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Conserved domains on  [gi|1281037501|ref|XP_023003318|]
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heavy metal-associated isoprenylated plant protein 43-like [Cucurbita maxima]

Protein Classification

heavy-metal-associated domain-containing protein( domain architecture ID 10449815)

heavy-metal-associated domain-containing protein may function as a heavy metal transporter and/or detoxification protein; such as heavy metal-associated isoprenylated plant proteins

Gene Ontology:  GO:0046872
PubMed:  12443926|8905098

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HMA pfam00403
Heavy-metal-associated domain;
6-57 1.04e-05

Heavy-metal-associated domain;


:

Pssm-ID: 459804 [Multi-domain]  Cd Length: 58  Bit Score: 40.30  E-value: 1.04e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1281037501   6 TVLKLDISCQKCKTKVLKAVTSLEDVDKVETDEAKGTIGVIGKADPYKIVKI 57
Cdd:pfam00403   1 TFRVSGMHCGGCAAKVEKALSELPGVLSVSVDLATKTVTVTGDAESTKLEKL 52
 
Name Accession Description Interval E-value
HMA pfam00403
Heavy-metal-associated domain;
6-57 1.04e-05

Heavy-metal-associated domain;


Pssm-ID: 459804 [Multi-domain]  Cd Length: 58  Bit Score: 40.30  E-value: 1.04e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1281037501   6 TVLKLDISCQKCKTKVLKAVTSLEDVDKVETDEAKGTIGVIGKADPYKIVKI 57
Cdd:pfam00403   1 TFRVSGMHCGGCAAKVEKALSELPGVLSVSVDLATKTVTVTGDAESTKLEKL 52
CopZ COG2608
Copper chaperone CopZ [Inorganic ion transport and metabolism];
5-73 1.10e-03

Copper chaperone CopZ [Inorganic ion transport and metabolism];


Pssm-ID: 442020 [Multi-domain]  Cd Length: 71  Bit Score: 35.27  E-value: 1.10e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1281037501   5 KTVLKLD-ISCQKCKTKVLKAVTSLEDVDKVETDEAKGTIGVIGKADPYKIVKItRKAVSSAGKVVEVVS 73
Cdd:COG2608     3 TVTLKVEgMTCGHCVARVEKALKALDGVASVEVDLATGTATVTYDPEKVSLEDI-KAAIEEAGYEVEKAE 71
 
Name Accession Description Interval E-value
HMA pfam00403
Heavy-metal-associated domain;
6-57 1.04e-05

Heavy-metal-associated domain;


Pssm-ID: 459804 [Multi-domain]  Cd Length: 58  Bit Score: 40.30  E-value: 1.04e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1281037501   6 TVLKLDISCQKCKTKVLKAVTSLEDVDKVETDEAKGTIGVIGKADPYKIVKI 57
Cdd:pfam00403   1 TFRVSGMHCGGCAAKVEKALSELPGVLSVSVDLATKTVTVTGDAESTKLEKL 52
CopZ COG2608
Copper chaperone CopZ [Inorganic ion transport and metabolism];
5-73 1.10e-03

Copper chaperone CopZ [Inorganic ion transport and metabolism];


Pssm-ID: 442020 [Multi-domain]  Cd Length: 71  Bit Score: 35.27  E-value: 1.10e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1281037501   5 KTVLKLD-ISCQKCKTKVLKAVTSLEDVDKVETDEAKGTIGVIGKADPYKIVKItRKAVSSAGKVVEVVS 73
Cdd:COG2608     3 TVTLKVEgMTCGHCVARVEKALKALDGVASVEVDLATGTATVTYDPEKVSLEDI-KAAIEEAGYEVEKAE 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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