|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-258 |
2.08e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 382.63 E-value: 2.08e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:MTH00112 13 LILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQLTNP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00112 93 TSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00112 173 TQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLA 252
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00112 253 GLPPLTGFMPKWLILQEL 270
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-258 |
3.53e-116 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 336.39 E-value: 3.53e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:MTH00135 13 LGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSlNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00135 93 LPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLTSTLVGGWGGLNQ 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00135 172 TQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLSLG 251
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00135 252 GLPPLTGFMPKWLILQEL 269
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-258 |
3.69e-110 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 321.10 E-value: 3.69e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:MTH00070 13 LALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQTP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00070 93 LPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGWGGLNQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00070 173 TQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLG 252
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00070 253 GLPPTTGFIPKWLILQEL 270
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-258 |
1.15e-102 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 302.15 E-value: 1.15e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:MTH00105 13 LFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTITKLTNP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00105 93 TASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGGWGGLNQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00105 173 TQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLG 252
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00105 253 GLPPLTGFMPKWMIIQEL 270
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-258 |
2.95e-81 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 247.57 E-value: 2.95e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:MTH00200 13 LGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00200 93 LSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVGGWGGLNQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00200 173 TQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLG 252
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00200 253 GLPPLTGFFPKWLILQEL 270
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-255 |
2.48e-77 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 237.52 E-value: 2.48e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:MTH00041 13 IILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00041 93 LSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00041 173 TQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLG 252
|
250
....*....|....*
gi 1290328277 241 GLPPLTGFLPKWLTI 255
Cdd:MTH00041 253 GLPPLTGFLNKFISL 267
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-258 |
6.81e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 184.64 E-value: 6.81e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGqwditqLNHP 80
Cdd:MTH00160 14 LIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM------LFNN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTspsLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00160 88 ISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIILSAIIGAIGGLNQ 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00160 165 TSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLG 244
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00160 245 GLPPFLGFLPKWIIIQLL 262
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-256 |
2.20e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 162.75 E-value: 2.20e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITqlnhp 80
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 iacTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNP-TLLSIMAIASTALGGWMGLN 159
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 160 QTQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNtTKTLKLSTMMTSWTKTPTLNATLMMTLLSL 239
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250
....*....|....*..
gi 1290328277 240 AGLPPLTGFLPKWLTIQ 256
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLI 260
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-258 |
2.20e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 159.95 E-value: 2.20e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSgqwdiTQLNHP 80
Cdd:MTH00011 15 MTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFP-----SLLKNI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTtAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00011 90 TALMLLV-SLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00011 169 TQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLG 248
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00011 249 GLPPFTGFMPKLMAIETL 266
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
1-258 |
3.79e-37 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 133.26 E-value: 3.79e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSStinawSSGQWDItqLNHP 80
Cdd:MTH00197 7 IFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG-----SLSFSNL--YLSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILfmTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:MTH00197 80 LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGIGGMNQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLA 240
Cdd:MTH00197 158 SNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLG 237
|
250
....*....|....*...
gi 1290328277 241 GLPPLTGFLPKWLTIQEL 258
Cdd:MTH00197 238 GLPPLSGFFLKWLILTSL 255
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-258 |
1.28e-33 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 126.38 E-value: 1.28e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 2 LLGTTMTISSNHWMMAWTGLEINTLAIIPLIA-KHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 I------------ACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK---FPPITILFMTS-PSLNP---TL 141
Cdd:COG1007 192 LaagganspllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAALLRLLVEAfPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 142 LSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNPKLTL--LTFY--VYCLMTITVFLTLNT-TKTLKLS 216
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYllAYLFMNLGAFAVILLlSRKGGEA 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1290328277 217 TMMTSW----TKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQEL 258
Cdd:COG1007 352 EEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
1-255 |
2.06e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 120.51 E-value: 2.06e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIA-KHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNH 79
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 80 ----PIACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSimAIASTALGGW 155
Cdd:MTH00199 186 iltgDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 156 MGLNQTQVRKILAFSSISHLGWMALILTYNP----KLTLLTFYVYCLMTITVF---LTLNTTKTLKLSTMMTSwTKTPTL 228
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260
....*....|....*....|....*..
gi 1290328277 229 NATLMMTLLSLAGLPPLTGFLPKWLTI 255
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
1-255 |
1.23e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 116.67 E-value: 1.23e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIA-KHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLN- 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 79 ------------HPIACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNptLLSIMA 146
Cdd:MTH00196 82 vlnsgqsfssvsVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 147 IASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNP----KLTLLTFYVYCLMTITVF---LTLNTTKTLKLSTMM 219
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*.
gi 1290328277 220 TSwTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTI 255
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-256 |
3.03e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.84 E-value: 3.03e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 2 LLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKH-HHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQL--- 77
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAALRrDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIaka 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 78 ------NHP---IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK---FPPIT-ILFMTSPSLNPT---L 141
Cdd:PRK05777 193 ladgsgNSLlllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 142 LSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWM--ALILTYNPKLTLLTFY--VYCLMTITVF--LTLNTTKTlKL 215
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvGLAAGTAEGYSAVLFYllAYLFMTLGAFgvISLLRRKG-GE 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1290328277 216 STMMTSWT----KTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:PRK05777 352 AESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFE 396
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
11-256 |
3.16e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 108.94 E-value: 3.16e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 11 SNHWMMAWTGLEINTLAIIPLIA-KHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQL-----------N 78
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 79 HPIACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPT------LLSIMAIASTAL 152
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 153 GGWMGLNQTQVRKILAFSSISHLGWMALIL----TYNPKLTLLTFYVYCLMTITVFL-----TLNTTKTLKLSTMMTSWT 223
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1290328277 224 KTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-258 |
3.10e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.41 E-value: 3.10e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 2 LLGTTMTISSNHWMMAWTGLEINTLAIIPLIA-KHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 ------------IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK---FPPITILFMTSPS----LNPTL 141
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFgfseAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 142 LSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNPKLTL--LTFY--VYCLMTITVFLTL------NTTK 211
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1290328277 212 TLKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQEL 258
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFAL 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-256 |
5.02e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 91.36 E-value: 5.02e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHP 80
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 I----------ACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPI-------TILFMTSPSLNP-TLL 142
Cdd:COG0651 196 LaeldpglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVyailrvlTLLFGADPALFLgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 143 SIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYC----LMTITVFLT----LNTTKTLK 214
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERATGTRD 355
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1290328277 215 LSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
39-251 |
5.73e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 82.74 E-value: 5.73e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 39 RAIEAAIKYFLTQAAASTLLLFS-STINAWSSGQWDI---------TQLNHP----IACTLLTTAIAMKLGLVPFHFWFP 104
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSpgisIALIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 105 EVLQGSSLTTAMLLSTVMKFPP-------ITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGW 177
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAAsalatriFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 178 MAL-ILTYNPKLTLLTFYVYclMTITVFLTLNTTKTLKLSTMMT----------SWTKTPTLNATLMMTLLSLAGLPPLT 246
Cdd:CHL00049 319 VIIgIIVGDSNDGYASMITY--MLFYIFMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLGGIPPLA 396
|
....*
gi 1290328277 247 GFLPK 251
Cdd:CHL00049 397 GFFGK 401
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-255 |
7.00e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 82.60 E-value: 7.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 3 LGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAI---------EAAIKYFLTQAAASTLLLFS------------ 61
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 62 --STINAWSSGQWDITQLNHPIACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFppITILFMTSPSLNP 139
Cdd:MTH00198 279 mlGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 140 TLLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNPKLTL-------LTFYVYCLMTITVFLTL----- 207
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLqaswtyaVTYLVSALASFTVICTLeefgt 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1290328277 208 -------------NTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTI 255
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
38-251 |
1.59e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 75.47 E-value: 1.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 38 PRAIEAAIKYFLTQAAASTLLLF-SSTINAWSSGQwdiTQLnHPIACTLLTTA--------------IAMKLGLVPFHFW 102
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQL-SAIALALITSPslglalalvfviagIAFKISAVPFHQW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 103 FPEVLQGSSLTTAMLLSTVMKFP----PITILFMTSPSLNP---TLLSIMAIASTALGGWMGLNQTQVRKILAFSSISHL 175
Cdd:PRK02504 233 TPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQA 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 176 GW--MALILTYNPKLTLLTFY--VYCLMTITVFLTLN----TTKTLKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTG 247
Cdd:PRK02504 313 GFvmIGLVAGTEAGYASMVFYllAYLFMNLGAFACVIlfslRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 1290328277 248 FLPK 251
Cdd:PRK02504 393 FFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-253 |
3.25e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 71.67 E-value: 3.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 21 LEINTLAIIPLIAKHHH-PRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNH----------PIACTLLTTA 89
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkmsenptvvaKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 90 IAMKLGLVPFHFWFPEVLQG--SSLTTAMLLSTVMKFPPIT-ILF-MTSPSLNPT----LLSIMAIASTALGGWMGLNQT 161
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALArVLFsIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 162 QVRKILAFSSISHLGWMAL-----ILTY-NPKLTLLTFYV----------YCLMTITVFLT----LNTTKTLKLSTMMTS 221
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALgDPAMASYGEIAlaggiyhivnHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|..
gi 1290328277 222 WTKTPTLNATLMMTLLSLAGLPPLTGFLPKWL 253
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWL 421
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
26-255 |
1.06e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 64.33 E-value: 1.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 26 LAIIP---LIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQW--DITQL-NHPIACT-------LLTTAIAM 92
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELaAAPLPLTaqlllflAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 93 KLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK--------------FPPITILFMTspslnptLLSIMAIASTALGGWMGL 158
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfalplFPEASAYFAP-------LLAALGVIGIIYGALVAL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 159 NQTQVRKILAFSSISHLGWMAL-ILTYNPK--------------LTLLTFYVyclmtitVFLTLNTTKTLKLSTMMTSWT 223
Cdd:COG1008 295 AQTDLKRLIAYSSVSHMGFVLLgIFALNPLglqgavlqmvshglITAALFLL-------VGVLYDRTHTRDIADLGGLAK 367
|
250 260 270
....*....|....*....|....*....|..
gi 1290328277 224 KTPTLNATLMMTLLSLAGLPPLTGFLPKWLTI 255
Cdd:COG1008 368 RMPVLAALFLLAALASLGLPGTSGFVGEFLVL 399
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-253 |
1.33e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.74 E-value: 1.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 21 LEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQL------NHPI--ACTLLTTAIAM 92
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaeNPTVvtAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 93 KLGLVPFHFWFPEVLQG-SSLTTAMLLSTVMK----------FPPITILFMTSPSLNpTLLSIMAIASTALGGWMGLNQT 161
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKvavyaliriyFTVFGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 162 QVRKILAFSSISHLGWMALILTYNPKLTLL--TFYV--YCLMTITVFLTLN----TTKTLKLSTMMTSWTKTPTLNATLM 233
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260
....*....|....*....|
gi 1290328277 234 MTLLSLAGLPPLTGFLPKWL 253
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWY 393
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
31-256 |
4.54e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.18 E-value: 4.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 31 LIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQ-WDITQL-NHPIACTLLT-------TAIAMKLGLVPFHF 101
Cdd:TIGR01972 145 LIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHT 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 102 WFPEVLQGSSLTTAMLLSTVMK--------------FPPITILFMtspslnpTLLSIMAIASTALGGWMGLNQTQVRKIL 167
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLkmgtygflrfnlplFPDASLYFA-------PVLAALGVIAIIYGALIALAQTDIKRLI 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 168 AFSSISHLGWMAL-ILTYNPKLTLLTFY-------VYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSL 239
Cdd:TIGR01972 298 AYSSISHMGFVLLgIFSFNELGISGAVFqmishglITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMAS 377
|
250
....*....|....*..
gi 1290328277 240 AGLPPLTGFLPKWLTIQ 256
Cdd:TIGR01972 378 LGLPGTSGFVGEFLILL 394
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
68-251 |
2.80e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.24 E-value: 2.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 68 SSGQWDITQL-NHPIACTLLTTAIAM-------KLGLVPFHFWFPEVLQGSSLTTAMLLSTVM---------KFPPItil 130
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 131 FMTSPSLNPTLLsIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNPK------LTLLTfyVYCLMTITVF 204
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALF 336
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1290328277 205 LTL----NTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLPK 251
Cdd:PRK12644 337 LVVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-256 |
1.01e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.24 E-value: 1.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 8 TISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFL------TQAAASTLLLFSSTINAWSSGQ----W-DITQ 76
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGEmailWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 77 LNHPIACTLLTTAIAM-------KLGLVPFHFWFPEV-LQGSSLTTAML--------LSTVMKFPpITILFMTSPSLNPT 140
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSPVSALLsgvllnvaLYAVLRYY-ILIDAAIGSDFPGR 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 141 LLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNPKL----TLLTFYVYCLMTITVFLT----LNTTKT 212
Cdd:PRK06458 283 LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAIFFAsgnvLQKYGT 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1290328277 213 LKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-258 |
1.12e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 52.26 E-value: 1.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 21 LEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNH--PIACTLLTTAIAMKLGLVP 98
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 99 FHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPT--LLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLG 176
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 177 WMALILTYNPKLTLltfyVYCLMTITVFLTLNT----TKTLKLSTMMTSWTKTPtlnatLMMTLLSLAGLPPLTGFLPKW 252
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLCAGAlpsrNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*.
gi 1290328277 253 LTIQEL 258
Cdd:PRK07234 354 LTLKNL 359
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
1-180 |
1.45e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 51.68 E-value: 1.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAA------STLLLFSSTINAWSSGQWDI 74
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 75 TQLNHP----------IACTLLTTAIAMKLGLVPFHFWFPEV-LQGSSLTTAMLLSTVMKFPPITILFMTS-------PS 136
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1290328277 137 LNPTLLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMAL 180
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
22-256 |
1.46e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.87 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 22 EINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFS--------STIN-AWSSGQWDITQLNHPIA--CTLLTTAI 90
Cdd:PRK12663 138 EVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGigllygtfGTLNmAHIAMRLNDMGDTATLTtiALLFLLAF 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 91 AMKLGLVPFhFWFPEVLQGSSLTTAMLLSTVMK-------FPPITILFMTSPSLNPTLLSIMAIASTALGGWMGLNQTQV 163
Cdd:PRK12663 218 GMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 164 RKILAFSSISHLGWMALILTYNPKLTL--LTFYVYCLMTITVFLTLNT------TKTLKLSTMMTSWTKTPTLNATLMMT 235
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGIngAIFYLVHDMVVKTALFLIAgslvrlTGYRSLQYLGGLYRKEPLFGALFLIL 376
|
250 260
....*....|....*....|.
gi 1290328277 236 LLSLAGLPPLTGFLPKWLTIQ 256
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQ 397
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
35-258 |
1.55e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 51.69 E-value: 1.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 35 HHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNH----PIACTLLTTAIAM-------KLGLVPFHFWF 103
Cdd:COG1009 155 YEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaaptILSSPLLTLILLLlllgafgKSAQFPLHFWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 104 PEVLQGSSLTTAMLLSTVMKFPPITILFMTSP--SLNPTLLSIMAI--ASTAL-GGWMGLNQTQVRKILAFSSISHLGWM 178
Cdd:COG1009 235 PDAMEGPTPVSALLHAATMVKAGVYLLARLSPlfALSPVWLTVVAIigAITALfAALIALAQTDIKRVLAYSTVSQLGYM 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 179 ALILTynpkLTLLTFYVYCLMTITVFLTL---------NTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFL 249
Cdd:COG1009 315 FLALG----VGAYVAALFHLLTHAFFKALlflgagsviHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFF 390
|
....*....
gi 1290328277 250 PKWLTIQEL 258
Cdd:COG1009 391 SKEAILEAA 399
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-254 |
1.81e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.84 E-value: 1.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 97 VPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPT-----LLSIMAIASTALGGWMGLNQTQVRKILAFSS 171
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 172 ISHLGWMALILTYNPKLTLLTFYVY----CLMTITVFLTLNT----TKTLKLSTMMTSWTKTPTLNATLMMTLLSLAGLP 243
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170
....*....|.
gi 1290328277 244 PLTGFLPKWLT 254
Cdd:PRK12647 372 PLFGFLAKELI 382
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
22-258 |
1.09e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 49.22 E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 22 EINTLA---IIPLIAKhhhpRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQ-----LNHP------IACTLLT 87
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqglINDTstgfalIVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 88 TAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTV------------------MKFPPITILFMTSPSLNPTLLSIMAIaS 149
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQlsklgaygfllvlyvlpgTKLFSEFGTYRGVPLFNYILAWLGNI-S 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 150 TALGGWMGLNQTQVRKILAFSSISHLGW--MALILTYNPKLTLLTFYV--YCLMTITVFLTLNT----TKTLKLSTMMTS 221
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYilVGLGLGTSLGFAGGLFHVfnHALFKGLFFLIFAAviyrTGTTKISEMGGL 362
|
250 260 270
....*....|....*....|....*....|....*..
gi 1290328277 222 WTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQEL 258
Cdd:PRK08668 363 IEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
17-251 |
3.32e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 3.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 17 AWtglEINTLAIIPLIAKHHhPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQwdiTQLNHPIACTL------LTTAI 90
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVwaekpgLTTVV 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 91 AM--------KLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSL--NPT---LLSIMAIASTALGGWMG 157
Cdd:PRK12650 211 AVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 158 LNQTQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCL----------MTITVflTLNTTKTLKLSTMMTSWTKTPT 227
Cdd:PRK12650 291 VQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLahalfksslfMLIGV--VDHQAGTRDIRRLGSLWRRMPF 368
|
250 260
....*....|....*....|....
gi 1290328277 228 LNATLMMTLLSLAGLPPLTGFLPK 251
Cdd:PRK12650 369 TFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
22-256 |
9.92e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.18 E-value: 9.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 22 EINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNHPIACTLLTTAIAMKL------- 94
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNPTSPVIYGGLlllifgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 95 ----GLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITI------LFMTSPSLNPTLLSIMAIASTA--LGGWMGLNQTQ 162
Cdd:PRK06277 210 lygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSAQGVLIALSVLAmvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 163 VRKILAFSSISHLGWMALILTYNPKLTLLT---------FYVYCLMtITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLM 233
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAgifhainhvIYKSALF-LGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260
....*....|....*....|...
gi 1290328277 234 MTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-252 |
1.30e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.88 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 21 LEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQL---------NHPIACTLL--TTA 89
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptNRAIQIGVLfiMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 90 IAMKLGLVPFHFWFPEVLQGSSLTTAMLLS----TVMKFPPITI--------LFMTSPSLNPTLLsIMAIASTALGGWMG 157
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkanFVFTTLPFNNVFM-ILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 158 LNQTQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVY----CLMTITVFLTLNTTK----TLKLSTMMTSWTKTPTLN 229
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|...
gi 1290328277 230 ATLMMTLLSLAGLPPLTGFLPKW 252
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKW 400
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
31-255 |
1.31e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.96 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 31 LIAKHHHPRAIEAAIKYFLTQAAASTLLLFS----STINAWSSGQWDITQL-NHPIACTLLT-------TAIAMKLGLVP 98
Cdd:PRK05846 150 LIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFP 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 99 FHFWFPEVLQGSSLTTAMLLSTVMK--------------FPPITILFMTspslnptLLSIMAIASTALGGWMGLNQTQVR 164
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLkmgaygllrfslplFPDASHEFAP-------IIITLGVIAIIYGALVALAQTDIK 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 165 KILAFSSISHLGWMAL-ILTYNPK-LTLLTFY------VYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTL 236
Cdd:PRK05846 303 KLIAYSSISHMGFVTLgIFAGNQLgIQGAIFQmishglSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFA 382
|
250
....*....|....*....
gi 1290328277 237 LSLAGLPPLTGFLPKWLTI 255
Cdd:PRK05846 383 MASLGLPGTSGFVGEFLIL 401
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
36-251 |
1.89e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.59 E-value: 1.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 36 HHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQL-----------NHP---IACTLLTTAIAMKLGLVPFHF 101
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselienikGHPlflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 102 WFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPT-----LLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLG 176
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 177 WMALILTYNPK------LTLLTFYVYCLMTITVFLTL------NTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLAGLPP 244
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATFKACLFLvagivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 1290328277 245 LTGFLPK 251
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
43-180 |
4.15e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 44.25 E-value: 4.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 43 AAIKYFLTQAAASTLLLFSSTINAWSSGQ--WDITQL---NHPIACTLLT-----TAIAMKLGLVPFHFWFPEVLQGSSL 112
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 113 TTAMLLSTVM--------------KFPPITILFmtSPslnptLLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWM 178
Cdd:PRK12561 218 PVSMILAGVLlkmggyalirfnvqMLPDAHVYF--AP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
..
gi 1290328277 179 AL 180
Cdd:PRK12561 291 LL 292
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
3-258 |
4.24e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.40 E-value: 4.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 3 LGTTMTISSNHWMM---AWTGLEINTLAIIPLIAKHHHPRAIeaaikyFLTQAAASTLLLFSSTINAWS-SGQWDITQLN 78
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 79 HPIACTLLTTAIAMKLGLVPFHF--WFPEVLQGSSLTTAMLLSTVMK----FPPITILFMTSPS----LNPTLLSIMAIa 148
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIpigyFGLTILAIGAF- 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 149 STALGGWMGLNQTQVRKILAFSSISHLGWM-----ALILTYNPKLTLLTFYVYCLMTIT---------VFLTLNTTKTLK 214
Cdd:PRK06459 236 SILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQS 315
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1290328277 215 LSTMMTSWTKTPTLNATLMMtlLSLAGLPPLTGFLPKWLTIQEL 258
Cdd:PRK06459 316 ITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-251 |
4.98e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.19 E-value: 4.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 85 LLTTAIAMKLGLVPFHFWFPEVL-QGSSLTTAM---LLSTVMKFPPI---TILFmTSPSLNpTLLSIMAIASTALGGWMG 157
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVfagLLTKVGVYAIIrthTLLF-PGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 158 LNQTQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTL--------NTTKTLKLSTMMTSWTKTPTLN 229
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLflvvglieRQAGSSSLRRLGGLAKASPLLA 371
|
170 180
....*....|....*....|..
gi 1290328277 230 ATLMMTLLSLAGLPPLTGFLPK 251
Cdd:PRK12665 372 VLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
1-251 |
5.80e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 43.99 E-value: 5.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHWMMAWTGLEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLNH- 79
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 80 ---------PIACTLLTTAIAMKLGLVPFHFWFPEVLQGSSL-TTAMLLSTVMK---FPPITILFMTSPSLNPT----LL 142
Cdd:PRK08377 197 agtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 143 SIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYNPKL--------TLLTFYVYCLMTITVFLTLNTTKTLK 214
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTE 356
|
250 260 270
....*....|....*....|....*....|....*..
gi 1290328277 215 LSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLPK 251
Cdd:PRK08377 357 IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSK 393
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-256 |
2.80e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 41.86 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 91 AMKLGLVPFHFWFPE----------VLQGSSLTTAMLLSTVMKFppiTILFMTSPSLNPTLLSIMAIASTALGGWMGLNQ 160
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 161 TQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITV----FL----TLNTTKTLKLSTMMTSWTKTPTLNATL 232
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVkaalFLligiMIKITGTTDLKKMGGLIKRYPVLGWMF 376
|
170 180
....*....|....*....|....
gi 1290328277 233 MMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
43-258 |
3.05e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.64 E-value: 3.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 43 AAIKYF-LTQAaaSTLLLFSSTINAW-SSGQWDITQLNHP-----IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTA 115
Cdd:PRK08667 163 AGIFYFvMTQL--STVFLMLGIIVLFiQTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVS 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 116 MLLSTVMKFPPI--TILFMT---SPSLNPTLLSIMAIASTALGGWM-GLNQTQVRKILAFSSISHLG--------WMALI 181
Cdd:PRK08667 241 ALMSGVMLKVAVygLVRFLMdvlSPELWWGVLILLAGSISALLGVIyALKEHDLKGLLAYSSIENIGiilmgiglYVIFG 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 182 LTYNPKLTLLTFYVYCLMTIT-------VFLT----LNTTKTLKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLP 250
Cdd:PRK08667 321 VYGLDTLALLALGGALFHSLNhalfkslLFLTagsvVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFAS 400
|
....*...
gi 1290328277 251 KWLTIQEL 258
Cdd:PRK08667 401 ELLLYESF 408
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
80-256 |
3.24e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.87 E-value: 3.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 80 PIACTLLTTAI--AMKLGLvpfHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPTLLSIMAI----ASTAL- 152
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgALTAFf 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 153 GGWMGLNQTQVRKILAFSSISHLGWMALILTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTM-------MTSWTKT 225
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeqdmrkMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|..
gi 1290328277 226 PTLNATLMMT-LLSLAGLPPLTGFLPKWLTIQ 256
Cdd:MTH00032 383 IPFTYTMMLIgSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
21-255 |
3.76e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 41.50 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 21 LEINTLAIIPLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDITQLN------HPIACTLLTTAIAMKL 94
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSglhgslKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 95 GLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNP------TLLSIMAIASTALGGWMGLNQTQVRKILA 168
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 169 FSSISHLGWMALILTYNPKLTLLTF-----------YVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNATLMMTLL 237
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAILGSRLALegsiayifnhaFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*...
gi 1290328277 238 SLAGLPPLTGFLPKWLTI 255
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
26-191 |
4.75e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 41.22 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 26 LAIIPL---IAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSG--QWDITQLNH---PIACTLLTTA-----IAM 92
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRShtlPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 93 KLGLVPFHFWFPEVLQGSSLTTAMLLSTVM-KFPPITIL------FMTSPSLNPTLLSIMAIASTALGGWMGLNQTQVRK 165
Cdd:PRK06473 218 KIPLVPFHTWLPDAHVEASTPVSVLLAGVLlKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180
....*....|....*....|....*.
gi 1290328277 166 ILAFSSISHLGWMALILTYNPKLTLL 191
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSIL 323
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
98-251 |
5.34e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.89 E-value: 5.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 98 PFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSPSLNPT-----LLSIMAIASTALGGWMGLNQTQVRKILAFSSI 172
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 173 SHLGW-MALI-----LTYNPKLTLLTFYVY----------------CLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLNA 230
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYVFvlfaalfhlmnhaifkCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
170 180
....*....|....*....|.
gi 1290328277 231 TLMMTLLSLAGLPPLTGFLPK 251
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSK 408
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
81-256 |
5.35e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.85 E-value: 5.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 81 IACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVM-KFPPITI------LFMTSPSLNPTLLSIMAIASTALG 153
Cdd:PRK07363 206 ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 154 GWMGLNQTQVRKILAFSSISHLGWMALILTYNPKLTLLTfYVYCLMTITVFLTL------------NTTKTLKLSTMMTS 221
Cdd:PRK07363 286 ALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLG-AVAQMISHGLILALlfhlvgiverkvGTRDLDVLNGLMNP 364
|
170 180 190
....*....|....*....|....*....|....*
gi 1290328277 222 WTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:PRK07363 365 IRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
89-255 |
5.65e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.68 E-value: 5.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 89 AIAMKLGLVPFHFWFPEV-----LQGSSLTTAMLLS------TVMKFPpitILFMTSPSLNPTLLSiMAIASTALGGWMG 157
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKlggyglVRLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 158 LNQTQVRKILAFSSISHLGWMALI--------LTYNPKLTLLTFYVYCLMTITVFLTLNTTKTLKLSTMMTSWTKTPTLN 229
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITlvthdiigLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWG 394
|
170 180
....*....|....*....|....*.
gi 1290328277 230 ATLMMTLLSLAGLPPLTGFLPKWLTI 255
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
95-256 |
7.10e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.58 E-value: 7.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 95 GLVPFHFWFPEVLQGSSLTTAMLLSTV-MKFPPITILFMTSPSLNPTL-----LSIMAIASTALGGWMGLNQTQVRKILA 168
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 169 FSSISHLGWMAL--------ILTYNPKLTLLTF-------YVYCLMTITVFLTLNT----TKTLKLSTMMTSWTKTPTLN 229
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLvgglyhlLNHSLFKSVLFLGAGSvwfrTGHRDIEKLGGIGKKMPVIS 354
|
170 180
....*....|....*....|....*..
gi 1290328277 230 ATLMMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
68-256 |
7.82e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.52 E-value: 7.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 68 SSGQWDITQLNHPIACTLLTTAI---AM-KLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITIL-----FMTSPSLN 138
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWF 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 139 PTLLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMALILTYN-PKLTLLTFYVYCLMTITVFLTLNTT-----KT 212
Cdd:MTH00207 243 NPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHS 322
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1290328277 213 LKLSTMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 256
Cdd:MTH00207 323 QDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-180 |
1.86e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.30 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 1 LLLGTTMTISSNHW---MMAW--TGLEINTLaiipLIAKHHHPRAIEAAIKYFLTQAAASTLLLFSSTINAWSSGQWDIT 75
Cdd:PRK08168 109 VLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 76 QLNHPI-----------ACTLLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTV--------MKFPPitiLFMTSPS 136
Cdd:PRK08168 185 ALWAHLaaqgaspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP---LLEQAPP 261
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1290328277 137 LNpTLLSIMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMAL 180
Cdd:PRK08168 262 AR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
92-258 |
5.12e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 37.54 E-value: 5.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 92 MKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFMTSpSLNPTLLSIMAIASTALGGWMGLNqtqVRKILAFSS 171
Cdd:MTH00091 69 MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFF-SKNFFFLLLFGLLICFFQMFLLKS---YKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1290328277 172 ISHLGWMALILTYN-PKLTLLTFYVYCLMTItvfltlnttktlklstMMTSWTKTPTLNATLMMTLLSLAGLPPLTGFLP 250
Cdd:MTH00091 145 TESFNWLILSFFFSfFNVFFLFFYYFLLMLF----------------LIPKFNNVNKLNFVSWETLLVFMNLPFSVTFFV 208
|
....*...
gi 1290328277 251 KWLTIQEL 258
Cdd:MTH00091 209 KIFSLSEI 216
|
|
| |
