bifunctional hexulose-6-phosphate synthase/ribonuclease regulator [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15]
List of domain hits
Name | Accession | Description | Interval | E-value | |||||||
PRK07028 super family | cl35534 | bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated |
4-445 | 0e+00 | |||||||
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated The actual alignment was detected with superfamily member PRK07028: Pssm-ID: 235912 [Multi-domain] Cd Length: 430 Bit Score: 635.91 E-value: 0e+00
|
|||||||||||
Name | Accession | Description | Interval | E-value | |||||||
PRK07028 | PRK07028 | bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated |
4-445 | 0e+00 | |||||||
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Pssm-ID: 235912 [Multi-domain] Cd Length: 430 Bit Score: 635.91 E-value: 0e+00
|
|||||||||||
UlaD | COG0269 | 3-keto-L-gulonate-6-phosphate decarboxylase [Carbohydrate transport and metabolism]; |
5-223 | 1.09e-82 | |||||||
3-keto-L-gulonate-6-phosphate decarboxylase [Carbohydrate transport and metabolism]; Pssm-ID: 440039 Cd Length: 212 Bit Score: 253.16 E-value: 1.09e-82
|
|||||||||||
KGPDC_HPS | cd04726 | 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate ... |
5-217 | 2.47e-73 | |||||||
3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates. Pssm-ID: 240077 [Multi-domain] Cd Length: 202 Bit Score: 229.00 E-value: 2.47e-73
|
|||||||||||
RuMP_HxlA | TIGR03128 | 3-hexulose-6-phosphate synthase; Members of this protein family are 3-hexulose-6-phosphate ... |
7-221 | 2.95e-69 | |||||||
3-hexulose-6-phosphate synthase; Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase. Pssm-ID: 132172 [Multi-domain] Cd Length: 206 Bit Score: 218.78 E-value: 2.95e-69
|
|||||||||||
RraA-like | pfam03737 | Aldolase/RraA; Members of this family include regulator of ribonuclease E activity A (RraA) ... |
250-398 | 3.27e-58 | |||||||
Aldolase/RraA; Members of this family include regulator of ribonuclease E activity A (RraA) and 4-hydroxy-4-methyl-2-oxoglutarate (HMG)/4-carboxy- 4-hydroxy-2-oxoadipate (CHA) aldolase, also known as RraA-like protein. RraA acts as a trans-acting modulator of RNA turnover, binding essential endonuclease RNase E and inhibiting RNA processing. RraA-like proteins seem to contain aldolase and/or decarboxylase activity either in place of or in addition to the RNase E inhibitor functions. Pssm-ID: 427475 [Multi-domain] Cd Length: 148 Bit Score: 188.10 E-value: 3.27e-58
|
|||||||||||
OMPdecase | smart00934 | Orotidine 5'-phosphate decarboxylase / HUMPS family; Orotidine 5'-phosphate decarboxylase ... |
6-217 | 6.00e-34 | |||||||
Orotidine 5'-phosphate decarboxylase / HUMPS family; Orotidine 5'-phosphate decarboxylase (OMPdecase) catalyzes the last step in the de novo biosynthesis of pyrimidines, the decarboxylation of OMP into UMP. In higher eukaryotes OMPdecase is part, with orotate phosphoribosyltransferase, of a bifunctional enzyme, while the prokaryotic and fungal OMPdecases are monofunctional protein. Pssm-ID: 214921 Cd Length: 212 Bit Score: 126.51 E-value: 6.00e-34
|
|||||||||||
Name | Accession | Description | Interval | E-value | |||||||
PRK07028 | PRK07028 | bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated |
4-445 | 0e+00 | |||||||
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Pssm-ID: 235912 [Multi-domain] Cd Length: 430 Bit Score: 635.91 E-value: 0e+00
|
|||||||||||
UlaD | COG0269 | 3-keto-L-gulonate-6-phosphate decarboxylase [Carbohydrate transport and metabolism]; |
5-223 | 1.09e-82 | |||||||
3-keto-L-gulonate-6-phosphate decarboxylase [Carbohydrate transport and metabolism]; Pssm-ID: 440039 Cd Length: 212 Bit Score: 253.16 E-value: 1.09e-82
|
|||||||||||
KGPDC_HPS | cd04726 | 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate ... |
5-217 | 2.47e-73 | |||||||
3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates. Pssm-ID: 240077 [Multi-domain] Cd Length: 202 Bit Score: 229.00 E-value: 2.47e-73
|
|||||||||||
RuMP_HxlA | TIGR03128 | 3-hexulose-6-phosphate synthase; Members of this protein family are 3-hexulose-6-phosphate ... |
7-221 | 2.95e-69 | |||||||
3-hexulose-6-phosphate synthase; Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase. Pssm-ID: 132172 [Multi-domain] Cd Length: 206 Bit Score: 218.78 E-value: 2.95e-69
|
|||||||||||
RraA | COG0684 | RNA degradosome component RraA (regulator of RNase E activity) [Translation, ribosomal ... |
237-432 | 4.34e-69 | |||||||
RNA degradosome component RraA (regulator of RNase E activity) [Translation, ribosomal structure and biogenesis]; Pssm-ID: 440448 [Multi-domain] Cd Length: 204 Bit Score: 218.12 E-value: 4.34e-69
|
|||||||||||
RraA-like | pfam03737 | Aldolase/RraA; Members of this family include regulator of ribonuclease E activity A (RraA) ... |
250-398 | 3.27e-58 | |||||||
Aldolase/RraA; Members of this family include regulator of ribonuclease E activity A (RraA) and 4-hydroxy-4-methyl-2-oxoglutarate (HMG)/4-carboxy- 4-hydroxy-2-oxoadipate (CHA) aldolase, also known as RraA-like protein. RraA acts as a trans-acting modulator of RNA turnover, binding essential endonuclease RNase E and inhibiting RNA processing. RraA-like proteins seem to contain aldolase and/or decarboxylase activity either in place of or in addition to the RNase E inhibitor functions. Pssm-ID: 427475 [Multi-domain] Cd Length: 148 Bit Score: 188.10 E-value: 3.27e-58
|
|||||||||||
RraA_family | cd16841 | ribonuclease activity regulator RraA family; RraA protein family is named after the regulator ... |
250-400 | 3.37e-55 | |||||||
ribonuclease activity regulator RraA family; RraA protein family is named after the regulator of ribonuclease activity A (RraA), a protein that binds to RNase E and inhibits RNase E endonucleolytic cleavages. Members also include proteins with other functions, like a 4-hydroxy-4-methyl-2-oxoglutarate/4-carboxy-4-hydroxy-2-oxoadipate (HMG/CHA) aldolase from Pseudomonas putida, which catalyzes the last step of the bacterial protocatechuate 4,5-cleavage pathway and the uncharacterized YER010Cp protein from yeast, an organism lacking RNAse E. Pssm-ID: 319245 [Multi-domain] Cd Length: 150 Bit Score: 180.35 E-value: 3.37e-55
|
|||||||||||
PRK06201 | PRK06201 | hypothetical protein; Validated |
240-429 | 4.03e-46 | |||||||
hypothetical protein; Validated Pssm-ID: 180465 [Multi-domain] Cd Length: 221 Bit Score: 158.96 E-value: 4.03e-46
|
|||||||||||
PRK13307 | PRK13307 | bifunctional 5,6,7,8-tetrahydromethanopterin hydro-lyase/3-hexulose-6-phosphate synthase; |
5-222 | 5.09e-35 | |||||||
bifunctional 5,6,7,8-tetrahydromethanopterin hydro-lyase/3-hexulose-6-phosphate synthase; Pssm-ID: 183964 [Multi-domain] Cd Length: 391 Bit Score: 133.98 E-value: 5.09e-35
|
|||||||||||
OMPdecase | smart00934 | Orotidine 5'-phosphate decarboxylase / HUMPS family; Orotidine 5'-phosphate decarboxylase ... |
6-217 | 6.00e-34 | |||||||
Orotidine 5'-phosphate decarboxylase / HUMPS family; Orotidine 5'-phosphate decarboxylase (OMPdecase) catalyzes the last step in the de novo biosynthesis of pyrimidines, the decarboxylation of OMP into UMP. In higher eukaryotes OMPdecase is part, with orotate phosphoribosyltransferase, of a bifunctional enzyme, while the prokaryotic and fungal OMPdecases are monofunctional protein. Pssm-ID: 214921 Cd Length: 212 Bit Score: 126.51 E-value: 6.00e-34
|
|||||||||||
OMPdecase | pfam00215 | Orotidine 5'-phosphate decarboxylase / HUMPS family; This family includes Orotidine 5 ... |
5-217 | 8.30e-31 | |||||||
Orotidine 5'-phosphate decarboxylase / HUMPS family; This family includes Orotidine 5'-phosphate decarboxylase enzymes EC:4.1.1.23 that are involved in the final step of pyrimidine biosynthesis. The family also includes enzymes such as hexulose-6-phosphate synthase. This family appears to be distantly related to pfam00834. Pssm-ID: 395160 Cd Length: 215 Bit Score: 118.14 E-value: 8.30e-31
|
|||||||||||
PRK08245 | PRK08245 | hypothetical protein; Validated |
237-432 | 4.03e-30 | |||||||
hypothetical protein; Validated Pssm-ID: 236200 Cd Length: 240 Bit Score: 116.92 E-value: 4.03e-30
|
|||||||||||
PRK09262 | PRK09262 | hypothetical protein; Provisional |
238-429 | 1.19e-29 | |||||||
hypothetical protein; Provisional Pssm-ID: 181735 Cd Length: 225 Bit Score: 115.03 E-value: 1.19e-29
|
|||||||||||
ligK_PcmE | TIGR02798 | 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; Members of this protein ... |
241-412 | 1.37e-24 | |||||||
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; Members of this protein family 4-carboxy-4-hydroxy-2-oxoadipate aldolase, also called 4-oxalocitramalate aldolase. This enzyme of the protocatechuate 4,5-cleavage pathway converts its substrate to pyruvate plus oxaloacetate. Protocatechuate is an intermediate in many pathways for degrading aromatic compounds, including lignin, fluorene, etc. Hara, et al. showed the LigK gene was not only a 4-carboxy-4-hydroxy-2-oxoadipate aldolase but also the enzyme of the following step, oxaloacetate decarboxylase. Pssm-ID: 131845 Cd Length: 222 Bit Score: 101.07 E-value: 1.37e-24
|
|||||||||||
ulaD | PRK13306 | 3-dehydro-L-gulonate-6-phosphate decarboxylase; |
4-217 | 2.85e-20 | |||||||
3-dehydro-L-gulonate-6-phosphate decarboxylase; Pssm-ID: 237344 Cd Length: 216 Bit Score: 88.83 E-value: 2.85e-20
|
|||||||||||
PRK12764 | PRK12764 | fumarylacetoacetate hydrolase family protein; |
237-432 | 2.76e-18 | |||||||
fumarylacetoacetate hydrolase family protein; Pssm-ID: 237193 [Multi-domain] Cd Length: 500 Bit Score: 87.12 E-value: 2.76e-18
|
|||||||||||
NOT-MenG | TIGR01935 | RraA famliy; The E. coli member of this family has been characterized as a regulator of RNase ... |
249-400 | 9.55e-18 | |||||||
RraA famliy; The E. coli member of this family has been characterized as a regulator of RNase E and its crystal structure has been analyzed. This model was initially classified as a "hypothetical equivalog" expressing the tentative hypothesis that all members might have the same function as the E. coli enzyme. Considering the second clade of enterobacterial sequences within this family, that appears to be less tenable. The function of these sequences outside of the narrow RraA equivalog model (TIGR02998) remains obscure. All of these were initially annotated as MenG, AKA S-adenosylmethionine: 2-demethylmenaquinone methyltransferase (EC 2.1.-.-). See the references characterizing this as a case of transitive annotation error in the case of the E. coli protein. [Unknown function, General] Pssm-ID: 130990 Cd Length: 150 Bit Score: 79.68 E-value: 9.55e-18
|
|||||||||||
PRK12487 | PRK12487 | putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase; |
278-399 | 3.53e-17 | |||||||
putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Pssm-ID: 183553 Cd Length: 163 Bit Score: 78.46 E-value: 3.53e-17
|
|||||||||||
PRK09372 | PRK09372 | ribonuclease E inhibitor RraA; |
245-401 | 3.05e-14 | |||||||
ribonuclease E inhibitor RraA; Pssm-ID: 236487 Cd Length: 159 Bit Score: 70.17 E-value: 3.05e-14
|
|||||||||||
sgbH | PRK13305 | 3-keto-L-gulonate-6-phosphate decarboxylase UlaD; |
4-223 | 2.15e-12 | |||||||
3-keto-L-gulonate-6-phosphate decarboxylase UlaD; Pssm-ID: 183962 Cd Length: 218 Bit Score: 66.38 E-value: 2.15e-12
|
|||||||||||
PRK13813 | PRK13813 | orotidine 5'-phosphate decarboxylase; Provisional |
5-222 | 1.61e-10 | |||||||
orotidine 5'-phosphate decarboxylase; Provisional Pssm-ID: 237520 Cd Length: 215 Bit Score: 60.77 E-value: 1.61e-10
|
|||||||||||
pyrF | TIGR01740 | orotidine 5'-phosphate decarboxylase, subfamily 1; This model represents orotidine 5 ... |
9-217 | 3.32e-07 | |||||||
orotidine 5'-phosphate decarboxylase, subfamily 1; This model represents orotidine 5'-monophosphate decarboxylase, the PyrF protein of pyrimidine nucleotide biosynthesis. In many eukaryotes, the region hit by this model is part of a multifunctional protein. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis] Pssm-ID: 273785 Cd Length: 214 Bit Score: 50.82 E-value: 3.32e-07
|
|||||||||||
Rpe | COG0036 | Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; ... |
160-224 | 6.83e-07 | |||||||
Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Pentose-5-phosphate-3-epimerase is part of the Pathway/BioSystem: Pentose phosphate pathway Pssm-ID: 439806 Cd Length: 218 Bit Score: 50.07 E-value: 6.83e-07
|
|||||||||||
OMP_decarboxylase_like | cd04725 | Orotidine 5'-phosphate decarboxylase (ODCase) is a dimeric enzyme that decarboxylates ... |
9-217 | 3.36e-06 | |||||||
Orotidine 5'-phosphate decarboxylase (ODCase) is a dimeric enzyme that decarboxylates orotidine 5'-monophosphate (OMP) to form uridine 5'-phosphate (UMP), an essential step in the pyrimidine biosynthetic pathway. In mammals, UMP synthase contains two domains: the orotate phosphoribosyltransferase (OPRTase) domain that catalyzes the transfer of phosphoribosyl 5'-pyrophosphate (PRPP) to orotate to form OMP, and the orotidine-5'-phosphate decarboxylase (ODCase) domain that decarboxylates OMP to form UMP. Pssm-ID: 240076 Cd Length: 216 Bit Score: 47.94 E-value: 3.36e-06
|
|||||||||||
PyrF | COG0284 | Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism]; Orotidine-5 ... |
5-223 | 6.47e-06 | |||||||
Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism]; Orotidine-5'-phosphate decarboxylase is part of the Pathway/BioSystem: Pyrimidine biosynthesis Pssm-ID: 440053 Cd Length: 228 Bit Score: 47.02 E-value: 6.47e-06
|
|||||||||||
RPE | cd00429 | Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of ... |
160-217 | 9.90e-06 | |||||||
Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis. Pssm-ID: 238244 Cd Length: 211 Bit Score: 46.32 E-value: 9.90e-06
|
|||||||||||
KDPG_aldolase | cd00452 | KDPG and KHG aldolase; KDPG and KHG aldolase. This family belongs to the class I adolases ... |
32-217 | 1.28e-05 | |||||||
KDPG and KHG aldolase; KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources. Pssm-ID: 188632 Cd Length: 190 Bit Score: 45.59 E-value: 1.28e-05
|
|||||||||||
NadC | COG0157 | Nicotinate-nucleotide pyrophosphorylase [Coenzyme transport and metabolism]; ... |
105-210 | 4.23e-05 | |||||||
Nicotinate-nucleotide pyrophosphorylase [Coenzyme transport and metabolism]; Nicotinate-nucleotide pyrophosphorylase is part of the Pathway/BioSystem: NAD biosynthesis Pssm-ID: 439927 [Multi-domain] Cd Length: 272 Bit Score: 45.01 E-value: 4.23e-05
|
|||||||||||
PRK05581 | PRK05581 | ribulose-phosphate 3-epimerase; Validated |
180-223 | 6.24e-05 | |||||||
ribulose-phosphate 3-epimerase; Validated Pssm-ID: 235515 Cd Length: 220 Bit Score: 44.02 E-value: 6.24e-05
|
|||||||||||
PTZ00170 | PTZ00170 | D-ribulose-5-phosphate 3-epimerase; Provisional |
176-220 | 1.38e-04 | |||||||
D-ribulose-5-phosphate 3-epimerase; Provisional Pssm-ID: 240303 Cd Length: 228 Bit Score: 43.05 E-value: 1.38e-04
|
|||||||||||
PRK02227 | PRK02227 | (5-formylfuran-3-yl)methyl phosphate synthase; |
123-214 | 4.83e-04 | |||||||
(5-formylfuran-3-yl)methyl phosphate synthase; Pssm-ID: 235014 Cd Length: 238 Bit Score: 41.44 E-value: 4.83e-04
|
|||||||||||
PLN02334 | PLN02334 | ribulose-phosphate 3-epimerase |
83-225 | 7.67e-04 | |||||||
ribulose-phosphate 3-epimerase Pssm-ID: 215192 Cd Length: 229 Bit Score: 40.76 E-value: 7.67e-04
|
|||||||||||
PRK04169 | PRK04169 | heptaprenylglyceryl phosphate synthase; |
159-222 | 1.67e-03 | |||||||
heptaprenylglyceryl phosphate synthase; Pssm-ID: 235237 Cd Length: 232 Bit Score: 39.79 E-value: 1.67e-03
|
|||||||||||
DRE_TIM_metallolyase | cd03174 | DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes ... |
56-198 | 1.99e-03 | |||||||
DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM". Pssm-ID: 163674 [Multi-domain] Cd Length: 265 Bit Score: 39.75 E-value: 1.99e-03
|
|||||||||||
thiE | PRK00043 | thiamine phosphate synthase; |
160-225 | 3.15e-03 | |||||||
thiamine phosphate synthase; Pssm-ID: 234590 [Multi-domain] Cd Length: 212 Bit Score: 39.01 E-value: 3.15e-03
|
|||||||||||
TIM_phosphate_binding | cd04722 | TIM barrel proteins share a structurally conserved phosphate binding motif and in general ... |
83-228 | 3.67e-03 | |||||||
TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate comes either from the substrate, as in the case of inosine monophosphate dehydrogenase (IMPDH), or from ribulose-5-phosphate 3-epimerase (RPE) or from cofactors, like FMN. Pssm-ID: 240073 [Multi-domain] Cd Length: 200 Bit Score: 38.72 E-value: 3.67e-03
|
|||||||||||
QPRTase_NadC | cd01568 | Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called ... |
105-210 | 3.73e-03 | |||||||
Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other. Pssm-ID: 238802 [Multi-domain] Cd Length: 269 Bit Score: 38.99 E-value: 3.73e-03
|
|||||||||||
PRK12331 | PRK12331 | oxaloacetate decarboxylase subunit alpha; |
108-198 | 4.25e-03 | |||||||
oxaloacetate decarboxylase subunit alpha; Pssm-ID: 183446 [Multi-domain] Cd Length: 448 Bit Score: 39.30 E-value: 4.25e-03
|
|||||||||||
PRK00230 | PRK00230 | orotidine-5'-phosphate decarboxylase; |
186-224 | 5.50e-03 | |||||||
orotidine-5'-phosphate decarboxylase; Pssm-ID: 234695 Cd Length: 230 Bit Score: 38.19 E-value: 5.50e-03
|
|||||||||||
ThiE | COG0352 | Thiamine monophosphate synthase [Coenzyme transport and metabolism]; Thiamine monophosphate ... |
160-224 | 6.03e-03 | |||||||
Thiamine monophosphate synthase [Coenzyme transport and metabolism]; Thiamine monophosphate synthase is part of the Pathway/BioSystem: Thiamine biosynthesis Pssm-ID: 440121 [Multi-domain] Cd Length: 206 Bit Score: 37.86 E-value: 6.03e-03
|
|||||||||||
PcrB_like | cd02812 | PcrB_like proteins. One member of this family, a protein from Archaeoglobus fulgidus, has been ... |
159-207 | 6.18e-03 | |||||||
PcrB_like proteins. One member of this family, a protein from Archaeoglobus fulgidus, has been characterized as a (S)-3-O-geranylgeranylglyceryl phosphate synthase (AfGGGPS). AfGGGPS catalyzes the formation of an ether linkage between sn-glycerol-1-phosphate (G1P) and geranylgeranyl diphosphate (GGPP), the committed step in archaeal lipid biosynthesis. Therefore, it has been proposed that PcrB-like proteins are either prenyltransferases or are involved in lipoteichoic acid biosynthesis although the exact function is still unknown. Pssm-ID: 239206 Cd Length: 219 Bit Score: 37.99 E-value: 6.18e-03
|
|||||||||||
Blast search parameters | ||||
|