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Conserved domains on  [gi|1304171663|gb|PKC43688|]
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hypothetical protein CK202_4918 [Plasmodium falciparum NF54]

Protein Classification

autoantigen p27 domain-containing protein( domain architecture ID 10535273)

autoantigen p27 domain-containing protein similar to Mus musculus Sjoegren syndrome/scleroderma autoantigen 1 homolog (also called ZNRD2 or autoantigen p27 homolog) that might play a role in mitosis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Auto_anti-p27 pfam06677
Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); This family consists of ...
 19-57 8.13e-11

Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); This family consists of several Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) sequences. It is thought that the potential association of anti-p27 with anti-centromere antibodies suggests that autoantigen p27 might play a role in mitosis.


:

Pssm-ID: 461984 [Multi-domain]  Cd Length: 38  Bit Score: 56.31  E-value: 8.13e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1304171663  19 IGDRLLQGWTLLNATCHMCNiTPLIKQKNKEdRYCARCD 57
Cdd:pfam06677   2 MGELLLQGWTMLAEHCPVCG-TPLMRDKGGE-VFCVVCG 38
 
Name Accession Description Interval E-value
Auto_anti-p27 pfam06677
Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); This family consists of ...
 19-57 8.13e-11

Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); This family consists of several Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) sequences. It is thought that the potential association of anti-p27 with anti-centromere antibodies suggests that autoantigen p27 might play a role in mitosis.


Pssm-ID: 461984 [Multi-domain]  Cd Length: 38  Bit Score: 56.31  E-value: 8.13e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1304171663  19 IGDRLLQGWTLLNATCHMCNiTPLIKQKNKEdRYCARCD 57
Cdd:pfam06677   2 MGELLLQGWTMLAEHCPVCG-TPLMRDKGGE-VFCVVCG 38
 
Name Accession Description Interval E-value
Auto_anti-p27 pfam06677
Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); This family consists of ...
 19-57 8.13e-11

Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); This family consists of several Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) sequences. It is thought that the potential association of anti-p27 with anti-centromere antibodies suggests that autoantigen p27 might play a role in mitosis.


Pssm-ID: 461984 [Multi-domain]  Cd Length: 38  Bit Score: 56.31  E-value: 8.13e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1304171663  19 IGDRLLQGWTLLNATCHMCNiTPLIKQKNKEdRYCARCD 57
Cdd:pfam06677   2 MGELLLQGWTMLAEHCPVCG-TPLMRDKGGE-VFCVVCG 38
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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