e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 56.35 E-value: 3.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 301 LPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIAL 380
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALL 83
|
90 100 110
....*....|....*....|....*....|....*...
gi 1308963986 381 AQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGD 418
Cdd:COG4783 84 KAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGR 121
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
200-334 |
3.48e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 55.97 E-value: 3.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 200 DSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFR 279
Cdd:COG4783 5 EALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLK 84
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1308963986 280 EKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNN 334
Cdd:COG4783 85 AGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
562-672 |
7.74e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 55.20 E-value: 7.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 562 EKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAA 641
Cdd:COG4783 28 EKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPE 107
|
90 100 110
....*....|....*....|....*....|.
gi 1308963986 642 PLVKLASAQVAAKDLPGARKSLQDALRIQPD 672
Cdd:COG4783 108 AYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
756-875 |
9.03e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 54.81 E-value: 9.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 756 RTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQA 834
Cdd:COG4783 19 DYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDyDEALALLEKA 98
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1308963986 835 LKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDN 875
Cdd:COG4783 99 LKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
285-406 |
9.08e-09 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 54.63 E-value: 9.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 285 RARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRA 364
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1308963986 365 ATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIR 406
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPAR 122
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
122-739 |
1.31e-08 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 58.94 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 122 APVASDPATATlQALRATAQLG--LGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGH- 198
Cdd:PRK11447 18 LPLAQAAPTAQ-QQLLEQVRLGeaTHREDLVRQSLYRLELIDPNNPDVIAARFRLLLRQGDSDGAQKLLDRLSQLAPDSn 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 199 -----RDSLLL----------KADLLRATGKPVDAAAAYHDVLKVDPrhTNARLALAGIALADdKLADARREVDAALQA- 262
Cdd:PRK11447 97 ayrssRTTMLLstpegrqalqQARLLATTGRTEEALASYDKLFNGAP--PELDLAVEYWRLVA-KLPAQRPEAINQLQRl 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 263 ---SPNNLQARYIQALIDFREKKTERARDRLAAVLKSapnylPAlllggsieyalGNLQTAEAHLNKVAK--ATPNNLYA 337
Cdd:PRK11447 174 nadYPGNTGLRNTLALLLFSSGRRDEGFAVLEQMAKS-----PA-----------GRDAAAQLWYGQIKDmpVSDASVAA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 338 L-RLLaaTQLRLGRPDDAANTIAPAVRAATGDPgvLLVAGEIALAQ---KNFAQASAYFEQAAQHSPDNAAIRTELGISR 413
Cdd:PRK11447 238 LqKYL--QVFSDGDSVAAARSQLAEQQKQLADP--AFRARAQGLAAvdsGQGGKAIPELQQAVRANPKDSEALGALGQAY 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 414 LAQGD-SRAMADLQTAADMEGSS---SRADTFIILNQ--LRQQQFDAALASiaalekkqgadpliwnyrgaaylgkKDVV 487
Cdd:PRK11447 314 SQQGDrARAVAQFEKALALDPHSsnrDKWESLLKVNRywLLIQQGDAALKA-------------------------NNLA 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 488 RARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLALRDKDETAYV------SWQ 561
Cdd:PRK11447 369 QAERLYQQARQVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGNTNAVRGLANLYRQQSPEKALAfiaslsASQ 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 562 EKAAAAHPEALQprvaLARYQ------LAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVER 635
Cdd:PRK11447 449 RRSIDDIERSLQ----NDRLAqqaealENQGKWAQAAELQRQRLALDPGSVWLTYRLAQDLRQAGQRSQADALMRRLAQQ 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 636 QPGQAAPLV------------KLASAQVAAkdLPGARKSlqDALRIQPDWLDAQMMLGGVEIQGGRYDEAQklAKQVQQQ 703
Cdd:PRK11447 525 KPNDPEQVYayglylsgsdrdRAALAHLNT--LPRAQWN--SNIQELAQRLQSDQVLETANRLRDSGKEAE--AEALLRQ 598
|
650 660 670
....*....|....*....|....*....|....*.
gi 1308963986 704 QPGKAAGFILEGDTALARKDYPAALAAFERAHALEP 739
Cdd:PRK11447 599 QPPSTRIDLTLADWAQQRGDYAAARAAYQRVLTREP 634
|
|
| COG4700 |
COG4700 |
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown]; |
748-908 |
1.35e-08 |
|
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown];
Pssm-ID: 443735 [Multi-domain] Cd Length: 249 Bit Score: 56.81 E-value: 1.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 748 LQIFNATQRTEEGEKRLAawlvdhpqDAGT---RALLAESLIRRKQYAAATEHYL-VLNKRKPDNLVVLNNLAWALNETG 823
Cdd:COG4700 67 RNALDPGRELRELEKALE--------FADTvqnRVRLADALLELGRYDEAIELYEeALTGIFADDPHILLGLAQALFELG 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 824 D-KRAVSFAEQALKLQPE--NPVVMDTYGWILAQQGQASKGLPHLQKALSKAPdNAEIQYHLAVVLAKTGDHTRARGELE 900
Cdd:COG4700 139 RyAEALETLEKLIAKNPDfkSSDAHLLYARALEALGDLEAAEAELEALARRYS-GPEARYRYAKFLARQGRTAEAKELLE 217
|
....*...
gi 1308963986 901 RLLASGAR 908
Cdd:COG4700 218 EILDEAKH 225
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
26-369 |
2.40e-08 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 58.17 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 26 GQDSTTLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSD----------LASAEKEFRRAREAgyE 95
Cdd:PRK11447 382 NTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGNTNAVRGLANLYRQQSPekalafiaslSASQRRSIDDIERS--L 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 96 ENAVNPMIARALLGQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAE-VHLALAQL 174
Cdd:PRK11447 460 QNDRLAQQAEALENQGKWAQAAELQRQRLALDPGSVWLTYRLAQDLRQAGQRSQADALMRRLAQQKPNDPEqVYAYGLYL 539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 175 ALADGDA--------------DKAMQTLDQALRidpghRDSLLLKADLLRATGKPVDAAAAyhdvLKVDPRHTNARLALA 240
Cdd:PRK11447 540 SGSDRDRaalahlntlpraqwNSNIQELAQRLQ-----SDQVLETANRLRDSGKEAEAEAL----LRQQPPSTRIDLTLA 610
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 241 GIALADDKLADARREVDAALQASPNNLQARY--IQALIdfrekkterardrlaavlksapnylpalllggsieyALGNLQ 318
Cdd:PRK11447 611 DWAQQRGDYAAARAAYQRVLTREPGNADARLglIEVDI------------------------------------AQGDLA 654
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 319 TAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDP 369
Cdd:PRK11447 655 AARAQLAKLPATANDSLNTQRRVALAWAALGDTAAAQRTFNRLIPQAKSQP 705
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
320-438 |
2.98e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 53.09 E-value: 2.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 320 AEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHS 399
Cdd:COG4235 2 AIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALD 81
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1308963986 400 PDNAAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRA 438
Cdd:COG4235 82 PDNPEALYLLGLAAFQQGDyAEAIAAWQKLLALLPADAPA 121
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
638-774 |
6.70e-08 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 52.50 E-value: 6.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 638 GQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDT 717
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 718 ALARKDYPAALAAFERAHALEPAGMLLVRQL-QIFNATQRTEEGEKRLAAWLVDHPQD 774
Cdd:COG4783 82 LLKAGDYDEALALLEKALKLDPEHPEAYLRLaRAYRALGRPDEAIAALEKALELDPDD 139
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
400-636 |
6.84e-08 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 54.63 E-value: 6.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 400 PDNAAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALASIAALEKKQGADPLIWNYRGA 478
Cdd:COG0457 5 PDDAEAYNNLGLAYRRLGRyEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 479 AYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLALRDKDETAYV 558
Cdd:COG0457 85 ALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEAL 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 559 SWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQ 636
Cdd:COG0457 165 ELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALALYQ 242
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
217-334 |
7.46e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 51.93 E-value: 7.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 217 DAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKS 296
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 1308963986 297 APNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNN 334
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPAD 118
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
179-268 |
8.51e-08 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 50.94 E-value: 8.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 179 GDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPvDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDA 258
Cdd:COG3063 6 GDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRY-DEAIALEKALKLDPNNAEALLNLAELLLELGDYDEALAYLER 84
|
90
....*....|
gi 1308963986 259 ALQASPNNLQ 268
Cdd:COG3063 85 ALELDPSALR 94
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
562-672 |
8.96e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 51.93 E-value: 8.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 562 EKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAA 641
Cdd:COG4235 7 RQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPE 86
|
90 100 110
....*....|....*....|....*....|.
gi 1308963986 642 PLVKLASAQVAAKDLPGARKSLQDALRIQPD 672
Cdd:COG4235 87 ALYLLGLAAFQQGDYAEAIAAWQKLLALLPA 117
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
825-911 |
1.69e-07 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 49.78 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 825 KRAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPhLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLA 904
Cdd:COG3063 9 EEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEALAYLERALE 87
|
....*..
gi 1308963986 905 SGARFQQ 911
Cdd:COG3063 88 LDPSALR 94
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
505-639 |
1.97e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 50.96 E-value: 1.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 505 PAAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQPRVALARYQLA 584
Cdd:COG4783 5 EALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLK 84
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1308963986 585 KGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQ 639
Cdd:COG4783 85 AGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
251-381 |
2.18e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 50.77 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 251 DARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKA 330
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 331 TPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALA 381
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIAEA 131
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
255-528 |
2.48e-07 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 54.60 E-value: 2.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 255 EVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNN 334
Cdd:TIGR00990 285 ELDEETGNGQLQLGLKSPESKADESYEEAARAFEKALDLGKLGEKEAIALNLRGTFKCLKGKHLEALADLSKSIELDPRV 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 335 LYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRL 414
Cdd:TIGR00990 365 TQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQY 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 415 AQGD--------SRAMADLQTAADMEGSSSRadtfIILNQLRQQ----QFDAALasiaALEKK-----QGADPLIwNYRG 477
Cdd:TIGR00990 445 KEGSiassmatfRRCKKNFPEAPDVYNYYGE----LLLDQNKFDeaieKFDTAI----ELEKEtkpmyMNVLPLI-NKAL 515
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 478 AAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFE 528
Cdd:TIGR00990 516 ALFQWKQDFIEAENLCEKALIIDPECDIAVATMAQLLLQQGDVDEALKLFE 566
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
371-584 |
2.59e-07 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 52.61 E-value: 2.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 371 VLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADLQTAADMEGSSSRADTFIILNQLRQQ 450
Cdd:COG4785 8 LLLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 451 QFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAI 530
Cdd:COG4785 88 DYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKA 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1308963986 531 LKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQPRVALARYQLA 584
Cdd:COG4785 168 LELDPNDPERALWLYLAERKLDPEKALALLLEDWATAYLLQGDTEEARELFKLA 221
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
21-157 |
2.72e-07 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 53.19 E-value: 2.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 21 LTACGGQDSTTLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVN 100
Cdd:COG2956 136 LLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPAL 215
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1308963986 101 PMIARALLGQRDFERVLDELPAPVASDPATATLQALrATAQLGLGRKEDARKTLQQA 157
Cdd:COG2956 216 PRLAELYEKLGDPEEALELLRKALELDPSDDLLLAL-ADLLERKEGLEAALALLERQ 271
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
27-224 |
3.41e-07 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 52.32 E-value: 3.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 27 QDSTTLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIARA 106
Cdd:COG0457 40 DDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 107 LLGQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQ 186
Cdd:COG0457 120 LLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLAL 199
|
170 180 190
....*....|....*....|....*....|....*...
gi 1308963986 187 TLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHD 224
Cdd:COG0457 200 LLALEQALRKKLAILTLAALAELLLLALALLLALRLAA 237
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
47-166 |
5.05e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 49.62 E-value: 5.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 47 AAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIARALLGQRDFERVLDELPAPVAS 126
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1308963986 127 DPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAE 166
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAP 120
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
785-874 |
2.01e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 46.70 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 785 LIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGDKRAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPH 864
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIALEKALKLDPNNAEALLNLAELLLELGDYDEALAY 81
|
90
....*....|
gi 1308963986 865 LQKALSKAPD 874
Cdd:COG3063 82 LERALELDPS 91
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
125-401 |
3.42e-06 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 49.91 E-value: 3.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 125 ASDPATATLQALRAtAQlGLGRKEDARKTLQQAQQVAPGNAE-VHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLL 203
Cdd:COG3071 46 SEAPLLAYLLAARA-AQ-ALGDYERRDEYLAQALELAPEAELaVLLTRAELLLDQGQAEQALATLEALRAGAPRHPQVLR 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 204 LKADLLRATGKPVDA---------AAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPnNLQARYIQA 274
Cdd:COG3071 124 LLLQAYRQLGDWEELlellpalrkHKALSAEEAQALERRAYLGLLRQAARDAEALKALWKALPRAERRDP-ELAAAYARA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 275 LIDFREkkTERARDRLAAVLKSAPNYLPALLLGgsiEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDA 354
Cdd:COG3071 203 LIALGD--HDEAERLLREALKRQWDPRLVRLYG---RLQGGDPAKQLKRAEKWLKKHPNDPDLLLALGRLCLRNQLWGKA 277
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1308963986 355 ANTIAPAVRAAtGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPD 401
Cdd:COG3071 278 REYLEAALALR-PSAEAYAELARLLEQLGDPEEAAEHYRKALALALG 323
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
692-808 |
3.54e-06 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 47.31 E-value: 3.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 692 EAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAHALEPA-GMLLVRQLQIFNATQRTEEGEKRLAAWLVD 770
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDnADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 1308963986 771 HPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDN 808
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPAD 118
|
|
| YfgM |
COG2976 |
Putative negative regulator of RcsB-dependent stress response, UPF0070 family [Signal ... |
615-750 |
7.48e-06 |
|
Putative negative regulator of RcsB-dependent stress response, UPF0070 family [Signal transduction mechanisms];
Pssm-ID: 442215 [Multi-domain] Cd Length: 207 Bit Score: 47.93 E-value: 7.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 615 TQLALGDTTNALGSYRKLVERQPG----QAAPLVkLASAQVAAKDLPGARKSLQDALRIQPDWLD---AQMMLGGVEIQG 687
Cdd:COG2976 62 EALAAGDAAAAAAAAEKLIDDYGGtayaALAALL-LAKAAVDAGDLDKAAAQLQWVLDNAKDPALkalARLRLARVLLAQ 140
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1308963986 688 GRYDEAQKLAKQVQqqqPGKAAGFILE--GDTALARKDYPAALAAFERAHALEPAGMLLVRQLQI 750
Cdd:COG2976 141 KKYDEALATLDAVK---PEAFAALYAElrGDILLAQGDKAEARAAYQKALAALPEDAPLRQLLQM 202
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
581-675 |
9.02e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 45.16 E-value: 9.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 581 YQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALgSYRKLVERQPGQAAPLVKLASAQVAAKDLPGAR 660
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|....*
gi 1308963986 661 KSLQDALRIQPDWLD 675
Cdd:COG3063 80 AYLERALELDPSALR 94
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
140-231 |
9.11e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 45.16 E-value: 9.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 140 AQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQtLDQALRIDPGHRDSLLLKADLLRATGKPVDAA 219
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|..
gi 1308963986 220 AAYHDVLKVDPR 231
Cdd:COG3063 80 AYLERALELDPS 91
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
826-904 |
9.19e-06 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 46.15 E-value: 9.19e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1308963986 826 RAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLA 904
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALA 79
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
649-740 |
9.29e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 45.16 E-value: 9.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 649 AQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLaKQVQQQQPGKAAGFILEGDTALARKDYPAAL 728
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIAL-EKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|..
gi 1308963986 729 AAFERAHALEPA 740
Cdd:COG3063 80 AYLERALELDPS 91
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
447-570 |
1.11e-05 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 45.95 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 447 LRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQR 526
Cdd:COG4783 15 LLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEALAL 94
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1308963986 527 FEAILKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPE 570
Cdd:COG4783 95 LEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
446-536 |
1.17e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 45.77 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 446 QLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQ 525
Cdd:COG4235 27 YLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQGDYAEAIA 106
|
90
....*....|.
gi 1308963986 526 RFEAILKANPK 536
Cdd:COG4235 107 AWQKLLALLPA 117
|
|
| type_IV_pilW |
TIGR02521 |
type IV pilus biogenesis/stability protein PilW; Members of this family are designated PilF ... |
769-927 |
1.17e-05 |
|
type IV pilus biogenesis/stability protein PilW; Members of this family are designated PilF and PilW. This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain.
Pssm-ID: 131573 [Multi-domain] Cd Length: 234 Bit Score: 47.72 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 769 VDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDT 847
Cdd:TIGR02521 25 TDRNKAAKIRVQLALGYLEQGDLEVAKENLDKALEHDPDDYLAYLALALYYQQLGElEKAEDSFRRALTLNPNNGDVLNN 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 848 YGWILAQQGQASKGLPHLQKALS--KAPDNAEIQYHLAVVLAKTGDHTRARGELERLLASGARFqqePEARALLTQLQNK 925
Cdd:TIGR02521 105 YGTFLCQQGKYEQAMQQFEQAIEdpLYPQPARSLENAGLCALKAGDFDKAEKYLTRALQIDPQR---PESLLELAELYYL 181
|
..
gi 1308963986 926 AR 927
Cdd:TIGR02521 182 RG 183
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
397-840 |
1.57e-05 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 48.93 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 397 QHSPDNAAIRTELGISRLAQGDSRAMADL--QTAADMEGSSSRADtfIILNQLRQQQFDAAlaSIAALEKkqgadpliwn 474
Cdd:PRK11447 175 ADYPGNTGLRNTLALLLFSSGRRDEGFAVleQMAKSPAGRDAAAQ--LWYGQIKDMPVSDA--SVAALQK---------- 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 475 yrgaaYLGK----KDVVRARDSFSQALKL--DPAFFPAAANLAQLDlkDKQPAAARQRFEAILKANPKHLNAMLALADLA 548
Cdd:PRK11447 241 -----YLQVfsdgDSVAAARSQLAEQQKQlaDPAFRARAQGLAAVD--SGQGGKAIPELQQAVRANPKDSEALGALGQAY 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 549 LRDKDETAYVSWQEKAAAAHPEAL-----QPRVALARYQLA--KGDK-----NKALATA--REAANANPDNPAALDLLGS 614
Cdd:PRK11447 314 SQQGDRARAVAQFEKALALDPHSSnrdkwESLLKVNRYWLLiqQGDAalkanNLAQAERlyQQARQVDNTDSYAVLGLGD 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 615 TQLALGDTTNALGSYRKLVERQPGQAAPLVKLAS---AQVAAK------DLPGA--------RKSLQ-DALRIQPDWLDA 676
Cdd:PRK11447 394 VAMARKDYAAAERYYQQALRMDPGNTNAVRGLANlyrQQSPEKalafiaSLSASqrrsiddiERSLQnDRLAQQAEALEN 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 677 Q------------------------MMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAA-----GFILEG----DTALARkd 723
Cdd:PRK11447 474 QgkwaqaaelqrqrlaldpgsvwltYRLAQDLRQAGQRSQADALMRRLAQQKPNDPEqvyayGLYLSGsdrdRAALAH-- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 724 ypaaLAAFERA------HALEPAgmlLVRQLQIFNATQRTEEGEKRLA-AWLVDHPQDAGTRALLAESLIRRKQYAAATE 796
Cdd:PRK11447 552 ----LNTLPRAqwnsniQELAQR---LQSDQVLETANRLRDSGKEAEAeALLRQQPPSTRIDLTLADWAQQRGDYAAARA 624
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 1308963986 797 HYLVLNKRKPDNLVVLNNLAWALNETGDKRAvsfAEQALKLQPE 840
Cdd:PRK11447 625 AYQRVLTREPGNADARLGLIEVDIAQGDLAA---ARAQLAKLPA 665
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
269-399 |
1.70e-05 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 47.98 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 269 ARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAA-TQLR 347
Cdd:COG3071 18 AALLEGLLALAEGRYARAEKLLSKAAEHSEAPLLAYLLAARAAQALGDYERRDEYLAQALELAPEAELAVLLTRAeLLLD 97
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1308963986 348 LGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHS 399
Cdd:COG3071 98 QGQAEQALATLEALRAGAPRHPQVLRLLLQAYRQLGDWEELLELLPALRKHK 149
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
763-905 |
2.03e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 45.72 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 763 RLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPEN 841
Cdd:COG5010 8 DRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDfEESLALLEQALQLDPNN 87
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1308963986 842 PVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLAS 905
Cdd:COG5010 88 PELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGT 151
|
|
| PRK11788 |
PRK11788 |
tetratricopeptide repeat protein; Provisional |
227-431 |
2.07e-05 |
|
tetratricopeptide repeat protein; Provisional
Pssm-ID: 236983 [Multi-domain] Cd Length: 389 Bit Score: 47.88 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 227 KVDPRHTNARLA-----LAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYL 301
Cdd:PRK11788 169 KLGGDSLRVEIAhfyceLAQQALARGDLDAARALLKKALAADPQCVRASILLGDLALAQGDYAAAIEALERVEEQDPEYL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 302 PalllggsieyalgnlqtaeahlnkvakatpnnLYALRLLAATQlRLGRPDDAANTIAPAVRAATGdPGVLLVAGEIALA 381
Cdd:PRK11788 249 S--------------------------------EVLPKLMECYQ-ALGDEAEGLEFLRRALEEYPG-ADLLLALAQLLEE 294
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1308963986 382 QKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADLQTAADM 431
Cdd:PRK11788 295 QEGPEAAQALLREQLRRHPSLRGFHRLLDYHLAEAEEGRAKESLLLLRDL 344
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
57-279 |
2.14e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 46.83 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 57 AEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIARAllgqRDFERVLDELPAPVASDPATATLQAL 136
Cdd:COG4785 3 ALALALLLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAA----LAAAALAAERIDRALALPDLAQLYYE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 137 RATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPV 216
Cdd:COG4785 79 RGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYE 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1308963986 217 DAAAAYHDVLKVDPRHTNARLALAGIALADDklADARREVDAALQASPNNLQARYIQALIDFR 279
Cdd:COG4785 159 LAIADLEKALELDPNDPERALWLYLAERKLD--PEKALALLLEDWATAYLLQGDTEEARELFK 219
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
403-537 |
2.29e-05 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 45.18 E-value: 2.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 403 AAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRADTFIILNQLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYL 481
Cdd:COG4783 4 AEALYALAQALLLAGDyDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALL 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1308963986 482 GKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKH 537
Cdd:COG4783 84 KAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
706-841 |
4.94e-05 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 44.03 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 706 GKAAGFILEGDTALARKDYPAALAAFERAHALEPAGMLLVRQL-QIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAES 784
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLgEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 785 LIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPEN 841
Cdd:COG4783 82 LLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRpDEAIAALEKALELDPDD 139
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
310-401 |
5.65e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 42.85 E-value: 5.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 310 IEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANtIAPAVRAATGDPGVLLVAGEIALAQKNFAQAS 389
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|..
gi 1308963986 390 AYFEQAAQHSPD 401
Cdd:COG3063 80 AYLERALELDPS 91
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
564-734 |
5.82e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 45.29 E-value: 5.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 564 AAAAHPEALQPRVALARYQLAKGDKNKALATAREAAN------ANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQP 637
Cdd:COG4785 25 LLAALLFAAVLALAIALADLALALAAAALAAAALAAEridralALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDP 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 638 GQAAPLVKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDt 717
Cdd:COG4785 105 DLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERALWLYL- 183
|
170
....*....|....*..
gi 1308963986 718 ALARKDYPAALAAFERA 734
Cdd:COG4785 184 AERKLDPEKALALLLED 200
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
827-880 |
7.23e-05 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 45.70 E-value: 7.23e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1308963986 827 AVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAPDNAEIQY 880
Cdd:cd24142 19 ALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIELDPDGGYEKY 72
|
|
| type_IV_pilW |
TIGR02521 |
type IV pilus biogenesis/stability protein PilW; Members of this family are designated PilF ... |
301-528 |
7.82e-05 |
|
type IV pilus biogenesis/stability protein PilW; Members of this family are designated PilF and PilW. This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain.
Pssm-ID: 131573 [Multi-domain] Cd Length: 234 Bit Score: 45.02 E-value: 7.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 301 LPALLLGGSIEYALGNLQTAEAHlNKVAKATPNnlyalrlLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIAL 380
Cdd:TIGR02521 5 FLLALTGCVTTPDVPRSSRTTDR-NKAAKIRVQ-------LALGYLEQGDLEVAKENLDKALEHDPDDYLAYLALALYYQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 381 AQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGD-SRAMADLQTAADMEGSSSRADTF--IILNQLRQQQFDaala 457
Cdd:TIGR02521 77 QLGELEKAEDSFRRALTLNPNNGDVLNNYGTFLCQQGKyEQAMQQFEQAIEDPLYPQPARSLenAGLCALKAGDFD---- 152
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 458 siaalekkqgadpliwnyrgaaylgkkdvvRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFE 528
Cdd:TIGR02521 153 ------------------------------KAEKYLTRALQIDPQRPESLLELAELYYLRGQYKDARAYLE 193
|
|
| HemYx |
COG3898 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to HemY-type ... |
583-736 |
1.05e-04 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to HemY-type protoporphyrinogen oxidase) [Function unknown];
Pssm-ID: 443105 [Multi-domain] Cd Length: 468 Bit Score: 45.65 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 583 LAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNAL-----GSYRKLVERQPG---QAAPLVKLAsAQVAAK 654
Cdd:COG3898 163 LRRGDTEAALALAEEALALAPKLPWAQDALLELQAAAGDWDGALatldaALKAGLLDKDVArrrRAVLLTARA-RELEEG 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 655 DLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQP----GKAAGFILEGDTALARKDYPAALAA 730
Cdd:COG3898 242 DPDEARELAIEALKLAPDLVPAAVLAARLLIAQGKLRKAAKVLEKAWRAQPhpdlAAAYAELRPGDSALDRLKRAETLAA 321
|
....*.
gi 1308963986 731 FERAHA 736
Cdd:COG3898 322 LNPDHP 327
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
446-536 |
1.69e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 41.31 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 446 QLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYLGKKDVVRARDsFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQ 525
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEALA 80
|
90
....*....|.
gi 1308963986 526 RFEAILKANPK 536
Cdd:COG3063 81 YLERALELDPS 91
|
|
| YfgM |
COG2976 |
Putative negative regulator of RcsB-dependent stress response, UPF0070 family [Signal ... |
259-409 |
2.22e-04 |
|
Putative negative regulator of RcsB-dependent stress response, UPF0070 family [Signal transduction mechanisms];
Pssm-ID: 442215 [Multi-domain] Cd Length: 207 Bit Score: 43.31 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 259 ALQASpnnlqARYIQALIDFREKKTERARDRLAAVLKSAP--NYLP-ALLLGGSIEYALGNLQTAEAHLNKVAKATPNN- 334
Cdd:COG2976 50 AEEAS-----ALYEQLLEALAAGDAAAAAAAAEKLIDDYGgtAYAAlAALLLAKAAVDAGDLDKAAAQLQWVLDNAKDPa 124
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 335 ---LYALRLlAATQLRLGRPDDAANTIAPAVRAATgDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTEL 409
Cdd:COG2976 125 lkaLARLRL-ARVLLAQKKYDEALATLDAVKPEAF-AALYAELRGDILLAQGDKAEARAAYQKALAALPEDAPLRQLL 200
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
96-292 |
2.38e-04 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 43.75 E-value: 2.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 96 ENAVNPMIARALLGQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARktlqqaqQVAPGNAEVHLALAQLA 175
Cdd:COG4785 11 ALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRA-------LALPDLAQLYYERGVAY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 176 LADGDADKAMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARRE 255
Cdd:COG4785 84 DSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIAD 163
|
170 180 190
....*....|....*....|....*....|....*..
gi 1308963986 256 VDAALQASPNNLQARYIQALIDfREKKTERARDRLAA 292
Cdd:COG4785 164 LEKALELDPNDPERALWLYLAE-RKLDPEKALALLLE 199
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
522-641 |
2.64e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 41.92 E-value: 2.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 522 AARQRFEAILKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANA 601
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1308963986 602 NPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAA 641
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAP 120
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
208-301 |
3.90e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 40.54 E-value: 3.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 208 LLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARrEVDAALQASPNNLQARYIQALIDFREKKTERAR 287
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|....
gi 1308963986 288 DRLAAVLKSAPNYL 301
Cdd:COG3063 80 AYLERALELDPSAL 93
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
235-533 |
4.26e-04 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 43.36 E-value: 4.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 235 ARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAP-NYLPALLLGGSIEYA 313
Cdd:COG3071 18 AALLEGLLALAEGRYARAEKLLSKAAEHSEAPLLAYLLAARAAQALGDYERRDEYLAQALELAPeAELAVLLTRAELLLD 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 314 LGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPdDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFE 393
Cdd:COG3071 98 QGQAEQALATLEALRAGAPRHPQVLRLLLQAYRQLGDW-EELLELLPALRKHKALSAEEAQALERRAYLGLLRQAARDAE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 394 QAAQHspDNAAIRTELGISRLAQGDSRAMADLQTAADME-----GSSSRADTFII--LNQLRQQQFDAALASIAALEKKQ 466
Cdd:COG3071 177 ALKAL--WKALPRAERRDPELAAAYARALIALGDHDEAErllreALKRQWDPRLVrlYGRLQGGDPAKQLKRAEKWLKKH 254
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1308963986 467 GADPLIWNYRGAAYLGKKDVVRARDSFSQALKLDPAFFpAAANLAQLDLKDKQPAAARQRFEAILKA 533
Cdd:COG3071 255 PNDPDLLLALGRLCLRNQLWGKAREYLEAALALRPSAE-AYAELARLLEQLGDPEEAAEHYRKALAL 320
|
|
| YfgM |
COG2976 |
Putative negative regulator of RcsB-dependent stress response, UPF0070 family [Signal ... |
35-166 |
4.34e-04 |
|
Putative negative regulator of RcsB-dependent stress response, UPF0070 family [Signal transduction mechanisms];
Pssm-ID: 442215 [Multi-domain] Cd Length: 207 Bit Score: 42.53 E-value: 4.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 35 EAQALAAAGDYKAAIIQLKNAVAEDDKNP---EARYELGKLYLEQSDLASAEKEFRRAREAGYEEN---AVNPMIARALL 108
Cdd:COG2976 59 QLLEALAAGDAAAAAAAAEKLIDDYGGTAyaaLAALLLAKAAVDAGDLDKAAAQLQWVLDNAKDPAlkaLARLRLARVLL 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 109 GQRDFERVLDELpAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAE 166
Cdd:COG2976 139 AQKKYDEALATL-DAVKPEAFAALYAELRGDILLAQGDKAEARAAYQKALAALPEDAP 195
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
26-106 |
5.27e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 40.76 E-value: 5.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 26 GQDSTTLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRARE---AGYEENAVNPM 102
Cdd:COG4235 48 PDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLAllpADAPARLLEAS 127
|
....
gi 1308963986 103 IARA 106
Cdd:COG4235 128 IAEA 131
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
36-138 |
5.86e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 40.76 E-value: 5.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 36 AQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAGYEENAVNPMIARALLGQRDFER 115
Cdd:COG4235 24 GRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQGDYAE 103
|
90 100
....*....|....*....|...
gi 1308963986 116 VLDELPAPVASDPATATLQALRA 138
Cdd:COG4235 104 AIAAWQKLLALLPADAPARLLEA 126
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
474-696 |
6.30e-04 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 43.43 E-value: 6.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 474 NYRGAAYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQRFEAILKANPKHLNAMLALADLALRDKD 553
Cdd:TIGR00990 335 NLRGTFKCLKGKHLEALADLSKSIELDPRVTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHFIKGE 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 554 ETAYVSWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLV 633
Cdd:TIGR00990 415 FAQAGKDYQKSIDLDPDFIFSHIQLGVTQYKEGSIASSMATFRRCKKNFPEAPDVYNYYGELLLDQNKFDEAIEKFDTAI 494
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 634 ERQPG------QAAPLVKLASAQVAAK-DLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKL 696
Cdd:TIGR00990 495 ELEKEtkpmymNVLPLINKALALFQWKqDFIEAENLCEKALIIDPECDIAVATMAQLLLQQGDVDEALKL 564
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
184-395 |
6.56e-04 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 42.21 E-value: 6.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 184 AMQTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNAR-----LALAGIALAD-DKLADARREVD 257
Cdd:COG4785 18 AASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPdlaqlYYERGVAYDSlGDYDLAIADFD 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 258 AALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYA 337
Cdd:COG4785 98 QALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPER 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 338 LRLLAATQLRLGRPDDAANTIAPAVRAatgdpgvllvageiALAQKNFAQASAYFEQA 395
Cdd:COG4785 178 ALWLYLAERKLDPEKALALLLEDWATA--------------YLLQGDTEEARELFKLA 221
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
714-877 |
6.56e-04 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 42.21 E-value: 6.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 714 EGDTALARKDYPAALAAFERAHALEPAGMLLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAA 793
Cdd:COG4785 12 LALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 794 ATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKA 872
Cdd:COG4785 92 AIADFDQALELDPDLAEAYNNRGLAYLLLGDyDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELD 171
|
....*
gi 1308963986 873 PDNAE 877
Cdd:COG4785 172 PNDPE 176
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
202-397 |
6.92e-04 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 42.21 E-value: 6.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 202 LLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQAsPNNLQARYIQALIDFREK 281
Cdd:COG4785 9 LLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALAL-PDLAQLYYERGVAYDSLG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 282 KTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPA 361
Cdd:COG4785 88 DYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKA 167
|
170 180 190
....*....|....*....|....*....|....*.
gi 1308963986 362 VRAATGDPGVLLVAGeiaLAQKNFAQASAYFEQAAQ 397
Cdd:COG4785 168 LELDPNDPERALWLY---LAERKLDPEKALALLLED 200
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
564-705 |
7.13e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 41.10 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 564 AAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPL 643
Cdd:COG5010 12 LYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELY 91
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1308963986 644 VKLASAQVAAKDLPGARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQP 705
Cdd:COG5010 92 YNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| HemYx |
COG3898 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to HemY-type ... |
361-601 |
8.85e-04 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to HemY-type protoporphyrinogen oxidase) [Function unknown];
Pssm-ID: 443105 [Multi-domain] Cd Length: 468 Bit Score: 42.96 E-value: 8.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 361 AVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQAAQHSPDNAAIRTELGISRLAQGDSRAMADL-QTAADMEGSSSRAD 439
Cdd:COG3898 110 AERLLDRPPLTLLLEAQAAQLAGDREAARRAFEAMLEDPETRFLGLRGLMVEALRRGDTEAALALaEEALALAPKLPWAQ 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 440 TFIILNQLRQQQFDAALASIAALEKKQGADPLIWNYRGAAYL-------GKKDVVRARDSFSQALKLDPAFFPAAANLAQ 512
Cdd:COG3898 190 DALLELQAAAGDWDGALATLDAALKAGLLDKDVARRRRAVLLtararelEEGDPDEARELAIEALKLAPDLVPAAVLAAR 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 513 LDLKDKQPAAARQRFEAILKANPkHLNAMLALADLAlrdKDETAY--VSWQEKAAAAHPEALQPRVALARYQLAKGDknk 590
Cdd:COG3898 270 LLIAQGKLRKAAKVLEKAWRAQP-HPDLAAAYAELR---PGDSALdrLKRAETLAALNPDHPESRLALAEAALAAGD--- 342
|
250
....*....|.
gi 1308963986 591 aLATAREAANA 601
Cdd:COG3898 343 -FGEARRALGP 352
|
|
| PRK11788 |
PRK11788 |
tetratricopeptide repeat protein; Provisional |
684-837 |
9.70e-04 |
|
tetratricopeptide repeat protein; Provisional
Pssm-ID: 236983 [Multi-domain] Cd Length: 389 Bit Score: 42.49 E-value: 9.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 684 EIQGGRYDEAQKLAKQVQQQQPGKAAGFILEGDTALARKDYPAALAAFERAHALEPAGMLLV--RQLQIFNATQRTEEGE 761
Cdd:PRK11788 190 ALARGDLDAARALLKKALAADPQCVRASILLGDLALAQGDYAAAIEALERVEEQDPEYLSEVlpKLMECYQALGDEAEGL 269
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 762 KRLAAWLVDHPqdaGTRAL--LAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGDKRAVSFAEQALKL 837
Cdd:PRK11788 270 EFLRRALEEYP---GADLLlaLAQLLEEQEGPEAAQALLREQLRRHPSLRGFHRLLDYHLAEAEEGRAKESLLLLRDL 344
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
36-76 |
1.37e-03 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 37.07 E-value: 1.37e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1308963986 36 AQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQ 76
Cdd:pfam13414 1 GDAYYEQGKYEEAIEAYKKALKLDPDNPEAYYNLGLAYYKL 41
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
242-335 |
1.61e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 38.61 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 242 IALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARdRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAE 321
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|....
gi 1308963986 322 AHLNKVAKATPNNL 335
Cdd:COG3063 80 AYLERALELDPSAL 93
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
562-798 |
1.76e-03 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 41.43 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 562 EKAAAAHPEA-LQPRVALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQ---P 637
Cdd:COG3071 74 AQALELAPEAeLAVLLTRAELLLDQGQAEQALATLEALRAGAPRHPQVLRLLLQAYRQLGDWEELLELLPALRKHKalsA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 638 GQAAPLVKLASAQV---AAKDLPGAR---KSLQDALRIQPDWLDAQMMLggvEIQGGRYDEAQKLAKQVQQQQPGKAAGF 711
Cdd:COG3071 154 EEAQALERRAYLGLlrqAARDAEALKalwKALPRAERRDPELAAAYARA---LIALGDHDEAERLLREALKRQWDPRLVR 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 712 ILegdTALARKDYPAALAAFERAHALEPAGMLLVRQL-QIFNATQRTEEGEKRLAAwLVDHPQDAGTRALLAESLIRRKQ 790
Cdd:COG3071 231 LY---GRLQGGDPAKQLKRAEKWLKKHPNDPDLLLALgRLCLRNQLWGKAREYLEA-ALALRPSAEAYAELARLLEQLGD 306
|
....*...
gi 1308963986 791 YAAATEHY 798
Cdd:COG3071 307 PEEAAEHY 314
|
|
| TPR_19 |
pfam14559 |
Tetratricopeptide repeat; |
855-922 |
1.79e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 434038 [Multi-domain] Cd Length: 65 Bit Score: 37.56 E-value: 1.79e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1308963986 855 QGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLasgARFQQEPEARALLTQL 922
Cdd:pfam14559 1 EGDYAEALELLEQALAEDPDNAEARLGLAEALLALGRLDEAEALLAALP---AADPDDPRYAALLAKL 65
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
235-428 |
1.95e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 40.67 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 235 ARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALIDFREKKTERARDRLAAVLKSAPNYLPALLLGGSIEYAL 314
Cdd:COG4785 7 ALLLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 315 GNLQTAEAHLNKVAKATPNNLYALRLLAATQLRLGRPDDAANTIAPAVRAATGDPGVLLVAGEIALAQKNFAQASAYFEQ 394
Cdd:COG4785 87 GDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEK 166
|
170 180 190
....*....|....*....|....*....|....
gi 1308963986 395 AAQHSPDNAAIRTELGISRLAQGDSRAMADLQTA 428
Cdd:COG4785 167 ALELDPNDPERALWLYLAERKLDPEKALALLLED 200
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
726-873 |
2.24e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.56 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 726 AALAAFERAHALEPAGMLLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGTRALLAESLIRRKQYAAATEHYLVLNKRK 805
Cdd:COG5010 5 EGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLD 84
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1308963986 806 PDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDTYGWILAQQGQASKGLPHLQKALSKAP 873
Cdd:COG5010 85 PNNPELYYNLALLYSRSGDkDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
519-671 |
2.28e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.56 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 519 QPAAARQRFEAILKANPKHLNAMLALADLALRDKDETAYVSWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREA 598
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1308963986 599 ANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQPGQAAPLVKLASAQVAAKDLPGARKSLQDALRIQP 671
Cdd:COG5010 81 LQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| PRK09782 |
PRK09782 |
bacteriophage N4 receptor, outer membrane subunit; Provisional |
247-903 |
2.49e-03 |
|
bacteriophage N4 receptor, outer membrane subunit; Provisional
Pssm-ID: 236624 [Multi-domain] Cd Length: 987 Bit Score: 41.82 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 247 DKLADARREVDAALQASPNNLQAR--YIQALIDFRekKTERARDRLAAVLKSAPNYLPALLLGGSIEYALGNLQTAEAHL 324
Cdd:PRK09782 58 NDEATAIREFEYIHQQVPDNIPLTlyLAEAYRHFG--HDDRARLLLEDQLKRHPGDARLERSLAAIPVEVKSVTTVEELL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 325 nkvakATPNNLYALRLLAA------TQLRLGRPDDAANTIAPAVRAATGDPGVLLVA-GEIALAQKNFAQASAYFEQAAQ 397
Cdd:PRK09782 136 -----AQQKACDAVPTLRCrsevgqNALRLAQLPVARAQLNDATFAASPEGKTLRTDlLQRAIYLKQWSQADTLYNEARQ 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 398 HSPDNAAIRTELGISRLAQGDSRAMADLQT---AADMEGSSSRADTFIILNQLRQQQfdAALASIAAlEKKQGADPLIWN 474
Cdd:PRK09782 211 QNTLSAAERRQWFDVLLAGQLDDRLLALQSqgiFTDPQSRITYATALAYRGEKARLQ--HYLIENKP-LFTTDAQEKSWL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 475 YRGAAYLGKKDVVRAR--DSFSQALKldpafFPAAANLAQLDLKDkqPAAARQRFEAILKANPkhLNAMLALADLALRDK 552
Cdd:PRK09782 288 YLLSKYSANPVQALANytVQFADNRQ-----YVVGATLPVLLKEG--QYDAAQKLLATLPANE--MLEERYAVSVATRNK 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 553 DETAYVSWQEKAAAahPEALQpRVALARYQLAKGDKNKALATAREAAnanpdnpaaLDLLGSTQLalgdTTNALGSYRKL 632
Cdd:PRK09782 359 AEALRLARLLYQQE--PANLT-RLDQLTWQLMQNGQSREAADLLLQR---------YPFQGDARL----SQTLMARLASL 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 633 VERQPGQAAPL-VKLASAQVAAKdlpgARKSLQDALRIQPDWLDAQMMLGGVEIQGGRYDEAQKLAKQVQQQQPGKAAGF 711
Cdd:PRK09782 423 LESHPYLATPAkVAILSKPLPLA----EQRQWQSQLPGIADNCPAIVRLLGDMSPSYDAAAWNRLAKCYRDTLPGVALYA 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 712 ILEGDTAL--------------ARKDYPAALAAFERahaLEPAGMLLVRQLQIFNATQRTEEGEKRLAAWLVDHPQDAGT 777
Cdd:PRK09782 499 WLQAEQRQpdawqhravayqayQVEDYATALAAWQK---ISLHDMSNEDLLAAANTAQAAGNGAARDRWLQQAEQRGLGD 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 778 RALLAesLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGDKR-----AVSFAEQALKLQPENPVVMDTYGWIL 852
Cdd:PRK09782 576 NALYW--WLHAQRYIPGQPELALNDLTRSLNIAPSANAYVARATIYRQRhnvpaAVSDLRAALELEPNNSNYQAALGYAL 653
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 1308963986 853 AQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLL 903
Cdd:PRK09782 654 WDSGDIAQSREMLERAHKGLPDDPALIRQLAYVNQRLDDMAATQHYARLVI 704
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
576-637 |
2.99e-03 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 40.69 E-value: 2.99e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1308963986 576 VALARYQLAKGDKNKALATAREAANANPDNPAALDLLGSTQLALGDTTNALGSYRKLVERQP 637
Cdd:cd24142 4 LEKAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIELDP 65
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
31-191 |
3.55e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 39.90 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 31 TLVGEAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRA--REAGYEENAVNpmIARALL 108
Cdd:COG4785 41 LADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQAleLDPDLAEAYNN--RGLAYL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 109 GQRDFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHlALAQLALADGDADKAMQTL 188
Cdd:COG4785 119 LLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERA-LWLYLAERKLDPEKALALL 197
|
...
gi 1308963986 189 DQA 191
Cdd:COG4785 198 LED 200
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
37-167 |
3.73e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 38.05 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 37 QALAAAGDYKAAIIQLKNAVA---EDDKNPEARYELGKLYLEQSDLASAEKEFRRAreagYEENAVNPMIARALLGQrdf 113
Cdd:COG1729 1 KALLKAGDYDEAIAAFKAFLKrypNSPLAPDALYWLGEAYYALGDYDEAAEAFEKL----LKRYPDSPKAPDALLKL--- 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1308963986 114 ervldelpapvasdpatatlqalrATAQLGLGRKEDARKTLQQAQQVAPGNAEV 167
Cdd:COG1729 74 ------------------------GLSYLELGDYDKARATLEELIKKYPDSEAA 103
|
|
| PRK09782 |
PRK09782 |
bacteriophage N4 receptor, outer membrane subunit; Provisional |
5-228 |
3.87e-03 |
|
bacteriophage N4 receptor, outer membrane subunit; Provisional
Pssm-ID: 236624 [Multi-domain] Cd Length: 987 Bit Score: 41.05 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 5 RPARRLLPVLMLGASLLTACGGQDSTTLVGEAQALAAAGDYKAAIiQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEK 84
Cdd:PRK09782 485 KCYRDTLPGVALYAWLQAEQRQPDAWQHRAVAYQAYQVEDYATAL-AAWQKISLHDMSNEDLLAAANTAQAAGNGAARDR 563
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 85 EFRRAREAGYEENAVNPMIARALLGQRDFERVLDELPAPVASDPATATLQALRATAQLGlGRKEDARKTLQQAQQVAPGN 164
Cdd:PRK09782 564 WLQQAEQRGLGDNALYWWLHAQRYIPGQPELALNDLTRSLNIAPSANAYVARATIYRQR-HNVPAAVSDLRAALELEPNN 642
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1308963986 165 AEVHLALAQLALADGDADKAMQTLDQALRI---DPGHRDSLLLKADLLRatgkpvDAAAAYHDVLKV 228
Cdd:PRK09782 643 SNYQAALGYALWDSGDIAQSREMLERAHKGlpdDPALIRQLAYVNQRLD------DMAATQHYARLV 703
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
479-573 |
3.94e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 37.46 E-value: 3.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 479 AYLGKKDVVRARDSFSQALKLDPAFFPAAANLAQLDLKDKQPAAARQrFEAILKANPKHLNAMLALADLALRDKDETAYV 558
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|....*
gi 1308963986 559 SWQEKAAAAHPEALQ 573
Cdd:COG3063 80 AYLERALELDPSALR 94
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
312-406 |
3.99e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 38.05 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 312 YALGNLQTAEAHLNKVAKATPNNLY---ALRLLAATQLRLGRPDDAANTIAPAVRAATGD---PGVLLVAGEIALAQKNF 385
Cdd:COG1729 4 LKAGDYDEAIAAFKAFLKRYPNSPLapdALYWLGEAYYALGDYDEAAEAFEKLLKRYPDSpkaPDALLKLGLSYLELGDY 83
|
90 100
....*....|....*....|.
gi 1308963986 386 AQASAYFEQAAQHSPDNAAIR 406
Cdd:COG1729 84 DKARATLEELIKKYPDSEAAK 104
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
35-265 |
4.20e-03 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 40.28 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 35 EAQALAAAGDYKAAIIQLKNAVAEDDKNPEARYELGKLYLEQSDLASAEKEFRRAREAG---------YEENAVNPMIAR 105
Cdd:COG3071 91 RAELLLDQGQAEQALATLEALRAGAPRHPQVLRLLLQAYRQLGDWEELLELLPALRKHKalsaeeaqaLERRAYLGLLRQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 106 ALLGQRDFERVLDELPAPVASDPAtatLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVhlaLAQLALADGDADKAM 185
Cdd:COG3071 171 AARDAEALKALWKALPRAERRDPE---LAAAYARALIALGDHDEAERLLREALKRQWDPRLV---RLYGRLQGGDPAKQL 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 186 QTLDQALRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRhTNARLALAGIALADDKLADARREVDAALQASPN 265
Cdd:COG3071 245 KRAEKWLKKHPNDPDLLLALGRLCLRNQLWGKAREYLEAALALRPS-AEAYAELARLLEQLGDPEEAAEHYRKALALALG 323
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
112-264 |
4.46e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 38.79 E-value: 4.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 112 DFERVLDELPAPVASDPATATLQALRATAQLGLGRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQA 191
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1308963986 192 LRIDPGHRDSLLLKADLLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASP 264
Cdd:COG5010 81 LQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
583-672 |
5.49e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 37.66 E-value: 5.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 583 LAKGDKNKALATAREAANANPDNPAALD---LLGSTQLALGDTTNALGSYRKLVERQPG---QAAPLVKLASAQVAAKDL 656
Cdd:COG1729 4 LKAGDYDEAIAAFKAFLKRYPNSPLAPDalyWLGEAYYALGDYDEAAEAFEKLLKRYPDspkAPDALLKLGLSYLELGDY 83
|
90
....*....|....*.
gi 1308963986 657 PGARKSLQDALRIQPD 672
Cdd:COG1729 84 DKARATLEELIKKYPD 99
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
278-357 |
6.17e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 37.28 E-value: 6.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 278 FREKKTERARDRLAAVLKSAPN--YLP-ALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLY---ALRLLAATQLRLGRP 351
Cdd:COG1729 4 LKAGDYDEAIAAFKAFLKRYPNspLAPdALYWLGEAYYALGDYDEAAEAFEKLLKRYPDSPKapdALLKLGLSYLELGDY 83
|
....*.
gi 1308963986 352 DDAANT 357
Cdd:COG1729 84 DKARAT 89
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
772-904 |
6.29e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 39.13 E-value: 6.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 772 PQDAGTRALLAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVVMDTYGW 850
Cdd:COG4785 36 ALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDyDLAIADFDQALELDPDLAEAYNNRGL 115
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1308963986 851 ILAQQGQASKGLPHLQKALSKAPDNAEIQYHLAVVLAKTGDHTRARGELERLLA 904
Cdd:COG4785 116 AYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALE 169
|
|
| PRK11788 |
PRK11788 |
tetratricopeptide repeat protein; Provisional |
550-705 |
7.24e-03 |
|
tetratricopeptide repeat protein; Provisional
Pssm-ID: 236983 [Multi-domain] Cd Length: 389 Bit Score: 39.79 E-value: 7.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 550 RDKDETAYVSWQEKAAAAHPEALQPRVALARYQLAKGDKNKALATAREAANANPDN-PAALDLLGSTQLALGDTTNALGS 628
Cdd:PRK11788 192 ARGDLDAARALLKKALAADPQCVRASILLGDLALAQGDYAAAIEALERVEEQDPEYlSEVLPKLMECYQALGDEAEGLEF 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 629 YRKLVERQPGqAAPLVKLASAQVAAKDLPGARKSLQDALRIQPD------WLDAQMMLGGVEIQGGRYDEAQKLAKQVQQ 702
Cdd:PRK11788 272 LRRALEEYPG-ADLLLALAQLLEEQEGPEAAQALLREQLRRHPSlrgfhrLLDYHLAEAEEGRAKESLLLLRDLVGEQLK 350
|
...
gi 1308963986 703 QQP 705
Cdd:PRK11788 351 RKP 353
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
243-337 |
7.63e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 37.28 E-value: 7.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 243 ALADDKLADARREVDAALQASPNNL---QARYIQALIDFREKKTERARDRLAAVLKSAPN---YLPALLLGGSIEYALGN 316
Cdd:COG1729 3 LLKAGDYDEAIAAFKAFLKRYPNSPlapDALYWLGEAYYALGDYDEAAEAFEKLLKRYPDspkAPDALLKLGLSYLELGD 82
|
90 100
....*....|....*....|.
gi 1308963986 317 LQTAEAHLNKVAKATPNNLYA 337
Cdd:COG1729 83 YDKARATLEELIKKYPDSEAA 103
|
|
| HemYx |
COG3898 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to HemY-type ... |
64-343 |
7.94e-03 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to HemY-type protoporphyrinogen oxidase) [Function unknown];
Pssm-ID: 443105 [Multi-domain] Cd Length: 468 Bit Score: 39.87 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 64 EARYELGKLYLEQSDLASAEKEFRRAREAGYEenavnpmiARALLGQRDFERVLDELPAPVASD--PATATLQALRA--- 138
Cdd:COG3898 78 RRRRRKGYQALSRGLIAVAAGDGRLARRKAAK--------AERLLDRPPLTLLLEAQAAQLAGDreAARRAFEAMLEdpe 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 139 TAQLGL----------GRKEDARKTLQQAQQVAPGNAEVHLALAQLALADGDADKAMQTLDQALR---IDP---GHRDSL 202
Cdd:COG3898 150 TRFLGLrglmvealrrGDTEAALALAEEALALAPKLPWAQDALLELQAAAGDWDGALATLDAALKaglLDKdvaRRRRAV 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 203 LLKAD-LLRATGKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPN-NLQARYIQALIDfre 280
Cdd:COG3898 230 LLTARaRELEEGDPDEARELAIEALKLAPDLVPAAVLAARLLIAQGKLRKAAKVLEKAWRAQPHpDLAAAYAELRPG--- 306
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1308963986 281 kktERARDRLAAV---LKSAPNYLPALLLGGSIEYALGNLQTAEAHLNKVAKATPNNLyALRLLAA 343
Cdd:COG3898 307 ---DSALDRLKRAetlAALNPDHPESRLALAEAALAAGDFGEARRALGPLLEERPTAR-VCLLMAE 368
|
|
| TPR_19 |
pfam14559 |
Tetratricopeptide repeat; |
213-276 |
8.15e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 434038 [Multi-domain] Cd Length: 65 Bit Score: 35.64 E-value: 8.15e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1308963986 213 GKPVDAAAAYHDVLKVDPRHTNARLALAGIALADDKLADARREVDAALQASPNNLQARYIQALI 276
Cdd:pfam14559 2 GDYAEALELLEQALAEDPDNAEARLGLAEALLALGRLDEAEALLAALPAADPDDPRYAALLAKL 65
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
781-906 |
9.87e-03 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 39.15 E-value: 9.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308963986 781 LAESLIRRKQYAAATEHYLVLNKRKPDNLVVLNNLAWALNETGD-KRAVSFAEQALKLQPENPVvmDTYGWiLAQQGQAS 859
Cdd:cd24142 6 KAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDvEEAREVLLRAIELDPDGGY--EKYLY-LGQLSGGE 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1308963986 860 KGLPHLQKALskapdnAEIQYHLAVVLAKTGDHTRARGELERLLASG 906
Cdd:cd24142 83 EALQYYEKGI------EILEEELQALQAASAEAEEEAEELKRKLSSA 123
|
|
| |
