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Conserved domains on  [gi|1280985193|ref|XP_022976023|]
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protein DOG1-like 4 [Cucurbita maxima]

Protein Classification

DOG1 domain-containing protein( domain architecture ID 10624400)

DOG1 (DELAY OF GERMINATION 1) domain-containing protein similar to Arabidopsis thaliana DOG1 that is required for the induction of seed dormancy

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DOG1 pfam14144
Seed dormancy control; This family of plant proteins appears to be a highly specific ...
 24-101 8.18e-28

Seed dormancy control; This family of plant proteins appears to be a highly specific controller seed dormancy.


:

Pssm-ID: 464092  Cd Length: 76  Bit Score: 101.08  E-value: 8.18e-28
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1280985193  24 QLSSTTTAAKENRSSttDDLRHLVHTVMSHYSDYYHVKSLAAERDPLSVFSAPWATSLERSLHWIAGWRPTTTFHLIY 101
Cdd:pfam14144   1 QLKELRAALQSHASD--SELRALVDKVLAHYDEYYRAKSAAAKADVFHLLSPPWKTPLERCFLWLGGFRPSELIKLLY 76
 
Name Accession Description Interval E-value
DOG1 pfam14144
Seed dormancy control; This family of plant proteins appears to be a highly specific ...
 24-101 8.18e-28

Seed dormancy control; This family of plant proteins appears to be a highly specific controller seed dormancy.


Pssm-ID: 464092  Cd Length: 76  Bit Score: 101.08  E-value: 8.18e-28
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1280985193  24 QLSSTTTAAKENRSSttDDLRHLVHTVMSHYSDYYHVKSLAAERDPLSVFSAPWATSLERSLHWIAGWRPTTTFHLIY 101
Cdd:pfam14144   1 QLKELRAALQSHASD--SELRALVDKVLAHYDEYYRAKSAAAKADVFHLLSPPWKTPLERCFLWLGGFRPSELIKLLY 76
 
Name Accession Description Interval E-value
DOG1 pfam14144
Seed dormancy control; This family of plant proteins appears to be a highly specific ...
 24-101 8.18e-28

Seed dormancy control; This family of plant proteins appears to be a highly specific controller seed dormancy.


Pssm-ID: 464092  Cd Length: 76  Bit Score: 101.08  E-value: 8.18e-28
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1280985193  24 QLSSTTTAAKENRSSttDDLRHLVHTVMSHYSDYYHVKSLAAERDPLSVFSAPWATSLERSLHWIAGWRPTTTFHLIY 101
Cdd:pfam14144   1 QLKELRAALQSHASD--SELRALVDKVLAHYDEYYRAKSAAAKADVFHLLSPPWKTPLERCFLWLGGFRPSELIKLLY 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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