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Conserved domains on  [gi|1304108791|gb|AUC69379|]
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ribulose-phosphate 3-epimerase [Listeria monocytogenes]

Protein Classification

ribulose-phosphate 3-epimerase( domain architecture ID 10784968)

ribulose-phosphate 3-epimerase catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate

CATH:  3.20.20.70
Gene Ontology:  GO:0006098|GO:0016857|GO:0004750|GO:0046872|GO:0005975
PubMed:  12206759|11257493
SCOP:  4003059

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Rpe COG0036
Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; ...
 5-217 5.31e-97

Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Pentose-5-phosphate-3-epimerase is part of the Pathway/BioSystem: Pentose phosphate pathway


:

Pssm-ID: 439806  Cd Length: 218  Bit Score: 281.58  E-value: 5.31e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   5 LICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKG 84
Cdd:COG0036     2 KIAPSILSADFANLGEEVKRVEAAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTDLPLDVHLMIENPDRYIEAFAEAG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  85 ADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVEL- 163
Cdd:COG0036    82 ADIITVHAEATPHLHRTLQLIKELGAKAGVALNPATPLEALEYVLDDVDLVLVMSVNPGFGGQKFIPSVLEKIRRLRELi 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1304108791 164 -KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFgKKESYAEIIKKLKQE 217
Cdd:COG0036   162 dERGLDILIEVDGGINAETIPELAEAGADVLVAG-SAVF-GAEDYAAAIAALREA 214
 
Name Accession Description Interval E-value
Rpe COG0036
Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; ...
 5-217 5.31e-97

Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Pentose-5-phosphate-3-epimerase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439806  Cd Length: 218  Bit Score: 281.58  E-value: 5.31e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   5 LICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKG 84
Cdd:COG0036     2 KIAPSILSADFANLGEEVKRVEAAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTDLPLDVHLMIENPDRYIEAFAEAG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  85 ADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVEL- 163
Cdd:COG0036    82 ADIITVHAEATPHLHRTLQLIKELGAKAGVALNPATPLEALEYVLDDVDLVLVMSVNPGFGGQKFIPSVLEKIRRLRELi 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1304108791 164 -KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFgKKESYAEIIKKLKQE 217
Cdd:COG0036   162 dERGLDILIEVDGGINAETIPELAEAGADVLVAG-SAVF-GAEDYAAAIAALREA 214
RPE cd00429
Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of ...
 5-215 1.07e-95

Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.


Pssm-ID: 238244  Cd Length: 211  Bit Score: 277.82  E-value: 1.07e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   5 LICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKG 84
Cdd:cd00429     1 KIAPSILSADFANLGEELKRLEEAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTDLPLDVHLMVENPERYIEAFAKAG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  85 ADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELK 164
Cdd:cd00429    81 ADIITFHAEATDHLHRTIQLIKELGMKAGVALNPGTPVEVLEPYLDEVDLVLVMSVNPGFGGQKFIPEVLEKIRKLRELI 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1304108791 165 KD--YTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFGKKeSYAEIIKKLK 215
Cdd:cd00429   161 PEnnLNLLIEVDGGINLETIPLLAEAGADVLVAG-SALFGSD-DYAEAIKELR 211
PRK05581 PRK05581
ribulose-phosphate 3-epimerase; Validated
 1-218 7.77e-81

ribulose-phosphate 3-epimerase; Validated


Pssm-ID: 235515  Cd Length: 220  Bit Score: 240.47  E-value: 7.77e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   1 MSKKLICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMF 80
Cdd:PRK05581    1 MKMVLIAPSILSADFARLGEEVKAVEAAGADWIHVDVMDGHFVPNLTIGPPVVEAIRKVTKLPLDVHLMVENPDRYVPDF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  81 ADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAEL 160
Cdd:PRK05581   81 AKAGADIITFHVEASEHIHRLLQLIKSAGIKAGLVLNPATPLEPLEDVLDLLDLVLLMSVNPGFGGQKFIPEVLEKIREL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791 161 VEL--KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFgKKESYAEIIKKLKQEK 218
Cdd:PRK05581  161 RKLidERGLDILIEVDGGINADNIKECAEAGADVFVAG-SAVF-GAPDYKEAIDSLRAEL 218
rpe TIGR01163
ribulose-phosphate 3-epimerase; This family consists of Ribulose-phosphate 3-epimerase, also ...
 6-215 6.83e-72

ribulose-phosphate 3-epimerase; This family consists of Ribulose-phosphate 3-epimerase, also known as pentose-5-phosphate 3-epimerase (PPE). PPE converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. It has been found in a wide range of bacteria, archebacteria, fungi and plants. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 273475  Cd Length: 210  Bit Score: 217.53  E-value: 6.83e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   6 ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKGA 85
Cdd:TIGR01163   1 IAPSILSADFARLGEEVKAVEEAGADWIHVDVMDGHFVPNLTFGPPVLEALRKYTDLPIDVHLMVENPDRYIEDFAEAGA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  86 DIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVEL-- 163
Cdd:TIGR01163  81 DIITVHPEASEHIHRLLQLIKDLGAKAGIVLNPATPLEFLEYVLPDVDLVLLMSVNPGFGGQKFIPDTLEKIREVRKMid 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1304108791 164 KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFGKKEsYAEIIKKLK 215
Cdd:TIGR01163 161 ELGLSILIEVDGGVNDDNARELAEAGADILVAG-SAIFGADD-YKEVIRSLR 210
Ribul_P_3_epim pfam00834
Ribulose-phosphate 3 epimerase family; This enzyme catalyzes the conversion of D-ribulose ...
 6-201 3.18e-63

Ribulose-phosphate 3 epimerase family; This enzyme catalyzes the conversion of D-ribulose 5-phosphate into D-xylulose 5-phosphate.


Pssm-ID: 395672  Cd Length: 198  Bit Score: 195.24  E-value: 3.18e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   6 ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKGA 85
Cdd:pfam00834   2 IAPSILSADFARLGEEIKAVENAGADWLHVDVMDGHFVPNLTIGPLVVEALRPLTDLPLDVHLMVEEPDRIIPDFAKAGA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  86 DIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVEL-- 163
Cdd:pfam00834  82 DIISFHAEATPHPHRTIQLIKEAGAKAGLVLNPATPLDAIEYLLDKLDLVLLMSVNPGFGGQSFIPSVLEKIRKVRKMid 161

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1304108791 164 KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALF 201
Cdd:pfam00834 162 ERGLDTLIEVDGGIKLDNIPQIAEAGADVIVAG-SAVF 198
 
Name Accession Description Interval E-value
Rpe COG0036
Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; ...
 5-217 5.31e-97

Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Pentose-5-phosphate-3-epimerase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439806  Cd Length: 218  Bit Score: 281.58  E-value: 5.31e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   5 LICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKG 84
Cdd:COG0036     2 KIAPSILSADFANLGEEVKRVEAAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTDLPLDVHLMIENPDRYIEAFAEAG 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  85 ADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVEL- 163
Cdd:COG0036    82 ADIITVHAEATPHLHRTLQLIKELGAKAGVALNPATPLEALEYVLDDVDLVLVMSVNPGFGGQKFIPSVLEKIRRLRELi 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1304108791 164 -KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFgKKESYAEIIKKLKQE 217
Cdd:COG0036   162 dERGLDILIEVDGGINAETIPELAEAGADVLVAG-SAVF-GAEDYAAAIAALREA 214
RPE cd00429
Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of ...
 5-215 1.07e-95

Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.


Pssm-ID: 238244  Cd Length: 211  Bit Score: 277.82  E-value: 1.07e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   5 LICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKG 84
Cdd:cd00429     1 KIAPSILSADFANLGEELKRLEEAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTDLPLDVHLMVENPERYIEAFAKAG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  85 ADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELK 164
Cdd:cd00429    81 ADIITFHAEATDHLHRTIQLIKELGMKAGVALNPGTPVEVLEPYLDEVDLVLVMSVNPGFGGQKFIPEVLEKIRKLRELI 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1304108791 165 KD--YTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFGKKeSYAEIIKKLK 215
Cdd:cd00429   161 PEnnLNLLIEVDGGINLETIPLLAEAGADVLVAG-SALFGSD-DYAEAIKELR 211
PRK05581 PRK05581
ribulose-phosphate 3-epimerase; Validated
 1-218 7.77e-81

ribulose-phosphate 3-epimerase; Validated


Pssm-ID: 235515  Cd Length: 220  Bit Score: 240.47  E-value: 7.77e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   1 MSKKLICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMF 80
Cdd:PRK05581    1 MKMVLIAPSILSADFARLGEEVKAVEAAGADWIHVDVMDGHFVPNLTIGPPVVEAIRKVTKLPLDVHLMVENPDRYVPDF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  81 ADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAEL 160
Cdd:PRK05581   81 AKAGADIITFHVEASEHIHRLLQLIKSAGIKAGLVLNPATPLEPLEDVLDLLDLVLLMSVNPGFGGQKFIPEVLEKIREL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791 161 VEL--KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFgKKESYAEIIKKLKQEK 218
Cdd:PRK05581  161 RKLidERGLDILIEVDGGINADNIKECAEAGADVFVAG-SAVF-GAPDYKEAIDSLRAEL 218
rpe TIGR01163
ribulose-phosphate 3-epimerase; This family consists of Ribulose-phosphate 3-epimerase, also ...
 6-215 6.83e-72

ribulose-phosphate 3-epimerase; This family consists of Ribulose-phosphate 3-epimerase, also known as pentose-5-phosphate 3-epimerase (PPE). PPE converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. It has been found in a wide range of bacteria, archebacteria, fungi and plants. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 273475  Cd Length: 210  Bit Score: 217.53  E-value: 6.83e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   6 ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKGA 85
Cdd:TIGR01163   1 IAPSILSADFARLGEEVKAVEEAGADWIHVDVMDGHFVPNLTFGPPVLEALRKYTDLPIDVHLMVENPDRYIEDFAEAGA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  86 DIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVEL-- 163
Cdd:TIGR01163  81 DIITVHPEASEHIHRLLQLIKDLGAKAGIVLNPATPLEFLEYVLPDVDLVLLMSVNPGFGGQKFIPDTLEKIREVRKMid 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1304108791 164 KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALFGKKEsYAEIIKKLK 215
Cdd:TIGR01163 161 ELGLSILIEVDGGVNDDNARELAEAGADILVAG-SAIFGADD-YKEVIRSLR 210
PLN02334 PLN02334
ribulose-phosphate 3-epimerase
 1-218 2.14e-64

ribulose-phosphate 3-epimerase


Pssm-ID: 215192  Cd Length: 229  Bit Score: 199.07  E-value: 2.14e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   1 MSKKLICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMF 80
Cdd:PLN02334    5 KNDAIIAPSILSADFANLAEEAKRVLDAGADWLHVDVMDGHFVPNLTIGPPVVKALRKHTDAPLDCHLMVTNPEDYVPDF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  81 ADKGADIIYIHPE--ADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLP--LVDNVMVMTVNPGFAGQKYLDYVDVK 156
Cdd:PLN02334   85 AKAGASIFTFHIEqaSTIHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEkgLVDMVLVMSVEPGFGGQSFIPSMMDK 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1304108791 157 IAelvELKKDYT-FEIMVDGAISPEKISKLSQLGVKGFVLGtSALFGKKEsYAEIIKKLKQEK 218
Cdd:PLN02334  165 VR---ALRKKYPeLDIEVDGGVGPSTIDKAAEAGANVIVAG-SAVFGAPD-YAEVISGLRASV 222
Ribul_P_3_epim pfam00834
Ribulose-phosphate 3 epimerase family; This enzyme catalyzes the conversion of D-ribulose ...
 6-201 3.18e-63

Ribulose-phosphate 3 epimerase family; This enzyme catalyzes the conversion of D-ribulose 5-phosphate into D-xylulose 5-phosphate.


Pssm-ID: 395672  Cd Length: 198  Bit Score: 195.24  E-value: 3.18e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   6 ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKGA 85
Cdd:pfam00834   2 IAPSILSADFARLGEEIKAVENAGADWLHVDVMDGHFVPNLTIGPLVVEALRPLTDLPLDVHLMVEEPDRIIPDFAKAGA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  86 DIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVEL-- 163
Cdd:pfam00834  82 DIISFHAEATPHPHRTIQLIKEAGAKAGLVLNPATPLDAIEYLLDKLDLVLLMSVNPGFGGQSFIPSVLEKIRKVRKMid 161

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1304108791 164 KKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGtSALF 201
Cdd:pfam00834 162 ERGLDTLIEVDGGIKLDNIPQIAEAGADVIVAG-SAVF 198
PRK09722 PRK09722
allulose-6-phosphate 3-epimerase; Provisional
 2-202 5.44e-60

allulose-6-phosphate 3-epimerase; Provisional


Pssm-ID: 236616  Cd Length: 229  Bit Score: 187.89  E-value: 5.44e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   2 SKKLICPSMMCADFSGLEREVEELDKAgSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFA 81
Cdd:PRK09722    1 MRMKISPSLMCMDLLKFKEQIEFLNSK-ADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDVHLMVTDPQDYIDQLA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  82 DKGADIIYIHPE-ADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAEL 160
Cdd:PRK09722   80 DAGADFITLHPEtINGQAFRLIDEIRRAGMKVGLVLNPETPVESIKYYIHLLDKITVMTVDPGFAGQPFIPEMLDKIAEL 159

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1304108791 161 VELKKD--YTFEIMVDGAISPEKISKLSQLGVKGFVLGTSALFG 202
Cdd:PRK09722  160 KALRERngLEYLIEVDGSCNQKTYEKLMEAGADVFIVGTSGLFN 203
PTZ00170 PTZ00170
D-ribulose-5-phosphate 3-epimerase; Provisional
 3-215 1.32e-48

D-ribulose-5-phosphate 3-epimerase; Provisional


Pssm-ID: 240303  Cd Length: 228  Bit Score: 159.00  E-value: 1.32e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   3 KKLICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQK-LVDVHLMIMNPGDYVEMFA 81
Cdd:PTZ00170    6 KAIIAPSILAADFSKLADEAQDVLSGGADWLHVDVMDGHFVPNLSFGPPVVKSLRKHLPNtFLDCHLMVSNPEKWVDDFA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  82 DKGADIIYIHPEADL-HPARTLDKIRNKGKKVGIAINPGTAIATIKELLP--LVDNVMVMTVNPGFAGQKYLDYVDVKIA 158
Cdd:PTZ00170   86 KAGASQFTFHIEATEdDPKAVARKIREAGMKVGVAIKPKTPVEVLFPLIDtdLVDMVLVMTVEPGFGGQSFMHDMMPKVR 165

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304108791 159 ELVELKKDytFEIMVDGAISPEKISKLSQLGVKGFVLGTSALfgKKESYAEIIKKLK 215
Cdd:PTZ00170  166 ELRKRYPH--LNIQVDGGINLETIDIAADAGANVIVAGSSIF--KAKDRKQAIELLR 218
PRK08005 PRK08005
ribulose-phosphate 3 epimerase family protein;
8-201 3.65e-23

ribulose-phosphate 3 epimerase family protein;


Pssm-ID: 169179  Cd Length: 210  Bit Score: 92.79  E-value: 3.65e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791   8 PSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKGADI 87
Cdd:PRK08005    5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQQTRHPLSFHLMVSSPQRWLPWLAAIRPGW 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  88 IYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVElkkdy 167
Cdd:PRK08005   85 IFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSRE----- 159

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1304108791 168 TF---EIMVDGAISPEKISKLSQLGVKGFVLGtSALF 201
Cdd:PRK08005  160 HFpaaECWADGGITLRAARLLAAAGAQHLVIG-RALF 195
PRK08091 PRK08091
ribulose-phosphate 3-epimerase; Validated
 10-218 8.96e-17

ribulose-phosphate 3-epimerase; Validated


Pssm-ID: 169215  Cd Length: 228  Bit Score: 76.07  E-value: 8.96e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  10 MMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSF---GMGLQDFeeirqKTQKLVDVHLMIMNPGDYVEMFADKGAD 86
Cdd:PRK08091   19 ILASNWLKFNETLTTLSENQLRLLHFDIADGQFSPFFtvgAIAIKQF-----PTHCFKDVHLMVRDQFEVAKACVAAGAD 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  87 IIYIHPEADLHPARTLDKIRNKGKKV--GIAINPGTAIATIKELLPLVDNVMVMTVNPGfAGQKY-LDYVDVKIAELVEL 163
Cdd:PRK08091   94 IVTLQVEQTHDLALTIEWLAKQKTTVliGLCLCPETPISLLEPYLDQIDLIQILTLDPR-TGTKApSDLILDRVIQVENR 172

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1304108791 164 KKDYTFE--IMVDGAISPEKISKLSQLGVKGFVLGtSALFgkkeSYAEIIKKLKQEK 218
Cdd:PRK08091  173 LGNRRVEklISIDGSMTLELASYLKQHQIDWVVSG-SALF----SQGELKTTLKEWK 224
PRK14057 PRK14057
epimerase; Provisional
 10-201 4.73e-16

epimerase; Provisional


Pssm-ID: 172549  Cd Length: 254  Bit Score: 74.33  E-value: 4.73e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  10 MMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKlvDVHLMIMNPGDYVEMFADKGADIIY 89
Cdd:PRK14057   26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQTFIK--DVHLMVADQWTAAQACVKAGAHCIT 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1304108791  90 IHPEADLHPARTLDKIRNKGKKV---------GIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAEL 160
Cdd:PRK14057  104 LQAEGDIHLHHTLSWLGQQTVPViggempvirGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQL 183

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1304108791 161 VELKKDYTFE--IMVDGAISPEKISKLSQLGVKGFVLGtSALF 201
Cdd:PRK14057  184 LCLLGDKREGkiIVIDGSLTQDQLPSLIAQGIDRVVSG-SALF 225
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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