|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-570 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 575.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 2 MSIFYTVSMTFMMFSLFFFVLSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGD 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 82 DPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 162 FGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 242 GASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLL 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 322 DQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 402 VSDFNFSVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLV- 480
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYn 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 481 ---LNLNSLVFFLGSMWYVPVISVKVFSHPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTYTIM 557
Cdd:MTH00165 481 lksLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 1275874134 558 FMSMVLVILIGMF 570
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
9-571 |
5.49e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 481.26 E-value: 5.49e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 9 SMTFMMFSLFFFVLSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRF 88
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 89 VMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLNFGSWNYV 168
Cdd:MTH00151 88 MWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 169 YYYDYFFssfdYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS-GASFFM 247
Cdd:MTH00151 168 SMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSsGFSSFL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 248 LFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIR 327
Cdd:MTH00151 244 LFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 328 FMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNF 407
Cdd:MTH00151 324 LLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKS 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 408 SVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSLV 487
Cdd:MTH00151 404 SSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 488 FFLGSMWYVPVISVKVFSHPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKyyiFHYLYLFDYNFKTYTIMFMSMVLVILI 567
Cdd:MTH00151 484 FFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANK---SFSVLNESWPVKWFNFFIGLILLLVLF 560
|
....
gi 1275874134 568 GMFI 571
Cdd:MTH00151 561 LVVI 564
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
5-567 |
8.02e-152 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 447.56 E-value: 8.02e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 5 FYTVSMTFMMFSLFFFVLSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPF 84
Cdd:MTH00209 2 KKMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 85 KIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLNFGS 164
Cdd:MTH00209 82 KKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 165 WNYvyyydyFFSSFDYSI---ICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS 241
Cdd:MTH00209 162 WNI------FYLNFNSNLgsvISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 242 GA-SFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGL 320
Cdd:MTH00209 236 PFfSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSH 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 321 LDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYS 400
Cdd:MTH00209 316 GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFS 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 401 LVSDFNFSVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLV 480
Cdd:MTH00209 396 LWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFL 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 481 LNLNSLVFFLGSMWYVPVISVKVFSHPTLFSGYLYLKLLDYGWLELYGSQGIYDFMkYYIFHYLYLFDYNFKTYTIMFMS 560
Cdd:MTH00209 476 IKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVL-KKSSKLSQIIQNNSLKLFVTFMM 554
|
....*..
gi 1275874134 561 MVLVILI 567
Cdd:MTH00209 555 LILLGVI 561
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
1.03e-148 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 439.97 E-value: 1.03e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 1 MMSIFYTVSMTFMMFSLFFFVLSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMG 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 81 DDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 161 NFGSWNYVYYYDYFFSSFdysiICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIvN 240
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL-S 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 241 SGASF--FMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIH 318
Cdd:MTH00207 238 STYWFnpALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIH 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 319 GLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:MTH00207 318 SHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTL 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 399 YSLVSDFNFSVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNF 478
Cdd:MTH00207 398 AVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNI 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 479 ----LVLNLNSLVFFLGSMWYVPVISVKVFSHPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTY 554
Cdd:MTH00207 478 tktpLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNY 557
|
570
....*....|....*.
gi 1275874134 555 tIMFMSMVLVILIGMF 570
Cdd:MTH00207 558 -LMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
5.00e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 343.86 E-value: 5.00e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 1 MMSIFYTVSMTFMMFSLFFFVLSLYLLLF--DLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMY 78
Cdd:MTH00211 23 PLNNSKLHIKKAVKLSFFISLIPLLIFLDqgLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 79 MGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTAL-SNRVGDVLILISIS 157
Cdd:MTH00211 103 MSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 158 WML-NFGSWNYVyyyDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNP 236
Cdd:MTH00211 183 WLLlNLNSWEIS---QLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 237 MIVNSGASF-FMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGC 315
Cdd:MTH00211 260 LFQNNQLILgAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGS 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 316 YIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVR 395
Cdd:MTH00211 340 IIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFR 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 396 LFYYSLVSDFNFSVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFPV-PSCVYLPLSLKLLTMVVMMGGLYLGYLLS 474
Cdd:MTH00211 420 LIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELV 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 475 IMNFLVLNLNSLvFFLGSMWYVPVISVKVFSHPTL-FSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKT 553
Cdd:MTH00211 500 NLTHKQLKTSTL-SFSNMLGYYPPIIHRLLPKLSLkWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKS 578
|
570
....*....|....*...
gi 1275874134 554 Y-TIMFMSMVLVILIGMF 570
Cdd:MTH00211 579 YlALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
41-571 |
8.21e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 289.56 E-value: 8.21e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 41 SLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGL 120
Cdd:MTH00208 93 SNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGF 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 121 VSYCLVIYYQNVKSFNAGMLTA-LSNRVGDV--LILISISwMLNFGSWNYVYYYdyFFSSFDYSIICYLIMG---AAMTK 194
Cdd:MTH00208 173 LSFLLISWWTTRNDANSSALQAvIYNRIGDIgiILFLSLS-LINFNSWNLNEIL--SLNNSNSFLINILLFGillAAAGK 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 195 SAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIA 273
Cdd:MTH00208 250 SAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPwFLSLCLILGSLTALFAASTAISQHDIKKIIA 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 274 LSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGF 353
Cdd:MTH00208 330 YSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 354 PFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLRDFNNCGGDMHKGMTYLLILVIL 433
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTII 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 434 GGSLLSWLLFPVPSCVyLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSLVFFLGSMWYVPVISVKVFSHPTLF-SG 512
Cdd:MTH00208 490 SGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFtSL 568
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874134 513 YLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTYTIMFMSMVLVILIGMFI 571
Cdd:MTH00208 569 FGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLI 627
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-398 |
2.11e-87 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 282.43 E-value: 2.11e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 7 TVSMTFMMFSLFFFVLSLYLLLFDLSYMLEWevYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKI 86
Cdd:COG1009 34 AALAPLAAFVLSLLLFPAVLGGEVVVELYTW--IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 87 RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTA-LSNRVGDVLILISISWMLN-FGS 164
Cdd:COG1009 112 RFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGT 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 165 WNYVYYY---DYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS 241
Cdd:COG1009 192 LNFSELLaaaPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 242 -GASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGl 320
Cdd:COG1009 272 pVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA- 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874134 321 LDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILE-MCSMSEMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:COG1009 351 TGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-532 |
3.45e-84 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 273.96 E-value: 3.45e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 1 MMSIFYTVSMTFMMfSLFffVLSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMG 80
Cdd:MTH00004 33 PTTIKTTVKLAFLI-SLI--PLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 81 DDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTA-LSNRVGDVLILISISWM 159
Cdd:MTH00004 110 SDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 160 -LNFGSWNYvyyyDYFFSSFDYSIIcyLIMG---AAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFN 235
Cdd:MTH00004 190 aMTLNTWEI----QQLFSPTQTPTL--PLLGlilAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTH 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 236 PMIVNSGASFFM-LFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAG 314
Cdd:MTH00004 264 PLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSG 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 315 CYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSV 394
Cdd:MTH00004 344 SIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSL 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 395 RLFYYSLVSDFNFSVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFPV-PSCVYLPLSLKLLTMVVMMGGLYLGYLL 473
Cdd:MTH00004 424 RMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALEL 503
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1275874134 474 SIM--NFLVLNLNSLVFFLGSMWYVPVISVKVFSHPTLFSGY-LYLKLLDYGWLELYGSQGI 532
Cdd:MTH00004 504 SNMttTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQkIATHLIDLSWLEKMGPKGL 565
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-397 |
2.34e-82 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 269.72 E-value: 2.34e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 46 SIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCL 125
Cdd:PRK06590 75 DVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 126 V-IYYQNVKSFNAGMLTALSNRVGDVLILISISWML-NFGSWNYVYYYDYFFSSFDYS-----IICYLIMGAAMTKSAQL 198
Cdd:PRK06590 155 IgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQF 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 199 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS-GASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTL 277
Cdd:PRK06590 235 PLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSpEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTM 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 278 SQLGLMMsiLAMGFPVLSF--FHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPF 355
Cdd:PRK06590 315 SQLGYMF--LALGVGAYAAaiFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPP 392
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1275874134 356 LSGFYSKDLILEMcSMSEMNFLIYLMFFVSTGLTIMYSVRLF 397
Cdd:PRK06590 393 FAGFFSKDEILEA-AFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
34-567 |
2.47e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 266.39 E-value: 2.47e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 34 MLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILL 113
Cdd:MTH00066 61 TTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 114 GWDGLGLVSYCLV-IYYQNVKSFNAGMLTALSNRVGDVLILISISW-MLNFGSWNYvyyyDYFFSSFDYSIIcyLIMG-- 189
Cdd:MTH00066 141 GWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWEL----QQIFLLNDNSTL--PLLGli 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 190 -AAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFM-LFIGCLTMLMAGLVANFEFD 267
Cdd:MTH00066 215 lAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQND 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 268 LKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSN 347
Cdd:MTH00066 295 IKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGS 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 348 LGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLRDFNNCGGDMHKGMTYL 427
Cdd:MTH00066 375 LALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRL 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 428 LILVILGGSLLSWLLFPV-PSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSLVFFLGSMWYVPVISVKVFSH 506
Cdd:MTH00066 455 AWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMHSFSNLLAFFPTIIHRLSPK 534
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1275874134 507 PTLFSGY-LYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTY-TIMFMSMVLVILI 567
Cdd:MTH00066 535 TNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYlTLFLITLLLMLIL 597
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-520 |
3.03e-79 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 261.06 E-value: 3.03e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 37 WEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWD 116
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 117 GLGLVSYCLV-IYYQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNYVYYYDYFFSSFDY--SIICYLIMGAAM 192
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFQEVFALAPGAFFSalTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 193 TKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS-GASFFMLFIGCLTMLMAGLVANFEFDLKKV 271
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSpTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 272 IALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLC 351
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 352 GFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLRDFNNCGGDMHKGMTYLLILV 431
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 432 ILGGSLLSWLLFPVPSCVY-----------LPLSLKLLTMVVMMGGLYLGYLLSIMN-FLVLNLNSLVFFLGSM----WY 495
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLLYLGNpTLPAKIAQRHSGLYRLllnkWY 544
|
490 500
....*....|....*....|....*
gi 1275874134 496 VPVISVKVFSHPTLFSGYLYLKLLD 520
Cdd:TIGR01974 545 FDELYDKVFVKPYLFLGKLLWKDPD 569
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
37-532 |
1.21e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 245.92 E-value: 1.21e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 37 WEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWD 116
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 117 GLGLVSYCLVIYYQNVKSFNAGMLTA-LSNRVGDVLILISISW-MLNFGSWNYvyyYDYFFSSFDYSIICylIMG---AA 191
Cdd:MTH00108 146 GVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDL---QQIFMLNPNNSNLP--LMGlllAA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 192 MTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIV-NSGASFFMLFIGCLTMLMAGLVANFEFDLKK 270
Cdd:MTH00108 221 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEnNKTIQTLTLCLGAITTLFTAICALTQNDIKK 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 271 VIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGL 350
Cdd:MTH00108 301 IVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLAL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 351 CGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLRDFNNCGGDMHKGMTYLLIL 430
Cdd:MTH00108 381 TGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLG 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 431 VILGGSLLSWLLFP--VPScVYLPLSLKLLTMVVMMGGLYLGYLLSIM-NFLVLNLNSLVF-FLGSMWYVPVISVKVFSH 506
Cdd:MTH00108 461 SIFAGFLISNNIPPttIPQ-MTMPLYLKLTALAVTILGFILALELNLLtNNLKFKYPSNTFkFSNMLGYFPTIMHRLPPY 539
|
490 500
....*....|....*....|....*..
gi 1275874134 507 PTLF-SGYLYLKLLDYGWLELYGSQGI 532
Cdd:MTH00108 540 MNLTmSQKLASMLLDLIWLEKILPKTI 566
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
50-536 |
2.93e-73 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 245.37 E-value: 2.93e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 50 GLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV-IY 128
Cdd:MTH00020 75 GLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 129 YQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNY--VYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLP 205
Cdd:MTH00020 155 LTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 206 AAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMI-VNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:MTH00020 235 DAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFeQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 285 SILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDL 364
Cdd:MTH00020 315 VACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDL 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 365 ILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNfSVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFP 444
Cdd:MTH00020 395 ILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTN-LKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEM 473
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 445 VPSC-----VYLPLSLKLLTMVVMMGGLYLG-----YLLSIMNFLVLNLNSLVF-FLGSMWYVPVISVKVFSHPTLFSGY 513
Cdd:MTH00020 474 IWSFqitlpPIVPLSIKLLPVFLSLGGIGLViilyfYSSKTFRVPFSFIGRNSYtFLGSAWQFNYILNYFLIKKIWKGGH 553
|
490 500
....*....|....*....|....
gi 1275874134 514 LY-LKLLDYGWLELYGSQGIYDFM 536
Cdd:MTH00020 554 LIsYRTIDKGVLELVGPKGISNFL 577
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
53-399 |
5.64e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 236.65 E-value: 5.64e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 53 FDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 133 KSFNAGMLTA-LSNRVGDVLILISISWML-NFGSWNYvyyYDYFFSSFDYSIICYLiMG---AAMTKSAQLPFSAWLPAA 207
Cdd:MTH00137 166 ADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEI---QQIFALSKDFDLTLPL-LGlilAATGKSAQFGLHPWLPSA 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 208 MAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSI 286
Cdd:MTH00137 242 MEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQtALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVT 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 287 LAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:MTH00137 322 IGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAII 401
|
330 340 350
....*....|....*....|....*....|...
gi 1275874134 367 EMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:MTH00137 402 EALNTSHLNAWALTLTLIATSFTAVYSLRVVFF 434
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
49-406 |
1.35e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 235.67 E-value: 1.35e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 49 MGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV-I 127
Cdd:MTH00210 74 FGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 128 YYQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNYVYYYDYFFSSFDYS---IICYLIMGAAMTKSAQLPFSAW 203
Cdd:MTH00210 154 WLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINKEsltIICLLLFIGAVGKSAQLGLHTW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 204 LPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGL 282
Cdd:MTH00210 234 LPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPlALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGY 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 283 MMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSK 362
Cdd:MTH00210 314 MVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSK 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1275874134 363 DLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFN 406
Cdd:MTH00210 394 DLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
34-405 |
2.65e-61 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 214.50 E-value: 2.65e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 34 MLEWEvySLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILL 113
Cdd:PRK07376 72 LFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 114 GWDGLGLVSYCLV-IYYQNVKSFNAGMLTALSNRVGDVLILISI---SWMLNfgswnyvyyydyffsSFDYSII------ 183
Cdd:PRK07376 150 FWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWATG---------------SFDFDGIadrlse 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 184 ---------------CYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPmiVNSGASFFML 248
Cdd:PRK07376 215 lvssgavsgwlalllCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYP--VFEQFPAVMT 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 249 FI---GCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLD--- 322
Cdd:PRK07376 293 VIawtGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvg 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 323 -----QQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEmcSMSEMNFLIYLMFFVSTGLTIMYSVRLF 397
Cdd:PRK07376 373 hdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILG--AAFEANPALWFVGFLTAGMTAFYMFRMY 450
|
....*...
gi 1275874134 398 YYSLVSDF 405
Cdd:PRK07376 451 FLTFEGEF 458
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
7-403 |
7.25e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 202.07 E-value: 7.25e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 7 TVSMTFMMFSLFFFVLSLYLLLFDLSYMLEWEVYSLNsssivmgLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKI 86
Cdd:MTH00095 4 LIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLK-------FNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 87 RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLNFGswn 166
Cdd:MTH00095 77 YFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS--- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 167 yvyyYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFF 246
Cdd:MTH00095 154 ----YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 247 MLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDI 326
Cdd:MTH00095 230 MLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDG 309
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874134 327 RFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVS 403
Cdd:MTH00095 310 RNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
38-368 |
8.38e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 196.72 E-value: 8.38e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 38 EVYSLNSSSIVM---GLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLG 114
Cdd:MTH00032 60 ELYKWIESEIFIthiGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 115 WDGLGLVSYCLVIYYQN-VKSFNAGMLTALSNRVGDVLILISISWML-NFGSWNYVYYYDYFFSS--FD----------- 179
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIYkTIGSLDFLTFNGGSVGSgiMDrgyygggayes 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 180 ----YSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLFI-GCLT 254
Cdd:MTH00032 220 plapFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 255 MLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAM-GFPVLSFFHLLTHALFKSLLFLCAGCYIHGL-LDQQDIRFMGSF 332
Cdd:MTH00032 300 AFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGL 379
|
330 340 350
....*....|....*....|....*....|....*.
gi 1275874134 333 TMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEM 368
Cdd:MTH00032 380 IHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-385 |
1.21e-46 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 165.18 E-value: 1.21e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 105 SPNMISILLGWDGLGLVSYCLVIYY-QNVKSFNAGMLTALSNRVGDVLILISISWMLNFGSWNYVY----YYDYFFSSFD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 180 YSIICYLIMGAAMTKSAQLPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSG--ASFFMLFIGCLTML 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpfIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 257 MAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1275874134 334 MSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVS 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
12-486 |
4.33e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 158.50 E-value: 4.33e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 12 FMMFSLFFFVLSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVML 91
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 92 VGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWmlnfgswnyvyyy 171
Cdd:MTH00063 82 IVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL------------- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 172 dYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLFIG 251
Cdd:MTH00063 149 -SCWGGSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 252 CLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGS 331
Cdd:MTH00063 228 LLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 332 FTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLF--YYSLVSDFNFSV 409
Cdd:MTH00063 308 SILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCliLFGVKSSLSSGV 387
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874134 410 LRDFNNCGgdmhkgmtyllILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSL 486
Cdd:MTH00063 388 RFLFFNSG-----------LMVFLWLFINYYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLFSNWSSSL 453
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
51-399 |
9.16e-42 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 155.69 E-value: 9.16e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQ 130
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 131 NVKSFNAGMLTALSNRVGDVLILISISWM-LNFGSWNYVYYYDYF--FSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAA 207
Cdd:COG0651 152 TKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPDA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 208 MA-APTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGASFF----MLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGL 282
Cdd:COG0651 232 YPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFlgtlLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 283 MMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHGlLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGF 359
Cdd:COG0651 311 ILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1275874134 360 YSKDLILEmCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:COG0651 390 VSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
1.21e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 157.39 E-value: 1.21e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 54 DWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12647 63 DGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHERE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 134 SFNAGMLTALSNRVGDVLILI-------------SISWMLNFGswnyvyyyDYFFSSFDYSIICYLIMGAAMTKSAQLPF 200
Cdd:PRK12647 143 AARRAALQALLVTGGGGLALLaglillgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQFPF 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 201 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTLSQ 279
Cdd:PRK12647 215 HFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILpLFGGLTMLTGALLAVRQTDLKLILAYSTVSA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 280 LGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAgcyihGLLDQQ----DIRFMGSFTMSMPYSSICFHVSNLGLCG 352
Cdd:PRK12647 295 LGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVA-----GIIDHEtgtrDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330
....*....|....*
gi 1275874134 353 FPFLSGFYSKDLILE 367
Cdd:PRK12647 370 LPPLFGFLAKELIYE 384
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-396 |
1.87e-40 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 157.51 E-value: 1.87e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 43 NSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 123 YCLVIyyQNVKSFNAGMLTALSNRVGDVLILI-------------SISWMLNFGSWNYvyyydyffSSFDYSIICYLIMG 189
Cdd:PRK12650 147 FFLIA--RSGSGGEAGSIRTLILTFFGGLTLLaavaiaatqtgttSLSGILHSDVWAE--------KPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 190 AAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLFI-GCLTMLMAGLVANFEFDL 268
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIvGMITALMGAVFAVQKTDL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 269 KKVIALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAgcyihGLLDQQ----DIRFMGSFTMSMPYSSI 341
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLI-----GVVDHQagtrDIRRLGSLWRRMPFTFV 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874134 342 CFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGL----TIMYSVRL 396
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARL 430
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
43-366 |
6.64e-40 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 155.05 E-value: 6.64e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 43 NSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVS 122
Cdd:CHL00025 79 NDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 123 YCLV-IYYQNVKSFNAGMLTALSNRVGDVLILISIS---WMLnfGSWNYVYYYDYFF--------SSFDYSIICYLIMGA 190
Cdd:CHL00025 159 YLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfyWIT--GSFEFRDLFEIFNnliynnevNLLFATLCAFLLFLG 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 191 AMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIR-FNPMIVNSGASFFMLFIGCLTMLMAGLVANFEFDLK 269
Cdd:CHL00025 237 PVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIK 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 270 KVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGL--------LDQQDIRFMGSFTMSMPYSSI 341
Cdd:CHL00025 317 RGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKT 396
|
330 340
....*....|....*....|....*
gi 1275874134 342 CFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:CHL00025 397 TFLLGTLSLCGIPPLACFWSKDEIL 421
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
51-405 |
1.57e-36 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 145.37 E-value: 1.57e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYY- 129
Cdd:TIGR00940 71 LYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWh 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 130 QNVKSFNAGMLTALSNRVGDVLILISISWML----NFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLP 205
Cdd:TIGR00940 151 HRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 206 AAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:TIGR00940 231 DAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIM 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 285 SILAMGFPVLSF----------------FHLLTHALFKSLLFLCAGCYIHGlLDQQDIRFMGSFTMSMPYSSICFHVSNL 348
Cdd:TIGR00940 311 VLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASA 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874134 349 GLCGFPFLSGFYSKDLILE---------MCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDF 405
Cdd:TIGR00940 390 AMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRP 455
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
47-366 |
1.93e-35 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 138.95 E-value: 1.93e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 47 IVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDD----PF---KIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLG 119
Cdd:PRK06525 67 ALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehPVhegTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITG 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 120 LVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWM-LNFGSWNYVYYYDyfFSSFDYSIICYLIMGAAMTKSAQL 198
Cdd:PRK06525 147 LCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQTGTFALSALSG--LHGSLKYLVFLGILFAAWGKSAQL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 199 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFnpmIVNSG-----ASFFMLFIGCLTMLMAGLVANFEFDLKKVIA 273
Cdd:PRK06525 225 PFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA---IQSMGpiphvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 274 LSTLSQLGLM-----MSIL--AMGFPVlSFFHLLTHALFKSLLFLCAGC--YIHGLLDQQDIRFMGSftmSMPYSSICFH 344
Cdd:PRK06525 302 YSTITQLGYMffglsLAILgsRLALEG-SIAYIFNHAFAKSLFFLVAGAlsYSCGTRLLPRLRGVLK---KLPLVGVGFC 377
|
330 340
....*....|....*....|..
gi 1275874134 345 VSNLGLCGFPFLSGFYSKDLIL 366
Cdd:PRK06525 378 VAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
2.04e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 142.25 E-value: 2.04e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 54 DWMSVIFMSLVLFISSMVLFYSNMYMG-DDPFKiRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSpADPVP-RFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 133 KSFNAGMLTALS-------NRVGDVLILISISwmlnfGSwnyvYYYDYFFSSFD-------YSIICYLIMGAAMTKSAQL 198
Cdd:PRK12648 154 ADARRGARMALTvtgagglALLAGVLLLGHIV-----GS----YDLDVVLAAGDlirahplYPPALVLILLGAFTKSAQF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 199 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTL 277
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVgGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 278 SQLGLMMSILAMGFP---VLSFFHLLTHALFKSLLFLCAGCYIH--GlldQQDIRFMGSFTMSMPYSSICFHVSNLGLCG 352
Cdd:PRK12648 305 SHLGLITLLLGLGSPlaaVAAIFHIINHATFKASLFMAAGIIDHetG---TRDMRRLSGLRRLMPITATLAMVAAAAMAG 381
|
330
....*....|....*
gi 1275874134 353 FPFLSGFYSKDLILE 367
Cdd:PRK12648 382 VPLLNGFLSKEMFFA 396
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-367 |
5.14e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 140.83 E-value: 5.14e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 53 FDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKI-RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12644 72 LDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 132 VKS-----FNAGMLTA---LSNRVGdvLILISISwmlnFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAW 203
Cdd:PRK12644 152 RAAsrraaLQALLVTTaggLAMLVG--IIILGQA----AGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 204 LPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFM-LFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGL 282
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTvLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 283 MMSILAMGFP---VLSFFHLLTHALFKSLLFLcagcyIHGLLDQQ----DIRFMGSFTMSMPYSSICFHVSNLGLCGFPF 355
Cdd:PRK12644 306 LTVLVGIGTRdaaLAGLAMLLAHALFKAALFL-----VVGIIDHStgtrDIRKLSGLGRRQPVLAVVAALAAASMAGLPP 380
|
330
....*....|..
gi 1275874134 356 LSGFYSKDLILE 367
Cdd:PRK12644 381 LLGFVAKEAALE 392
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-544 |
5.07e-32 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 131.42 E-value: 5.07e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 54 DWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKI-RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQN- 131
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNn 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 132 -------VKSFNAGMLTALSNRVGDVLILI-----SISWMLNfgswnyvyYYDYFFSS--FDYSIICYLImgAAMTKSAQ 197
Cdd:PRK12646 157 gdsqfgaIQSFMITVFGGLALLVGFIMLYImtgtnNITEILG--------QADHIKNHglFIPMIFMFLL--GAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 198 LPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMI-VNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALST 276
Cdd:PRK12646 227 FPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 277 LSQLGLMMSILAMG-------------FPVLSFF----HLLTHALFKSLLFLCAGCYIHGLlDQQDIRFMGSFTMSMPYS 339
Cdd:PRK12646 307 ISQLGMIMAMVGIGggyaqhqqdaiasIYVFVLFaalfHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLFPKM 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 340 SICFHVSNLGLCGFPFLSGFYSKDLILE-MCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYSL--VSDFNFSVLRDFNNC 416
Cdd:PRK12646 386 NLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASIFTFTYALymVKEVFWGKYDSKVFT 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 417 GGDMHKGMTYLLILVILGGSLLSWllFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNF----LVLNLNSLVFFLGS 492
Cdd:PRK12646 466 KKNIHEPWLFSLPSLILMVLVPVI--FFVPNIFGKGIIVPALRSVSGGNHQVDQLAPHVSQWhgfnIPLLLTIIIILLGS 543
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1275874134 493 MWYVPVISVKVFSHPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYL 544
Cdd:PRK12646 544 VLAIKVDWKKVFTGKIRQISISKSYEMVYRHFEKFSTKRFKRVMQNRLNQYI 595
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-396 |
3.23e-31 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 129.18 E-value: 3.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 54 DWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 134 SFNAGMLTALSNRVGDVLILISISWMLNFGSWNY----VYYYDYFFSSFD----YSIICYLIMGAAMTKSAQLPFSAWLP 205
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYdiatILQDSELIENIKghplFLITLILIFIGAAAKSAQGPFYIWLP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 206 AAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLF-IGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:PRK12649 239 NAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLM 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 285 SIL--------AMGFPVLSfFHLLTHALFKSLLFLCAGCYIHGLLdQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFL 356
Cdd:PRK12649 319 TMYgyttyhepGLGVAAAT-FHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPL 396
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1275874134 357 SGFYSKDLI----LEMCSMSEMNFLIYLMFFVSTG--LTIMYSVRL 396
Cdd:PRK12649 397 NGFLSKEMFyetsVEMGALIGGPFTIIIPAVAVLGgvFTFAYSIKL 442
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
54-398 |
2.07e-29 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 123.50 E-value: 2.07e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 54 DWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKI-RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIY---- 128
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwyer 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 129 ----YQNVKSFNAGMLTALSNRVGDVLILI-----SISWMLNFGSwnyVYYYDYFFSsfdYSIIcyLIMGAAMTKSAQLP 199
Cdd:PRK12645 157 easrYGAQKSMLITVFGGLSMLGGFILLYImtgsfSIREMIANAD---EIQNSPLFI---PAMI--LILLGAFTKSAQFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTLS 278
Cdd:PRK12645 229 FYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVtLVGLITLFWGSLNAVKQTDLKGILAFSTVS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 279 QLGLMMSILAMGFPVLSF----------------FHLLTHALFKSLLFLCAGCYIHGlLDQQDIRFMGSFTMSMPyssIC 342
Cdd:PRK12645 309 QLGLIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMP---IT 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874134 343 FHVSNLGL---CGFPFLSGFYSKDLILE-MCSMSEMNF--------LIYLMFFVSTGLTIMYSVRLFY 398
Cdd:PRK12645 385 FTIALIGAlsmAGLPPFNGFLSKEMFFEsMLNATEANLfsldtwgvLFPVIAWVASVFTFVYSIIFIF 452
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
1.72e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 107.09 E-value: 1.72e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 56 MSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKsf 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 136 nAGMLTA----LSNRVGDVLILISIS-WMLNFGSWNY---VYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAA 207
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 208 MAAPTPVSALVHSStLVTAGVYLMIRFNPMIVNSGASFFMLFI-GCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSI 286
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLvGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*...
gi 1275874134 287 LAMGFPVLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-399 |
1.76e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 106.89 E-value: 1.76e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 185 YLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRF------NPMIVNSGASFFMLFIGCLTMLMA 258
Cdd:PRK08375 206 GFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfgGDFRFALGLGWLLAVLALLSMLVG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 259 GLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGC--YIHGLldqQDIRFMGSFT 333
Cdd:PRK08375 286 SLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAieVTYGT---RRLSELSGLG 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874134 334 MSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILeMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-366 |
7.28e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 103.04 E-value: 7.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 94 LFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKS-FNAGMLTALSNRVGDVLILISISWML-NFGSWNYVYYY 171
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 172 DYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLMIRFnpMIVNSGAS-----F 245
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRV--VFDLLGAPgwwwgV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 246 FMLFIGCLTMLMAGLVANFEFDLKKVIALST-------LSQLGLMMSILAMGFPVLS-------FFHLLTHALFKSLLFL 311
Cdd:PRK06521 278 LVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSLLFL 357
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1275874134 312 CAGCYIHGlLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:PRK06521 358 GAGAVLHA-TGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
53-384 |
7.44e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 102.89 E-value: 7.44e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 53 FDWMSVIFMSLVLFISSMVLFYSNMY---MGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIY- 128
Cdd:PRK08667 75 IDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNd 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 129 YQNVKSFNAGMLT-ALSNRVGDVLILISISWMLNFGSWNYVYYYdyfFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAA 207
Cdd:PRK08667 155 YQEEETQRAGIFYfVMTQLSTVFLMLGIIVLFIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 208 M-AAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGA--SFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:PRK08667 232 HpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 285 --------------SILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDqQDIRFMGSFTMSMPYSSICFHVSNLGL 350
Cdd:PRK08667 311 mgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSI 389
|
330 340 350
....*....|....*....|....*....|....*.
gi 1275874134 351 CGFPFLSGFYSKDLILE--MCSMSEMNFLIYLMFFV 384
Cdd:PRK08667 390 AALPPFNGFASELLLYEsfFQSFSVADPLIKILLFS 425
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-397 |
1.28e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 101.05 E-value: 1.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 49 MGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKI--RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV 126
Cdd:PRK06589 77 IGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 127 IYYQNVKSFNAGmLTALSNRVGDVLILISISWMLNFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPA 206
Cdd:PRK06589 157 GHTRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 207 AMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVN-------SGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQ 279
Cdd:PRK06589 236 AMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGlsylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 280 LGL------MMSILAMGfpvLSFFHLLTHALFKSLLFLCAGCyIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGF 353
Cdd:PRK06589 316 LSLallsafILTPKALG---AAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGI 391
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1275874134 354 PFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLF 397
Cdd:PRK06589 392 PIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
61-361 |
1.83e-22 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 101.53 E-value: 1.83e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 61 MSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGML 140
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 141 TA-LSNRVGDVLILISISWMLNF-GSWNYVYYYDYF----FSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPV 214
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 215 SALvHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPV 293
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPvALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874134 294 LSFFHLLTHALFKSLLFLCAGCYIHGLLDqQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYS 361
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-398 |
1.22e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.50 E-value: 1.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 131 NVK-SFNAGMLTALSNRVGDVLILISISWM------LNFGSWNYVYYYDYFFSSF----DYSIICYLIMGAA----MTKS 195
Cdd:PRK12667 158 DRGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMADLSAKIRGLSFPLTGglagNPPLALGVALALAlwafTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 196 AQLPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGA---------SFFMLFIGCLTMLMAGLVANFE 265
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPslidfraalSPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 266 FDLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSIC 342
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874134 343 FHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIyLMFFVSTGLTIMYSVRLFY 398
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPA-LVLLIASAISLVGYFRAWY 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-398 |
3.03e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 90.93 E-value: 3.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 54 DWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNV- 132
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 133 KSFNAGMLTALSNRVGDVLILISISWML-NFGSWNYVYY-YDYFFSSFDYSIICY-LIMGAAMTKSAQLPFSAWLPAAM- 208
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLaVKMSENPTVVAKIALaLFIAGLAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 209 AAPTPVSALVHSSTLvtAGVYLMIR-----FNPMIVNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLM 283
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 284 M-----SILAMGFPVLS----------FFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSICFHVSNL 348
Cdd:PRK08376 327 LlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1275874134 349 GLCGFPFLSGFYSKDLILEmcSMSEMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFH 453
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-367 |
4.66e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 90.01 E-value: 4.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 186 LIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGAsfFMLFIGCLTMLMAGLVANFE 265
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 266 FDLKKVIALSTLSQLGLmmsILAMgfPVLSFFHLLTHALFKSLLFLCAGCyIHGLLDQQDIRFMGSFTMSMPYSSICFHV 345
Cdd:PRK07234 267 KDLKRMLAFSTISQLGF---ILAA--PLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSI 340
|
170 180
....*....|....*....|..
gi 1275874134 346 SnlglcGFPFLSGFYSKDLILE 367
Cdd:PRK07234 341 A-----GFPLLAGFVSKVLTLK 357
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-569 |
1.46e-18 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 83.37 E-value: 1.46e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 392 YSVRLFYYSLVSDFNFSVLRDFNNCGGDMHKGMTYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGY 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 472 LLSIMN---FLVLNLNSLVFFLGSMWYVPVISVKVFSHPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFD 548
Cdd:pfam06455 81 ELSNLSnkqLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170 180
....*....|....*....|.
gi 1275874134 549 YNFKTYTIMFMSMVLVILIGM 569
Cdd:pfam06455 161 GLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
175-314 |
4.55e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 81.24 E-value: 4.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 175 FSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLMIRFNPMIVNSGASFFMLFIGCLT 254
Cdd:PRK08601 198 LGTWEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASIS 276
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 255 MLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08601 277 VLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
38-398 |
1.57e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.66 E-value: 1.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 38 EVYSLNSSSIVMGLIFDWMSVIFMSL-VLFISSMVLFYSNMYMGDDPFKIRFVMLVGLFVLSMIFlivSPNMISILLGWD 116
Cdd:PRK08668 52 EKLTLFFGGFKLTFTLTHLSWFFAMIsLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 117 GLGLVSYcLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNY--VYYYDYFFSSFDYSIICYL-IMGAAM 192
Cdd:PRK08668 129 IMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFadISQGLINDTSTGFALIVFLfLLAFGV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 193 TKSAQLPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYLMIR----------FNPMIVNSGASFF---MLFIGCLTMLMA 258
Cdd:PRK08668 208 AKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLvlyvlpgtklFSEFGTYRGVPLFnyiLAWLGNISIIVG 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 259 GLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMS 335
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIY-RTGTTKISEMGGLIEK 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1275874134 336 MPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGlTIMYSVRLFY 398
Cdd:PRK08668 366 MPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIG-SFLYVFRPLA 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
186-396 |
5.42e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 71.34 E-value: 5.42e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 186 LIMGAAMtKSAQLPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLMIR--FNPMIVNSGASF--FMLFIGCLTMLMAGL 260
Cdd:PRK08377 212 LIFGLAV-EAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilYLMQNANGWSSVlkLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 261 VANFEFDLKKVIALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAGcYIHGLLDQQDIRFMGSFTMSMP 337
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVG-YVGITLGGTEIEKFEGLGKRMP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874134 338 YSSICFHVSNLGLCGFPFLSGFYSKDLILeMCSMSEMNFLIYLMFFVSTGLTIMYSVRL 396
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-399 |
4.47e-12 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 68.77 E-value: 4.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 109 ISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMlnfgswnYVYYYDYFFSSFD--YSIICYL 186
Cdd:PRK12668 116 LTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLH-------YAETGSFAFGAIAglGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 187 IMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVnsgasfFMLFIGCLTMLMAGLVANFEF 266
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE------LLIYIGAAMAVYGVFFALLEN 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 267 DLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSICF 343
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALFC 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874134 344 HVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYF 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-400 |
1.86e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 66.51 E-value: 1.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 193 TKSAQLPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGASF---FMLFIGCLTMLMAGLVANFEFDL 268
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 269 KKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSICFHV 345
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1275874134 346 SNLGLCGFPFLSGFYSKDLILEmCSMSEMNFLIYLMFFVSTGLTIMYSVRLFYYS 400
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKG 432
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
199-366 |
3.08e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 65.87 E-value: 3.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 199 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYLMIRFNPMIVNSGASFF---MLFIGCLTMLMAGLVANFEFDLKKVIAL 274
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFPEASAYFaplLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 275 STLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGcYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLC 351
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
170
....*....|....*
gi 1275874134 352 GFPFLSGFYSKDLIL 366
Cdd:COG1008 385 GLPGTSGFVGEFLVL 399
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
193-366 |
2.03e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 63.03 E-value: 2.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 193 TKSAQLPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGASFF----MLFIGCLTMLMAGLVANFEFD 267
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFpgrlLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 268 LKKVIALSTLSQLGLMMSILAMGFPVLSF---FHLLTHALFKSLLFLCAG--CYIHGLLDQQDIRFMgsfTMSMPYSSIC 342
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIFFASGnvLQKYGTRDINVIRGL---LKVSPLTGWG 381
|
170 180
....*....|....*....|....
gi 1275874134 343 FHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:PRK06458 382 LMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
1.29e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.00 E-value: 1.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 198 LPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLMIRFNpmIVNSGASFF----MLFIGCLTMLMAGLVANFEFDLKKVI 272
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLS--LLGGNAPLWwgvaLLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 273 ALSTLSQLGLMM---------------SILAMGFpVLSFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMP 337
Cdd:PRK08042 274 AYHTLENIGIILlglgagvtgialeqpALIALGL-VGGLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGKKMP 351
|
170 180
....*....|....*....|..
gi 1275874134 338 YSSICFHVSNLGLCGFPFLSGF 359
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
194-400 |
1.30e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 60.73 E-value: 1.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 194 KSAQLPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIV---NSGASFFMLFIGCLTMLMAGLVANFEFDLKK 270
Cdd:PRK12663 220 KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFpqeRELLHPLLATMAAITMVIGALGALAYKDIRR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 271 VIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIhGLLDQQDIRFMGSFTMSMPYSSICFHVSN 347
Cdd:PRK12663 299 IAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEPLFGALFLILI 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1275874134 348 LGLCGFPFLSGFYSKDLILEmCSMSEMNFLIYLMFFVsTGLTIMYSV-RLFYYS 400
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVQ-GALDNGAYILLALMLI-TSLITMYSLfRIFFLA 429
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
194-367 |
1.97e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.98 E-value: 1.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 194 KSAQLPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLMIRFNPMIVNSGA-SFFMLFIGCLTMLMAGLVANFEFDLKKV 271
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGlDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 272 IALSTLSQLGLMMSILAMGFPV-LS--FFHLLTHALFKSLLFLCAgcyihGLLDQQD----IRFMGSFTMSMPYSSICFH 344
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVV-----GLIERQAgsssLRRLGGLAKASPLLAVLFF 375
|
170 180
....*....|....*....|...
gi 1275874134 345 VSNLGLCGFPFLSGFYSKDLILE 367
Cdd:PRK12665 376 VPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
194-314 |
8.85e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 57.84 E-value: 8.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 194 KSAQLPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGA----SFFMLFIGCLTMLMAGLVANFEFDL 268
Cdd:PRK08676 219 KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqfSNVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1275874134 269 KKVIALSTLSQLGLMMSILAMGFPVLSF---FHLLTHALFKSLLFLCAG 314
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG 346
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
51-362 |
1.00e-08 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.82 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDP-FKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV-IY 128
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGlLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 129 YQNVKSFNAGM----LTALSNrvgdVLILISISWMLNF-GSWNYVYYYDYFFSSFDYSIIcyLIMGAAMT------KSAQ 197
Cdd:COG1007 146 RDDRRSSEAALkyflLGALSS----GFLLYGISLLYGAtGSLNLAGIAAALAAGGANSPL--LLLGLVLVlaglafKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 198 LPFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLMIRFNPMIVNSGASFF---MLFIGCLTMLMAGLVANFEFDLKKVI 272
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGLAADWqllLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 273 ALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLG 349
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330
....*....|...
gi 1275874134 350 LCGFPFLSGFYSK 362
Cdd:COG1007 378 LAGIPPTAGFFGK 390
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
90-366 |
2.80e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 56.49 E-value: 2.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 90 MLVGLFVLSMIFLIV--SPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWM--LNFGSW 165
Cdd:TIGR01972 108 FYALLLLLEAGVIGVflALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 166 NYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLMIRFN-PMIVNSGA 243
Cdd:TIGR01972 188 DLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFPDASL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 244 SF--FMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGcYIH 318
Cdd:TIGR01972 267 YFapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVG-VLY 345
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1275874134 319 GLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:TIGR01972 346 ERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
143-366 |
3.54e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 55.98 E-value: 3.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 143 LSNRVGDVLILISISWM-----LNFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMA-APTPVSA 216
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 217 LvHSSTLVTAGVYLMIRFN-PMIVNSGASF--FMLFIGCLTMLMAGLVANFEFDLKKVIALStlsqlglmmSILAMGFPV 293
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPDASHEFapIIITLGVIAIIYGALVALAQTDIKKLIAYS---------SISHMGFVT 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 294 LSFFHL------------LTHALFKSLLFLCAGcYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYS 361
Cdd:PRK05846 318 LGIFAGnqlgiqgaifqmISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVG 396
|
....*
gi 1275874134 362 KDLIL 366
Cdd:PRK05846 397 EFLIL 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-392 |
5.73e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.04 E-value: 5.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 187 IMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRF-------NPMIVNSGASFFMLFIGCLTMLMAG 259
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGS 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 260 LVANFEFDLKKVIALSTLSQLG---LMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLlDQQDIRFMGSFTMSM 336
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874134 337 PYSSICFHVSNLGLCGFPFLSGFYSKDLILEmCSMSEMNFLIYLMFFVSTGLTIMY 392
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILD-AFIKSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
222-398 |
2.71e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.03 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 222 TLVTAGVYLMIRFNPMIVNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFP---VLSFFH 298
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPlgiVAGIFH 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 299 LLTHALFKSLLFLCAGCyIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLI 378
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELA 402
|
170 180
....*....|....*....|
gi 1275874134 379 YLMFFVSTGlTIMYSVRLFY 398
Cdd:PRK06277 403 IIMIIVSIG-TFVSMMKAFY 421
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-403 |
9.04e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.57 E-value: 9.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 51 LIFDWMSVIFMSLVLFISSMVLFYSNMymgdDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK12664 32 PVYNLDLVLFIVLSFSLALIFLYILPI----KNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGC 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 131 NVKSFNAGMLTALSNRVGDVLILISISWMLNFGSWNyvyyydyffssfdySIICYLIMGAAMTKSAQLPFSAWLPAAMAA 210
Cdd:PRK12664 108 PGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYT--------------GYCKLLFMLGLLINCACFPASSWVVDAYPA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 211 PTPVSALVHSSTLVTAGVYLMIRFNpmivnSGASFfMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMmsILAMG 290
Cdd:PRK12664 174 ASNFGIIVLSLFTTKVAALVLLLFF-----SGEEI-LLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLL--IIAIG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 291 FPVLS-------FFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMpySSICFHVSNLGLCGFPFLSGFYSKD 363
Cdd:PRK12664 246 FSGSSgvaigilILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFKMSL--EAMCCIIAILNMGAFPGTAGFVSKS 323
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1275874134 364 LILEMCSMSEMNFLIYLMFFVSTGLTIMYSV--RLFYYSLVS 403
Cdd:PRK12664 324 LITHSIDTAGLTLVLYKKLFLICSLLLFASVglKFFWYAFIS 365
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-314 |
9.05e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.63 E-value: 9.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 60 FMSLVLFISSMVLFYSNMY-MGDDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNvKSFNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYsIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 139 MLTALSNrvgdvlilISISWMLNFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPF--SAWLPAAMA-APTPVS 215
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 216 AlVHSSTLVTAGVYLMIRFNPMIVNSGASFF---MLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAM--- 289
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270
....*....|....*....|....*....|....*
gi 1275874134 290 ---------GFPVLS-FFHLLTHALFKSLLFLCAG 314
Cdd:PRK06459 275 tkqlitsieHFSLITvILYSFAHSVAKTGLFLSSG 309
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
41-88 |
5.14e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.87 E-value: 5.14e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1275874134 41 SLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGDDPFKIRF 88
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-400 |
9.63e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 44.81 E-value: 9.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 184 CYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIrfnpMIVNSGASFFMLFIGCLTMLMAGLVAN 263
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLL----MTSNSLNPTLLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 264 FEFDLKKVIALSTLSQLGLMMSILAMGfPVLSFFHLLTHALFKSLLFLcagcyIHGLLDQQDIRFMGSFTMSMPYSSICF 343
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874134 344 HVSNLGLCGFPFLSGFYSKDLILEMCSMSEMNFLIYLMFFVSTgLTIMYSVRLFYYS 400
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSL-LSLFFYLRLTYIS 300
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
101-362 |
1.50e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 41.14 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 101 FLIVSPNMISILLGWDGLGLVSYCLVIYY-QNVKSFNAGMLTALSNRVGDVLILISISWM-------LNFGSWNYVYYYD 172
Cdd:CHL00049 126 FLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWLyglsggeIELQEIVNGLINT 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 173 YFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLMIRFNPMI---VNSGASFFML 248
Cdd:CHL00049 206 QMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPfyfSSNEWHLLLE 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874134 249 FIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCA-GCYI-HGLLDQQD- 325
Cdd:CHL00049 285 ILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTfACIVlFGLRTGTDn 364
|
250 260 270
....*....|....*....|....*....|....*..
gi 1275874134 326 IRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSK 362
Cdd:CHL00049 365 IRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| |
