|
Name |
Accession |
Description |
Interval |
E-value |
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-488 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 623.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLP-ERHNLIRWSSLIITLIPFTLSIMLYAGFDRSVSGFsypgglQFVERYSWIQAFNIELFL 79
Cdd:COG1008 5 LLSLLILLPLLGALLLLLLPrRNARLARWVALAVSLLTLLLSLYLLAGFDPGTGGF------QFVESYPWIPSLGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 80 GVDGLSMPMALLCTMLCPLCVLASWG-IDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPD 158
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNeIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGER 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 159 REYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVE 238
Cdd:COG1008 159 RIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 239 APTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGM 318
Cdd:COG1008 239 APTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 319 ASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALV 398
Cdd:COG1008 319 FALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLV 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 399 LLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVLGIYPHPILALMKPT 478
Cdd:COG1008 399 LLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDLIEPS 478
|
490
....*....|
gi 1278113921 479 VRFINNLITG 488
Cdd:COG1008 479 VEALLARVGA 488
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-479 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 557.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHN-LIRWSSLIITLIPFTLSIMLYAGFDRSVSGFsypgglQFVERYSWIQAFNIELFL 79
Cdd:PRK05846 5 LLSLLIFLPLIGGLLVLLTERFGArLARWIALIGTLLTLLLSLVLWIGFDSSNAGF------QFVEKHPWIPRFGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 80 GVDGLSMPMALLCTMLCPLCVLASWG-IDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPD 158
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEeIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKN 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 159 REYAAIKFYIYTLIGSLMMLLVIIYMYLSATP--HTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAH 236
Cdd:PRK05846 159 RIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNatGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAH 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 237 VEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLL 316
Cdd:PRK05846 239 VQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 317 GMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEA 396
Cdd:PRK05846 319 GIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEF 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 397 LVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVLGIYPHPILALMK 476
Cdd:PRK05846 399 LILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPLLDVIH 478
|
...
gi 1278113921 477 PTV 479
Cdd:PRK05846 479 PSV 481
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
2-486 |
3.73e-178 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 508.33 E-value: 3.73e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 2 LTLIIFIPVIGGLIILFLP-ERHNLIRWSSLIITLIPFTLSIMLYAGFDRSVSGFsypgglQFVERYSWIQAFNIELFLG 80
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPsNKDGKARWIALVVALATLLLSLLLLFQFDPTGSGF------QFTEDIPWIPALGISYHLG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMALLCTMLCPLCVLASW-GIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDR 159
Cdd:TIGR01972 75 VDGISLLLVLLTALLTLLAILASWeSIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 160 EYAAIKFYIYTLIGSLMMLLVIIYMYLSaTPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEA 239
Cdd:TIGR01972 155 IYAAMKFFLYTLAGSLLMLLAILGLYFL-GGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 240 PTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMA 319
Cdd:TIGR01972 234 PTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 320 SLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVL 399
Cdd:TIGR01972 314 SFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 400 LGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKL-NEKYAVFPDINAREFISLLPLGILVIVLGIYPHPILALMKPT 478
Cdd:TIGR01972 394 LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELsNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLTEPS 473
|
....*...
gi 1278113921 479 VRFINNLI 486
Cdd:TIGR01972 474 VNNLLSQV 481
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
25-468 |
4.92e-132 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 391.70 E-value: 4.92e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 25 LIRWSSLIITLIPFTLSIMLYA-GFDRSVSGFsypgglQFVERYSWIQAFNIELFLGVDGLSMPMALLCTMLCPLCVLAS 103
Cdd:PRK12561 6 TVRWYALGVGLADFALMCYVFWqHYDPSSSSL------QLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 104 WGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIY 183
Cdd:PRK12561 80 WKVTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 184 MYLSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVN 263
Cdd:PRK12561 160 LALSGDTFTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFN 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 264 YMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAML 343
Cdd:PRK12561 240 VQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAAL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 344 FLLVGVIYDRAHHRRIDGFGGIASVAPnyavISFlAFF-----AALGLPGLNSFISEALVLLG-----AF-QKYRIITAV 412
Cdd:PRK12561 320 FFLTGVTYERTHTLSIPNMGGLAKVMP----KTF-ALFtassmASLALPGMSGFVSELTVFLGitssdVYsSTFRTITIL 394
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 413 -SATGVIITAAYCLWTIQRIFLGKLNEKY---AVFPDINAREFISLLPLGILVIVLGIYP 468
Cdd:PRK12561 395 lAAVGLILTPIYLLSMLRRVFYGPRSELLpalAVVEDAKPRELFIALSLLVPIIGIGFYP 454
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-468 |
2.91e-120 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 362.49 E-value: 2.91e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 2 LTLIIFIPVIGGLIILFLPERHN--LIRWSSLIITLIPFTLSI-MLYAGFDrsvsgFSYPGgLQFVERYSWIQAFNIELF 78
Cdd:PRK02546 9 LTTIILFPIVAALLIPFIPDKGDgkTVRWYALIVGLIDFLITVyAFYTGYD-----FSNPG-LQLVESYSWLPQLGLTWS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 79 LGVDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPD 158
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 159 REYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVE 238
Cdd:PRK02546 163 RQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 239 APTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGM 318
Cdd:PRK02546 243 ATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 319 ASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALV 398
Cdd:PRK02546 323 GSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMV 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 399 LLG-------AFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEK---YAVFPDINAREFISLLPLGILVIVLGIYP 468
Cdd:PRK02546 403 FVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKElvsHEKLVDAEPREVFIIACLLVPIIGIGLYP 482
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
2-482 |
1.60e-106 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 326.13 E-value: 1.60e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 2 LTLIIFIPVIGGLIILFLPERHN-LIRWSSLIITLIPFTL-SIMLYAGFDrsvsgFSYPGgLQFVERYSWIQAFNIELFL 79
Cdd:CHL00011 7 LTIIVVLPIFAGSLIFFLPHRGNkVIRWYTLCICLLELLLtTYAFCYHFQ-----LDDPL-IQLKEDYKWINFFDFHWRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 80 GVDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDR 159
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 160 EYAAIKFYIYTLIGSLMMLLVIIYM--YLSATPhTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHV 237
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLIGVLGMglYGSNEP-TLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 238 EAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLG 317
Cdd:CHL00011 240 EAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 318 MASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPN-YAVISFLAfFAALGLPGLNSFISEA 396
Cdd:CHL00011 320 IGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKiFTMFSSFS-MASLALPGMSGFVAEL 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 397 LVLLGAF--QKYR-----IITAVSATGVIITAAYCLWTIQRIFLG--KLNEKYAVFPDINARE-FISLLPLgILVIVLGI 466
Cdd:CHL00011 399 IVFFGIItsQKYLlmpkiLITFVMAIGMILTPIYLLSMLRQMFYGykLFNVPNSYFFDSGPRElFISICIL-LPVIGIGI 477
|
490
....*....|....*.
gi 1278113921 467 YPHPILALMKPTVRFI 482
Cdd:CHL00011 478 YPDFVLSLSVDKVEAI 493
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-479 |
2.43e-106 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 325.89 E-value: 2.43e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHN--LIRWSSLIITLIPFTLSIMLYAGFDRSvsgfsyPGGLQFVERYSWIQAFNIELF 78
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSGINgkLARSVALVIASVLLLLSLVLAFQFDPG------NPNQQFTEFIPWIDSLGLSYH 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 79 LGVDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPD 158
Cdd:PRK06473 75 LGVDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 159 REYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVE 238
Cdd:PRK06473 155 RGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVE 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 239 APTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGM 318
Cdd:PRK06473 235 ASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 319 ASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFL---AFFAALGLPGLNSFISE 395
Cdd:PRK06473 315 AAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLmilGVMASAGIPGMVGFIAE 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 396 ALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVLGIYPHPILALM 475
Cdd:PRK06473 395 FLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVVLGIQPSWLVRWT 474
|
....
gi 1278113921 476 KPTV 479
Cdd:PRK06473 475 EPTA 478
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
1-482 |
2.28e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 301.97 E-value: 2.28e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPeRHNLIRW--SSLIITLIPFTLSIMLYAGFDRSvsgfsypGGLQFVERYSWI---QAFNI 75
Cdd:MTH00217 1 MLELVFILPLIGILHLLIIP-RDNIVRLkkIALEWSLLTLTATILLWASFDGE-------GQFQAIKKFEWIpgiEPVFG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 76 ELFLGVDGLSMPMALLCTMLCPLCVLASWG-IDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVW 154
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILISWNsIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 155 GGPDRE-YAAIKFYIYTLIGSLMMLLVIIYMYLSATphTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLP 233
Cdd:MTH00217 153 GSREEKvQASYYFFFYTFIGSVFMLLGIFTLYSYAG--TTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 234 DAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGY 313
Cdd:MTH00217 231 QAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 314 VLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFI 393
Cdd:MTH00217 311 VTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFV 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 394 SEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGkLNEKYAVFP-DINAREFISLLPLGILVIVLGIYPHPIL 472
Cdd:MTH00217 391 GEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFG-APSKYLYFSrDLNRREFYVLLPLVFLIYLMGIFPFIII 469
|
490
....*....|
gi 1278113921 473 ALMKPTVRFI 482
Cdd:MTH00217 470 DVIKSSVIFQ 479
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-478 |
2.70e-95 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 297.39 E-value: 2.70e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPER--HNLIRWSSLIITLIPFTLSIMLYAGFDRSVSGFsypgglQFVERYSWIQAFNIELF 78
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGNlpSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGM------QFQEYLPWNEPLGLSYS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 79 LGVDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPD 158
Cdd:PRK07363 75 LGVDGLSLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 159 REYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVE 238
Cdd:PRK07363 155 RGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTE 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 239 APTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGM 318
Cdd:PRK07363 235 ASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 319 ASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVIS---FLAFFAALGLPGLNSFISE 395
Cdd:PRK07363 315 AAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSallVLAGMASAGIPGLVGFVAE 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 396 ALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVLGIYPHPILALM 475
Cdd:PRK07363 395 FIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALILFLGVQPNWLVRWS 474
|
...
gi 1278113921 476 KPT 478
Cdd:PRK07363 475 EPT 477
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
1-481 |
1.27e-94 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 295.05 E-value: 1.27e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLP-ERHNLIRWSSLIITLIPFTLSIMLYAGFDRSvsgfsypGGLQFVERYSWI--QAFNIE- 76
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPrENSVKLKKRALEWSLAILFSTLVLWGAFDGE-------GQFQFINLIEWIisPTLNFQw 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 77 --LFLGVDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLL-LETGMIGVFCALDFFLFFISWEVMLLPMYFLIGV 153
Cdd:MTH00204 75 gpLVFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLfLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 154 WGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWL 232
Cdd:MTH00204 155 WGSrEEKVRASYYFFFYTFAGSVFMLLGIFQLY--SITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 233 PDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMG 312
Cdd:MTH00204 233 PQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 313 YVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSF 392
Cdd:MTH00204 313 LVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 393 ISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKlNEKYAVFP-DINAREFISLLPLGILVIVLGIYPHPI 471
Cdd:MTH00204 393 VGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGG-GSNYLLFSrDLNRRELLAILPLIIAIFLLGIVPFII 471
|
490
....*....|
gi 1278113921 472 LALMKPTVRF 481
Cdd:MTH00204 472 IDLVKNSLVF 481
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-426 |
2.64e-90 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 282.04 E-value: 2.64e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIRWSSLIITLIPFTLSIMLYAGFDRSVSGFSYPGGlqfverysWIQAFNIELFlg 80
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGG--------WPAPFGIVLV-- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMALLCTMLCPLCVLASWG---IDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGP 157
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGymrHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 158 DREYAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQLGAGME--FKTLCWIVLFIGFAIKVPVFPFHTWLPDA 235
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGAT--GTLNMADLAARLAELDpgLLLAAFALLLVGFGIKAALFPLHFWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 236 HVEAPTAISVILAGVLLKMGTYGMLRVNYMMFP-DVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYV 314
Cdd:COG0651 232 YPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 315 LLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFIS 394
Cdd:COG0651 312 LLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
410 420 430
....*....|....*....|....*....|..
gi 1278113921 395 EALVLLGAFQKYRIITAVSATGVIITAAYCLW 426
Cdd:COG0651 392 KWLLLQAALEAGAWLLAAVLLLSSLLTLAYFV 423
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
77-482 |
3.22e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 232.12 E-value: 3.22e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 77 LFLGVDGLSMPMALLCTMLCPLCVLASW-GIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWG 155
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWhSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 156 G-PDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMTRLAQLGAGMEFKTLCWIVL--FIGFAIKVPVFPFHTWL 232
Cdd:MTH00226 176 SrEEKMQAAYYFFFYTLIGSVLMLLCLFSLY--NIHGTTDYLTLASCSHVVSEQTQKWIFLgiFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 233 PDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMG 312
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 313 YVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSF 392
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 393 ISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVLGIYPHPIL 472
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFIL 493
|
410
....*....|
gi 1278113921 473 ALMKPTVRFI 482
Cdd:MTH00226 494 EVIQNSLFFL 503
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-474 |
1.55e-69 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 229.77 E-value: 1.55e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIRWSSLIITLIPFTLSIMLYA----GFDRSVSGFSYPGGLqfveryswiqafNIE 76
Cdd:PRK08375 5 LLPLLVAVPLLAAALIVLLPKRRRLRWALALLVAALTFALAISLLPqvldGGVIAYVVGGWPPGI------------GIE 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 77 LflGVDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFF-LFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWG 155
Cdd:PRK08375 73 L--RADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYaLFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 156 GPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATphTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDA 235
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTG--TLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 236 HVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFK---MSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMG 312
Cdd:PRK08375 229 YPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 313 YVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSF 392
Cdd:PRK08375 309 YILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 393 ISEALVLLGAFQKYRIITAVSATGV-IITAAYCLWTIQRIFLGK-LNEKYAVFPDINAREFISLLPLGILVIVLGIYPHP 470
Cdd:PRK08375 389 VSKWYLVVGAVEAGQWLVLAVLLASsLLALLYFLRIWYRAFFGPpPPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGP 468
|
....
gi 1278113921 471 ILAL 474
Cdd:PRK08375 469 LLQL 472
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
70-468 |
3.05e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 217.50 E-value: 3.05e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 70 IQAFNIELFLGVDGLSMPMALLCTMLCPLCVLASWGIDKGIKG-----YFFLFLLLETGMIGVFCALDFFLFFISWEVML 144
Cdd:MTH00206 46 VGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPInrqriYITLLIVLQLFLILFFSSSNLLLFYILFEASL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 145 LPMYFLIGVWG-GPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKV 223
Cdd:MTH00206 126 IPTLLLITRWGnQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSL--GSLSLYILYFSKLTTWNNNLWWLACILAFLVKL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 224 PVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPdVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLV 303
Cdd:MTH00206 204 PLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGP-STKLSSYFFIILGLWGSIMTSSICLRQTDLKSLI 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 304 AYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAA 383
Cdd:MTH00206 283 AYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLAN 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 384 LGLPGLNSFISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIV 463
Cdd:MTH00206 363 LGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVIL 442
|
....*
gi 1278113921 464 LGIYP 468
Cdd:MTH00206 443 LILNP 447
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
130-404 |
9.82e-57 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 190.22 E-value: 9.82e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 130 ALDFFLFFISWEVMLLPMYFLIGVWGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMYLSA-TPHTFDMTRLAQLGAGMEF 207
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKsPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTgTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 208 KTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFkMSMFIAVLGMINII 287
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPF-IQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 288 YGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVG-VIYDRAHHRRIDGFGGIA 366
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGsVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*...
gi 1278113921 367 SVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQ 404
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVA 277
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-479 |
8.74e-56 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 194.03 E-value: 8.74e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 2 LTLIIFIPVIGG----LIILFLPERHNLIRWSSLIITLIPFTLSIMLYAGFDRSVSGFSYPGGlqfverySWIQAFNIel 77
Cdd:PRK12667 6 VGLTPILLVLFAfllpLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-------GWPAPIGI-- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 78 FLGVDGLSMPMALLCTMLCPLCVLASW---GIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVW 154
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYwylEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 155 G-GPDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMTRLAQLGAGMEFK-------TLCWIVLFIG------FA 220
Cdd:PRK12667 157 RdRGDAVEAAIKYALIGAVGTTLYFLALAFLY--ATFGTLNMADLSAKIRGLSFPltgglagNPPLALGVALalalwaFT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 221 IKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMF------PDVTFKMSMFIAVLGMINIIYGAFCAM 294
Cdd:PRK12667 235 IKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFgispslIDFRAALSPILIILGAVSAIIGALMMV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 295 AQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAV 374
Cdd:PRK12667 315 VQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASF 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 375 ISFLAFFAALGLPGLNSFISEaLVLLGAFQKYRIITAVSAtgVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFIS- 453
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSK-LLLFNALLESGFYLPALV--LLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESPSm 471
|
490 500 510
....*....|....*....|....*....|...
gi 1278113921 454 ---LLPLGILVIVLGIY----PHPILALMKPTV 479
Cdd:PRK12667 472 svvILVLALAVLILGILalflPEILDSLIEPAA 504
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-462 |
2.69e-55 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 191.34 E-value: 2.69e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIpvIGGLIILFLPERHNLirWSSLII-TLIPFTLSIMLYAGFDRSvsgfsypgglqfverySWiqaFNIELFL 79
Cdd:MTH00044 1 MITLILLS--LGIAITSWIVPKNKL--WPISISqSSLISLLSLFLLNNHWSS----------------SW---HNLSLSL 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 80 GVDGLSMPMALLCTMLCPLCVLASWGI-----DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVW 154
Cdd:MTH00044 58 ATDSLSSPLIILSCWLAPLSLLASINHlsnnsPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRW 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 155 GGP-DREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAG-MEFKTLCWIVLFIGFAIKVPVFPFHTWL 232
Cdd:MTH00044 138 GAQkERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLsSNSSSIWWIFCILAFLVKMPIYGFHLWL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 233 PDAHVEAPTAISVILAGVLLKMGTYGMLR-VNYMMFPDVTFKMSMFIAVLGMINIIYGAFCaMAQKDLKRLVAYSSISHM 311
Cdd:MTH00044 218 PKAHVEAPVAGSMILAAILLKLGGYGLIRlINLFSLPSANNISFILIVFCCWGALITSIIC-LRQTDLKALIAYSSVGHM 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 312 GYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNS 391
Cdd:MTH00044 297 SLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPN 376
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1278113921 392 FISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINARE----FISLLPLGILVI 462
Cdd:MTH00044 377 LIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREhlliFLHLLPLILIII 451
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
73-395 |
9.81e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 186.90 E-value: 9.81e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 73 FNIELFLGVDGLSMPMALLCTMLCPLCVLASWGIDKG---IKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYF 149
Cdd:MTH00163 46 SNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKnnySNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLF 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 150 LIGVWG-GPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMtrlaqLGAGMEFKTLCWIVLFIGFAIKVPVFPF 228
Cdd:MTH00163 126 LILGWGyQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFL-----LNFFGSLNFLWYLSMILAFLVKMPMFFV 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 229 HTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFpDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSI 308
Cdd:MTH00163 201 HLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFS-KLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSV 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 309 SHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPG 388
Cdd:MTH00163 280 AHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPP 359
|
....*..
gi 1278113921 389 LNSFISE 395
Cdd:MTH00163 360 SLNLLGE 366
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
78-464 |
3.96e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 184.66 E-value: 3.96e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 78 FLGVDGLSMPMALLCTMLCPLCVLASWGiDKGIKGYFFLF----LLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGV 153
Cdd:MTH00150 19 LFSVDSMSSLLISLSLWISGLMMLASQK-SVKLRNKSSSFsllvLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 154 WGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWL 232
Cdd:MTH00150 98 WGYqPERLQAGMYMMLYTVGASLPLLLVILWMSSSY--GSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 233 PDAHVEAPTAISVILAGVLLKMGTYGMLRVnYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMG 312
Cdd:MTH00150 176 PKAHVEAPVAGSMILAGILLKLGGYGILRM-MMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 313 YVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSF 392
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1278113921 393 ISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVL 464
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-491 |
8.80e-51 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 182.50 E-value: 8.80e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 2 LTLIIFIPVIGGLIILFLPErhnlIRWS-SLIITLIPFTLSIMLYagfdrsvsgFSYPGGlqFVERYsWIQAFNIELFLG 80
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLLKK----INEKiGVIGNALPLLFLIKLY---------FTLKVG--TGEKL-TLFFGGFKLTFT 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLE-TGMIGVFCALDFFLFFISWEVMLLPMYFLIgVWGGPDR 159
Cdd:PRK08668 67 LTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSlAGVLGVFLANDLLTLYIFWEIMTFSSFMMV-PMGKKES 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 160 EYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMTRLAQlGAGMEFKT-LCWIVLF--IGFAI-KVPVFPFHTWLPDA 235
Cdd:PRK08668 146 RKASLKYFVLSAIGAYAMLYAIFLIY--AKTGTFDFADISQ-GLINDTSTgFALIVFLflLAFGVaKAGIFPLHVWAPDA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 236 HVEAPTAISVILAGVLLKMGTYGMLRVNYM-----MFPDVTFKMSM-----FIAVLGMINIIYGAFCAMAQKDLKRLVAY 305
Cdd:PRK08668 223 YSEAPQSFSAVLSGQLSKLGAYGFLLVLYVlpgtkLFSEFGTYRGVplfnyILAWLGNISIIVGTLMAILQEDIKKLIAY 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 306 SSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALG 385
Cdd:PRK08668 303 SSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 386 LPGLNSFISEALVLLGAFQKYRIITAVSA-TGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVL 464
Cdd:PRK08668 383 IPPMSGFASKWLIFEALISKGMPITAFMAfFGSIGSFLYVFRPLAGVFLGQLPSDHKDVKEAPLPMLIPMAILVLLNVVF 462
|
490 500
....*....|....*....|....*..
gi 1278113921 465 GIYPHPILalmkptvRFINNLITGSGI 491
Cdd:PRK08668 463 GVAPGLVL-------QEINKIFGELGI 482
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
1-474 |
2.86e-50 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 178.99 E-value: 2.86e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIRWSSLIITLIPFTLSIMLYAGFDRS------VSGFSYPGGLQFVeryswiqafn 74
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFLRNRDRLQRYLAIGTLTILTLISLALLIYVQRHgpitldFGGWLPPFGIQFT---------- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 75 ielflgVDGLSMPMALLCTMLCPLCVLASWG-IDKGIKGYFF--LFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLI 151
Cdd:PRK12663 75 ------GDSLSALMVTTASFVATAIMAYGFGdIEHSGRRYGFppFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLI 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 152 GVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMT----RLAQLGAGMEFKTLCwIVLFIGFAIKVPVFP 227
Cdd:PRK12663 149 TLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLY--GTFGTLNMAhiamRLNDMGDTATLTTIA-LLFLLAFGMKAALFP 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 228 FHtWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSS 307
Cdd:PRK12663 226 FM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQV 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 308 ISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLP 387
Cdd:PRK12663 305 ISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLP 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 388 GLNSFISEALVLLGAFQKYRIITAVSAtgvIITAAYCLWTIQRIFL----GKLNEKYAVFPDINAREFISLLPLGILVIV 463
Cdd:PRK12663 385 PFSGFWGKVLLVQGALDNGAYILLALM---LITSLITMYSLFRIFFlaywGDKDGEEVNFKPIPLYRKLPLSILAVVVIA 461
|
490
....*....|.
gi 1278113921 464 LGIYPHPILAL 474
Cdd:PRK12663 462 MGIAAEPLLNL 472
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
78-430 |
2.73e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 172.79 E-value: 2.73e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 78 FLGVDGLSMPMALLCTMLCPLCVLASWGIDKG-----IKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIG 152
Cdd:MTH00068 55 YFGIDQISSPLLILTCWLLPLMILASQNHLKNepinrQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIIT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 153 VWGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMYLSA-TPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHT 230
Cdd:MTH00068 135 RWGNqEERLNAGTYFLFYTLAGSLPLLIALLILQNSLgSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 231 WLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNyMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISH 310
Cdd:MTH00068 215 WLPKAHVEAPIAGSMILAAVLLKLGGYGILRIS-ILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSH 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 311 MGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLN 390
Cdd:MTH00068 294 MGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSP 373
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1278113921 391 SFISEALVLLGAFQKYRIITAVSATGVIITAAYCL---WTIQR 430
Cdd:MTH00068 374 NLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLymfLMTQR 416
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-473 |
6.78e-48 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 174.57 E-value: 6.78e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPER--HNLIRWSSLIITLIPFTLSIMLYagfdrsvsgFSYPGGLQFVERYSWIQA--FNIE 76
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRlgRRAAGWLAALAPLAAFVLSLLLF---------PAVLGGEVVVELYTWIPVgsLGLD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 77 LFLGVDGLSMPMALLCTMLCPLCVLASWGI---DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGV 153
Cdd:COG1009 74 FGFRLDGLSLLMLLLVTGVGLLVHIYSIGYmsgDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGF 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 154 W-GGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRL-AQLGAGMEFKTLCWIV--LFIGFAIKVPVFPFH 229
Cdd:COG1009 154 WyEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIA--GTLNFSELlAAAPTILSSPLLTLILllLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 230 TWLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRVN--YMMFPDVtfkmSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYS 306
Cdd:COG1009 232 FWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSplFALSPVW----LTVVAIIGAITALFAALIALAQTDIKRVLAYS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 307 SISHMGY--VLLGMASLTeeglnGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAAL 384
Cdd:COG1009 307 TVSQLGYmfLALGVGAYV-----AALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLA 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 385 GLPGLNSFISEALVLLGAFQKYR---IITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFP-DINAREFISLLPLGIL 460
Cdd:COG1009 382 GIPPFAGFFSKEAILEAALEAGGlgpLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPhESPWLMTLPLVVLAVL 461
|
490
....*....|...
gi 1278113921 461 VIVLGIYPHPILA 473
Cdd:COG1009 462 SLVLGLLLPGLLE 474
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
72-480 |
2.87e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 171.05 E-value: 2.87e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 72 AFNIELFLGVDGLSMPMALLCTMLCPLCVLASWGI---DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMY 148
Cdd:PRK08376 79 GFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYmkhDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASY 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 149 FLIGVWG-GPDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMTRLA-QLGAGMEFKTLCWIVLFI-GFAIKVPV 225
Cdd:PRK08376 159 ALVAFRNdTWEAIEAGIKYMFVGSLASSMVLLGIALLY--GQYGTLNMAYLAvKMSENPTVVAKIALALFIaGLAMKSGA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 226 FPFHTWLPDAHVEAPTAISVILAgVLLKMGTYGMLRVNYMMFPDV--TFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLV 303
Cdd:PRK08376 237 VPVHMWLPDAYPAAPSSISAMLL-VIKQAGLYALARVLFSIYGPAinLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLL 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 304 AYSSISHMGYVLLG------------MASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPn 371
Cdd:PRK08376 316 AYHSVSQIGYMLLGlgvglaalgdpaMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMP- 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 372 YAVISFLAFFAAL-GLPGLNSFISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINARE 450
Cdd:PRK08376 395 KTTIAFLIGAAAIvGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPM 474
|
410 420 430
....*....|....*....|....*....|.
gi 1278113921 451 FISLLPLGILVIVLGIYPHPIL-ALMKPTVR 480
Cdd:PRK08376 475 LVPMLILAIAIIGMGLFPWQISdKLMAPAAK 505
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
75-467 |
5.96e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 165.92 E-value: 5.96e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 75 IELFLGVDGLSMPMALLCTMLCPLCVLASWGI---DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLI 151
Cdd:MTH00205 49 ISSSFSFDSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 152 GVWG-GPDREYAAIKFYIYTLIGSLMMLLVIIYMYLsaTPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHT 230
Cdd:MTH00205 129 LGWGyQPERLQASMYMMMYTLCASLPLLIGLFFLNS--LNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 231 WLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFpDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISH 310
Cdd:MTH00205 207 WLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLY-KLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGH 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 311 MGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLN 390
Cdd:MTH00205 286 MGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 391 SFISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLL----PLGILVIVLGI 466
Cdd:MTH00205 366 NLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILIlhwfPLNILILKLKI 445
|
.
gi 1278113921 467 Y 467
Cdd:MTH00205 446 F 446
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
77-425 |
1.66e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 165.13 E-value: 1.66e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 77 LFLGVDGLSMPMALLCTMLCPLCVLAS-----WGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLI 151
Cdd:MTH00127 55 LYMATDPLSTPLLVLTCWLLPLMILASqnhtaPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIII 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 152 GVWGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMYLSA-TPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFH 229
Cdd:MTH00127 135 TRWGNqTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTgTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVH 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 230 TWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAvLGMINIIYGAFCAMAQKDLKRLVAYSSIS 309
Cdd:MTH00127 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFII-LALWGIIMTGSICLRQTDLKSLIAYSSVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 310 HMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGL 389
Cdd:MTH00127 294 HMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPL 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 1278113921 390 NSFISEALVLLGAFQKYRIITAVSATGVIITAAYCL 425
Cdd:MTH00127 374 PNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSL 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-392 |
1.22e-44 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 163.99 E-value: 1.22e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIRWSSLIITLIPFTLSIMLYAGFDRsvsgfsypGGLQFVERYSWIQAFNIELFlg 80
Cdd:PRK12665 4 LAPLPVLLPLLAAALTLVLGRRPRAQRAISLLALSAVLVLSAVLLYLVDR--------DGTQAVQLGGWDAPIGITLV-- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMaLLCTMLCPLCVLAsWGIDKGIKGY-------FFL--FLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLI 151
Cdd:PRK12665 74 VDRLSALM-LVVSSVVLLAVLV-YAIGQGIRDGdeeqpvsIFLptYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 152 GVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDM----TRLAQLGAGMefKTLCWIVLFIGFAIKVPVFP 227
Cdd:PRK12665 152 TLGATAARVRAGVTYVMVSMVSSLLFLIGIALVY--AATGTLNMadlaVRLDELPSGT--RTALFAVLLVAFGIKAAVFP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 228 FHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTF-KMSMFIAVLGMIniiYGAFCAMAQKDLKRLVAYS 306
Cdd:PRK12665 228 LSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLdTLLMVVALLTMV---VGILGAIAQSDIKRLLSFT 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 307 SISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPnyaVISFLAFFAALGL 386
Cdd:PRK12665 305 LVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASP---LLAVLFFVPALNL 381
|
....*.
gi 1278113921 387 PGLNSF 392
Cdd:PRK12665 382 GGIPPF 387
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-425 |
4.58e-44 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 161.06 E-value: 4.58e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIpviggLIILFLPERHNLIRWSSLIITLIPFTLSIMLyagfdrsvsgFSYPGGLQFveryswiqaFNIELFLG 80
Cdd:MTH00014 1 MLKLIMPL-----ISLLLLPLIKYPWSWALTFSTLLLLSLFTLL----------NLYPMSAPY---------SMFTESLS 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMALLCTMLCPLCVLASWGI---DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWG-G 156
Cdd:MTH00014 57 SDMLSAPLITLTLWITALMILASFKIfqnNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGyQ 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 157 PDREYAAIKFYIYTLIGSLMMLLVIIYMYLsaTPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAH 236
Cdd:MTH00014 137 PERLQASFYLMIYTVTASLPLLMSILLIFY--TNNSLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAH 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 237 VEAPTAISVILAGVLLKMGTYGMLRVNYmMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLL 316
Cdd:MTH00014 215 VEAPVAGSMILAGILLKLGGYGLLRMSS-LFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTA 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 317 GMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEa 396
Cdd:MTH00014 294 GIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSE- 372
|
410 420 430
....*....|....*....|....*....|
gi 1278113921 397 LVLLGAFQKYRIITAVS-ATGVIITAAYCL 425
Cdd:MTH00014 373 IMLLTSILSSSLSTAILlAITSFLAAAYSL 402
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
74-357 |
5.54e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 158.05 E-value: 5.54e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 74 NIELFLGVDGLSMPMALLCTMLCPLCVLASWGIDKG---IKGYFFLF--LLLETGMIGVFCALDFFLFFISWEVMLLPMY 148
Cdd:MTH00124 51 NLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHeplQRKRTFLTtlILLQTFLILAFSATELTLFYIMFEATLIPTL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 149 FLIGVWGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMY-LSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVF 226
Cdd:MTH00124 131 ILITRWGNqPERLSAGTYFLFYTLISSLPLLIAILYLHnQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 227 PFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIaVLGMINIIYGAFCAMAQKDLKRLVAYS 306
Cdd:MTH00124 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFL-TLALWGALMTSLICLRQTDLKSLIAYS 289
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1278113921 307 SISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHR 357
Cdd:MTH00124 290 SVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSR 340
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
73-475 |
2.02e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 156.59 E-value: 2.02e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 73 FNIELFLgvDGLSMPMALLCTMLCPLCVLASWG-------IDKgiKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLL 145
Cdd:MTH00110 52 FSLLFFS--DSLSTPLLILTTWLLPLMLMASQHhlskeplTRK--KLYITMLILLQLFLIMTFTATELIMFYILFEATLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 146 PMYFLIGVWGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMY-LSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKV 223
Cdd:MTH00110 128 PTLIIITRWGNqTERLNAGLYFLFYTLVGSLPLLVALLYIQnNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 224 PVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPdVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLV 303
Cdd:MTH00110 208 PLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP-LTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLI 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 304 AYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAA 383
Cdd:MTH00110 287 AYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTN 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 384 LGLPGLNSFISEALVLLGAFQKYRIITAVSATGVIITAAYCLW---TIQRiflGKL----NEKYAVFPDINAREFISLLP 456
Cdd:MTH00110 367 LALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYmliTTQR---GKLthhiNNIKPSFTRENTLMALHLLP 443
|
410
....*....|....*....
gi 1278113921 457 LgilvIVLGIYPHPILALM 475
Cdd:MTH00110 444 L----LLLSLNPKIILGPT 458
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
110-476 |
2.21e-41 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 154.54 E-value: 2.21e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 110 IKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAT 189
Cdd:PRK08377 107 IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 190 phTFDMTRLAQLGAGME--FKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMF 267
Cdd:PRK08377 187 --TLNMAHIAQLAGTIDptVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQ 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 268 PDVTFKMSM-FIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLL 346
Cdd:PRK08377 265 NANGWSSVLkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 347 VGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQK-YRIITAVSATGVIITAAYCL 425
Cdd:PRK08377 345 VGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAgYTWPVALVLGASVVEAVYYF 424
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1278113921 426 WTIQRIFLGKLNEKYAVfpdiNAREFISLLPLGILVIVLGIYPHPILALMK 476
Cdd:PRK08377 425 RLIHTMWFKGEGERIRE----NAAIGIILLLLAALIVVIGIYPTPFWEVVQ 471
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
2-463 |
2.60e-41 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 153.98 E-value: 2.60e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 2 LTLIIFIPVIGGLIILFLPERHnlIRWSSLIITLIPFTLSIMLYAGFDRSVSGFSYPGGLQFVEryswiqafnIELF-LG 80
Cdd:PRK06525 4 ALLTLLLPFIGALVVFFLPGRR--AAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGD---------VALFgLV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMALLCTMLCPLCVLASWG----------IDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFL 150
Cdd:PRK06525 73 IDPVSVLIGFVVVLLGLLVTLYSTGymspgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWAL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 151 IGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQLGAGMefKTLCWIVLFIGFAIKVPVFPFHT 230
Cdd:PRK06525 153 ISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQT--GTFALSALSGLHGSL--KYLVFLGILFAAWGKSAQLPFYS 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 231 WLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRVNYMMFPdVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSIS 309
Cdd:PRK06525 229 WLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGP-IPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTIT 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 310 HMGYVLLG--MASL-TEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGL 386
Cdd:PRK06525 307 QLGYMFFGlsLAILgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGV 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 387 PGLNSFISEALVLLGAFQKYRIITAVSATGVIITA------AYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGIL 460
Cdd:PRK06525 387 PPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIesvasfAWFLRWFGRVVFGEPSEAVADAAPLPGSMKLVLIVLIVM 466
|
...
gi 1278113921 461 VIV 463
Cdd:PRK06525 467 SLV 469
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-433 |
9.08e-41 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 152.80 E-value: 9.08e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIRWSSLIITLIPFTLSIMLYAgfdrsvsgFSYPGGLQFVERYSWIQAFNIELFLg 80
Cdd:PRK07691 5 LVILPILIPVITAILLIFLGKRPIIQRYVALIGSLLTLVAAIILVA--------NVYKHGIQTLELGNWKAPFGIVFVA- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 vDGLSMPMALLCTMLCPLCVLASW---GIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGP 157
Cdd:PRK07691 76 -DMFAALLVLTSSIITFLVILYSFqtiGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 158 DREYAAIKFYIYTLIGSlmMLLVIIYMYLSATPHTFDMT----RLAQLGAGME-FKTLCWIVLFIGFAIKVPVFPFHTWL 232
Cdd:PRK07691 155 IQLRESIKYVLINVVSS--AFFVVAVAILYSVVGTLNMAdisvKIAELSAGQTgLITVVAILFLFVFATKAGLFPLYFWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 233 PDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMG 312
Cdd:PRK07691 233 PGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 313 YVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSF 392
Cdd:PRK07691 313 VILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGF 392
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1278113921 393 ISEALVLLGAFQKYRIitaVSATGVIITAAYCLWTIQRIFL 433
Cdd:PRK07691 393 YGKFFIVEGTFEAGFY---VSGIIVLLSSLLVLYSVIKIFL 430
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-474 |
1.27e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 151.81 E-value: 1.27e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 14 LIILFLPER-HNLIRWSSLIITLIPFTLSIMLYAGFDRSvsgfsypgglqfveryswiqAFNiELFLgVDGLSMPMALLC 92
Cdd:COG1007 22 LLDLFLPRRsRRLLAGLALLGLLLALALLLLALGGGTGT--------------------AFG-GMFV-VDGFALFFKLLI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 93 TMLCPLCVLASWGIDKGIKG----YFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGpDREY--AAIKF 166
Cdd:COG1007 80 LLAALLVLLLSRDYLERRGLlrgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD-DRRSseAALKY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 167 YIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQ-LGAGMEFKTLCWIVL---FIGFAIKVPVFPFHTWLPDAHVEAPTA 242
Cdd:COG1007 159 FLLGALSSGFLLYGISLLYGAT--GSLNLAGIAAaLAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 243 ISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLT 322
Cdd:COG1007 237 VTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGT 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 323 EEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHH-RRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLG 401
Cdd:COG1007 317 PLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEaEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSA 396
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1278113921 402 AFQ-KYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINARefISLLPLGILVIVLGIYPHPILAL 474
Cdd:COG1007 397 AVEaGLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEAPISAPPGLR--VALVIAALLVLLLGIFPGPLLDL 468
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
81-480 |
1.85e-36 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 142.72 E-value: 1.85e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMALLCTMLCPLCVLASWGIDKGIKG--------YFFLFLLletGMIGVFCALDFFLFFISWEVMLLPMYFLig 152
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGkgpgamgfFYNLFLA---SMVLVLLADDAFSFLVAWETMSLSSWFL-- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 153 VWGGPDREYAAIKFYIYTLI---GSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMefKTLCWIVLFIGFAIKVPVFPFH 229
Cdd:PRK06521 153 VIANHREAEIRRAGFLYLLMahaGALAILLAFGLLARESGSYDFAAMRAAHLSPFW--ASLVFLLALFGFGAKAGLVPLH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 230 TWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSIS 309
Cdd:PRK06521 231 VWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIE 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 310 HMGYVLLG-----------MASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFL 378
Cdd:PRK06521 311 NIGIIFVGlglamvfiaygMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLI 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 379 AFFAALGLPGLNSFISEALVLLGAFQK-------YRIITAVSATGVIITAAYCLWTIQR----IFLGKLNEKYAVfpdiN 447
Cdd:PRK06521 391 GCLAISALPPLNGFVSEWLLLQSLLSSpglpqwgLKLAVPIAAAMLALTAALAAMCFVKfygiTFLGRPRSEKAE----E 466
|
410 420 430
....*....|....*....|....*....|....*...
gi 1278113921 448 ARE-----FISLLPLGILVIVLGIYPHPILALMKPTVR 480
Cdd:PRK06521 467 AHEvprwmRAAMLLLAALCVLLGLLPGWVAPVIDPVAQ 504
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-422 |
7.39e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 135.85 E-value: 7.39e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLI-IFIPVIGGLIILFLPerhNLIRWSSLIITLIPFTLSIMLYAGfdrsvsgfSYPGGLQFVEryswiqafNIELFL 79
Cdd:PRK07234 3 SLTPVwIALPFLLGFAIYLLP---KLDRNLALGMAIVSAVYALGLVAS--------MVPLELTLLD--------NFGVTL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 80 GVDGLSMPMALLCTMLCPLCVLASWGIDKgiKGYFFLFLLLETGMIG-VFCALDFFLFFISWEVMLLPMYFLIgVWGGPD 158
Cdd:PRK07234 64 RADALSGYFILTNALVTLAVIFYCWESAK--TRFFYAQLLILHGSVNaAFVCADLISLYVALEVLSIATFLLV-AYPRTD 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 159 REY-AAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMTRLAqlGAGMEFKTLcwivLFIGFAIKVPVFPFHTWLPDAHV 237
Cdd:PRK07234 141 RAIwVGLRYLFYSNVAMLFYLIGAVLVY--QANGTFAFSGLA--TADPEAFAL----IALGLLVKGGIFVSGLWLPLTHS 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 238 EAPTAISVILAGVLLKMGTYGMLRVNYMMfpdvtFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLG 317
Cdd:PRK07234 213 EAEPPVSALLSGVVVKAGVFPLVRCALDV-----PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 318 maslteeGLNGAVLQMfNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIasvapNYAVISFLAFFAALGLPGLNSFISEAL 397
Cdd:PRK07234 288 -------PLVGGLYAL-AHGLVKSTLFLCAGALPSRNFTELISQMLGI-----GKWIPLTMASFSIAGFPLLAGFVSKVL 354
|
410 420
....*....|....*....|....*
gi 1278113921 398 VLLGAFQKYRIITAVSATGVIITAA 422
Cdd:PRK07234 355 TLKNLLPWQAIALNLAAVGTAASFW 379
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
81-474 |
8.11e-35 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 135.72 E-value: 8.11e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPM---ALLCTMLCpLCVLASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGgp 157
Cdd:PRK05777 71 VDGFALFLkglILLASLLA-LLLARPYLEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 158 DREY---AAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQ-LGAGMEFKTLCWI---VLFIGFAIKVPVFPFHT 230
Cdd:PRK05777 148 DRRRsleAAIKYFVLGALASGFLLYGMSLLYGAT--GSLSFAGIAKaLADGSGNSLLLLFglvFLLVGLAFKLSAVPFHM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 231 WLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISH 310
Cdd:PRK05777 226 WTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 311 MGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDR---AHHrrIDGFGGIASVAPNYAVISFLAFFAALGLP 387
Cdd:PRK05777 306 AGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKggeAES--ISDFAGLSKRSPLLAAVMTIFMLSLAGIP 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 388 GLNSFISEALVLLGAFQ-KYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAV-FPDINAREFISLlpLGILVIVLG 465
Cdd:PRK05777 384 PTAGFWGKFYVFEAAVEaGLWWLAVIGVLNSAIGAFYYLRVIKLMYFDEPPRDAPVnWPLSAGGAVLSV--SALLVLVLG 461
|
....*....
gi 1278113921 466 IYPHPILAL 474
Cdd:PRK05777 462 IFPQPLLDL 470
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
116-406 |
2.69e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 133.32 E-value: 2.69e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 116 LFLLletGMIGVFCALDFFLFFISWEVMLLPMYFLI-GVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPhtfd 194
Cdd:PRK08667 119 LFIL---SMLGVVASANTFSFLFFWEIMALSSFFLVmNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGS---- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 195 mTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMF-PDVTFK 273
Cdd:PRK08667 192 -FELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLsPELWWG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 274 MSmfIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMA-----------SLTEEGLNGAVLQMFNHGVVAAM 342
Cdd:PRK08667 271 VL--ILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGlyvifgvygldTLALLALGGALFHSLNHALFKSL 348
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1278113921 343 LFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQKY 406
Cdd:PRK08667 349 LFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSF 412
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
113-475 |
1.91e-32 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 129.28 E-value: 1.91e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 113 YFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHT 192
Cdd:PRK06458 110 YYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYANAATVM 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 193 FD------MTRLAQLGAGME--FKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVnY 264
Cdd:PRK06458 190 GDgemailWTELLKHASLLDptLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRY-Y 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 265 MMFPDVTFKM--SMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAM 342
Cdd:PRK06458 269 ILIDAAIGSDfpGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSA 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 343 LFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQK-YRIITAVSATGVIITA 421
Cdd:PRK06458 349 IFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARgPLLIAILLLLLLTLAF 428
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1278113921 422 AYCLWTIQRIFLGKLNEKYAVfPDINAREFISLLPLGILVIVLGIY-PHPILALM 475
Cdd:PRK06458 429 AALVRRVAGMVFGEPPEAVNR-GDLGWLTTSPMFVHLVLVLVLGLYiPQPLVRWL 482
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
1-468 |
6.64e-31 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 126.88 E-value: 6.64e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLI-ILFLPERHNLIRWSSLIITLIPFTLSIMLYAgfdrsvsgFSYPGGLqFVERYSWIQAFNIELFL 79
Cdd:TIGR00940 1 LHSAFILPPFAASLIpILYPSDQRIHIGWFVLAIPLVCFLYTLGLYP--------YTASGGV-LHYTIDWVPELGLNFTL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 80 GVDGLSMPMALLCTMLCPLCVLASWGI---DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGG 156
Cdd:TIGR00940 72 YMDGLALLFSLLITGIGVLVVLYSIYYlskEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHH 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 157 PDRE-YAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQLGAGMEFKTL---CWIVLFIGFAIKVPVFPFHTWL 232
Cdd:TIGR00940 152 RAHSrYGAQKSLTITVFGGLAMLGGLILLGKIT--GSFSIDAVIASADAIRNSPLfgtAMVLVLLGAFTKSAQFPFHIWL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 233 PDAhVEAPTAISVIL-AGVLLKMGTYGMLRVNYMMfpDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHM 311
Cdd:TIGR00940 230 PDA-MEAPTPVSAYLhSATMVKAGLYLLARFTPVF--AGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQL 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 312 GYVL----LGMASLTEEGLN---------GAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFL 378
Cdd:TIGR00940 307 GLIMvllgLGSPSYHYQGDDskiyalaavAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMI 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 379 AFFAALGLPGLNSFISEALVLLGAFQKYRI-----------ITAVSATGVIITAAYCLWTIQRIFLGKLN-EKYAVFPDI 446
Cdd:TIGR00940 387 ASAAMAGVPPFNGFLSKEMFFAEAITAHLVnpfdtvtlgylFPYVATVASVFTFVYSLRFIHGVFFGRPKpEDLPRKPHE 466
|
490 500
....*....|....*....|...
gi 1278113921 447 NAR-EFISLLPLGILVIVLGIYP 468
Cdd:TIGR00940 467 PPRwMLASPDILVLLVLVFGLFP 489
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
1-484 |
3.84e-30 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 124.65 E-value: 3.84e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIR--WSSLIItliPFTLSImLYAGFDRSVSGfsypgGLQFVERYSWIQAFNIELF 78
Cdd:PRK12645 3 LLHIAILLPFIFALLIPFLYKYFKRIHtgWFVLPV---PVVLFI-YFLSLIPTTMS-----GNTVMKTLPWIPSLGINFT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 79 LGVDGLSMPMALLCTMLCPLCVLASWGIDKGIK---GYFFLFLLLETG-MIGVFCALDFFLFFISWEVMLLPMYFLIGVW 154
Cdd:PRK12645 74 LYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeqlGNFYVYLLLFMGaMLGVVLSDNLIVLYLFWELTSISSFLLISYW 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 155 GGPDRE-YAAIKFYIYTLIGSLMMLLVIIYMYLSA-TPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWL 232
Cdd:PRK12645 154 YEREASrYGAQKSMLITVFGGLSMLGGFILLYIMTgSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 233 PDAhVEAPTAISVIL-AGVLLKMGTYGMLRvnymMFPDVTFKMSMF--IAVLGMINIIYGAFCAMAQKDLKRLVAYSSIS 309
Cdd:PRK12645 234 PDA-MEAPTPVSAYLhSATMVKAGIYLVAR----FTPIFAGSQVWFwtVTLVGLITLFWGSLNAVKQTDLKGILAFSTVS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 310 HMGYVL----LGMASLTEEGLNG---------AVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVIS 376
Cdd:PRK12645 309 QLGLIMsllgIGAASLHYQGDDSkiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIA 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 377 FLAFFAALGLPGLNSFIS-----EALVLLGAFQKYRIIT------AVSATGVIITAAYCLWTIQRIFLGKLN-EKYavfp 444
Cdd:PRK12645 389 LIGALSMAGLPPFNGFLSkemffESMLNATEANLFSLDTwgvlfpVIAWVASVFTFVYSIIFIFKTFFGKYKpEQL---- 464
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1278113921 445 DINARE-----FISLLPLGILVIVLGIYPHpILA--LMKPTVRFINN 484
Cdd:PRK12645 465 PKKAHEapigmLISPIILASLVVVFGLFPN-ILTnsIIEPAVSAILP 510
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
71-472 |
1.14e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 121.21 E-value: 1.14e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 71 QAFNIELFLGVDGLSM---PMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLET-GMIGVFCALDFFLFFISWEVMLLP 146
Cdd:TIGR01770 58 YLFTGFSFFIVDNFALlikLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALlGIFLLVSSNDLLSIYLGLELQSLC 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 147 MYFLIGVWGGPDREY-AAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDmTRLAQLGAGMEFKTLCW---IVLFIGFAIK 222
Cdd:TIGR01770 138 FYVLAGLKRKSRFSTeAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFE-DLLLFLSNGMLNISLLLlgiVLILVGLLFK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 223 VPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRL 302
Cdd:TIGR01770 217 LSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 303 VAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHR--RIDGFGGIASVAPNYAVISFLAF 380
Cdd:TIGR01770 297 LAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWieYISDFAGLFKTNPILAILILIFM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 381 FAALGLPGLNSFISEALVLLGAFQKYRIITAVSA-TGVIITAAYCLWTIQRIFLGKlNEKYAVFPDINAREFISLLPLGI 459
Cdd:TIGR01770 377 FSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAvLTSVIGAFYYLRVVKVMYFDK-PERRIPSNPQSKAQSLLLSISAL 455
|
410
....*....|...
gi 1278113921 460 LVIVLGIYPHPIL 472
Cdd:TIGR01770 456 FILFLGLFPSLIL 468
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
3-404 |
1.45e-29 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 121.93 E-value: 1.45e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 3 TLIIFIP-----VIGGLIILFLPERhnLIRWSSLIITLIPFTLSIMLYAGFdrsvsgfsypgglqfverYSWIQAFNIEL 77
Cdd:PRK12668 1 MMLDFLPpalvfIAGALLVPFLPGR--ARKALLLLAPVLAVLAVLTVPEGT------------------YLTVTFLGFDL 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 78 FLG-VDGLSMPMALLCTMLCPLCVLASWGIDKgiKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGG 156
Cdd:PRK12668 61 VLGrVDKLSRVFGLIFGIMAFIGVIYALHVKD--PGQHVAALLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGT 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 157 PDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQLGAgmefktLCWIVLFIGFAIKVPVFPFHTWLPDAH 236
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAET--GSFAFGAIAGLGG------TAAWLILIGFGVNAAFPPLHAWLPDAY 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 237 VEAPTAISVILAGVLLKMGTYGMLRvnymMFPDVtfkmsMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLL 316
Cdd:PRK12668 211 PEATVTGSVFLSAFTTKTAVYALAR----AFPGT-----ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVA 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 317 GMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEA 396
Cdd:PRK12668 282 GIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKS 361
|
....*...
gi 1278113921 397 LVLLGAFQ 404
Cdd:PRK12668 362 MIISAAGE 369
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-479 |
1.04e-28 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 120.32 E-value: 1.04e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 67 YSWIQAFNIELFLGVDGLSMPMALLCTMLCPLCVLASWGI---DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVM 143
Cdd:PRK12649 64 ISWLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYmshKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELT 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 144 LLPMYFLIGVW-GGPDREYAAIKFYIYTLIGSLMMLlvIIYMYLSATPHTFDMTRLAQLGA------GMEFKTLCWIVLF 216
Cdd:PRK12649 144 SITSFMLIGYWrHRPESVYGATKSLLITAGGGLFMF--AGFLLLHVITGTYDIATILQDSElienikGHPLFLITLILIF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 217 IGFAIKVPVFPFHTWLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRVNymmfPDVTFKMSMFIAV--LGMINIIYGAFCA 293
Cdd:PRK12649 222 IGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIH----PIFSGTEAWFILVsgTGMITMVLAGFLA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 294 MAQKDLKRLVAYSSISHMGYV--LLGMASLTEEGLN--GAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVA 369
Cdd:PRK12649 297 FRQTDIKAILAYSTISQLAYLmtMYGYTTYHEPGLGvaAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 370 PNYAVISFLAFFAALGLPGLNSFIS-----EALVLLGA---FQKYRIITAVSATGVIITAAYCLWTIQRIFLGKlNEKYA 441
Cdd:PRK12649 377 PITFIVASIAALAMAGIPPLNGFLSkemfyETSVEMGAligGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGE-RTHDH 455
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1278113921 442 VFPDINAREFISLLP---LGILVIVLGIYPH-PILALMKPTV 479
Cdd:PRK12649 456 LPHHIHEAPYVMLIPaafLAGLVILFGLVPSiPIHNIIEPAT 497
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-471 |
1.11e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 115.60 E-value: 1.11e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 4 LIIFIPVIGGlIILFLPERHNLIRWSSLIITLIPFTLSIMLYAGfdrsvsgfSYPGGLQFVERYSWIQAFNIELflGVDG 83
Cdd:PRK12662 8 LQVIIPLLSA-VVCALLKNRKLVKIISCIVVAVSFFIALVLFVQ--------VYSGGVIKYSLGGWGPPYGIEL--RVDI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 84 LSMPMALLCTMLCPLCVLASWGIDKG------IKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGP 157
Cdd:PRK12662 77 LSATMLVLVNFIAVMSVLYGIYPNRKeisvnkIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDK 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 158 DREYAAIKFYIYTLIGSLMMLLVIIYMY-LSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAH 236
Cdd:PRK12662 157 KALVAAFEYLIIGTIGATFYLIGIGFLYaITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAY 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 237 VEAPTAISVILAGVLLKMGTYGMLRVNYMMFPD----VTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMG 312
Cdd:PRK12662 237 SEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKAnfvfTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 313 YVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSF 392
Cdd:PRK12662 317 YIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 393 ISEALVLLGAFQ-KYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPL---GILVIVLGIYP 468
Cdd:PRK12662 397 VAKWYILDAFIKsNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKANDKAFKTPNAMVLCIwimAILSIIVGIYP 476
|
...
gi 1278113921 469 HPI 471
Cdd:PRK12662 477 IPL 479
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
118-435 |
2.97e-27 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 113.08 E-value: 2.97e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 118 LLLETGMIGVFCALDFF-----LFFISWEVMLLPMYFLIGVWG-GPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPH 191
Cdd:MTH00094 64 LLILSNLLILICLLFFVssnmlMLYMFFELSMFPILIMILGYGsQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLC 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 192 TFDMTrlaqlgagmeFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRV-NYMMFpdV 270
Cdd:MTH00094 144 YFDFF----------LSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRIlGSLNF--V 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 271 TFKMSMFIAVLGMiniIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVI 350
Cdd:MTH00094 212 YNNFWIIFSLLGM---ILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEF 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 351 YDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQKYRIITAVSATGVIITAAYCLWTIQR 430
Cdd:MTH00094 289 YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVS 368
|
....*
gi 1278113921 431 IFLGK 435
Cdd:MTH00094 369 SFMGK 373
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
4-487 |
4.36e-27 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 115.24 E-value: 4.36e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 4 LIIFIPVIGgLIILFLPERHNLIRWSSLIITLIPFTLSIMLYAGFDRSVSGfsypgglQFVE-RYSWIQAFNIELFLGVD 82
Cdd:PRK12646 6 LLIAILVIM-AMILLTSKRRALAKYAGYIALVAPIISSIYFLIQIPSVAKL-------QYLStSIPWMKTLDINLDLRLD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 83 GLSMPMALLCTMLCPLCVL-ASWGIDKG---IKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVW-GGP 157
Cdd:PRK12646 78 GLSLMFSLIISLIGIAVFFyATQYLSSRkdnLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWyNNG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 158 DREYAAIKFYIYTLIGSLMMLLVIIYMY-LSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAh 236
Cdd:PRK12646 158 DSQFGAIQSFMITVFGGLALLVGFIMLYiMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA- 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 237 VEAPTAISVIL-AGVLLKMGTYGMLRvnymmFPDVTFKMSMFIAVL---GMINIIYGAFCAMAQKDLKRLVAYSSISHMG 312
Cdd:PRK12646 237 MAAPTPVSAYLhSATMVKAGIFLLFR-----FTPLLGLSNMYIYIVtfvGLITMLFGSITALKQWDLKGILAYSTISQLG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 313 YVL----LG----------MASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFL 378
Cdd:PRK12646 312 MIMamvgIGggyaqhqqdaIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTI 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 379 AFFAALGLPGLNSFIS-----EALVLLGAFQKYR-----IITAVSATGVIITAAYCLWTIQRIFLGKLNEKyaVFPDINA 448
Cdd:PRK12646 392 AALSMAGVPFLNGFLSkemflDALTQTGQLSQFSlismiIIVFIGVIASIFTFTYALYMVKEVFWGKYDSK--VFTKKNI 469
|
490 500 510
....*....|....*....|....*....|....*....
gi 1278113921 449 REfisllPLGILVivlgiyPHPILALMKPTVRFINNLIT 487
Cdd:PRK12646 470 HE-----PWLFSL------PSLILMVLVPVIFFVPNIFG 497
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
108-400 |
6.37e-27 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 113.31 E-value: 6.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 108 KGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKfYIYTLIGSLMMLLVIIYMYLS 187
Cdd:PRK08676 99 ENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALK-YIFIASTAMIFAFIGLIFLFS 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 188 AT-----PHTFDMTRLAQLGAGME--FKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGML 260
Cdd:PRK08676 178 LTrqalgTGTLNWTELAAHASLLSpsVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGIL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 261 RVNYMMFPDVTF-KMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVV 339
Cdd:PRK08676 258 RLSALLRQSGAAeQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1278113921 340 AAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLL 400
Cdd:PRK08676 338 KSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILL 398
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
65-439 |
1.70e-26 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 113.48 E-value: 1.70e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 65 ERYSWIQAFNIELFLGVDGLSMPMALLCTMLCPLCVLASWGIDKGIK--GYFFLFLLL-ETGMIGVFCALDFFLFFISWE 141
Cdd:PRK12647 46 GGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPdlGRFYSYILLfMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 142 VMLLPMYFLIGV-WGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAtpHTFDMTRLAQLGAGM---EFKTLCWIVLFI 217
Cdd:PRK12647 126 LTSITSFLLIGFnHEREAARRAALQALLVTGGGGLALLAGLILLGNVT--GTYSLSELLASGDVIrehPLYLAILLLVLG 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 218 GFAIKVPVFPFHTWLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAvlGMINIIYGAFCAMAQ 296
Cdd:PRK12647 204 GAFTKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLGGTPLWQTILPLF--GGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 297 KDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVIS 376
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAA 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1278113921 377 FLAFFAALGLPGLNSFISEALV---LLGAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEK 439
Cdd:PRK12647 361 LLAALSMAGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVLGNALMVAVAFLVGIKPFLGKLVET 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-442 |
1.88e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 109.14 E-value: 1.88e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 91 LCTMLCPLCVLASWGIDKGIKgyfFLFLLLETGMIGVFCAL--DFFLFFISWEVMLLPMYFLIGvWGGPDREYAAIKFYI 168
Cdd:PRK06589 97 ICALLYTPKYLAINNIDSSSR---FLFFFNLTILIGVLIALssDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYL 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 169 YTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMEFKTLcwiVLFIGFAIKVPVFPFHTWLPDAHVeAPTAISVILA 248
Cdd:PRK06589 173 KILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILL---LMFIYGIAKTAIFPVHSWLPAAMV-AHYPVSALLH 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 249 GVLL-KMGTYGMLRVNYMMF----PDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLTE 323
Cdd:PRK06589 249 AVIVvKTGLFCIYKILLYIFglsyLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTP 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 324 EGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAF 403
Cdd:PRK06589 329 KALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAAS 408
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1278113921 404 QKYRIITAVSATGV-----IITAAYCLWTIQRIFLGKLNEKYAV 442
Cdd:PRK06589 409 EQNQPWLSIIVMLVviassILSALYLLKILSSIYKPSLSENSFI 452
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-423 |
3.49e-25 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 109.09 E-value: 3.49e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPeRHNLIRWSSLIITL---IPFTLSIMLYAGFdrsvsgFSYPGGLQFVERYSWIQA--FNI 75
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFG-RRIGEKWAHLVGTGlvgLSALLSLVVFFDF------LLGGGRAFSQTLWTWISVgdFDV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 76 ELFLGVDGLSMPMALLCTMLCPLCVLASWGIDKGIKGY--FFLFLLLET-GMIGVFCALDFFLFFISWEVMLLPMYFLIG 152
Cdd:PRK06590 77 DFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYrrFFAYLNLFTfSMLMLVLSDNLLQLFFGWEGVGLCSYLLIG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 153 VW-GGPDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMT---RLAQLGAGMEFKTLCWIV--LFIGFAIKVPVF 226
Cdd:PRK06590 157 FWyKKPSAGAAAMKAFIVNRVGDVGLALGIFLLF--AEFGSLNYDevfAAAPQFFGLGWSALTLICllLFIGAMGKSAQF 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 227 PFHTWLPDAhVEAPTAIS-VILAGVLLKMGTYGMLRVNYM--MFPDVtfkmSMFIAVLGMINIIYGAFCAMAQKDLKRLV 303
Cdd:PRK06590 235 PLHTWLPDA-MEGPTPVSaLIHAATMVTAGVYLVARMSPLfeLSPEA----LLFVAIVGAVTALFAAFIGLVQTDIKRVL 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 304 AYSSISHMGYVLLGMASlteEGLNGAVLQMFNHGVVAAMLFLLVG-VIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFA 382
Cdd:PRK06590 310 AYSTMSQLGYMFLALGV---GAYAAAIFHLMTHAFFKALLFLGAGsVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLA 386
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1278113921 383 ALGLPGLNSFISEALVLLGAFQKYRIITAVSA-TGVIITAAY 423
Cdd:PRK06590 387 LIGIPPFAGFFSKDEILEAAFANGHINLFVAGlVGAFLTAFY 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
192-432 |
5.88e-23 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 102.21 E-value: 5.88e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 192 TFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNyMMFPDVT 271
Cdd:PRK08042 163 TLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS-LLGGNAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 272 FKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMAS-----------LTEEGLNGAVLQMFNHGVVA 340
Cdd:PRK08042 242 LWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAgvtgialeqpaLIALGLVGGLYHLLNHSLFK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 341 AMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSF-----ISEALVLLGAFQKY--RIITAVS 413
Cdd:PRK08042 322 SVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFagewvIYQSFFKLSNSGAFvaRLLGPLL 401
|
250
....*....|....*....
gi 1278113921 414 ATGVIITAAYCLWTIQRIF 432
Cdd:PRK08042 402 AVGLAITGALAVMCMAKVY 420
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
67-434 |
3.20e-22 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 100.50 E-value: 3.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 67 YSWIQAF-----NIELFLGVDGLSMPMALLCTMLCPLCVLAS---WGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFI 138
Cdd:PRK12650 58 VTWIPDLlgngvDVNLALRADALSLFFALLALVIGAVVFIYSaryLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 139 SWEVMLLPMYFLIGVwGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIG 218
Cdd:PRK12650 138 AWELVSLASFFLIAR-SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 219 FAI-KVPVFPFHTWLPDAHVeAPTAISVIL-AGVLLKMGTYGMLRVNYMMFPDVTFkmSMFIAVLGMINIIYGAFCAMAQ 296
Cdd:PRK12650 217 AAFtKSAQFPFHFWLPEAMA-AITPVSAFLhAAAVVKAGIYLLLRFSPVFHDVAVW--NWLLIIVGMITALMGAVFAVQK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 297 KDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVIS 376
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1278113921 377 FLAFFAALGLPGLNSFISEAlVLLGAFQKYRI-------ITAVSATGVIITAAYCLwtiqRIFLG 434
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKE-GMLTAFLEAPGgnagvvlLLVGAALGAVFTFAYSA----RLVLG 433
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-404 |
2.34e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 96.84 E-value: 2.34e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 6 IFIPVIGGLIILFLPERH-NLIRWSSLIITLIPFTLSIMLYAGFDRSVSGFSYPGGlqfverysWIQAFNIELFLgvDGL 84
Cdd:PRK12666 12 ILLPLLTAALLLLLDERRrRLKRAISLASTLLLLAVAVALLASAAAGGIGVYLLGN--------WPAPFGIVLVL--DRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 85 SMPMALLCTMLCPLCVL-ASWGIDKgiKGYFF--LFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREY 161
Cdd:PRK12666 82 SALMLLLTALLALAALLyALAGWDR--AGPHFhaLFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLHGSGRARVR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 162 AAIKFYIYTLIGSLMML--LVIIYmylsATPHTFDMTRLAQLGAGME------FKTLCwIVLFIGFAIKVPVFPFHTWLP 233
Cdd:PRK12666 160 AGLHYVAINLVASSLFLigVGLIY----GVTGTLNMADLAQRIAQLPaadralLEAGA-ALLLVVFLIKAAMWPLNFWLP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 234 DAHVEAPTAISVILAgVLLKMGTYGMLRVNYMMFPDVTFKMSMFIA----VLGMINIIYGAFCAMAQKDLKRLVAYSSIS 309
Cdd:PRK12666 235 PAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEAGASAGFGQdwllPGGLATLAFGAIGVLAAQRLRRLAAYLVLV 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 310 HMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVI-------------YDRAHHRRIDGFGGIASVAPNYAVIS 376
Cdd:PRK12666 314 SSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADLVerqrgaaadrlavTPELYDLDEEEEEEVGVAIPATMALL 393
|
410 420 430
....*....|....*....|....*....|..
gi 1278113921 377 FLAFFAA----LGLPGLNSFISEALVLLGAFQ 404
Cdd:PRK12666 394 GLLFFICalalAGLPPLSGFLGKFALLQALLN 425
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-462 |
2.56e-21 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 97.07 E-value: 2.56e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIG----GLIILFLPERHNLIRWSSLIItlIPFTLSIMLyagFDRSVSGFSYpgglQFVERYSWIQAFNIE 76
Cdd:MTH00020 1 MYLLVLFLPLLGallsGLFGRKIGEKGAGILTSSCLI--ISLSWSFLI---FYEILFNSST----TYIKLWRWLDSDLLT 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 77 LFLGV--DGLSMPMALLCTMLCPLCVLASWGIDKG------IKGYFFLFLLLetgMIGVFCALDFFLFFISWEVMLLPMY 148
Cdd:MTH00020 72 VYFGLqfDGLVAIMLLVVTTVSTLVHIFSTAYMRGdphiprFMSYLSLFTFL---MVVLVTSDNYLQLFIGWEGVGLCSY 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 149 FLIGVW-GGPDREYAAIKFYIYTLIGSLMMLLVIIYMYlsATPHTFDMTRLAQLGAGMEFKTLCWI--VLFIGFAIKVPV 225
Cdd:MTH00020 149 LLINFWlTRIEANKAAIKAMLVNRVGDIGLLLAMFLLW--DRFGSLDFSSVFNMVVSAPSSDITLIclFLFIGAVGKSAQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 226 FPFHTWLPDAhVEAPTAIS-VILAGVLLKMGTYGMLRVNYMMfpDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVA 304
Cdd:MTH00020 227 LGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPLF--EQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 305 YSSISHMGYVLLGMaslteeGLNGAVLQMF---NHGVVAAMLFLLVG-VIYDRAHHRRIDGFGGIASVAPNYAVISFLAF 380
Cdd:MTH00020 304 YSTCSQLGYMVVAC------GLSHYSISLFhlmNHAFFKALLFLSAGsVIHALSDEQDMRKMGGLISFLPLTYIFFLIGS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 381 FAALGLPGLNSFISEALVLLGAFQKYRIITA--VSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLG 458
Cdd:MTH00020 378 LSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLG 457
|
....
gi 1278113921 459 ILVI 462
Cdd:MTH00020 458 ILAL 461
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-434 |
1.95e-20 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 94.87 E-value: 1.95e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPER-HNLIRWSSLIITLIPFTLSIMLYAgfdrSVSGfsypgGLQFVERYSWIQAFNIELFL 79
Cdd:PRK12648 2 SLLLLVLLPFLGALLAALLPRNaRNAEAWLAGLVALAALVLLALLYP----AVAA-----GEVIRAEIEWLPALGLNLSL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 80 GVDGLSMPMALLCTMLCPLCVL-ASWGIDKGIK-GYFFLFLLLETG-MIGVFCALDFFLFFISWEVMLLPMYFLIGVWG- 155
Cdd:PRK12648 73 RLDGLAWLFALLILGIGLLVVLyARYYLSPADPvPRFFSFLLLFMGaMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHh 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 156 GPDREYAAIKFYIYTLIGSLMML---LVIIYMYLSatphtFDMTRLaqLGAGMEFK-------TLCWIVLfiGFAIKVPV 225
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLagvLLLGHIVGS-----YDLDVV--LAAGDLIRahplyppALVLILL--GAFTKSAQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 226 FPFHTWLPDAhVEAPTAISVIL-------AGVLLkmgtygMLRvnymMFP-----DVTFkmsMFIAVLGMINIIYGAFCA 293
Cdd:PRK12648 224 FPFHFWLPHA-MAAPTPVSAYLhsatmvkAGVFL------LAR----LWPvlagtEEWF---WIVGGAGLITLLLGAYFA 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 294 MAQKDLKRLVAYSSISHMGYV--LLGMAslTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPN 371
Cdd:PRK12648 290 LFQHDLKGLLAYSTISHLGLItlLLGLG--SPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPI 367
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1278113921 372 YAVISFLAFFAALGLPGLNSFIS-----EALVLLGAFQKYRIITAVSAT-GVIITAAYCLWTIQRIFLG 434
Cdd:PRK12648 368 TATLAMVAAAAMAGVPLLNGFLSkemffAETLDTHLLGSLDWLLPVAATlAGAFSVAYSLRFIHDVFFG 436
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
69-423 |
9.15e-19 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 89.31 E-value: 9.15e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 69 WIQAFNIELFLG--VDGLSMPMALLCTMLCPLCVLASWGIDKGIKGY--FFLFL-LLETGMIGVFCALDFFLFFISWEVM 143
Cdd:PRK07376 75 WASAGDFHLPMGyvIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYvrFFAYLsLFSSSMLGLVISPNLVQIYVFWELV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 144 LLPMYFLIGVWGgpDRE---YAAIKFYIYTLIGSLMMLLVIIYMYlSATpHTFDMT----RLAQLGAGMEFK----TLCW 212
Cdd:PRK07376 155 GMCSYLLVGFWY--DRKgaaDAAQKAFVVNRVGDFGLLLGILGLF-WAT-GSFDFDgiadRLSELVSSGAVSgwlaLLLC 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 213 IVLFIGFAIKVPVFPFHTWLPDAhVEAPTAIS-VILAGVLLKMGTYGMLRVnYMMFPDVTFKMSmFIAVLGMINIIYGAF 291
Cdd:PRK07376 231 ILVFLGPMAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVARM-YPVFEQFPAVMT-VIAWTGAITAFLGAS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 292 CAMAQKDLKRLVAYSSISHMGYVLLGMaslteeGLNGAVLQMFN---HGVVAAMLFL-----------LVGVIYDRAHHR 357
Cdd:PRK07376 308 IALTQNDIKKGLAYSTISQLGYMVMAM------GCGAYSAGLFHlmtHAYFKAMLFLgsgsvihgmeeVVGHDPVLAQDM 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1278113921 358 RIdgFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQKYRIITAVSATGVIITAAY 423
Cdd:PRK07376 382 RL--MGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFY 445
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-477 |
2.29e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 88.44 E-value: 2.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 64 VERYSWIQAFNIELFLGVDGLSMPMALLCTMLCPLCVLASWGI----DKGIKGYFFLFLLLETGMIGVFCALDFFLFFIS 139
Cdd:PRK12644 55 TEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYfdddEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 140 WEVMLLPMYFLIGVWGgpDR---EYAAIKFYIYTLIGSLMMLLVIIYmyLSATPHTFDMTRLAQLGAGMEFKTLCWIVLF 216
Cdd:PRK12644 135 WELTTVLSFLLIGHYA--ERaasRRAALQALLVTTAGGLAMLVGIII--LGQAAGTYRLSELLADPPTGPAVSVAVVLIL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 217 IGFAIKVPVFPFHTWLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRVNyMMFPDVTFKMSMFIaVLGMINIIYGAFCAMA 295
Cdd:PRK12644 211 VGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA-PGFADVPVWRPTVL-VLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 296 QKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVI 375
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVV 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 376 SFLAFFAALGLPGLNSFIS-----EALVLLGAFQKYRIIT-AVSATGVIITAAYCLwtiqRIFLGKLNEKYAVFPDINAR 449
Cdd:PRK12644 368 AALAAASMAGLPPLLGFVAkeaalEAVLHDGALGPAGPVVlAGIVLGSILTVAYSL----RFLWGAFARKPGAFPSVAVT 443
|
410 420 430
....*....|....*....|....*....|....*.
gi 1278113921 450 EF-----ISLLP---LGILVIVLGIYPHPILALMKP 477
Cdd:PRK12644 444 EMhrpspLFLAPpavLAVLGLVLGLLPAPLDALLAP 479
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
64-399 |
3.16e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 87.71 E-value: 3.16e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 64 VERYSWIQA--FNIELFLGVDGLSMPMALLCTMLCPLCVL--ASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFL-FFI 138
Cdd:MTH00032 59 IELYKWIESeiFITHIGLLYDTLSVTMLLVISSISTLVHIysTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLqLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 139 SWEVMLLPMYFLIGVWGGP-DREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAGMEFK--------- 208
Cdd:MTH00032 139 GWEGVGVCSYLLVAFWTTRiQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMDRgyygggaye 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 209 ------TLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRvNYMMFPDVTFKMsMFIAVL 281
Cdd:MTH00032 219 splapfAIIGILLLIGCIGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLMIR-SFPLFEKAPLTL-LIITIF 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 282 GMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMAslTEEGLNGAVLQMFNHGVVAAMLFLLVGVI-----YDRAHH 356
Cdd:MTH00032 296 GALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIG--IEGSHNVGLFHLVNHAFFKALLFLSAGSVihsttVDEQDM 373
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1278113921 357 RRIdgfGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVL 399
Cdd:MTH00032 374 RKM---GGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
82-399 |
7.24e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 85.36 E-value: 7.24e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 82 DGLSMPMALLCTMLCpLCVLASWGIDKGIKGYFFLFLLLETGMIgVFCALDFFLFFISWEVMLLPMYFLIgVWGGP--DR 159
Cdd:MTH00062 44 DSLSFYLILLVLFLG-LYSQVMFYNLLSGVSRFFLFLSLIFSIL-CFCVNNSLLFWFFYELSIIPLLYLL-FSESPysER 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 160 EYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDMtrlaqLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEA 239
Cdd:MTH00062 121 YLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSD-----WGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEA 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 240 PTAISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYgafcAMAQKDLKRLVAYSSISHMGYVLLGMA 319
Cdd:MTH00062 196 SSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLIT----ACSELDGKRWLAFLSLSHILVPVLGLF 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 320 SLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVL 399
Cdd:MTH00062 272 VGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV 351
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
59-462 |
4.00e-14 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 74.66 E-value: 4.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 59 GGLQFVERYSWIQA--FNIELFLGVDGLSMPMALLCTMLCPLCVLASWGIDKG------IKGYFFLFLLLetgMIGVFCA 130
Cdd:MTH00210 54 GSATYIKLWRWFDSelLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGdphiprFMSYLSLFTFL---MIVLVTS 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 131 LDFFLFFISWEVMLLPMYFLIGVWGGPDR-EYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFD-MTRLAQLGAGMEFK 208
Cdd:MTH00210 131 DNYVQLFIGWEGVGLCSYLLINFWLTRIKaNKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFStISSLLVTNINKESL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 209 TLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAIS-VILAGVLLKMGTYGMLRVNYMMfpDVTFKMSMFIAVLGMINII 287
Cdd:MTH00210 211 TIICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLIIRSGPLF--EGSPLALTIVTILGALTAF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 288 YGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASLteeGLNGAVLQMFNHGVVAAMLFLLVG-VIYDRAHHRRIDGFGGIA 366
Cdd:MTH00210 288 FAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS---NYSTSLFHLMNHAFFKALLFLSAGsVIHAVSDEQDMRKMGGLI 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 367 SVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQKYRIITA--VSATGVIITAAYCLWTIQRIFLGKLNEKYAVFP 444
Cdd:MTH00210 365 KSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAywLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFI 444
|
410
....*....|....*...
gi 1278113921 445 DINAREFISLLPLGILVI 462
Cdd:MTH00210 445 GVHESSWNITFPLLLLAF 462
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
1-468 |
7.48e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 73.53 E-value: 7.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIRWSSLIITLIPFTLSIMlyAGFdrsvsgfsypgGLQFVERYSWIQAFNIELFLG 80
Cdd:PRK06277 3 LLPLMVVFPMICAIIFNLLHGKDKLIKYLTFIVAILLPILPFL--ASY-----------GYYYFGGHGLVNGYHSGITYL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 81 VDGLSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDRE 160
Cdd:PRK06277 70 FNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 161 YAAIKFYIYTLIGSLMMLLVI-IYMYLSATPHTFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEA 239
Cdd:PRK06277 150 KAALKYMILGNVAGSILLLGIgFLLASTGTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 240 PTAISVILAGvLLKMGTYGMLRVNYMMFPDVTFKMS-----MFIAVLGMIniiYGAFCAMAQKDLKRLVAYSSISHMGYV 314
Cdd:PRK06277 230 KPFGSALLQT-FSKFVLVALMLVIFKLFGGLSYFPSaqgvlIALSVLAMV---FGVVMALLQTDYKRLLAYHAISQGGYV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 315 LLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFIS 394
Cdd:PRK06277 306 AAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQS 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 395 EALVLLGAFQKYRIITAVSATGV-IITAAYCLWTIQRIFLGKLNE----------KYAVFpdinarefiSLLPLGILVIV 463
Cdd:PRK06277 386 KLMLAQAAMQANMPELAIIMIIVsIGTFVSMMKAFYLIYLKPKPEeleyknkkvpKYAVF---------SLAVLTILCII 456
|
....*
gi 1278113921 464 LGIYP 468
Cdd:PRK06277 457 LGLFP 461
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
112-434 |
1.30e-13 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 73.06 E-value: 1.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 112 GYFFLFLLL-ETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMYLSAT 189
Cdd:MTH00211 110 NRFFKYLLLfLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGrSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLN 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 190 PHTFDmtrlaQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAISVIL-------AGVLLkmgtygMLRV 262
Cdd:MTH00211 190 SWEIS-----QLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSALLhsstmvvAGVFL------LIRL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 263 NYMMFPDVTFKMSMFiaVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGyvlLGMASLteeGLNG---AVLQMFNHGVV 339
Cdd:MTH00211 258 SPLFQNNQLILGAVL--LLGALTMLFGALCALTQNDIKKIVAFSTTSQLG---LMMVTL---GLNQpqlAFLHICTHAFF 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 340 AAMLFLLVGV-IYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQKYRIITAVSAT--G 416
Cdd:MTH00211 330 KAMLFMCSGSiIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTllA 409
|
330
....*....|....*...
gi 1278113921 417 VIITAAYCLWTIQRIFLG 434
Cdd:MTH00211 410 TSLTAAYSFRLIFLSLGG 427
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
207-320 |
3.65e-13 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 71.85 E-value: 3.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 207 FKTLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAIS-VILAGVLLKMGTYGMLRvnymMFP---DVTFKMSmFIAVLG 282
Cdd:CHL00025 225 FATLCAFLLFLGPVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFLVAR----LLPlfiVIPYIMN-LISLIG 298
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1278113921 283 MINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLL--GMAS 320
Cdd:CHL00025 299 IITALLGATLALAQKDIKRGLAYSTMSQLGYMMLalGIGS 338
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-350 |
1.16e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 69.94 E-value: 1.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTLIIFIPVIGGLIILFLPERHNLIRWS----------SLIITLIPftLSIMLYAGFDRSVSGFSypgglqfverysWI 70
Cdd:MTH00066 2 NLMLIFNSSMILSLLLLILPLLLPKSNNFhtnvktsvktAFFISLIP--LMIFINQGLESITTSFH------------WM 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 71 QAFNIELFLgvdglSMPMALLCTMLCPLCVLASWGI----------DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISW 140
Cdd:MTH00066 68 NIFNFNINS-----SFKFDQYSIIFLPIALFVTWSIlefaiwymhsDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGW 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 141 EVMLLPMYFLIGVW-GGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSatphtFDMTRLAQLGAGMEFKTLCWIVLFIGF 219
Cdd:MTH00066 143 EGVGIMSFLLIGWWhARADANTAALQAVLYNRVGDIGLILSMAWLAMN-----TNSWELQQIFLLNDNSTLPLLGLILAA 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 220 AIKVPVFPFHTWLPDAhVEAPTAISVIL-------AGVLLKMGTYGMLRVNYMMfpdvtfkMSMFIAvLGMINIIYGAFC 292
Cdd:MTH00066 218 AGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGIFLLIRFHPLLENNQTA-------LTICLC-LGALTTLFTAAC 288
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1278113921 293 AMAQKDLKRLVAYSSISHMGyvlLGMASLteeGLNGAVLQMF---NHGVVAAMLFLLVGVI 350
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLG---LMMVTI---GLNQPQLAFFhicTHAFFKAMLFLCSGSI 343
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
100-321 |
1.83e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 69.43 E-value: 1.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 100 VLASW---GIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGgpDREYAAIKFYIYTLIGSLM 176
Cdd:PRK06459 58 ILASLysiEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTK--KNKRPAFVFMAFGELSTVL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 177 MLLVIIYMYLSATPHTFDMTRlaqlgagmefKTLCWIVLFIGFAIKVPVFPFH--TWLPDAHVEAPTAISVILAGVLLKM 254
Cdd:PRK06459 136 ILAGFAWAFIISGTTNFSYLP----------SPVPLILASFGFIIKMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLM 205
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1278113921 255 GTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASL 321
Cdd:PRK06459 206 GVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLY 272
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-316 |
7.16e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 64.03 E-value: 7.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 113 YFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMY-LSATPH 191
Cdd:PRK06591 117 FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLsITGSLN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 192 TFDMTRLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGMLRVNYMMFPDVT 271
Cdd:PRK06591 197 MTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYET 276
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1278113921 272 FKMSM--FIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLL 316
Cdd:PRK06591 277 IKTAItnFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
213-437 |
9.32e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 63.51 E-value: 9.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 213 IVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAgVLLKMGTYGMLrvnymmfpdVTFKMS-MFIAVLGMINIIYGAF 291
Cdd:MTH00196 99 LLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSIL---------VSIGLNvNILLIGGLFSLFVGAI 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 292 CAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHrrIDGFGGIASVAPN 371
Cdd:MTH00196 169 GALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKNL--IIEFSGLSRRLPI 246
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1278113921 372 YAVISFLAFFAALGLPGLNSFISEALVLL-GAFQKYRIITAVSATGVIITAAYCLWTIQRIFLGKLN 437
Cdd:MTH00196 247 LAITLALTFLSIAGIPPLVGFLGKWLILLsGVVYQYYLIFLLAVFCSVIAGVYYVRIVKILFFQANS 313
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
218-348 |
2.37e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 62.76 E-value: 2.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 218 GFAIKVPVFPFHTWLPDAHVEAPTAISVIL------AGVLLKmgtygmLRVNYMMFPDVTFKMSMFIAVLGMINIIYGAF 291
Cdd:PRK02504 219 GIAFKISAVPFHQWTPDVYEGSPTPVVAFLsvgskaAGFALA------IRLLVTAFPSFDEQWKLLFTALAILSMVLGNV 292
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1278113921 292 CAMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMfnhgvvAAMLFLLVG 348
Cdd:PRK02504 293 VALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYL------LAYLFMNLG 343
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
213-432 |
3.58e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 61.96 E-value: 3.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 213 IVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAGVLlKMGTYGMLrvnyMMFPDVTfKMSMFIAVLgmiNIIYGAFC 292
Cdd:MTH00199 194 ILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVP-KIGVFSIL----VQIGPVT-NVVLICAVL---SIIYGAIG 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 293 AMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHhrRIDGFGGIASVAPNY 372
Cdd:MTH00199 265 ALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKG--LIVEVSGLSRKNPVI 342
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1278113921 373 AVISFLAFFAALGLPGLNSFISEALVLL-GAFQKYRIITAVSATGVIITAAYCLWTIQRIF 432
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLsGVSSGYYLICIIAVLSSVIAGVYYVRVVQIIY 403
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
114-437 |
6.64e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 61.53 E-value: 6.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 114 FFLFLLLETgmigvfCALDFFLFFISWEVMLLPMYFLIGVWGG-PDREYAAIKFYIYTLIGSLMMLLviiYMYLSATP-H 191
Cdd:MTH00208 147 FLLNMLILT------SSNNLFLLFIGWEGVGFLSFLLISWWTTrNDANSSALQAVIYNRIGDIGIIL---FLSLSLINfN 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 192 TFDMTRLAQLGAGMEFKTLCWIV-LFIGFAIKVPVFPFHTWLPDAhVEAPTAISVIL-------AGVLLkmgtygMLRVN 263
Cdd:MTH00208 218 SWNLNEILSLNNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGVFL------LIRTS 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 264 yMMFPDVTFKMSmFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGyvlLGMASLteeGLNGAVLQMFN---HGVVA 340
Cdd:MTH00208 291 -PLISNSPWFLS-LCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLG---LMVVAI---GLNQPNLALFHictHAFFK 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 341 AMLFLLVG-VIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQKYR----IITAVSAT 415
Cdd:MTH00208 363 AMLFLCSGsIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISnllsIILALIAT 442
|
330 340
....*....|....*....|..
gi 1278113921 416 gvIITAAYCLWTIQRIFLGKLN 437
Cdd:MTH00208 443 --LLTAVYSFRIIFFCFLNNPS 462
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
215-326 |
1.17e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 60.64 E-value: 1.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 215 LFIGFAI--KVPVFPFHTWLPDAHVEAPTAISVILAgVLLKMGTYGMLRVNYmmfpdVTFKMSMFIAVlgmINIIYGAFC 292
Cdd:MTH00198 303 LFITVAIlfKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVYILLTSLV-----ITSKLLLSVAI---ISLVVGAFG 373
|
90 100 110
....*....|....*....|....*....|....
gi 1278113921 293 AMAQKDLKRLVAYSSISHMGYVLLGMASLTEEGL 326
Cdd:MTH00198 374 ALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESL 407
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
115-318 |
5.57e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 58.09 E-value: 5.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 115 FLFLLLETGMIGVF--CALDFFLFFISWEVMLLPMYFLIGVWGGPDRE-YAAIKfyiYTLIG---SLMMLLVIIYMY-LS 187
Cdd:CHL00049 113 FLLFVLTATLGGMFlcGANDLITIFVALECLSLCSYLLSGYTKKDVRSnEATMK---YLLMGgasSSILVYGFSWLYgLS 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 188 ATPHTFDMTRLAQLGAGMEFKTLCWIVLF---IGFAIKVPVFPFHTWLPDAHVEAPTAISVILAgVLLKMGTYGML-RVN 263
Cdd:CHL00049 190 GGEIELQEIVNGLINTQMYNSPGISIALIfitVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAASALAtRIF 268
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1278113921 264 YMMFPDVTFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGM 318
Cdd:CHL00049 269 DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI 323
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-350 |
1.08e-08 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 57.48 E-value: 1.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 1 MLTL-IIFIPVIGGLIILFLPERHNLIRWS---SLIITLIPftLSIMLYAGFDRSVSGFSypggLQFveryswIQAFNIE 76
Cdd:MTH00004 10 LLTLlILLTPILLPLLSKNLKNSPTTIKTTvklAFLISLIP--LTLFLNSGTESITTNWP----WIF------TTTFNIP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 77 LFLGVDGLSM---PMALLCTmlcplcvlasWGI----------DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWE-- 141
Cdd:MTH00004 78 ISFKLDQYSLmflPIALFVT----------WSIlefstwymasDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEgv 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 142 -VMllpMYFLIGVWGG-PDREYAAIKFYIYTLIGSLMMLLVIiyMYLSATPHTFDMTrlaQLGAGMEFKTLCWIVLFIGF 219
Cdd:MTH00004 148 gIM---SFLLIGWWSGrAEANTAALQAIIYNRIGDIGLILSM--AWLAMTLNTWEIQ---QLFSPTQTPTLPLLGLILAA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 220 AIKVPVFPFHTWLPDAhVEAPTAISVIL-------AGVLLKMGTYGMLRVNYMMfpdvtfkMSMFIaVLGMINIIYGAFC 292
Cdd:MTH00004 220 TGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGIFLLIRTHPLLQNNQTA-------LTICL-CLGALTTLFAATC 290
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1278113921 293 AMAQKDLKRLVAYSSISHMGyvlLGMASLteeGLNG---AVLQMFNHGVVAAMLFLLVGVI 350
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLG---LMMVTI---GLNQpqlAFLHISTHAFFKAMLFLCSGSI 345
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
29-350 |
2.35e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 56.40 E-value: 2.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 29 SSLIITLIPFTLSImlYAGFDRSVSgfsypgglqfverySW----IQAFNIELFLGVDGLSM---PMALLCTmlcplcvl 101
Cdd:MTH00108 42 YAFIISLIPTMMFI--HSGQEMIIS--------------NWhwmtIQTLKLSLSFKLDYFSMifiPVALFVT-------- 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 102 asWGI----------DKGIKGYF-FLFLLLETGMIGVfCALDFFLFFISWEVMLLPMYFLIGVW-GGPDREYAAIKFYIY 169
Cdd:MTH00108 98 --WSImefsmwymhsDPNINRFFkYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWyGRTDANTAALQAILY 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 170 TLIGS----LMMLLVIIYMylsatpHTFDMTRLAQLGagMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAISV 245
Cdd:MTH00108 175 NRIGDigfiLAMAWFLLNL------NSWDLQQIFMLN--PNNSNLPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 246 IL-------AGVLLKMGTYGMLRVNYMMfpdvtfkMSMfIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGyvlLGM 318
Cdd:MTH00108 246 LLhsstmvvAGVFLLIRFHPLMENNKTI-------QTL-TLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG---LMM 314
|
330 340 350
....*....|....*....|....*....|....*
gi 1278113921 319 ASLteeGLNG---AVLQMFNHGVVAAMLFLLVGVI 350
Cdd:MTH00108 315 VTI---GINQphlAFLHICTHAFFKAMLFMCSGSI 346
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
172-425 |
2.59e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 53.11 E-value: 2.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 172 IGSLMMLLVIIYMYLSATPHTFDMTRLAQLGAgmefkTLCWIVLfIGFAIKVPVFPFHTWLPdAHVEAPTAISVIL-AGV 250
Cdd:MTH00209 144 VGDALLILSIAWMLMHGNWNIFYLNFNSNLGS-----VISVLIV-LAAMTKSAQIPFSAWLP-AAMAAPTPVSALVhSST 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 251 LLKMGTYGMLRVNYMMFPDVTFKMSMFIavLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGyvlLGMASLTEEGLNGAV 330
Cdd:MTH00209 217 LVTAGVYLLIRFFPSLFSSPFFSMSLLL--LGSLTTLMASMSANVESDLKKIIALSTLSQLG---LMMCSLGLNQPELAF 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 331 LQMFNHGVVAAMLFLLVG-VIYDRAHHRRIDGFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQ-KYRI 408
Cdd:MTH00209 292 FHLITHALFKALLFICAGnIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLEsNMPI 371
|
250
....*....|....*...
gi 1278113921 409 ITAV-SATGVIITAAYCL 425
Cdd:MTH00209 372 MTLIlMFLSTSLTAAYSM 389
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
162-467 |
2.85e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 52.20 E-value: 2.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 162 AAIKFYIYTLIGSLMMLLVIIYMYlsatphtfdmtrlaqlgaGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPT 241
Cdd:MTH00144 55 SVVKYFIIQSLGSSLLIFGSLIMY------------------NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSW 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 242 AISVILAGVLLKMGTYGMLRVNYMMFpdvtfkMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASl 321
Cdd:MTH00144 117 LSCFLLLTWQKVAPLFLLSNFLDLYW------LAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH- 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 322 teeGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHrriDGFGGIASVAPNYAVISFLAFFAalGLPGLNSFISEALVLLG 401
Cdd:MTH00144 190 ---GSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMK---DLGSLKPSYKTGLSIISLLLSLG--GLPPFLGFCSKLLVLIS 261
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1278113921 402 AF-QKYRIITAVSATGVIITAAYCLWTIQRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVLGIY 467
Cdd:MTH00144 262 SMeSSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLNLLGGLLFLLLYL 328
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
84-399 |
3.16e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 52.81 E-value: 3.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 84 LSMPMALLCTMLCPLCVLASWGIDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAA 163
Cdd:PRK12664 36 LDLVLFIVLSFSLALIFLYILPIKNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 164 IKfyiYTLIGSLMMLLVIIYMYLSATPHTFDmtrlaqlgagmefkTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAI 243
Cdd:PRK12664 116 IH---YACVHFFSGVLLLVGASGQAQNGQYT--------------GYCKLLFMLGLLINCACFPASSWVVDAYPAASNFG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 244 SVILAGVLLKMGTYGMLRVnymmfpdvtFKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLL--GMASL 321
Cdd:PRK12664 179 IIVLSLFTTKVAALVLLLF---------FSGEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIaiGFSGS 249
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1278113921 322 TEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVaPNYAVISFLAFFAALGLPGLNSFISEALVL 399
Cdd:PRK12664 250 SGVAIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFKM-SLEAMCCIIAILNMGAFPGTAGFVSKSLIT 326
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-350 |
1.32e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 50.99 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 114 FFLFLLL-ETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGG-PDREYAAIKFYIYTLIGSLMMLLVIIYMylsATP- 190
Cdd:MTH00137 121 FFKYLLIfLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGrADANTAALQAVIYNRVGDIGLILAMAWM---ATNl 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 191 HTFDMTRLAQLGAGMEFkTLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAISVIL-------AGVLLkmgtygMLRVN 263
Cdd:MTH00137 198 NSWEIQQIFALSKDFDL-TLPLLGLILAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRLS 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 264 YMMFPDvtfKMSMFIAV-LGMINIIYGAFCAMAQKDLKRLVAYSSISHMGyvlLGMASLteeGLNG---AVLQMFNHGVV 339
Cdd:MTH00137 270 PLMENN---QTALTTCLcLGALTTLFTATCALTQNDIKKIVAFSTSSQLG---LMMVTI---GLNQpqlAFLHICTHAFF 340
|
250
....*....|.
gi 1278113921 340 AAMLFLLVGVI 350
Cdd:MTH00137 341 KAMLFLCSGSI 351
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
212-399 |
8.76e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 48.22 E-value: 8.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 212 WIVLFIGFA--IKVPVFPFHTWLPdAHVEAPTAIS-------VILAGVLLKMGTYGMLRVNYMMFPDVtfkmsMFIAVLG 282
Cdd:MTH00207 180 YIALSIMIAamTKSAQMPFSSWLP-AAMAAPTPVSalvhsstLVTAGVFLLIRFYPFLSSTYWFNPAL-----LLTASLT 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 283 MIniiYGAFCAMAQKDLKRLVAYSSISHMGYVllgMASLTEEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRR-IDG 361
Cdd:MTH00207 254 ML---MAGLSAMTECDMKKIIALSTLSQLGVM---MASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQdLRT 327
|
170 180 190
....*....|....*....|....*....|....*...
gi 1278113921 362 FGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVL 399
Cdd:MTH00207 328 MGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLIL 365
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
107-353 |
1.51e-05 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 47.34 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 107 DKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGV---WGGPdREYAAIKFYIYtLIGSLMMLLVIIY 183
Cdd:PRK08601 99 DRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLnkgWKVA-REAAKISGMLF-LISWLALALAIVW 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 184 MYLS----ATPHTFDMTRLAQLGAGMEFKtlcwIVLFIGFAIKVPV--FPFHTWLPDAHVeAPTAISVILAGVLLKMGTY 257
Cdd:PRK08601 177 LFIAtgewQLTSVLSNENLAQLGTWEKTG----INLLLILAVMIPAaqWPFQRWLIESAV-APTPVSAIMHAGLVNAGGI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 258 GMLRVNYMMFPDVTfkmSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVL----LGMASlteeglnGAVLQM 333
Cdd:PRK08601 252 MLTRFSPLFHDDIA---QILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLvqcaLGAYS-------AAIIHL 321
|
250 260
....*....|....*....|
gi 1278113921 334 FNHGVVAAMLFLLVGVIYDR 353
Cdd:PRK08601 322 ILHGLFKATLFLQSGSAVPR 341
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
67-435 |
1.97e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 47.21 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 67 YSWIQAFNIELFLGVD--GLSMPMALLCTMLCPLCVLASWG---IDKGIKGYFFLFLLLETGMIGVFCALDFFLFFISWE 141
Cdd:PRK07390 71 FPWLQVADLDLSLSLEisPVTLGALELITGLSLLAQIYALGyleKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 142 VMLLPMYFLIGVW-GGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHTFDmtRLAQLGAGMEFK----TLCWIVLF 216
Cdd:PRK07390 151 ILTLSTYLLVGFWyAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFS--DLAAWAATANLDpltaTLLGLALI 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 217 IGFAIKVPVFPFHTWLPDAhVEAPTAISVILAGVLLKMGTYGMLRVN--YMMFPDVtfkmSMFIAVLGMINIIYGAFCAM 294
Cdd:PRK07390 229 AGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQpvLALSPVA----LTVLIVIGTVTAIGASLVAI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 295 AQKDLKRLVAYSSISHMGYVLLGMASlteEGLNGAVLQMFNHGVVAAMLFLLVGVIYDRAHHRRIDGFGGIASVAPnYAV 374
Cdd:PRK07390 304 AQIDIKRALSYSTSAYLGLVFIAVGL---QQPDIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMP-ATT 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1278113921 375 ISFLAFFAAL-GLPGLNSFISEALVLLGAFQKYRIITAV-----SATGVIITAAYCLwtiqrIFLGK 435
Cdd:PRK07390 380 LAFLVGSAGLvALLPLGGFWALLRLADGLWAVSPWLVGVlllvnALTAFNLTRVFRL-----VFLGK 441
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
115-318 |
3.51e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 45.73 E-value: 3.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 115 FLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSatphtfd 194
Cdd:MTH00200 8 LFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT------- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 195 mtrLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILaGVLLKMGTYGMLRVNYMMFPdvtfkm 274
Cdd:MTH00200 81 ---SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLIL-STWQKLAPFALLIQLAPALN------ 150
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1278113921 275 SMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGM 318
Cdd:MTH00200 151 SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL 194
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
201-465 |
4.07e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 45.99 E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 201 LGAGMEFKTLCWIVLFIGFA--IKVPVFPFHTWLPDAhVEAPTAIS-------VILAGVLLKMGTYGMLRVNYMmfpdvt 271
Cdd:MTH00151 166 ILSMWDFKLSGWLGLLLVLAamTKSAQIPFSSWLPAA-MAAPTPVSalvhsstLVTAGVFLLIRFFPFLSSSSG------ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 272 fkMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGY----VLLGMASLteeglngAVLQMFNHGVVAAMLFLLV 347
Cdd:MTH00151 239 --FSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVmmfsLGLGMPSL-------ALFHLYTHALFKALLFLCA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 348 GVI---YDRAHHRRIdgFGGIASVAPNYAVISFLAFFAALGLPGLNSFISEALVLLGAFQKYR--IITAVSATGVIITAA 422
Cdd:MTH00151 310 GSIihsSSGTQDIRL--LGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTslLMVLLMFVGVGLTAL 387
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1278113921 423 YCLwtiqRIFLGKLNEKYAVFPDINAREFISLLPLGILVIVLG 465
Cdd:MTH00151 388 YSA----RLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLG 426
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
114-316 |
8.74e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 44.66 E-value: 8.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 114 FFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSatphtf 193
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSN------ 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 194 dmtrlaqlgagMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAISVILAGVLLKMGTYGMLRVNYmmfpdvtfK 273
Cdd:MTH00197 75 -----------LYLSLLSVVLVILGLLLKLGAFPFHFWVPSV-MESLSWFNCFLLATWQKLAPLLILAFNS--------S 134
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1278113921 274 MSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLL 316
Cdd:MTH00197 135 SFMGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLM 177
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
113-350 |
2.59e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 43.37 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 113 YFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSATPHT 192
Cdd:MTH00095 78 FYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 193 fdmtrlaqlgAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRVNYMMFpdvT 271
Cdd:MTH00095 158 ----------SFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKA-MSAPTPVSSLVhSSTLVTAGLILLMNFSYLIL---N 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 272 FKMSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGMASlteeGLNG-AVLQMFNHGVVAAMLFLLVGVI 350
Cdd:MTH00095 224 MNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGS----GLSFvSFIHLLSHALFKSCLFMQVGYL 299
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
209-348 |
4.05e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 42.94 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 209 TLCWIVLFIGFAiKVPVFPFHTWLPDAhVEAPTAISVIL-AGVLLKMGTYGMLRVNYMMFPdvtFKMSMFIAVLGMINII 287
Cdd:MTH00063 158 LCCLFFFLIVFT-KSASFPFISWLLEA-MRAPTPVSSLVhSSTLVAAGVWFVMRYDYLLGF---SWLSIFFSVLLLLTIF 232
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1278113921 288 YGAFCAMAQKDLKRLVAYSSISHMGYVLLgMASLTEEGLngAVLQMFNHGVVAAMLFLLVG 348
Cdd:MTH00063 233 ITGVSSLFFSDLKKIVALSTCNNISWCVL-YLIYGDVIL--SLFQLVSHGVSKCLLFMLVG 290
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
162-315 |
1.70e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 40.58 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 162 AAIKFYIYTLIGSLMMLLVIIYMYLSATphTFDMTRLAQlgagmefKTLCwIVLFIGFAIKVPVFPFHTWLPDAHVEAPT 241
Cdd:MTH00112 55 AATKYFLTQAAASALILFSSTTNAWNTG--QWDITQLTN-------PTSC-TLLTLALAMKLGLAPFHFWLPEVLQGSTT 124
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1278113921 242 AISVILAgVLLKMGTYGMLrvnYMMFPDVTFKMSMFIAVLgmiNIIYGAFCAMAQKDLKRLVAYSSISHMGYVL 315
Cdd:MTH00112 125 TTALILS-TWQKLAPLTLL---LMTSNSLNPTLLLTLAIL---STLIGGWGGLNQTQLRKIMAFSSIAHLGWMI 191
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
113-318 |
1.70e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.58 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 113 YFFLFLLLETGMIGVFCALDFFLFFISWEVMLLPMYFLIGVWGGPDREYAAIKFYIYTLIGSLMMLLVIIYMYLSatpht 192
Cdd:MTH00160 7 KLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN----- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 193 fdmtrlaqlgaGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPDAhVEAPTAISVILAGVLLKMGTygMLRVNYMMFpdvtf 272
Cdd:MTH00160 82 -----------LMLFNNISSMLINSSLLLKLGAAPFHFWFPEV-MEGLSWINCFILMTWQKIAP--LILLSYLIN----- 142
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1278113921 273 kmSMFIAVLGMINIIYGAFCAMAQKDLKRLVAYSSISHMGYVLLGM 318
Cdd:MTH00160 143 --NNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSM 186
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
162-313 |
2.08e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 40.21 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 162 AAIKFYIYTLIGSLMMLLVIIYMYLSatphtfdmtrLAQLGAGMEFKTLCWIVLFIGFAIKVPVFPFHTWLPdahvEAPT 241
Cdd:MTH00105 55 AATKYFLTQATASMLLMMAIIINLMY----------SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVP----EVTQ 120
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1278113921 242 AISVILAGVLLKMGTYGMLRVNYMMFPDVTFKMSMFIAVLgmiNIIYGAFCAMAQKDLKRLVAYSSISHMGY 313
Cdd:MTH00105 121 GIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL---SILIGGWGGLNQTQLRKILAYSSIAHMGW 189
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
209-314 |
5.51e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.14 E-value: 5.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1278113921 209 TLCWIVLFIGFAIKVPVFPFHTWLPDAHVEAPTAISVILAgvllkmgTYGMLRVNYMMFPDVTFKMSMFIAVLGMINIIY 288
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIA-------TWQKIAPLILLISISNLLNSNILILCGILSVLV 164
|
90 100
....*....|....*....|....*.
gi 1278113921 289 GAFCAMAQKDLKRLVAYSSISHMGYV 314
Cdd:MTH00041 165 GGWGGLNQTQTRKILAFSSIAHLGWI 190
|
|
| |
