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Conserved domains on  [gi|1275874133|gb|ATU74758|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Thoradonta obtusilobata]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-116 3.18e-34

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 114.49  E-value: 3.18e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKW 116
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-116 3.18e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 114.49  E-value: 3.18e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKW 116
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-115 3.22e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 90.95  E-value: 3.22e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  20 MTASKLISKKTiYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPmIPIMQSSMVKYWWLSSSVFVL 99
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP-WAVSFRELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1275874133 100 ILLMGLYYEWNQGMLK 115
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 12-116 7.10e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 7.10e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  12 SILLPIIMMTASKLISKKTiYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPmIPIMQSSMVKYWW 91
Cdd:COG0838    15 ALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP-WAVVFRELGWFGL 92

                          90       100
                  ....*....|....*....|....*
gi 1275874133  92 LSSSVFVLILLMGLYYEWNQGMLKW 116
Cdd:COG0838    93 IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-116 3.18e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 114.49  E-value: 3.18e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKW 116
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 3-118 1.92e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 109.95  E-value: 1.92e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   3 YLLMITMMMSILLPIIMMTASKLISKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIM 82
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1275874133  83 QSSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWAS 118
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 4-117 8.10e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 103.15  E-value: 8.10e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00202    3 LILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLK 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWA 117
Cdd:MTH00202   83 SSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 4-118 1.27e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 103.01  E-value: 1.27e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00012    3 LMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILM 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWAS 118
Cdd:MTH00012   83 TSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 4-117 7.23e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 93.06  E-value: 7.23e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKTIyDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00136    3 LITTILTITIALSLILAIVSFWLPQMTP-DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQ 81

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1275874133  84 --SSMVKYWWLSSsvfVLILL-MGLYYEWNQGMLKWA 117
Cdd:MTH00136   82 lpSPLLTFFWATA---VLILLtLGLIYEWLQGGLEWA 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 4-117 1.21e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 92.64  E-value: 1.21e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKkTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00113    2 NLISMLTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWA 117
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-117 1.42e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 92.36  E-value: 1.42e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKTIyDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNP-DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQ 79

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWA 117
Cdd:MTH00069   80 LNTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 3.15e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 91.58  E-value: 3.15e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   1 MIYLLMITMMMSILLPIImmtASKLISKKTiyDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIP 80
Cdd:MTH00042    4 LIFFLLIILILTSLLLLA---GHFLPSRSP--DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPP 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1275874133  81 IMQSSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWA 117
Cdd:MTH00042   79 ATLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-115 3.22e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 90.95  E-value: 3.22e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  20 MTASKLISKKTiYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPmIPIMQSSMVKYWWLSSSVFVL 99
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP-WAVSFRELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1275874133 100 ILLMGLYYEWNQGMLK 115
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 5-117 4.05e-25

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 91.46  E-value: 4.05e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   5 LMITMMMSILLPIIMMTASKLISKKTiYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLP-MIPIMQ 83
Cdd:PRK06602   11 FLIFLIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFRE 89

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1275874133  84 SSMVKYWwlSSSVFVLILLMGLYYEWNQGMLKWA 117
Cdd:PRK06602   90 IGWLGFV--EAMIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 12-116 7.10e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 7.10e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  12 SILLPIIMMTASKLISKKTiYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPmIPIMQSSMVKYWW 91
Cdd:COG0838    15 ALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP-WAVVFRELGWFGL 92

                          90       100
                  ....*....|....*....|....*
gi 1275874133  92 LSSSVFVLILLMGLYYEWNQGMLKW 116
Cdd:COG0838    93 IEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 5-117 2.80e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 86.53  E-value: 2.80e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   5 LMITMMMSILLPIIMMTASKLISKKTIYdREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQS 84
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1275874133  85 SMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWA 117
Cdd:MTH00106   82 NNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-116 6.63e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 85.72  E-value: 6.63e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   1 MIYLLMITMMMSILLPIIMMTASKLisKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIP 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWL--PKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPW 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1275874133  81 IMQSSMVKYWWLSSsvFVLILLMGLYYEWNQGMLKW 116
Cdd:MTH00203   79 SNQLSSLSLLLAFL--FLILLTLGLIYEWLQGGLEW 112
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 3-116 1.18e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 74.71  E-value: 1.18e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   3 YLLMITMMMSILLPIIMMTASKLISKKtIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIM 82
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLY 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1275874133  83 -QSSMVKYWWLssSVFVLILLMGLYYEWNQGMLKW 116
Cdd:MTH00018   80 nQIAPFGFWTM--VGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 7-116 8.02e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 70.12  E-value: 8.02e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   7 ITMMMSILLPIIMMTASKLISKKTIyDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIM-QSS 85
Cdd:MTH00055   10 ILLLFSIGLSTVISGASYIVGVKQP-DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYnQIG 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1275874133  86 MVKYWWLssSVFVLILLMGLYYEWNQGMLKW 116
Cdd:MTH00055   89 LFGFWVM--YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 33-116 4.81e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 60.72  E-value: 4.81e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  33 DREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPM-IPIMQSSMVKYWWLSSsvFVLILLMGLYYEWNQ 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWsIVFNQLNLFSFWIVYT--FLIVLAIGLAYEWIK 117


                  ....*
gi 1275874133 112 GMLKW 116
Cdd:MTH00030  118 GGLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
4-116 2.51e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.90  E-value: 2.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   4 LLMITMMMSILLPIIMMTASKLISKKtIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMiPIMQ 83
Cdd:PRK07756   11 IVLIFLLLGILLPVVALTLGRMLRPN-KPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPW-AVAY 88

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1275874133  84 SSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKW 116
Cdd:PRK07756   89 DKLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-116 3.07e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 50.83  E-value: 3.07e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  32 YDREKLSPFECGFNP--QTHSRLPFSIQFFLISMLFLVFDIEIALMLPMiPIMQSSMVKYWWLSSSVFVLILLMGLYYEW 109
Cdd:PRK07928   33 YNRAKLEAYECGIEPtpQPAGGGRFPVKYYLTAMLFIVFDIEIVFLYPW-AVSFDALGVFGLVEMALFMLTVFVAYAYVW 111


                  ....*..
gi 1275874133 110 NQGMLKW 116
Cdd:PRK07928  112 RRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-116 6.35e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.99  E-value: 6.35e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   7 ITMMMSILLPIIMMTASKLISKKTIyDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQSSM 86
Cdd:CHL00022   12 AFLIISSLIPILAFLISGLLAPISK-GPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG 90

                          90       100       110
                  ....*....|....*....|....*....|
gi 1275874133  87 VkYWWLSSSVFVLILLMGLYYEWNQGMLKW 116
Cdd:CHL00022   91 V-SAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
6-118 1.34e-08

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 49.28  E-value: 1.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   6 MITMMMSILLPIIMMTASKLISKKTIYDREKL--SPFECGFNPqTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQ 83
Cdd:PRK08489   15 VLLVLTFVAFFLTTRLARFISRKLAQKNTEKLklAIYECGPEP-VKQPNRISSHFYIMALLFILFDVEIVFMFPWAVDFK 93

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1275874133  84 sSMVKYWWLSSSVFVLILLMGLYYEWNQGMLKWAS 118
Cdd:PRK08489   94 -LLGLFGLIEMLLFIVLLTIGFIYAWKKGALEWQS 127
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 27-116 1.31e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.34  E-value: 1.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  27 SKKTIYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMiPIMQSSMVKYWWLssSVFVLILLMGLY 106
Cdd:MTH00060   28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNM-PFQGLLFYNFWYY--YFFLLLLFLGFV 104

                          90
                  ....*....|
gi 1275874133 107 YEWNQGMLKW 116
Cdd:MTH00060  105 VELFSGYVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 33-116 1.57e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 38.64  E-value: 1.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133  33 DREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLP-MIPIMQSSMVKYwwLSSSVFVLILLMGLYYEWNQ 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPwAFDFKRLGLIPF--IETLIFLAMPLFAVYYAFKM 137


                  ....*
gi 1275874133 112 GMLKW 116
Cdd:PRK06432  138 GYMRW 142
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 5-116 2.38e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 37.57  E-value: 2.38e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874133   5 LMITMMMSILLPIIMMTASKLISKKTiYDREKLSPFECGFNPQTHSRLPFSIQFFLISMLFLVFDIEIALMLPMIPIMQS 84
Cdd:MTH00092    4 LIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFS 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1275874133  85 SMVKYWwlsssVFVLILLMGLYYEWNQGMLKW 116
Cdd:MTH00092   83 SLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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