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Conserved domains on  [gi|1308675752|gb|PKM47644|]
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flagellar hook-basal body complex protein FliE [Firmicutes bacterium HGW-Firmicutes-8]

Protein Classification

flagellar hook-basal body complex protein FliE( domain architecture ID 10488967)

flagellar hook-basal body complex protein FliE which serves as a structural assembly platform for the rod, and may also serve as a regulator of flagellum-specific secretion

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
17-90 2.79e-30

Flagellar hook-basal body complex protein FliE;


:

Pssm-ID: 460429  Cd Length: 89  Bit Score: 102.26  E-value: 2.79e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1308675752 17 QSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQEIMRMQI 90
Cdd:pfam02049 16 GGGSFASVLKDALDEVNQTQQEAEALAEAFATGEPVDLHDVMIAMQKASLSLQLTVQVRNKLVEAYQEIMRMQV 89
 
Name Accession Description Interval E-value
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
17-90 2.79e-30

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 102.26  E-value: 2.79e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1308675752 17 QSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQEIMRMQI 90
Cdd:pfam02049 16 GGGSFASVLKDALDEVNQTQQEAEALAEAFATGEPVDLHDVMIAMQKASLSLQLTVQVRNKLVEAYQEIMRMQV 89
fliE PRK12728
flagellar hook-basal body protein FliE; Provisional
 1-90 8.58e-30

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 237183  Cd Length: 102  Bit Score: 101.57  E-value: 8.58e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   1 MIQPGQRITEQKPVDDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIE 80
Cdd:PRK12728   13 FDQNGSNKTNKNNPAEAQKSFSDFLKEALNKVNELQVEADNSTEKLVKGEIVDLHDVMIAAQKASISLQLTVQIRNKVVE 92

                          90
                  ....*....|
gi 1308675752  81 AYQEIMRMQI 90
Cdd:PRK12728   93 AYQEIMRMQL 102
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
1-90 3.93e-29

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 100.04  E-value: 3.93e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   1 MIQPGQRITEQKPVDDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIE 80
Cdd:COG1677    16 LAAQAAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKSVDLHDVMIAMQKASLSLQLTVQVRNKLVE 95

                          90
                  ....*....|
gi 1308675752  81 AYQEIMRMQI 90
Cdd:COG1677    96 AYQEIMRMQV 105
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 6-89 2.52e-15

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 64.95  E-value: 2.52e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   6 QRITEQKPvdDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTG-QIDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQE 84
Cdd:TIGR00205  26 LFSSKSKA--QDNDSFSDLLKNSITDLNKTQLASDKVTEQAALGpSSVDLHDVMIAMQKASMSMSILKEVRNKAVKAYQE 103


                  ....*
gi 1308675752  85 IMRMQ 89
Cdd:TIGR00205 104 IMRMQ 108
 
Name Accession Description Interval E-value
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
17-90 2.79e-30

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 102.26  E-value: 2.79e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1308675752 17 QSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQEIMRMQI 90
Cdd:pfam02049 16 GGGSFASVLKDALDEVNQTQQEAEALAEAFATGEPVDLHDVMIAMQKASLSLQLTVQVRNKLVEAYQEIMRMQV 89
fliE PRK12728
flagellar hook-basal body protein FliE; Provisional
 1-90 8.58e-30

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 237183  Cd Length: 102  Bit Score: 101.57  E-value: 8.58e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   1 MIQPGQRITEQKPVDDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIE 80
Cdd:PRK12728   13 FDQNGSNKTNKNNPAEAQKSFSDFLKEALNKVNELQVEADNSTEKLVKGEIVDLHDVMIAAQKASISLQLTVQIRNKVVE 92

                          90
                  ....*....|
gi 1308675752  81 AYQEIMRMQI 90
Cdd:PRK12728   93 AYQEIMRMQL 102
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
1-90 3.93e-29

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 100.04  E-value: 3.93e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   1 MIQPGQRITEQKPVDDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIE 80
Cdd:COG1677    16 LAAQAAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKSVDLHDVMIAMQKASLSLQLTVQVRNKLVE 95

                          90
                  ....*....|
gi 1308675752  81 AYQEIMRMQI 90
Cdd:COG1677    96 AYQEIMRMQV 105
fliE PRK00253
flagellar hook-basal body protein FliE; Reviewed
 1-90 7.71e-21

flagellar hook-basal body protein FliE; Reviewed


Pssm-ID: 178948  Cd Length: 108  Bit Score: 79.23  E-value: 7.71e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   1 MIQPGQRITEQKPVDDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQID-DIAQVMIAAEKSNIAFQLTLQIRNKVI 79
Cdd:PRK00253   18 AMEASGQAKPAQGAAVGTADFAGQLKAALDKVNDTQQAARTLAEKFELGDPGvSLNDVMIALQKASVSFQAGIQVRNKLV 97

                          90
                  ....*....|.
gi 1308675752  80 EAYQEIMRMQI 90
Cdd:PRK00253   98 AAYQEIMNMQV 108
fliE PRK03907
flagellar hook-basal body complex protein FliE;
20-90 1.97e-15

flagellar hook-basal body complex protein FliE;


Pssm-ID: 235173  Cd Length: 97  Bit Score: 65.25  E-value: 1.97e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1308675752 20 GFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQEIMRMQI 90
Cdd:PRK03907  27 EFSKLLKQSINELNKTQEQSEKALADIATGQVKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKEILRTQI 97
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 6-89 2.52e-15

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 64.95  E-value: 2.52e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   6 QRITEQKPvdDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTG-QIDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQE 84
Cdd:TIGR00205  26 LFSSKSKA--QDNDSFSDLLKNSITDLNKTQLASDKVTEQAALGpSSVDLHDVMIAMQKASMSMSILKEVRNKAVKAYQE 103


                  ....*
gi 1308675752  85 IMRMQ 89
Cdd:TIGR00205 104 IMRMQ 108
fliE PRK00732
flagellar hook-basal body complex protein FliE;
12-90 2.45e-09

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179101  Cd Length: 102  Bit Score: 49.75  E-value: 2.45e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1308675752  12 KPVDDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQiDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQEIMRMQI 90
Cdd:PRK00732   25 GGGDKGGPSFGALLKDAMGSVLEAGRKSDAQTAAMASGK-ANLMDVVTAVAETDVAVSTLVSVRDRVIQAYEEIMRMPI 102
fliE PRK12729
flagellar hook-basal body protein FliE; Provisional
 6-89 2.22e-08

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 183707  Cd Length: 127  Bit Score: 47.72  E-value: 2.22e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1308675752   6 QRITEQKPVDDQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVtgqID----DIAQVMIAAEKSNIAFQLTLQIRNKVIEA 81
Cdd:PRK12729   43 KDVKQPVSPDYVAESFSEAMKNALTSVNDLQVEADELTQKMV---FDpnsvDAHDVMIASEKARVALTFTKTIADGVVRA 119


                  ....*...
gi 1308675752  82 YQEIMRMQ 89
Cdd:PRK12729  120 YRELTSLR 127
fliE PRK00790
flagellar hook-basal body complex protein FliE;
17-90 1.16e-06

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179126  Cd Length: 109  Bit Score: 42.72  E-value: 1.16e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1308675752  17 QSVGFGDLLKQAI-DEVNSLdQQSSDMKTKLVTGQID--DIAQVMIAAEKsniAFQLTLQIRNKVIEAYQEIMRMQI 90
Cdd:PRK00790   37 PGASFASVLGQMAgDAVQTL-KAAEATSIQAIKGKADtrEVVDAVMQAEQ---ALQTAVAIRDKVVEAYLEILRMPI 109
fliE PRK01699
flagellar hook-basal body complex protein FliE;
16-90 6.34e-03

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179322  Cd Length: 99  Bit Score: 33.06  E-value: 6.34e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1308675752 16 DQSVGFGDLLKQAIDEVNSLDQQSSDMKTKLVTGQIDDIAQVMIAAEKSNIAFQLTLQIRNKVIEAYQEIMRMQI 90
Cdd:PRK01699  25 QTSVVEGKKFIDLLEDMNQTQNNAQTAVYDLLTKGVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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