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Conserved domains on  [gi|1304834650|gb|AUD52600|]
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sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, partial [Cryptobatrachus sp. TNHC-GDC 451]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 91-282 3.41e-29

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 111.67  E-value: 3.41e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  91 GTTIQYTCMDGFLLR--GPHEITCESDGnWSPdLPNCVPIECPQPDEIPNGIVDVQGLTYLSTVLYTCKPGFELMGNATL 168
Cdd:PHA02927   47 GDTIEYLCLPGYRKQkmGPIYAKCTGTG-WTL-FNQCIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 169 IC--GPLGH--WLGGLPVCKPIRCPGAKDIPNGKSSSNSLHY--GQTVTYSCNKGFRLEGQPIITCmETGEWdADPPTCK 242
Cdd:PHA02927  125 YCelGSTGSmvWNPEAPICESVKCQSPPSISNGRHNGYEDFYtdGSVVTYSCNSGYSLIGNSGVLC-SGGEW-SDPPTCQ 202

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1304834650 243 EIACdPPQAIDNGFVEGA---DYRYGAMIIYSCMPGFQLTGPA 282
Cdd:PHA02927  203 IVKC-PHPTISNGYLSSGfkrSYSYNDNVDFKCKYGYKLSGSS 244
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 4-126 1.80e-12

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 65.83  E-value: 1.80e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   4 QLPTCVPSKCQEPPLLQH--QLVLKEVANETGVVKFSCREGYVLQGSSVLRClPSQHWNDSfPLCKLVLCPKPpDIDFGD 81
Cdd:PHA02927  139 EAPICESVKCQSPPSISNgrHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSDP-PTCQIVKCPHP-TISNGY 215

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1304834650  82 PKS--VPSLHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNCV 126
Cdd:PHA02927  216 LSSgfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKCV 262
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 91-282 3.41e-29

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 111.67  E-value: 3.41e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  91 GTTIQYTCMDGFLLR--GPHEITCESDGnWSPdLPNCVPIECPQPDEIPNGIVDVQGLTYLSTVLYTCKPGFELMGNATL 168
Cdd:PHA02927   47 GDTIEYLCLPGYRKQkmGPIYAKCTGTG-WTL-FNQCIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 169 IC--GPLGH--WLGGLPVCKPIRCPGAKDIPNGKSSSNSLHY--GQTVTYSCNKGFRLEGQPIITCmETGEWdADPPTCK 242
Cdd:PHA02927  125 YCelGSTGSmvWNPEAPICESVKCQSPPSISNGRHNGYEDFYtdGSVVTYSCNSGYSLIGNSGVLC-SGGEW-SDPPTCQ 202

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1304834650 243 EIACdPPQAIDNGFVEGA---DYRYGAMIIYSCMPGFQLTGPA 282
Cdd:PHA02927  203 IVKC-PHPTISNGYLSSGfkrSYSYNDNVDFKCKYGYKLSGSS 244
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 188-242 4.82e-13

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 62.48  E-value: 4.82e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304834650 188 CPGAKDIPNG--KSSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTCK 242
Cdd:cd00033     1 CPPPPVPENGtvTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 4-126 1.80e-12

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 65.83  E-value: 1.80e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   4 QLPTCVPSKCQEPPLLQH--QLVLKEVANETGVVKFSCREGYVLQGSSVLRClPSQHWNDSfPLCKLVLCPKPpDIDFGD 81
Cdd:PHA02927  139 EAPICESVKCQSPPSISNgrHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSDP-PTCQIVKCPHP-TISNGY 215

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1304834650  82 PKS--VPSLHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNCV 126
Cdd:PHA02927  216 LSSgfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKCV 262
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 188-241 7.84e-12

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 59.08  E-value: 7.84e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650  188 CPGAKDIPNGK--SSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:smart00032   1 CPPPPDIENGTvtSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
188-241 1.33e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.89  E-value: 1.33e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650 188 CPGAKDIPNGK--SSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:pfam00084   1 CPPPPDIPNGKvsATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 13-67 6.76e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 45.53  E-value: 6.76e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304834650  13 CQEPPLLQHQLV--LKEVANETGVVKFSCREGYVLQGSSVLRCLPSQHWNDSFPLCK 67
Cdd:cd00033     1 CPPPPVPENGTVtgSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 13-66 4.69e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 43.28  E-value: 4.69e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650   13 CQEPPLLQH-QLVLKEVANETG-VVKFSCREGYVLQGSSVLRCLPSQHWNDSFPLC 66
Cdd:smart00032   1 CPPPPDIENgTVTSSSGTYSYGdTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
13-66 3.30e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 40.56  E-value: 3.30e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650  13 CQEPPLLQHQLV--LKEVANETGVVKFSCREGYVLQGSSVLRCLPSQHWNDSFPLC 66
Cdd:pfam00084   1 CPPPPDIPNGKVsaTKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 91-282 3.41e-29

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 111.67  E-value: 3.41e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  91 GTTIQYTCMDGFLLR--GPHEITCESDGnWSPdLPNCVPIECPQPDEIPNGIVDVQGLTYLSTVLYTCKPGFELMGNATL 168
Cdd:PHA02927   47 GDTIEYLCLPGYRKQkmGPIYAKCTGTG-WTL-FNQCIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKS 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 169 IC--GPLGH--WLGGLPVCKPIRCPGAKDIPNGKSSSNSLHY--GQTVTYSCNKGFRLEGQPIITCmETGEWdADPPTCK 242
Cdd:PHA02927  125 YCelGSTGSmvWNPEAPICESVKCQSPPSISNGRHNGYEDFYtdGSVVTYSCNSGYSLIGNSGVLC-SGGEW-SDPPTCQ 202

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1304834650 243 EIACdPPQAIDNGFVEGA---DYRYGAMIIYSCMPGFQLTGPA 282
Cdd:PHA02927  203 IVKC-PHPTISNGYLSSGfkrSYSYNDNVDFKCKYGYKLSGSS 244
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 35-241 6.95e-23

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 94.72  E-value: 6.95e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  35 VKFSCREGYVLQ--GSSVLRCLPSQhWNdSFPLCKLVLCPKPPDIDFGDpKSVPSLHYGTTIQYTCMDGFLLRGPHEITC 112
Cdd:PHA02927   50 IEYLCLPGYRKQkmGPIYAKCTGTG-WT-LFNQCIKRRCPSPRDIDNGQ-LDIGGVDFGSSITYSCNSGYQLIGESKSYC 126

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 113 E--SDGN--WSPDLPNCVPIECPQPDEIPNGIVDVQGLTYL--STVLYTCKPGFELMGNATLICGPlGHWlGGLPVCKPI 186
Cdd:PHA02927  127 ElgSTGSmvWNPEAPICESVKCQSPPSISNGRHNGYEDFYTdgSVVTYSCNSGYSLIGNSGVLCSG-GEW-SDPPTCQIV 204

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1304834650 187 RCPGAKdIPNGKSSSN---SLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:PHA02927  205 KCPHPT-ISNGYLSSGfkrSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 8-183 2.12e-18

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 82.39  E-value: 2.12e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   8 CVPSKCQEPPLLQHQLVLKEVANETGVVKFSCREGYVLQGSSVLRC----LPSQHWNDSFPLCKLVLCPKPPDIDFGDPK 83
Cdd:PHA02927   81 CIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYQLIGESKSYCelgsTGSMVWNPEAPICESVKCQSPPSISNGRHN 160

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  84 SVPSLHY-GTTIQYTCMDGFLLRGPHEITCeSDGNWSpDLPNCVPIECPQPdEIPNGIVDV---QGLTYLSTVLYTCKPG 159
Cdd:PHA02927  161 GYEDFYTdGSVVTYSCNSGYSLIGNSGVLC-SGGEWS-DPPTCQIVKCPHP-TISNGYLSSgfkRSYSYNDNVDFKCKYG 237

                         170       180
                  ....*....|....*....|....
gi 1304834650 160 FELMGNATLICGPLGHWLGGLPVC 183
Cdd:PHA02927  238 YKLSGSSSSTCSPGNTWQPELPKC 261
PHA02817 PHA02817
EEV Host range protein; Provisional
 60-183 1.27e-16

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 76.90  E-value: 1.27e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  60 NDSFPLCKLVLCPKPPDIDFG---DPKSVPSLhyGTTIQYTCMDG-----FLLRGPHEITCESDGNWSPDLPNCVPIECP 131
Cdd:PHA02817   13 NKVYSLCDLNKCCYPPSIKNGyiyNKKTEYNI--GSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCR 90

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1304834650 132 QP---DEIPNGIVDVQGLTYLSTVLYTCKPGFELMGNATLICGPLGHWLGGLPVC 183
Cdd:PHA02817   91 FPalqNGFVNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPIC 145
PHA02639 PHA02639
EEV host range protein; Provisional
 34-186 1.63e-15

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 75.09  E-value: 1.63e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  34 VVKFSCREGYVLQGSSVLRCLPSQH---WNDSFPLCKLVLCPKPPDIDFGDPKSVPSLH-YGTTIQYTCMD----GFLLR 105
Cdd:PHA02639   45 LIEYTCNTDYALIGDRFRTCIKDKNnaiWSNKAPFCMLKECNDPPSIINGKIYNKREMYkVGDEIYYVCNEhkgvQYSLV 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 106 GPHEITCESDGNWSPDLPNCVPIECPQP---DEIPNGIVDVQGLTYLSTVLYTCKPGFELMGNATLICGPLGHWLGGLPV 182
Cdd:PHA02639  125 GNEKITCIQDKSWKPDPPICKMINCRFPalqNGYINGIPSNKKFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPSIPT 204


                  ....*..
gi 1304834650 183 C---KPI 186
Cdd:PHA02639  205 CvrnKPI 211
PHA02639 PHA02639
EEV host range protein; Provisional
 67-241 2.00e-15

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 74.70  E-value: 2.00e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  67 KLVLCPKPPDIDFG-DPKSVPSLHYGTTIQYTCMDGFLLRGPHEITCESDGN---WSPDLPNCVPIECPQPDEIPNGIVD 142
Cdd:PHA02639   18 KSIYCDKPDDISNGfITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKNnaiWSNKAPFCMLKECNDPPSIINGKIY 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 143 VQGLTYL--STVLYTCKP----GFELMGNATLICGPLGHWLGGLPVCKPIRC--PGAKD-IPNGKSSSNSLHYGQTVTYS 213
Cdd:PHA02639   98 NKREMYKvgDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICKMINCrfPALQNgYINGIPSNKKFYYKTRVGFS 177

                         170       180
                  ....*....|....*....|....*...
gi 1304834650 214 CNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:PHA02639  178 CKSGFDLVGEKYSTCNINATWFPSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 130-280 8.79e-14

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 70.08  E-value: 8.79e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 130 CPQPDEIPNGIVD--VQGLTYLSTVLYTCKPGFELMGNATLICGPLGH---WLGGLPVCKPIRCPGAKDIPNGKSSSNSL 204
Cdd:PHA02639   22 CDKPDDISNGFITelMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKNnaiWSNKAPFCMLKECNDPPSIINGKIYNKRE 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 205 HY--GQTVTYSCN--KG--FRLEGQPIITCMETGEWDADPPTCKEIACDPPqAIDNGFVEG----ADYRYGAMIIYSCMP 274
Cdd:PHA02639  102 MYkvGDEIYYVCNehKGvqYSLVGNEKITCIQDKSWKPDPPICKMINCRFP-ALQNGYINGipsnKKFYYKTRVGFSCKS 180


                  ....*.
gi 1304834650 275 GFQLTG 280
Cdd:PHA02639  181 GFDLVG 186
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 188-242 4.82e-13

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 62.48  E-value: 4.82e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304834650 188 CPGAKDIPNG--KSSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTCK 242
Cdd:cd00033     1 CPPPPVPENGtvTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 4-126 1.80e-12

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 65.83  E-value: 1.80e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   4 QLPTCVPSKCQEPPLLQH--QLVLKEVANETGVVKFSCREGYVLQGSSVLRClPSQHWNDSfPLCKLVLCPKPpDIDFGD 81
Cdd:PHA02927  139 EAPICESVKCQSPPSISNgrHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSDP-PTCQIVKCPHP-TISNGY 215

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1304834650  82 PKS--VPSLHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNCV 126
Cdd:PHA02927  216 LSSgfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKCV 262
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 71-126 3.18e-12

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 60.17  E-value: 3.18e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304834650  71 CPKPPDIDFGDPK-SVPSLHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNCV 126
Cdd:cd00033     1 CPPPPVPENGTVTgSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 188-241 7.84e-12

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 59.08  E-value: 7.84e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650  188 CPGAKDIPNGK--SSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:smart00032   1 CPPPPDIENGTvtSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 8-126 9.79e-12

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 63.04  E-value: 9.79e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   8 CVPSKCQEPPLLQHQLVL--KEVANETGVVKFSCREG-----YVLQGSSVLRCLPSQHWNDSFPLCKLVLCpKPPDIDFG 80
Cdd:PHA02817   19 CDLNKCCYPPSIKNGYIYnkKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRC-RFPALQNG 97

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1304834650  81 DPKSVPS---LHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNCV 126
Cdd:PHA02817   98 FVNGIPDskkFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICS 146
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 71-125 2.13e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 57.92  E-value: 2.13e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650   71 CPKPPDIDFGDPKSV-PSLHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNC 125
Cdd:smart00032   1 CPPPPDIENGTVTSSsGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 183-280 5.51e-11

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 61.11  E-value: 5.51e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 183 CKPIRCPGAKDIPNGKSSSNSLHY--GQTVTYSCNKG-----FRLEGQPIITCMETGEWDADPPTCKEIACDPPqAIDNG 255
Cdd:PHA02817   19 CDLNKCCYPPSIKNGYIYNKKTEYniGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFP-ALQNG 97

                          90       100
                  ....*....|....*....|....*....
gi 1304834650 256 FVEG----ADYRYGAMIIYSCMPGFQLTG 280
Cdd:PHA02817   98 FVNGipdsKKFYYESEVSFSCKPGFVLIG 126
PHA02831 PHA02831
EEV host range protein; Provisional
 94-241 5.71e-11

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 61.55  E-value: 5.71e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  94 IQYTCMDGFllrGPHEITCeSDGNWSPDLPNCVPIECPQPDEIPNGIVDVQGLTYL--STVLYTCKPG----FELMGNAT 167
Cdd:PHA02831   46 LEYKCNNNF---DKVFVTC-NNGSWSTKNMCIGKRNCKDPVTILNGYIKNKKDQYSfgDSVTYACKVNklekYSIVGNET 121

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650 168 LICGPlGHWLGGLPVCKPIRCPgAKDIPNG--KSSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:PHA02831  122 VKCIN-KQWVPKYPVCKLIRCK-YPALQNGflNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKC 195
PHA02817 PHA02817
EEV Host range protein; Provisional
 125-241 1.21e-10

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 59.95  E-value: 1.21e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 125 CVPIECPQPDEIPNGIVDVQGLTYL--STVLYTC---KPG--FELMGNATLICGPLGHWLGGLPVCKPIRC--PGAKD-I 194
Cdd:PHA02817   19 CDLNKCCYPPSIKNGYIYNKKTEYNigSNVTFFCgnnTRGvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCrfPALQNgF 98

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1304834650 195 PNGKSSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:PHA02817   99 VNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPIC 145
PHA02639 PHA02639
EEV host range protein; Provisional
 6-126 6.28e-10

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 58.52  E-value: 6.28e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   6 PTCVPSKCQEPPLLQHQLVL--KEVANETGVVKFSCRE----GYVLQGSSVLRCLPSQHWNDSFPLCKLVLCpKPPDIDF 79
Cdd:PHA02639   78 PFCMLKECNDPPSIINGKIYnkREMYKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICKMINC-RFPALQN 156

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1304834650  80 GDPKSVPS---LHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNCV 126
Cdd:PHA02639  157 GYINGIPSnkkFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPSIPTCV 206
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 130-184 7.50e-10

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 53.62  E-value: 7.50e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304834650 130 CPQPDEIPNGIVDVQGLTYL--STVLYTCKPGFELMGNATLICGPLGHWLGGLPVCK 184
Cdd:cd00033     1 CPPPPVPENGTVTGSKGSYSygSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
Sushi pfam00084
Sushi repeat (SCR repeat);
188-241 1.33e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.89  E-value: 1.33e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650 188 CPGAKDIPNGK--SSSNSLHYGQTVTYSCNKGFRLEGQPIITCMETGEWDADPPTC 241
Cdd:pfam00084   1 CPPPPDIPNGKvsATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 130-183 2.17e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 52.53  E-value: 2.17e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650  130 CPQPDEIPNGIVDVQGLTYL--STVLYTCKPGFELMGNATLICGPLGHWLGGLPVC 183
Cdd:smart00032   1 CPPPPDIENGTVTSSSGTYSygDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
71-125 2.64e-09

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.12  E-value: 2.64e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650  71 CPKPPDIDFGDPKS-VPSLHYGTTIQYTCMDGFLLRGPHEITCESDGNWSPDLPNC 125
Cdd:pfam00084   1 CPPPPDIPNGKVSAtKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
PHA02831 PHA02831
EEV host range protein; Provisional
 35-126 2.76e-09

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 56.54  E-value: 2.76e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  35 VKFSCR----EGYVLQGSSVLRCLPSQhWNDSFPLCKLVLCpKPPDIDFGDPKSV-PSLHYGTTIQYTCMDGFLLRGPHE 109
Cdd:PHA02831  102 VTYACKvnklEKYSIVGNETVKCINKQ-WVPKYPVCKLIRC-KYPALQNGFLNVFeKKFYYGDIVNFKCKKGFILLGSSV 179

                          90
                  ....*....|....*..
gi 1304834650 110 ITCESDGNWSPDLPNCV 126
Cdd:PHA02831  180 STCDINSIWYPGIPKCV 196
PHA02831 PHA02831
EEV host range protein; Provisional
 154-280 1.28e-08

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 54.61  E-value: 1.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 154 YTCKPGFElmgNATLICGPlGHWLGGLPVCKPIRCPGAKDIPNG--KSSSNSLHYGQTVTYSC--NK--GFRLEGQPIIT 227
Cdd:PHA02831   48 YKCNNNFD---KVFVTCNN-GSWSTKNMCIGKRNCKDPVTILNGyiKNKKDQYSFGDSVTYACkvNKleKYSIVGNETVK 123

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1304834650 228 CMEtGEWDADPPTCKEIACDPPqAIDNGFVEG--ADYRYGAMIIYSCMPGFQLTG 280
Cdd:PHA02831  124 CIN-KQWVPKYPVCKLIRCKYP-ALQNGFLNVfeKKFYYGDIVNFKCKKGFILLG 176
Sushi pfam00084
Sushi repeat (SCR repeat);
130-183 8.31e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 47.88  E-value: 8.31e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650 130 CPQPDEIPNGIVDVQGLTYL--STVLYTCKPGFELMGNATLICGPLGHWLGGLPVC 183
Cdd:pfam00084   1 CPPPPDIPNGKVSATKNEYNygASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 13-67 6.76e-07

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 45.53  E-value: 6.76e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304834650  13 CQEPPLLQHQLV--LKEVANETGVVKFSCREGYVLQGSSVLRCLPSQHWNDSFPLCK 67
Cdd:cd00033     1 CPPPPVPENGTVtgSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 13-66 4.69e-06

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 43.28  E-value: 4.69e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650   13 CQEPPLLQH-QLVLKEVANETG-VVKFSCREGYVLQGSSVLRCLPSQHWNDSFPLC 66
Cdd:smart00032   1 CPPPPDIENgTVTSSSGTYSYGdTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 157-280 1.22e-05

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 45.85  E-value: 1.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 157 KPGFELMGNATLICGPLGHWL------GGLPVCKPIRCPGAKDIP------NGKSSSNSLHYGQTVTYSCNKGFRLEGQP 224
Cdd:PHA02954   88 KPLYEVNSTITLICKDETKYFrceeknGNTSWNDTVTCPNAECQPlqlehgSCQPVKEKYSFGEHITINCDVGYEVIGAS 167

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650 225 IITCMeTGEWDAdPPTCKEiACDPPqAIDNGFVEGADYRYGAMIIYSCMPGFQLTG 280
Cdd:PHA02954  168 YISCT-ANSWNV-IPSCQQ-KCDIP-SLSNGLISGSTFSIGGVIHLSCKSGFTLTG 219
Sushi pfam00084
Sushi repeat (SCR repeat);
246-281 2.90e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 40.95  E-value: 2.90e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1304834650 246 CDPPQAIDNGFVEGAD--YRYGAMIIYSCMPGFQLTGP 281
Cdd:pfam00084   1 CPPPPDIPNGKVSATKneYNYGASVSYECDPGYRLVGS 38
Sushi pfam00084
Sushi repeat (SCR repeat);
13-66 3.30e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 40.56  E-value: 3.30e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650  13 CQEPPLLQHQLV--LKEVANETGVVKFSCREGYVLQGSSVLRCLPSQHWNDSFPLC 66
Cdd:pfam00084   1 CPPPPDIPNGKVsaTKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 5-241 2.02e-04

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 42.00  E-value: 2.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   5 LPTCVPSKCQEPPLLQHQLVLKEVA-NETGVVKFSCREGYVLQGSSVLrcLPSQHWNDSFPLCKLvlCPKPPDIDfgDPK 83
Cdd:PHA02954   13 LPAVVYSTCTVPTMNNAKLTSTETSfNDKQKVTFTCDSGYYSLDPNAV--CETDKWKYENPCKKM--CTVSDYVS--ELY 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650  84 SVPSLHYGTTIQYTCMDGfllrgPHEITCES-DGNWS-PDLPNCVPIECpQPDEIPNGIVD--VQGLTYLSTVLYTCKPG 159
Cdd:PHA02954   87 DKPLYEVNSTITLICKDE-----TKYFRCEEkNGNTSwNDTVTCPNAEC-QPLQLEHGSCQpvKEKYSFGEHITINCDVG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650 160 FELMGNATLICGPlGHWlGGLPVCKPiRCpgakDIP---NGKSSSNSLHYGQTVTYSCNKGFRLEGQPIITCMEtGEWDA 236
Cdd:PHA02954  161 YEVIGASYISCTA-NSW-NVIPSCQQ-KC----DIPslsNGLISGSTFSIGGVIHLSCKSGFTLTGSPSSTCID-GKWNP 232


                  ....*
gi 1304834650 237 DPPTC 241
Cdd:PHA02954  233 VLPIC 237
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 246-282 2.61e-04

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 38.21  E-value: 2.61e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1304834650 246 CDPPQAIDNGFVEG--ADYRYGAMIIYSCMPGFQLTGPA 282
Cdd:cd00033     1 CPPPPVPENGTVTGskGSYSYGSTVTYSCNEGYTLVGSS 39
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 246-282 2.77e-04

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 38.28  E-value: 2.77e-04
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1304834650  246 CDPPQAIDNGFVEG--ADYRYGAMIIYSCMPGFQLTGPA 282
Cdd:smart00032   1 CPPPPDIENGTVTSssGTYSYGDTVTYSCDPGYTLIGSS 39
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 7-150 6.74e-03

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 37.37  E-value: 6.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304834650   7 TCVPSKCQePPLLQHQLV--LKEVANETGVVKFSCREGYVLQGSSVLRClPSQHWNdSFPLCKLVlCPKPPDIDFGDPKS 84
Cdd:PHA02954  124 TCPNAECQ-PLQLEHGSCqpVKEKYSFGEHITINCDVGYEVIGASYISC-TANSWN-VIPSCQQK-CDIPSLSNGLISGS 199

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1304834650  85 VPSLhyGTTIQYTCMDGFLLRGPHEITCeSDGNWSPDLPNCVPIEcPQPDEIPNGIVDVQGLTYLS 150
Cdd:PHA02954  200 TFSI--GGVIHLSCKSGFTLTGSPSSTC-IDGKWNPVLPICVRSN-EEFDPVDDGPDDETDLSKLS 261
E3_UbLigase_R4 pfam13764
E3 ubiquitin-protein ligase UBR4; This is a family of E3 ubiquitin ligase enzymes.
 15-51 9.90e-03

E3 ubiquitin-protein ligase UBR4; This is a family of E3 ubiquitin ligase enzymes.


Pssm-ID: 433459  Cd Length: 807  Bit Score: 37.24  E-value: 9.90e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1304834650  15 EPPLLQHqlvLKEVANETGVVKFSCREGYVLQGSSVL 51
Cdd:pfam13764 460 SPSILEQ---LEDLEEEDGLTCMICREGYKFQPTKVL 493
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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