|
Name |
Accession |
Description |
Interval |
E-value |
| dnaA |
PRK00149 |
chromosomal replication initiator protein DnaA; |
52-513 |
0e+00 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 234667 [Multi-domain] Cd Length: 401 Bit Score: 587.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 52 LAEQWQRVRGRLQQEVGEAVFRSWLREMVLGGLDGDEITLKLPSRFLCDYARSHFGERLTALWQaesaairrvdlrvgta 131
Cdd:PRK00149 2 LQSLWEKVLERLKDELSEQEYETWIKPLKALSLEDNTLTLYVPNRFVKDWIEKNYLDLIEEALQ---------------- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 132 athaapidhaaparglaettaafpavpqarseergearldmatLDGRFAFDSFVVGKPNEFAYACARRVAESPASVgFNP 211
Cdd:PRK00149 66 -------------------------------------------LNPKYTFDNFVVGKSNRLAHAAALAVAENPGKA-YNP 101
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 212 LFLYGGVGLGKTHLMHAIAWELLNRaaQPAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDN 291
Cdd:PRK00149 102 LFIYGGVGLGKTHLLHAIGNYILEK--NPNAKVVYVTSEKFTNDFVNALRNNTMEEFKEKYRSVDVLLIDDIQFLAGKER 179
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 292 TQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGCGMVADLHATTFELRISILEAKALRAGVPVPTKVMEFL 371
Cdd:PRK00149 180 TQEEFFHTFNALHEAGKQIVLTSDRPPKELPGLEERLRSRFEWGLTVDIEPPDLETRIAILKKKAEEEGIDLPDEVLEFI 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 372 ALKITSNVRELEGALNRLIAHANLFGRPLTMETTQEVLHDILKAHDRRVTIEEIQRKVSEHWNIRLTDMSSARRARAVAR 451
Cdd:PRK00149 260 AKNITSNVRELEGALNRLIAYASLTGKPITLELAKEALKDLLAAQKKKITIENIQKVVAEYYNIKVSDLKSKSRTRNIAR 339
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1285905147 452 PRQVAMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVARVGELMERDASFAEDVELLRRMLES 513
Cdd:PRK00149 340 PRQIAMYLAKELTDLSLPEIGRAFGGRDHTTVLHAVRKIEKLLEEDPELKEDVEELKRKLKS 401
|
|
| DnaA |
TIGR00362 |
chromosomal replication initiator protein DnaA; DnaA is involved in DNA biosynthesis; ... |
56-511 |
0e+00 |
|
chromosomal replication initiator protein DnaA; DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273037 [Multi-domain] Cd Length: 437 Bit Score: 582.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 56 WQRVRGRLQQEVGEAVFRSWLREMVLGGLDGDEITLKLPSRFLCDYARSHFGERLTALWQAESAAIRRVDLRVGTAATHA 135
Cdd:TIGR00362 1 WNRILERLEKELSEQEYNTWFKPLKLLSIEGNTLIISVPNEFVKEWIEKNYLDLIEELLQELFGAEIEIEFTVGEDEEEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 136 APIDHAAPArglAETTAAFPAVPQARseergearldmatLDGRFAFDSFVVGKPNEFAYACARRVAESPASVgFNPLFLY 215
Cdd:TIGR00362 81 EPNSKKPEP---APPEAPAPPSSASG-------------LNPKYTFDNFVVGKSNRLAHAAALAVAENPGKA-YNPLFIY 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 216 GGVGLGKTHLMHAIAWELLNRaaQPAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEE 295
Cdd:TIGR00362 144 GGVGLGKTHLLHAIGNEILEN--NPNAKVLYVSSEKFTNDFVNALRNNKMEEFKEKYRSVDLLLIDDIQFLAGKERTQEE 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 296 FFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGCGMVADLHATTFELRISILEAKALRAGVPVPTKVMEFLALKI 375
Cdd:TIGR00362 222 FFHTFNALHENNKQIVLTSDRPPKELPGLEDRLRSRFEWGLVVDIEPPDLETRLAILQKKAEEEGLELPDEVLEFIAKNI 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 376 TSNVRELEGALNRLIAHANLFGRPLTMETTQEVLHDILKAHDRRVTIEEIQRKVSEHWNIRLTDMSSARRARAVARPRQV 455
Cdd:TIGR00362 302 TSNVRELEGALNRLLAYASLTGKPITLELAKEALKDLLRAQKKEITIENIQKVVAKYYNIKVSDLKSKKRTRNIVRPRQI 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1285905147 456 AMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVARVGELMERDASFAEDVELLRRML 511
Cdd:TIGR00362 382 AMYLAKELTDLSLPEIGKAFGGRDHTTVLHAVRKIEKLIETDAELKEDIEELKRKL 437
|
|
| DnaA |
COG0593 |
Chromosomal replication initiation ATPase DnaA [Replication, recombination and repair]; |
175-480 |
3.51e-156 |
|
Chromosomal replication initiation ATPase DnaA [Replication, recombination and repair];
Pssm-ID: 440358 [Multi-domain] Cd Length: 303 Bit Score: 446.56 E-value: 3.51e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 175 LDGRFAFDSFVVGKPNEFAYACARRVAESPAsVGFNPLFLYGGVGLGKTHLMHAIAWELLNRaaQPAVSVAYMSAEKFMY 254
Cdd:COG0593 1 LNPRYTFDNFVVGPSNRLAHAAALAVAEWPG-KAYNPLFLYGGVGLGKTHLLHAIGNEALEN--NPGARVVYLTAEEFTN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 255 RFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGC 334
Cdd:COG0593 78 DFINAIRNNTIEEFKEKYRSVDVLLIDDIQFLAGKEATQEEFFHTFNALREAGKQIVLTSDRPPKELPGLEERLRSRLEW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 335 GMVADLHATTFELRISILEAKALRAGVPVPTKVMEFLALKITSNVRELEGALNRLIAHANLFGRPLTMETTQEVLHDILK 414
Cdd:COG0593 158 GLVVDIQPPDLETRIAILRKKAADRGLELPDEVLEYLARRIERNVRELEGALNRLDAYALLTGRPITLELAREVLKDLLR 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1285905147 415 AHDRRVTIEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLAKQLTSRSLPEIGRKFGNRDH 480
Cdd:COG0593 238 AQKKEITIEDIQKAVAEYFGVSVADLLSKSRTREIARPRQIAMYLARELTDLSLPEIGRAFGGRDH 303
|
|
| Bac_DnaA |
pfam00308 |
Bacterial dnaA protein; |
175-395 |
3.12e-99 |
|
Bacterial dnaA protein;
Pssm-ID: 278724 [Multi-domain] Cd Length: 219 Bit Score: 298.09 E-value: 3.12e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 175 LDGRFAFDSFVVGKPNEFAYACARRVAESPASVgFNPLFLYGGVGLGKTHLMHAIAWELLNRAaqPAVSVAYMSAEKFMY 254
Cdd:pfam00308 1 LNPRYTFENFVIGPSNRFAHAAALTVAKAPGKA-YNPLFIYGGVGLGKTHLLHAIGNYALQNA--PNLRVVYLTAEEFLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 255 RFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGC 334
Cdd:pfam00308 78 DFVDAIRDNKTNQFKEKYRNVDVLLIDDIQFLAGKEGTQEEFFHTFNALHESGKQIVFSSDRPPKELEELEDRLRSRFQW 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1285905147 335 GMVADLHATTFELRISILEAKALRAGVPVPTKVMEFLALKITSNVRELEGALNRLIAHANL 395
Cdd:pfam00308 158 GLVTDIEPPDLETRLAILRKKAEAEGIEIPPEVLNFIAQRVTDNVRELEGALNRLLAYSSL 218
|
|
| Bac_DnaA_C |
cd06571 |
C-terminal domain of bacterial DnaA proteins. The DNA-binding C-terminal domain of DnaA ... |
422-511 |
3.63e-29 |
|
C-terminal domain of bacterial DnaA proteins. The DNA-binding C-terminal domain of DnaA contains a helix-turn-helix motif that specifically interacts with the DnaA box, a 9-mer motif that occurs repetitively in the replication origin oriC. Multiple copies of DnaA, which is an ATPase, bind to 9-mers at the origin and form an initial complex in which the DNA strands are being separated in an ATP-dependent step.
Pssm-ID: 119330 [Multi-domain] Cd Length: 90 Bit Score: 110.30 E-value: 3.63e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 422 IEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVARVGELMERDASFA 501
Cdd:cd06571 1 IELIIEAVAEYFGISVEDLRSKSRKKEIALARQIAMYLARELTGLSLPEIGRAFGGRDHSTVLHAVRKIEELLEEDPELK 80
|
90
....*....|
gi 1285905147 502 EDVELLRRML 511
Cdd:cd06571 81 EDVEELEKKL 90
|
|
| Bac_DnaA_C |
smart00760 |
Bacterial dnaA protein helix-turn-helix domain; Could be involved in DNA-binding. |
421-489 |
8.56e-23 |
|
Bacterial dnaA protein helix-turn-helix domain; Could be involved in DNA-binding.
Pssm-ID: 197863 [Multi-domain] Cd Length: 69 Bit Score: 91.80 E-value: 8.56e-23
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1285905147 421 TIEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVAR 489
Cdd:smart00760 1 TIEEIIEAVAEYFGVKPEDLKSKSRKREIVLARQIAMYLARELTDLSLPEIGKIFGGRDHSTVLHACRK 69
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| dnaA |
PRK00149 |
chromosomal replication initiator protein DnaA; |
52-513 |
0e+00 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 234667 [Multi-domain] Cd Length: 401 Bit Score: 587.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 52 LAEQWQRVRGRLQQEVGEAVFRSWLREMVLGGLDGDEITLKLPSRFLCDYARSHFGERLTALWQaesaairrvdlrvgta 131
Cdd:PRK00149 2 LQSLWEKVLERLKDELSEQEYETWIKPLKALSLEDNTLTLYVPNRFVKDWIEKNYLDLIEEALQ---------------- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 132 athaapidhaaparglaettaafpavpqarseergearldmatLDGRFAFDSFVVGKPNEFAYACARRVAESPASVgFNP 211
Cdd:PRK00149 66 -------------------------------------------LNPKYTFDNFVVGKSNRLAHAAALAVAENPGKA-YNP 101
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 212 LFLYGGVGLGKTHLMHAIAWELLNRaaQPAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDN 291
Cdd:PRK00149 102 LFIYGGVGLGKTHLLHAIGNYILEK--NPNAKVVYVTSEKFTNDFVNALRNNTMEEFKEKYRSVDVLLIDDIQFLAGKER 179
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 292 TQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGCGMVADLHATTFELRISILEAKALRAGVPVPTKVMEFL 371
Cdd:PRK00149 180 TQEEFFHTFNALHEAGKQIVLTSDRPPKELPGLEERLRSRFEWGLTVDIEPPDLETRIAILKKKAEEEGIDLPDEVLEFI 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 372 ALKITSNVRELEGALNRLIAHANLFGRPLTMETTQEVLHDILKAHDRRVTIEEIQRKVSEHWNIRLTDMSSARRARAVAR 451
Cdd:PRK00149 260 AKNITSNVRELEGALNRLIAYASLTGKPITLELAKEALKDLLAAQKKKITIENIQKVVAEYYNIKVSDLKSKSRTRNIAR 339
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1285905147 452 PRQVAMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVARVGELMERDASFAEDVELLRRMLES 513
Cdd:PRK00149 340 PRQIAMYLAKELTDLSLPEIGRAFGGRDHTTVLHAVRKIEKLLEEDPELKEDVEELKRKLKS 401
|
|
| DnaA |
TIGR00362 |
chromosomal replication initiator protein DnaA; DnaA is involved in DNA biosynthesis; ... |
56-511 |
0e+00 |
|
chromosomal replication initiator protein DnaA; DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273037 [Multi-domain] Cd Length: 437 Bit Score: 582.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 56 WQRVRGRLQQEVGEAVFRSWLREMVLGGLDGDEITLKLPSRFLCDYARSHFGERLTALWQAESAAIRRVDLRVGTAATHA 135
Cdd:TIGR00362 1 WNRILERLEKELSEQEYNTWFKPLKLLSIEGNTLIISVPNEFVKEWIEKNYLDLIEELLQELFGAEIEIEFTVGEDEEEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 136 APIDHAAPArglAETTAAFPAVPQARseergearldmatLDGRFAFDSFVVGKPNEFAYACARRVAESPASVgFNPLFLY 215
Cdd:TIGR00362 81 EPNSKKPEP---APPEAPAPPSSASG-------------LNPKYTFDNFVVGKSNRLAHAAALAVAENPGKA-YNPLFIY 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 216 GGVGLGKTHLMHAIAWELLNRaaQPAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEE 295
Cdd:TIGR00362 144 GGVGLGKTHLLHAIGNEILEN--NPNAKVLYVSSEKFTNDFVNALRNNKMEEFKEKYRSVDLLLIDDIQFLAGKERTQEE 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 296 FFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGCGMVADLHATTFELRISILEAKALRAGVPVPTKVMEFLALKI 375
Cdd:TIGR00362 222 FFHTFNALHENNKQIVLTSDRPPKELPGLEDRLRSRFEWGLVVDIEPPDLETRLAILQKKAEEEGLELPDEVLEFIAKNI 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 376 TSNVRELEGALNRLIAHANLFGRPLTMETTQEVLHDILKAHDRRVTIEEIQRKVSEHWNIRLTDMSSARRARAVARPRQV 455
Cdd:TIGR00362 302 TSNVRELEGALNRLLAYASLTGKPITLELAKEALKDLLRAQKKEITIENIQKVVAKYYNIKVSDLKSKKRTRNIVRPRQI 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1285905147 456 AMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVARVGELMERDASFAEDVELLRRML 511
Cdd:TIGR00362 382 AMYLAKELTDLSLPEIGKAFGGRDHTTVLHAVRKIEKLIETDAELKEDIEELKRKL 437
|
|
| DnaA |
COG0593 |
Chromosomal replication initiation ATPase DnaA [Replication, recombination and repair]; |
175-480 |
3.51e-156 |
|
Chromosomal replication initiation ATPase DnaA [Replication, recombination and repair];
Pssm-ID: 440358 [Multi-domain] Cd Length: 303 Bit Score: 446.56 E-value: 3.51e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 175 LDGRFAFDSFVVGKPNEFAYACARRVAESPAsVGFNPLFLYGGVGLGKTHLMHAIAWELLNRaaQPAVSVAYMSAEKFMY 254
Cdd:COG0593 1 LNPRYTFDNFVVGPSNRLAHAAALAVAEWPG-KAYNPLFLYGGVGLGKTHLLHAIGNEALEN--NPGARVVYLTAEEFTN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 255 RFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGC 334
Cdd:COG0593 78 DFINAIRNNTIEEFKEKYRSVDVLLIDDIQFLAGKEATQEEFFHTFNALREAGKQIVLTSDRPPKELPGLEERLRSRLEW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 335 GMVADLHATTFELRISILEAKALRAGVPVPTKVMEFLALKITSNVRELEGALNRLIAHANLFGRPLTMETTQEVLHDILK 414
Cdd:COG0593 158 GLVVDIQPPDLETRIAILRKKAADRGLELPDEVLEYLARRIERNVRELEGALNRLDAYALLTGRPITLELAREVLKDLLR 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1285905147 415 AHDRRVTIEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLAKQLTSRSLPEIGRKFGNRDH 480
Cdd:COG0593 238 AQKKEITIEDIQKAVAEYFGVSVADLLSKSRTREIARPRQIAMYLARELTDLSLPEIGRAFGGRDH 303
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
131-510 |
8.51e-100 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 313.30 E-value: 8.51e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 131 AATHAAPIDHAAPARGLAETTAAFPAVPQARSEERGEARLDMATLDGRFAFDSFVVGKPNEFAYACARRVAESPASvGFN 210
Cdd:PRK14086 237 HVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKYTFDTFVIGASNRFAHAAAVAVAEAPAK-AYN 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 211 PLFLYGGVGLGKTHLMHAIAWelLNRAAQPAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKD 290
Cdd:PRK14086 316 PLFIYGESGLGKTHLLHAIGH--YARRLYPGTRVRYVSSEEFTNEFINSIRDGKGDSFRRRYREMDILLVDDIQFLEDKE 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 291 NTQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGCGMVADLHATTFELRISILEAKALRAGVPVPTKVMEF 370
Cdd:PRK14086 394 STQEEFFHTFNTLHNANKQIVLSSDRPPKQLVTLEDRLRNRFEWGLITDVQPPELETRIAILRKKAVQEQLNAPPEVLEF 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 371 LALKITSNVRELEGALNRLIAHANLFGRPLTMETTQEVLHDILKAHDR-RVTIEEIQRKVSEHWNIRLTDMSSARRARAV 449
Cdd:PRK14086 474 IASRISRNIRELEGALIRVTAFASLNRQPVDLGLTEIVLRDLIPEDSApEITAAAIMAATADYFGLTVEDLCGTSRSRVL 553
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1285905147 450 ARPRQVAMYLAKQLTSRSLPEIGRKFGnRDHTTVMHAVARVGELM-ERDASFAEDVELLRRM 510
Cdd:PRK14086 554 VTARQIAMYLCRELTDLSLPKIGQQFG-RDHTTVMHADRKIRALMaERRSIYNQVTELTNRI 614
|
|
| Bac_DnaA |
pfam00308 |
Bacterial dnaA protein; |
175-395 |
3.12e-99 |
|
Bacterial dnaA protein;
Pssm-ID: 278724 [Multi-domain] Cd Length: 219 Bit Score: 298.09 E-value: 3.12e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 175 LDGRFAFDSFVVGKPNEFAYACARRVAESPASVgFNPLFLYGGVGLGKTHLMHAIAWELLNRAaqPAVSVAYMSAEKFMY 254
Cdd:pfam00308 1 LNPRYTFENFVIGPSNRFAHAAALTVAKAPGKA-YNPLFIYGGVGLGKTHLLHAIGNYALQNA--PNLRVVYLTAEEFLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 255 RFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGC 334
Cdd:pfam00308 78 DFVDAIRDNKTNQFKEKYRNVDVLLIDDIQFLAGKEGTQEEFFHTFNALHESGKQIVFSSDRPPKELEELEDRLRSRFQW 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1285905147 335 GMVADLHATTFELRISILEAKALRAGVPVPTKVMEFLALKITSNVRELEGALNRLIAHANL 395
Cdd:pfam00308 158 GLVTDIEPPDLETRLAILRKKAEAEGIEIPPEVLNFIAQRVTDNVRELEGALNRLLAYSSL 218
|
|
| PRK12422 |
PRK12422 |
chromosomal replication initiator protein DnaA; |
148-497 |
1.21e-62 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 183521 [Multi-domain] Cd Length: 445 Bit Score: 211.23 E-value: 1.21e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 148 AETTAAFPAVPQARSEERGEARLDMATLDGRFAFDSFVVGKPNEFAYACARRVAESP---ASVGFNPLFLYGGVGLGKTH 224
Cdd:PRK12422 77 LDKSTPFKKEKQIQQEKTAYFTMKYGELDPLMTFANFLVTPENDLPHRILQEFTKVSeqgKGFPFNPIYLFGPEGSGKTH 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 225 LMHAIAWELlnRAAqpAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEEFFHTFNALV 304
Cdd:PRK12422 157 LMQAAVHAL--RES--GGKILYVRSELFTEHLVSAIRSGEMQRFRQFYRNVDALFIEDIEVFSGKGATQEEFFHTFNSLH 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 305 DAGKQIVVSADKSPSDLSGLEDRLRTRLGCGMVADLHATTFELRISILEAKALRAGVPVPTKVMEFLALKITSNVRELEG 384
Cdd:PRK12422 233 TEGKLIVISSTCAPQDLKAMEERLISRFEWGIAIPLHPLTKEGLRSFLERKAEALSIRIEETALDFLIEALSSNVKSLLH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 385 ALNRL---IAHANLFGRPLTMETTQEVLHDILKAHDR-RVTIEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLA 460
Cdd:PRK12422 313 ALTLLakrVAYKKLSHQLLYVDDIKALLHDVLEAAESvRLTPSKIIRAVAQYYGVSPESILGRSQSREYVLPRQVAMYLC 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 1285905147 461 KQLTSRSLPEIGRKFGnRDHTTVMHAVARVGELMERD 497
Cdd:PRK12422 393 RQKLSLSYVKIGDVFS-RDHSTVISSIRAISQKLEED 428
|
|
| Bac_DnaA_C |
cd06571 |
C-terminal domain of bacterial DnaA proteins. The DNA-binding C-terminal domain of DnaA ... |
422-511 |
3.63e-29 |
|
C-terminal domain of bacterial DnaA proteins. The DNA-binding C-terminal domain of DnaA contains a helix-turn-helix motif that specifically interacts with the DnaA box, a 9-mer motif that occurs repetitively in the replication origin oriC. Multiple copies of DnaA, which is an ATPase, bind to 9-mers at the origin and form an initial complex in which the DNA strands are being separated in an ATP-dependent step.
Pssm-ID: 119330 [Multi-domain] Cd Length: 90 Bit Score: 110.30 E-value: 3.63e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 422 IEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVARVGELMERDASFA 501
Cdd:cd06571 1 IELIIEAVAEYFGISVEDLRSKSRKKEIALARQIAMYLARELTGLSLPEIGRAFGGRDHSTVLHAVRKIEELLEEDPELK 80
|
90
....*....|
gi 1285905147 502 EDVELLRRML 511
Cdd:cd06571 81 EDVEELEKKL 90
|
|
| DnaA_homol_Hda |
TIGR03420 |
DnaA regulatory inactivator Hda; Members of this protein family are Hda (Homologous to DnaA). ... |
181-410 |
3.32e-28 |
|
DnaA regulatory inactivator Hda; Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 274571 [Multi-domain] Cd Length: 226 Bit Score: 111.90 E-value: 3.32e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 181 FDSFVVGkPNEFAYACARRVAESPASvgfNPLFLYGGVGLGKTHLMHAIAwellNRAAQPAVSVAYMSaekfmyrfiAAI 260
Cdd:TIGR03420 14 FDNFYAG-GNAELLAALRQLAAGKGD---RFLYLWGESGSGKSHLLQAAC----AAAEERGKSAIYLP---------LAE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 261 RSQSTMEFKEQLRGVDVLMVDDLQFLIGKDNTQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLEDRLRTRLGCGMVADL 340
Cdd:TIGR03420 77 LAQADPEVLEGLEQADLVCLDDVEAIAGQPEWQEALFHLYNRVREAGGRLLIAGRAAPAQLPLRLPDLRTRLAWGLVFQL 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 341 HATTFELRISILEAKALRAGVPVPTKVMEFLALKITSNVRELEGALNRLIAHANLFGRPLTMETTQEVLH 410
Cdd:TIGR03420 157 PPLSDEEKIAALQSRAARRGLQLPDEVADYLLRHGSRDMGSLMALLDALDRASLAAKRKITIPFVKEVLA 226
|
|
| Bac_DnaA_C |
pfam08299 |
Bacterial dnaA protein helix-turn-helix; |
422-490 |
8.04e-24 |
|
Bacterial dnaA protein helix-turn-helix;
Pssm-ID: 462419 [Multi-domain] Cd Length: 69 Bit Score: 94.39 E-value: 8.04e-24
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1285905147 422 IEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVARV 490
Cdd:pfam08299 1 IEKIIEAVAEYFGISPEDLKSKSRKREIALARQIAMYLARELTDLSLPEIGRAFGGRDHSTVIHACKKI 69
|
|
| Bac_DnaA_C |
smart00760 |
Bacterial dnaA protein helix-turn-helix domain; Could be involved in DNA-binding. |
421-489 |
8.56e-23 |
|
Bacterial dnaA protein helix-turn-helix domain; Could be involved in DNA-binding.
Pssm-ID: 197863 [Multi-domain] Cd Length: 69 Bit Score: 91.80 E-value: 8.56e-23
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1285905147 421 TIEEIQRKVSEHWNIRLTDMSSARRARAVARPRQVAMYLAKQLTSRSLPEIGRKFGNRDHTTVMHAVAR 489
Cdd:smart00760 1 TIEEIIEAVAEYFGVKPEDLKSKSRKREIVLARQIAMYLARELTDLSLPEIGKIFGGRDHSTVLHACRK 69
|
|
| DnaA_N |
pfam11638 |
DnaA N-terminal domain; This family of proteins represents the N-terminal domain of DnaA, a ... |
53-116 |
4.00e-18 |
|
DnaA N-terminal domain; This family of proteins represents the N-terminal domain of DnaA, a protein involved in the initiation of bacterial chromosomal replication. The structure of this domain is known. It is also found in three copies in some proteins. The exact function of this domain is uncertain but it has been suggested to play a role in oligomerization.
Pssm-ID: 463316 [Multi-domain] Cd Length: 65 Bit Score: 78.48 E-value: 4.00e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1285905147 53 AEQWQRVRGRLQQEVGEAVFRSWLREMVLGGL-DGDEITLKLPSRFLCDYARSHFGERLTALWQA 116
Cdd:pfam11638 1 EELWERVLERLRKEVGEQTFNTWIKPLTLVDLdDGGSLTLSVPNRFVRDWVEEHYLDRILELWQE 65
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
190-335 |
9.54e-14 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 68.71 E-value: 9.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 190 NEFAYACARRVAESPAsvgFNPLFLYGGVGLGKTHLMHAIAWELLNraaqPAVSVAYMSAEKFMYRFIAAIRSQST---- 265
Cdd:cd00009 3 QEEAIEALREALELPP---PKNLLLYGPPGTGKTTLARAIANELFR----PGAPFLYLNASDLLEGLVVAELFGHFlvrl 75
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1285905147 266 MEFKEQLRGVDVLMVDDLQFL-IGKDNTQEEFFHTFNALVDAG---KQIVVSADKSPSDLS-GLEDRLRTRLGCG 335
Cdd:cd00009 76 LFELAEKAKPGVLFIDEIDSLsRGAQNALLRVLETLNDLRIDRenvRVIGATNRPLLGDLDrALYDRLDIRIVIP 150
|
|
| PRK08903 |
PRK08903 |
DnaA regulatory inactivator Hda; Validated |
180-371 |
3.57e-13 |
|
DnaA regulatory inactivator Hda; Validated
Pssm-ID: 236347 [Multi-domain] Cd Length: 227 Bit Score: 68.85 E-value: 3.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 180 AFDSFVVGkPNEFAYACARRVAESPASVGFnpLFLYGGVGLGKTHLMHAIAwellNRAAQPAVSVAYMSAekfmyrfiaa 259
Cdd:PRK08903 16 TFDNFVAG-ENAELVARLRELAAGPVADRF--FYLWGEAGSGRSHLLQALV----ADASYGGRNARYLDA---------- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 260 irsQSTMEFKEQLRGVDVLMVDDLQFLigKDNTQEEFFHTFNALVDAGK-QIVVSADKSPSDLSGLEDrLRTRLGCGMVA 338
Cdd:PRK08903 79 ---ASPLLAFDFDPEAELYAVDDVERL--DDAQQIALFNLFNRVRAHGQgALLVAGPAAPLALPLRED-LRTRLGWGLVY 152
|
170 180 190
....*....|....*....|....*....|...
gi 1285905147 339 DLHATTFELRISILEAKALRAGVPVPTKVMEFL 371
Cdd:PRK08903 153 ELKPLSDADKIAALKAAAAERGLQLADEVPDYL 185
|
|
| PRK06835 |
PRK06835 |
DNA replication protein DnaC; Validated |
212-332 |
3.16e-12 |
|
DNA replication protein DnaC; Validated
Pssm-ID: 235871 [Multi-domain] Cd Length: 329 Bit Score: 67.62 E-value: 3.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 212 LFLYGGVGLGKTHLMHAIAWELLNRAAqpavSVAYMSAEKFM-----YRFiaaiRSQSTMEFKEQ-LRGVDVLMVDDLqf 285
Cdd:PRK06835 186 LLFYGNTGTGKTFLSNCIAKELLDRGK----SVIYRTADELIeilreIRF----NNDKELEEVYDlLINCDLLIIDDL-- 255
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1285905147 286 liGKDNTQE----EFFHTFNALVDAGKQIVVSADKSPSDLSGL-EDRLRTRL 332
Cdd:PRK06835 256 --GTEKITEfsksELFNLINKRLLRQKKMIISTNLSLEELLKTySERISSRL 305
|
|
| PRK08084 |
PRK08084 |
DnaA inactivator Hda; |
212-410 |
9.00e-11 |
|
DnaA inactivator Hda;
Pssm-ID: 181224 [Multi-domain] Cd Length: 235 Bit Score: 62.00 E-value: 9.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 212 LFLYGGVGLGKTHLMHAiAWELLNRAAQpavSVAYMSAEKFMYrFIAAIrsqstMEFKEQLrgvDVLMVDDLQFLIGKDN 291
Cdd:PRK08084 48 IYLWSREGAGRSHLLHA-ACAELSQRGR---AVGYVPLDKRAW-FVPEV-----LEGMEQL---SLVCIDNIECIAGDEL 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 292 TQEEFFHTFNALVDAGK-QIVVSADKSPSDLS-GLEDrLRTRLGCGMVADLHATTFELRISILEAKALRAGVPVPTKVME 369
Cdd:PRK08084 115 WEMAIFDLYNRILESGRtRLLITGDRPPRQLNlGLPD-LASRLDWGQIYKLQPLSDEEKLQALQLRARLRGFELPEDVGR 193
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1285905147 370 FLALKITSNVRELEGALNRLiAHANLFG-RPLTMETTQEVLH 410
Cdd:PRK08084 194 FLLKRLDREMRTLFMTLDQL-DRASITAqRKLTIPFVKEILK 234
|
|
| DnaC |
COG1484 |
DNA replication protein DnaC [Replication, recombination and repair]; |
159-283 |
1.91e-09 |
|
DNA replication protein DnaC [Replication, recombination and repair];
Pssm-ID: 441093 [Multi-domain] Cd Length: 242 Bit Score: 58.25 E-value: 1.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 159 QARSEERGEARLDMATLDGRFAFDSFVVgkpnEFAYACARRVAESPASVGF----NPLFLYGGVGLGKTHLMHAIAwell 234
Cdd:COG1484 49 AEREQRRIERRLKAARFPAAKTLEDFDF----DAQPGLDRRQILELATLDFiergENLILLGPPGTGKTHLAIALG---- 120
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1285905147 235 NRAAQPAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGVDVLMVDDL 283
Cdd:COG1484 121 HEACRAGYRVRFTTAPDLVNELKEARADGRLERLLKRLAKVDLLILDEL 169
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
210-332 |
1.15e-06 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 48.14 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 210 NPLFLYGGVGLGKTHLMHAIAWELlnraAQPAVSVAYMSAEKFMYRFIAAIRSQSTMEFKEQLRGV-------------- 275
Cdd:smart00382 3 EVILIVGPPGSGKTTLARALAREL----GPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGElrlrlalalarklk 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1285905147 276 -DVLMVDDLQFLIGKDNTQEEFFHTFNALVDAGKQ------IVVSADKSPSDLSGLEDRLRTRL 332
Cdd:smart00382 79 pDVLILDEITSLLDAEQEALLLLLEELRLLLLLKSeknltvILTTNDEKDLGPALLRRRFDRRI 142
|
|
| PRK08116 |
PRK08116 |
hypothetical protein; Validated |
181-283 |
1.37e-05 |
|
hypothetical protein; Validated
Pssm-ID: 236153 [Multi-domain] Cd Length: 268 Bit Score: 46.94 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 181 FDSFVVGKPNEFAYACARRVAES-----PASVGfnpLFLYGGVGLGKTHLMHAIAWELLNRaaqpAVSVAYMSAEKFMYR 255
Cdd:PRK08116 84 FENFLFDKGSEKAYKIARKYVKKfeemkKENVG---LLLWGSVGTGKTYLAACIANELIEK----GVPVIFVNFPQLLNR 156
|
90 100 110
....*....|....*....|....*....|..
gi 1285905147 256 fIAAIRSQSTMEFKEQ----LRGVDVLMVDDL 283
Cdd:PRK08116 157 -IKSTYKSSGKEDENEiirsLVNADLLILDDL 187
|
|
| PRK06030 |
PRK06030 |
hypothetical protein; Provisional |
454-513 |
1.92e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 180356 Cd Length: 124 Bit Score: 41.30 E-value: 1.92e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 454 QVAMYLAKQLTSRSLPEIGRKFGnRDHTTVMHAVARVgELMERDASFAEDVELLRRMLES 513
Cdd:PRK06030 58 QIAMYVAHVSLGWPMNEVALAFG-RDRTTVGHACHTV-EDLRDDAAFDARVSVLERIVNS 115
|
|
| PRK06921 |
PRK06921 |
hypothetical protein; Provisional |
181-332 |
4.74e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 180750 [Multi-domain] Cd Length: 266 Bit Score: 42.07 E-value: 4.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 181 FDSFVV-GKPNEF--AYACARRVAESPASVG---FNPLFLYGGVGLGKTHLMHAIAWELLnraAQPAVSVAYmsaekFMY 254
Cdd:PRK06921 83 FKNFKTeGKPQAIkdAYECAVEYVKDFEKIQesrKNSIALLGQPGSGKTHLLTAAANELM---RKKGVPVLY-----FPF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1285905147 255 R--FIAAIRSQSTMEFK-EQLRGVDVLMVDDL-QFLIGK----DNTQEEFFHTFNALVDAGKQIVVSADKSPSDLSGLED 326
Cdd:PRK06921 155 VegFGDLKDDFDLLEAKlNRMKKVEVLFIDDLfKPVNGKpratEWQIEQMYSVLNYRYLNHKPILISSELTIDELLDIDE 234
|
....*.
gi 1285905147 327 RLRTRL 332
Cdd:PRK06921 235 ALGSRI 240
|
|
| PRK08939 |
PRK08939 |
primosomal protein DnaI; Reviewed |
212-283 |
5.17e-04 |
|
primosomal protein DnaI; Reviewed
Pssm-ID: 236353 [Multi-domain] Cd Length: 306 Bit Score: 42.16 E-value: 5.17e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1285905147 212 LFLYGGVGLGKTHLMHAIAWELLNRAAqpAVSVAYMSAekfmyrFIA----AIRSQSTMEFKEQLRGVDVLMVDDL 283
Cdd:PRK08939 159 LYLYGDFGVGKSYLLAAIANELAKKGV--SSTLLHFPE------FIRelknSISDGSVKEKIDAVKEAPVLMLDDI 226
|
|
| |
