|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-556 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 612.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 2 LNNFYLSSLFFLVCGFISFLVSLVFMLYDVSYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSS 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 82 DLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 162 FGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 242 KMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGML 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 322 DNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 402 INLFSFNTLYNFS-VGRDMYLGMSALLLFTVFGGSLLSWLIFPTPVCVYLPLGLKLLTILVVLLGLYLGYFLSLSCVNLS 480
Cdd:MTH00165 401 SGDFNLKSLNNLSdESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1275874120 481 SMCSSSFFL-DFLSLMWFMPLLSTKLVGGIILTMGGKYYSFLDHGWLEYYGAQGLYGFFIYFIKQYLGLFDYNFKTY 556
Cdd:MTH00165 481 LKSLKNYKLsSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIY 557
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
7-538 |
4.39e-169 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 491.67 E-value: 4.39e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 7 LSSLFFLVCGFISFLVSLVFMLYDVSYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSD 86
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 87 RFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWN 166
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 167 YIYYYDYFFhsydYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKM-NF 245
Cdd:MTH00151 166 ILSMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGfSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 246 ILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQD 325
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 326 IRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLF 405
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 406 SFNTLYNFSV-GRDMYLGMSALLLFTVFGGSLLSWLIFPTPVCVYLPLGLKLLTILVVLLGLYLGYFLSLSCVNLSSMCS 484
Cdd:MTH00151 402 KSSSLSSKSDeDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVK 481
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1275874120 485 SSFfldFLSLMWFMPLLSTKLVGGIILTMGGKYYSFLDHGWLEYYGAQGLYGFF 538
Cdd:MTH00151 482 LSF---FFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKAN 532
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
17-543 |
5.80e-159 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 466.04 E-value: 5.80e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 17 FISFLVSLVFMLYDVSYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFV 96
Cdd:MTH00209 14 LFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 97 LSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYiyyydyFFH 176
Cdd:MTH00209 94 LSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNI------FYL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 177 SYDYSI---VCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKM-NFILLLIGC 252
Cdd:MTH00209 168 NFNSNLgsvISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFfSMSLLLLGS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 253 LTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGSL 332
Cdd:MTH00209 248 LTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 333 TLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFNTLYN 412
Cdd:MTH00209 328 WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNS 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 413 -FSVGRDMYLGMSALLLFTVFGGSLLSWLIFPTPVCVYLPLGLKLLTILVVLLGLYLGYFLSLSCVNLSSMCSSSFfldF 491
Cdd:MTH00209 408 sFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNY---F 484
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1275874120 492 LSLMWFMPLLSTKLVGGIILTMGGKYYSFLDHGWLEYYGAQGLYGFFIYFIK 543
Cdd:MTH00209 485 LSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSK 536
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-535 |
3.51e-155 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 456.53 E-value: 3.51e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 1 MLNNFYLSSLFFLVCGFISFLVSLVFMLYDVSYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMS 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 81 SDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 161 NFGSWNYIYYYDYFFHSYdysiVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFS 240
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 241 SKM-NFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHG 319
Cdd:MTH00207 239 TYWfNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 320 MLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYY 399
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 400 SLI-NLFSFNTLYNFSVGRDMYLGMSALLLFTVFGGSLLSWLIFPTPVCVYLPLGLKLLTILVVLL-GLYLGYFLSLSCV 477
Cdd:MTH00207 399 VLWsPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLgALLAWLFTTPNIT 478
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874120 478 NLSSMCSSSFFLDFLSLMWFMPLLSTKLVGGIILTMGGKYYSFLDHGWLEYYGAQGLY 535
Cdd:MTH00207 479 KTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTF 536
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-556 |
4.12e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 349.25 E-value: 4.12e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 1 MLNNFYLSSLFFLVCGFISFLVSLVFMLYDV--SYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDY 78
Cdd:MTH00211 23 PLNNSKLHIKKAVKLSFFISLIPLLIFLDQGleTILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 79 MSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTAL-SNRIGDVFILLSIS 157
Cdd:MTH00211 103 MSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 158 WML-NFGSWNYiyyYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP 236
Cdd:MTH00211 183 WLLlNLNSWEI---SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 237 MLFSSKMNF-ILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGC 315
Cdd:MTH00211 260 LFQNNQLILgAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGS 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 316 YIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFR 395
Cdd:MTH00211 340 IIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFR 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 396 LLYYSLINLFSFNTLYNFSVGRDMYLG-MSALLLFTVFGGSLLSWLIFPT-PVCVYLPLGLKLLTIlvvlLGLYLGYFLS 473
Cdd:MTH00211 420 LIFLSLGGYPRFLSLSPINENYKLLKNpLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPL----LVTIVGLLLG 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 474 LSCVNLSSMCSSSFFLDFLSLMWFMPLLSTKLVGGIILTMGGKY-YSFLDHGWLEYYGAQGLYGFFIYFIKQYLGLFDYN 552
Cdd:MTH00211 496 LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGL 575
|
....
gi 1275874120 553 FKTY 556
Cdd:MTH00211 576 IKSY 579
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
18-534 |
5.14e-94 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 299.77 E-value: 5.14e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 18 ISFLVSLV----FMLYDV-SYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILV 92
Cdd:MTH00004 42 LAFLISLIpltlFLNSGTeSITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 93 SLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISWM-LNFGSWNYiyy 170
Cdd:MTH00004 122 LIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEI--- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 171 yDYFFHSYDYSIVCLM-VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSK-MNFILL 248
Cdd:MTH00004 199 -QQLFSPTQTPTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQtALTICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 249 LIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRS 328
Cdd:MTH00004 278 CLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRK 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 329 MGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFN 408
Cdd:MTH00004 358 MGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTP 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 409 TLYNFS-VGRDMYLGMSALLLFTVFGGSLLSWLIFPT-PVCVYLPLGLKLLTILVVLLGLYLGYFLSLSCVNLSSMCSSS 486
Cdd:MTH00004 438 PTTPINeNTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNT 517
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1275874120 487 FFLDFLSLMWFMPL---LSTKlvggIILTMGGKYYSFL-DHGWLEYYGAQGL 534
Cdd:MTH00004 518 LHNFSNQLAFFNPLthrLLPM----TLLKSSQKIATHLiDLSWLEKMGPKGL 565
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
17-441 |
1.27e-90 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 290.90 E-value: 1.27e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 17 FISFLVSLVFML-----YDVSYLIEWeiYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIIL 91
Cdd:COG1009 39 LAAFVLSLLLFPavlggEVVVELYTW--IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAY 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 92 VSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISWMLN-FGSWNY-- 167
Cdd:COG1009 117 LLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFse 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 168 -IYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKM-NF 245
Cdd:COG1009 197 lLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 246 ILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMlDNQD 325
Cdd:COG1009 277 VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRD 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 326 IRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVC-SFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINL 404
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAlEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGK 435
|
410 420 430
....*....|....*....|....*....|....*...
gi 1275874120 405 FSFNTLYNFS-VGRDMYLGMSALLLFTVFGGSLLSWLI 441
Cdd:COG1009 436 PRPKTPKHPHeSPWLMTLPLVVLAVLSLVLGLLLPGLL 473
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
17-543 |
3.53e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 286.80 E-value: 3.53e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 17 FISFLVSLVFMLYDV-SYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLF 95
Cdd:MTH00066 43 FISLIPLMIFINQGLeSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 96 VLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISW-MLNFGSWNYiyyyDY 173
Cdd:MTH00066 123 LIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAvLYNRVGDIGLILSMAWlAMNTNSWEL----QQ 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 174 FFHSYDYSIVCLMVM-FAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNF-ILLLIG 251
Cdd:MTH00066 199 IFLLNDNSTLPLLGLiLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALtICLCLG 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 252 CLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGS 331
Cdd:MTH00066 279 ALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGG 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 332 LTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFNTLY 411
Cdd:MTH00066 359 LQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLS 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 412 NFSVGRDMYLG-MSALLLFTVFGGSLLSWLIFPT-PVCVYLPLGLKLLTILVVLLGLYLGYFLSLSCVNLSSMCSSSFFL 489
Cdd:MTH00066 439 PINENNPLIINpIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMHSFS 518
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 1275874120 490 DFLSlmwFMPLLSTKLVGGIILTMGGKYYSFL-DHGWLEYYGAQGLYGFFIYFIK 543
Cdd:MTH00066 519 NLLA---FFPTIIHRLSPKTNLNSGQNIATHLtDMTWYEKSGPKGLTNQQLPPIK 570
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
17-397 |
8.12e-87 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 281.28 E-value: 8.12e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 17 FISFLVSLVfMLYDVS---------YLIEWeiYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDR 87
Cdd:PRK06590 40 GLSALLSLV-VFFDFLlgggrafsqTLWTW--ISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRR 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 88 FIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISWML-NFGSW 165
Cdd:PRK06590 117 FFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 166 NYIYYYDYFFHSYDYS-----IVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM--L 238
Cdd:PRK06590 197 NYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLfeL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 239 FSSKMNFILLlIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIH 318
Cdd:PRK06590 277 SPEALLFVAI-VGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874120 319 GMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVcSFSCMNYFIYFLFFFSTGLTASYSFRLL 397
Cdd:PRK06590 356 AMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEA-AFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
3-549 |
2.26e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 280.32 E-value: 2.26e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 3 NNFYLSSLFFLVcgFISFLVSLVFMLYD----VSYLIEW-EIYAINSSVivmGVLFDWMSLIFMGFVFIISSMVLFYSSD 77
Cdd:MTH00208 55 SNFSISLLKTLA--FLSLINLLIWILLGcpniNISLSNWlSNTLFNFSL---SFIFDFYFILFFSVALFVTWSIIEFSHY 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 78 YMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSI 156
Cdd:MTH00208 130 YMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 157 SW-MLNFGSWNyIYYYDYFFHSYDYSIVCLMV--MFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 233
Cdd:MTH00208 210 SLsLINFNSWN-LNEILSLNNSNSFLINILLFgiLLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 234 FSPML-FSSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLC 312
Cdd:MTH00208 289 TSPLIsNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 313 AGCYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASY 392
Cdd:MTH00208 369 SGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVY 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 393 SFRLLYYSLINLFSFNTLYNFS-VGRDMYLGMSALLLFTVFGGSLLSWLIFPTPVCVyLPLGLKLLTILVVLLGLYLGYF 471
Cdd:MTH00208 449 SFRIIFFCFLNNPSFSPLSPISeENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFS 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 472 LSLScvnLSSMCSSSFFLDFLSLMWFMpllsTKLVGGIILTMGGKYYSF-----LDHGWLEYYGAQGLYGFFIY------ 540
Cdd:MTH00208 528 FLLS---LSSNPINSNFFSFLSNQWFF----VNISHSIIISFSFFTSLFgstrtLDRGWSENIGPQGIGNTSSTlsksyq 600
|
570
....*....|....
gi 1275874120 541 -----FIKQYLGLF 549
Cdd:MTH00208 601 ltqtgYIKQYLLSS 614
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
9-398 |
6.13e-84 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 273.39 E-value: 6.13e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 9 SLFFLVCGFISFLVSLVFMLYDVSYlieWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRF 88
Cdd:TIGR01974 40 SAALSAFVFVDFFLNGEGEAFTQSL---FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRF 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 89 IILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLN-FGSWN 166
Cdd:TIGR01974 117 FAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLN 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 167 Y--IYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LFSSKM 243
Cdd:TIGR01974 197 FqeVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLfELSPTA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 244 NFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDN 323
Cdd:TIGR01974 277 LYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHE 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1275874120 324 QDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:TIGR01974 357 QDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIF 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
17-534 |
2.11e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 269.42 E-value: 2.11e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 17 FISFLVSLVFMLYDVSYLI-EWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLF 95
Cdd:MTH00108 45 IISLIPTMMFIHSGQEMIIsNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 96 VLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRIGDVFILLSISW-MLNFGSWNYiyyYDY 173
Cdd:MTH00108 125 LITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDL---QQI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 174 FFHSYDYSIVCLM-VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMnfILLLIGC 252
Cdd:MTH00108 202 FMLNPNNSNLPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKT--IQTLTLC 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 253 L----TMFMSgVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRS 328
Cdd:MTH00108 280 LgaitTLFTA-ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRK 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 329 MGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFN 408
Cdd:MTH00108 359 MGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFP 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 409 TLYNFSVGRDMYLG-MSALLLFTVFGGSLLSWLIFPTPVCVY-LPLGLKLLTILVVLLGLYLGYFLSLSCVNLSSMCSSS 486
Cdd:MTH00108 439 PLITINENNPLLINpIKRLLLGSIFAGFLISNNIPPTTIPQMtMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSN 518
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 1275874120 487 FFLdFLSLMWFMPLLSTKLVGGIILTMGGKYYSFL-DHGWLEYYGAQGL 534
Cdd:MTH00108 519 TFK-FSNMLGYFPTIMHRLPPYMNLTMSQKLASMLlDLIWLEKILPKTI 566
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
53-410 |
1.18e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 254.37 E-value: 1.18e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 53 FDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNV 132
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 133 KSVNAGLLTA-LSNRIGDVFILLSISWML-NFGSWNyIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAA 210
Cdd:MTH00137 166 ADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEG 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 211 PTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNF-ILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGV 289
Cdd:MTH00137 245 PTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALtTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 290 GYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVC 369
Cdd:MTH00137 325 NQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEAL 404
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1275874120 370 SFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFNTL 410
Cdd:MTH00137 405 NTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPL 445
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
50-403 |
3.89e-76 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 253.08 E-value: 3.89e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 50 GVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IY 128
Cdd:MTH00020 75 GLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 129 YQNVKSVNAGLLTALSNRIGDVFILLSISWMLN-FGSWNY--IYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLP 205
Cdd:MTH00020 155 LTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-FSSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:MTH00020 235 DAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFeQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 285 GVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDL 364
Cdd:MTH00020 315 VACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDL 394
|
330 340 350
....*....|....*....|....*....|....*....
gi 1275874120 365 ILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLIN 403
Cdd:MTH00020 395 ILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLS 433
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
8-402 |
3.07e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 239.91 E-value: 3.07e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 8 SSLFFLVCGFISFLVSLvFMLYD------VSYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSS 81
Cdd:MTH00210 28 AGILTSSCIVISAIVSC-CIFYEttlngsATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 82 DLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRIGDVFILLSISWML 160
Cdd:MTH00210 107 DPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMIL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 161 N-FGSWNYIYYYDYFFHSYDYS---IVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP 236
Cdd:MTH00210 187 KeFGTLEFSTISSLLVTNINKEsltIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 237 MLFSSKMNFILL-LIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGC 315
Cdd:MTH00210 267 LFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 316 YIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFR 395
Cdd:MTH00210 347 VIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIR 426
|
....*..
gi 1275874120 396 LLYYSLI 402
Cdd:MTH00210 427 LIYLTFI 433
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
31-396 |
1.88e-65 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 225.67 E-value: 1.88e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 31 VSYLIEWEiyAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVS 110
Cdd:PRK07376 69 YERLFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 111 ILLGWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRIGDVFILLSI---SWMLnfGSWNYIYYYDYFFHSYDYSIV--- 183
Cdd:PRK07376 147 IYVFWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWAT--GSFDFDGIADRLSELVSSGAVsgw 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 184 -----CLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML--FSSKMNFILLlIGCLTMF 256
Cdd:PRK07376 225 lalllCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFeqFPAVMTVIAW-TGAITAF 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 257 MSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLD--------NQDIRS 328
Cdd:PRK07376 304 LGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRL 383
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1275874120 329 MGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFScmNYFIYFLFFFSTGLTASYSFRL 396
Cdd:PRK07376 384 MGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRM 449
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
17-415 |
5.01e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 221.33 E-value: 5.01e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 17 FISFLVSLVFMLYDVSYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFV 96
Cdd:MTH00095 7 LILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 97 LSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWMLNFGswnyiyyYDYFFH 176
Cdd:MTH00095 87 GSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 177 SYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNFILLLIGCLTMF 256
Cdd:MTH00095 160 SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMF 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 257 MSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGSLTLNM 336
Cdd:MTH00095 240 FSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLP 319
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1275874120 337 PYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFNTLYNFSV 415
Cdd:MTH00095 320 MFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSV 398
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
7-534 |
1.35e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 204.42 E-value: 1.35e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 7 LSSLFFLVCGFISFLVSLVFMLYDVsyLIEWEIYAINSSVIVM---GVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDL 83
Cdd:MTH00032 31 LSTICMGSSTLIALFLAYEVLINDA--VVHIELYKWIESEIFIthiGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 84 NSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTAL-SNRIGDVFILLSISWM--- 159
Cdd:MTH00032 109 HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIvVNRVGDVGVILGMVLIykt 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 160 ---LNFGSWN------------YIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLV 224
Cdd:MTH00032 189 igsLDFLTFNggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 225 TAGVYLLIRFSPMLFSSKMNFILLLI-GCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGV-GYPLLSFFHLLTH 302
Cdd:MTH00032 269 TAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 303 ALFKSLLFLCAGCYIHGM-LDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVcSFSCMNY----- 376
Cdd:MTH00032 349 AFFKALLFLSAGSVIHSTtVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL-TYSGRNMgipfg 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 377 --------------------------------FIYFLFFFSTGLTASYSFRLLYYSLI-----NLFSFNTLYNFSVGRDM 419
Cdd:MTH00032 428 ssllkiqgdigikkddrgsiggpegypsrgsaFAFWLGTVAALLTAFYSIRLVYITFIispnsPKESLISSHINIVDKRV 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 420 YLGMSALLLFTVFGGSLLSWL---------------IFPTPVCVYlPLGLKLLTILVVLLGLYLGYFLSLSCVNLSSMCS 484
Cdd:MTH00032 508 LTVLSLLCFGAIFVGYLIQDIligdiehpivpplikVMPTLMGLF-GMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYS 586
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1275874120 485 ssffldFLSLMWFMPLLSTKLVGGIILTMGG-KYYSFLDHGWLEYYGAQGL 534
Cdd:MTH00032 587 ------FLGGAWQGDHLINKLVAIPLFSFGHwGIYKTLDRGWLELFGPQGI 631
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
54-367 |
1.29e-49 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 184.86 E-value: 1.29e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIyyQNVK 133
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGS 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 134 SVNAGLL-TALSNRIGDVFILL------------SISWMLNFGSWNYiyyydyffHSYDYSIVCLMVMFAGMTKSAQIPF 200
Cdd:PRK12650 156 GGEAGSIrTLILTFFGGLTLLAavaiaatqtgttSLSGILHSDVWAE--------KPGLTTVVAVLIAVAAFTKSAQFPF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 201 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLFSSKMNFILLLIGC--LTMFMSGVAANYEFDLKKIIALSTLS 278
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFHDVAVWNWLLIIVgmITALMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 279 QLGLMMGVLGVGYPL---LSFFHLLTHALFKSLLFLCAgcyihGMLDNQ----DIRSMGSLTLNMPYTSACLNVANLSLC 351
Cdd:PRK12650 307 QLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLI-----GVVDHQagtrDIRRLGSLWRRMPFTFVSVTIAALSMA 381
|
330
....*....|....*.
gi 1275874120 352 GFPFLSGFYSKDLILE 367
Cdd:PRK12650 382 AVPPLFGFVSKEGMLT 397
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-386 |
2.60e-48 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 169.80 E-value: 2.60e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 105 SPNLVSILLGWDGLGLVSYCLVIYY-QNVKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYIYYYDYFFH----SYD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTgglnSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 180 YSIVCLMVMFAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFSS--KMNFILLLIGCLTMF 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 257 MSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPL---LSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGSLT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1275874120 334 LNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEvCSFSCMNYFIYFLFFFST 386
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA-AAVAASWIFLVLAGVVGS 291
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
33-395 |
1.36e-47 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 177.39 E-value: 1.36e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 33 YLIEWEIYaiNSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSIL 112
Cdd:CHL00025 71 YLWSWTIN--NDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 113 LGWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRIGDVFILLSIS---WMLnfGSWNYIYYYDYFFHSYDYS------- 181
Cdd:CHL00025 149 IFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfyWIT--GSFEFRDLFEIFNNLIYNNevnllfa 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 182 IVCLMVMFAG-MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM--LFSSKMNFIlLLIGCLTMFMS 258
Cdd:CHL00025 227 TLCAFLLFLGpVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiVIPYIMNLI-SLIGIITALLG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 259 GVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGM--------LDNQDIRSMG 330
Cdd:CHL00025 306 ATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMG 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 331 SLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEvcsfscmNYFIYFLFF-----FSTGLTASYSFR 395
Cdd:CHL00025 386 GLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN-------DSWLYSPIFaiiawSTAGLTAFYMFR 448
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
54-399 |
3.53e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 168.02 E-value: 3.53e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 134 SVNAGLLTALSNRIGDVFILLSISWM-LNFGSWNY--IYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMA- 209
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMadLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPa 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 210 APTPVSALVhSSTLVTAGVYLLIRFSPMLFSSK----MNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMG 285
Cdd:COG0651 235 APSPVSALL-SGLLTKVGVYAILRVLTLLFGADpalfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 286 VLGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSK 362
Cdd:COG0651 314 GLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSK 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 1275874120 363 DLILEVcSFSCMNYFIYFLFFFSTGLTASYSFRLLYY 399
Cdd:COG0651 393 WLLLQA-ALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
49-367 |
5.16e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 161.24 E-value: 5.16e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 49 MGVLFDWM----SLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYC 124
Cdd:PRK12647 54 LGVNLSFLldglSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 125 LVIY-YQNVKSVNAGLLTALSNRIGDV-----FILL-------SISWMLNFGswnyiyyyDYFFHSYDYSIVCLMVMFAG 191
Cdd:PRK12647 134 LIGFnHEREAARRAALQALLVTGGGGLallagLILLgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 192 MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKM-NFILLLIGCLTMFMSGVAANYEFDLKK 270
Cdd:PRK12647 206 FTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwQTILPLFGGLTMLTGALLAVRQTDLKL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 271 IIALSTLSQLGLMMGVLGVGYPLL---SFFHLLTHALFKSLLFLCAgcyihGMLDNQ----DIRSMGSLTLNMPYTSACL 343
Cdd:PRK12647 286 ILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVA-----GIIDHEtgtrDITKLGGLRRAMPITAAAA 360
|
330 340
....*....|....*....|....
gi 1275874120 344 NVANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12647 361 LLAALSMAGLPPLFGFLAKELIYE 384
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-367 |
7.96e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 157.99 E-value: 7.96e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDL-NSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY-YQN 131
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYNN 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 132 VKSVNAGLLTALSNRIGDVFILLSISWMLNFGSWNYIY----YYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK12646 157 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 208 MAAPTPVSALVHSSTLVTAGVYLLIRFSPML-FSSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGV 286
Cdd:PRK12646 237 MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAM 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 287 LGVG--------------YPLLSF---FHLLTHALFKSLLFLCAGCYIHGMlDNQDIRSMGSLTLNMPYTSACLNVANLS 349
Cdd:PRK12646 317 VGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLFPKMNLVMTIAALS 395
|
330
....*....|....*...
gi 1275874120 350 LCGFPFLSGFYSKDLILE 367
Cdd:PRK12646 396 MAGVPFLNGFLSKEMFLD 413
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
12-397 |
1.10e-40 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 154.65 E-value: 1.10e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 12 FLVCGFISFLVSLVFMLYDVSYLIEWEIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIIL 91
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 92 VSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWmlnfgswnyiyyy 171
Cdd:MTH00063 82 IVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL------------- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 172 dYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNFILLLIG 251
Cdd:MTH00063 149 -SCWGGSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 252 CLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGS 331
Cdd:MTH00063 228 LLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYS 307
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874120 332 LTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLL 397
Cdd:MTH00063 308 SILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC 373
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
51-367 |
1.10e-39 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 154.62 E-value: 1.10e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 51 VLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYY- 129
Cdd:TIGR00940 71 LYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWh 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 130 QNVKSVNAGLLTALSNRIGDVFILLSISWML----NFGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLP 205
Cdd:TIGR00940 151 HRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNF-ILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:TIGR00940 231 DAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFwIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIM 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 285 GVLGVGYPLLSF----------------FHLLTHALFKSLLFLCAGCYIHGMlDNQDIRSMGSLTLNMPYTSACLNVANL 348
Cdd:TIGR00940 311 VLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHET-GTRDIRKLGGLFHIMPITFTLAMIASA 389
|
330
....*....|....*....
gi 1275874120 349 SLCGFPFLSGFYSKDLILE 367
Cdd:TIGR00940 390 AMAGVPPFNGFLSKEMFFA 408
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-398 |
2.10e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 151.11 E-value: 2.10e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 134 SVNAGLLTALS-------NRIGDVFILLSISwmlnfGSwnyiYYYDYFFHSYD-------YSIVCLMVMFAGMTKSAQIP 199
Cdd:PRK12648 155 DARRGARMALTvtgagglALLAGVLLLGHIV-----GS----YDLDVVLAAGDlirahplYPPALVLILLGAFTKSAQFP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNFILL-LIGCLTMFMSGVAANYEFDLKKIIALSTLS 278
Cdd:PRK12648 226 FHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVgGAGLITLLLGAYFALFQHDLKGLLAYSTIS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 279 QLGLMMGVLGVGYPL---LSFFHLLTHALFKSLLFLCAgcyihGMLDNQ----DIRSMGSLTLNMPYTSACLNVANLSLC 351
Cdd:PRK12648 306 HLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAA-----GIIDHEtgtrDMRRLSGLRRLMPITATLAMVAAAAMA 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1275874120 352 GFPFLSGFYSKDL----ILEVCSFSCMNYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:PRK12648 381 GVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIH 431
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
45-366 |
1.06e-36 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 142.42 E-value: 1.06e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 45 SVIVMGVLFDWMSLIfMGFVFI-ISSMVLFYSSDYMS-------SDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWD 116
Cdd:PRK06525 65 DVALFGLVIDPVSVL-IGFVVVlLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 117 GLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISWM-LNFGSWNYIYYYDyfFHSYDYSIVCLMVMFAGMTKS 195
Cdd:PRK06525 144 ITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQTGTFALSALSG--LHGSLKYLVFLGILFAAWGKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 196 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspMLFSSKM----NFILLLIGCLTMFMSGVAANYEFDLKKI 271
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIphviGYVGAVMAIVTLLYGFLMYLPQQDMKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 272 IALSTLSQLGLMmgVLGVGYPLL--------SFFHLLTHALFKSLLFLCAGC--YIHGMLDNQDIRSMGSLtlnMPYTSA 341
Cdd:PRK06525 300 LAYSTITQLGYM--FFGLSLAILgsrlalegSIAYIFNHAFAKSLFFLVAGAlsYSCGTRLLPRLRGVLKK---LPLVGV 374
|
330 340
....*....|....*....|....*
gi 1275874120 342 CLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06525 375 GFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-367 |
2.19e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 145.07 E-value: 2.19e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 56 MSLIFMGfvfiISSMVLFYSSDYMSSDL-NSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKS 134
Cdd:PRK12644 79 MSLLVLG----VGALVLLYCARYFDDDEpRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 135 -----VNAGLLTA---LSNRIGdvFILL-------SISWMLNFgSWNYIYYydyffhsyDYSIVCLMVmfAGMTKSAQIP 199
Cdd:PRK12644 155 srraaLQALLVTTaggLAMLVG--IIILgqaagtyRLSELLAD-PPTGPAV--------SVAVVLILV--GALSKSAIVP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-FSSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLS 278
Cdd:PRK12644 222 FHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 279 QLGLMMGVLGVGYP---LLSFFHLLTHALFKSLLFLcagcyIHGMLDNQ----DIRSMGSLTLNMPYTSACLNVANLSLC 351
Cdd:PRK12644 302 QLGFLTVLVGIGTRdaaLAGLAMLLAHALFKAALFL-----VVGIIDHStgtrDIRKLSGLGRRQPVLAVVAALAAASMA 376
|
330
....*....|....*.
gi 1275874120 352 GFPFLSGFYSKDLILE 367
Cdd:PRK12644 377 GLPPLLGFVAKEAALE 392
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
5.50e-34 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 137.36 E-value: 5.50e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLNS-DRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY-YQN 131
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwYER 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 132 VKSVNAGLLTALSNRIGDV-----FILLSISwmlnFGSWN---YIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAW 203
Cdd:PRK12645 157 EASRYGAQKSMLITVFGGLsmlggFILLYIM----TGSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNF-ILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGL 282
Cdd:PRK12645 233 LPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFwTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 283 MMGVLGVGYPLLSF----------------FHLLTHALFKSLLFLCAGCYIHGMlDNQDIRSMGSLTLNMPYTSACLNVA 346
Cdd:PRK12645 313 IMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIMPITFTIALIG 391
|
330 340
....*....|....*....|.
gi 1275874120 347 NLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12645 392 ALSMAGLPPFNGFLSKEMFFE 412
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
3.38e-32 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 132.26 E-value: 3.38e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQN-- 131
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHrp 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 132 ---VKSVNAGLLTALSNRI--GDVFILLSISWMLNFGSWNYIYYYDYFFHSYDYSIVCLMVMFAGM-TKSAQIPFSAWLP 205
Cdd:PRK12649 159 esvYGATKSLLITAGGGLFmfAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIGAaAKSAQGPFYIWLP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNFILLL-IGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:PRK12649 239 NAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLM 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 285 GVLGVG---YPLLSF----FHLLTHALFKSLLFLCAGCYIHGMLdNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLS 357
Cdd:PRK12649 319 TMYGYTtyhEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLN 397
|
330
....*....|
gi 1275874120 358 GFYSKDLILE 367
Cdd:PRK12649 398 GFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-399 |
9.33e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 116.52 E-value: 9.33e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSsdYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 134 SVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPT 212
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 213 PVSALVHSSTLVTAGVYLLIRFSPMLF------SSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGV 286
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYFTVFggdfrfALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLG 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 287 LGVGYPLL---SFFHLLTHALFKSLLFLCAGC--YIHGmldNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYS 361
Cdd:PRK08375 314 LALLTPLAlaaGLLHLLHHALMKGALFLAAGAieVTYG---TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVS 390
|
330 340 350
....*....|....*....|....*....|....*...
gi 1275874120 362 KDLILeVCSFSCMNYFIYFLFFFSTGLTASYSFRLLYY 399
Cdd:PRK08375 391 KWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
53-367 |
9.44e-28 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 117.91 E-value: 9.44e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 53 FDWMSLIFMGFVFIISSMVLFYSSDY---MSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY- 128
Cdd:PRK08667 75 IDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNd 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 129 YQNVKSVNAGLLTALSNRIGDVFILLSISWM-LNFGSWNYIYYYdyfFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK08667 155 YQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 208 M-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFSSKM--NFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:PRK08667 232 HpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 285 GVLGV-------GYPLLSF-------FHLLTHALFKSLLFLCAGCYIHGMLDnQDIRSMGSLTLNMPYTSACLNVANLSL 350
Cdd:PRK08667 311 MGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSI 389
|
330
....*....|....*..
gi 1275874120 351 CGFPFLSGFYSKDLILE 367
Cdd:PRK08667 390 AALPPFNGFASELLLYE 406
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-388 |
3.68e-24 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 106.90 E-value: 3.68e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 94 LFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSV-NAGLLTALSNRIGDVFILLSISWMlnfgsWNYIyyyd 172
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIrRAGFLYLLMAHAGALAILLAFGLL-----ARES---- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 173 yffHSYDY-------------SIVCLMVMFAGMTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML 238
Cdd:PRK06521 192 ---GSYDFaamraahlspfwaSLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 239 FSSKM---NFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGV-------GYPLLS-------FFHLLT 301
Cdd:PRK06521 268 LGAPGwwwGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAalaltaaLYHLLN 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 302 HALFKSLLFLCAGCYIHGMlDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKdlilevcsfscmnYFIYFL 381
Cdd:PRK06521 348 HALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE-------------WLLLQS 413
|
....*..
gi 1275874120 382 FFFSTGL 388
Cdd:PRK06521 414 LLSSPGL 420
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
7.02e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 105.17 E-value: 7.02e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 56 MSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKsv 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 136 nAGLLTA----LSNRIGDVFILLSIS-WMLNFGSWN----YIYYYDYFFHSYDYSIVCLMVMfAGMTKSAQIPFSAWLPA 206
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSlsalWAHLAAQGASPSLQAAALLLVL-AVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 207 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLFSSKM-NFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMG 285
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPaRWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260
....*....|....*....|....*....
gi 1275874120 286 VLGVGYPLLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-441 |
1.05e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 104.79 E-value: 1.05e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNV- 132
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 133 KSVNAGLLTALSNRIGDVFILLSISWML-NFGSWNYIYY-YDYFFHSYDYSIVCLMVMFAGMT-KSAQIPFSAWLPAAM- 208
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLaVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 209 AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLFSSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLM 283
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 284 MGVLGVGYPLLS---------------FFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRSMGSLTLNMPYTSACLNVANL 348
Cdd:PRK08376 327 LLGLGVGLAALGdpamasygeialaggIYHIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 349 SLCGFPFLSGFYSKDLILEvcSFSCMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFNTLYNFSVGRDMYLGMsALLL 428
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPM-LILA 482
|
410
....*....|...
gi 1275874120 429 FTVFGGSLLSWLI 441
Cdd:PRK08376 483 IAIIGMGLFPWQI 495
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-398 |
4.75e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 102.74 E-value: 4.75e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 134 -SVNAGLLTALSNRIGDVFILLSISWMLN-FGSWNYI----------------YYYDYFFHSYdysIVCLMVMFAGMTKS 195
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNMAdlsakirglsfpltggLAGNPPLALG---VALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 196 AQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFSSKMN---------FILLLIGCLTMFMSGVAANYE 265
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSlidfraalsPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 266 FDLKKIIALSTLSQLGLMMGVLGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRSMGSLTLNMPYTSAC 342
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874120 343 LNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFFFSTgLTASYSFRLLY 398
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-556 |
3.80e-21 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 91.07 E-value: 3.80e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 392 YSFRLLYYSLINLFSFNTLYNFSV-GRDMYLGMSALLLFTVFGGSLLSWLIFPTPVCVYLPLGLKLLTILVVLLGLYLGY 470
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINEnNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 471 FLSLSCVNLSSMCSSSFFLDFLSLMWFMPLLSTKLVGGIILTMGGKYYSFLDHGWLEYYGAQGLYGFFIYFIKQYLGLFD 550
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
....*.
gi 1275874120 551 YNFKTY 556
Cdd:pfam06455 161 GLIKIY 166
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
10-398 |
4.41e-20 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 93.91 E-value: 4.41e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 10 LFFLVCGFISFLVS-------LVFMLYDVSYLIEW---------EIYAINSSVIVMGVLFDWMSLIFMGFVFIISSMVLF 73
Cdd:PRK08668 8 LTPLIGSVLAYLLKkinekigVIGNALPLLFLIKLyftlkvgtgEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 74 YSSDYMSSdlNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYcLVIYYQNVKSVNAGLLTALSNRIGDVFIL 153
Cdd:PRK08668 88 FMVSEKTK--NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAML 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 154 LSISWMLN-FGSWNYIYYYDYFFH--SYDYS-IVCLMVMFAGMTKSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGV 228
Cdd:PRK08668 165 YAIFLIYAkTGTFDFADISQGLINdtSTGFAlIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 229 YLLIRFSPMLFSSKM-------------NFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLL- 294
Cdd:PRK08668 244 YGFLLVLYVLPGTKLfsefgtyrgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGf 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 295 --SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFS 372
Cdd:PRK08668 324 agGLFHVFNHALFKGLFFLIFAAVIY-RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISK 402
|
410 420
....*....|....*....|....*.
gi 1275874120 373 CMnYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:PRK08668 403 GM-PITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-398 |
4.42e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 93.34 E-value: 4.42e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 58 LIFMGFVFIISSMVLFYSSDYMSSDL--NSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSV 135
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 136 NAGLlTALSNRIGDVFILLSISWMLNFGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVS 215
Cdd:PRK06589 166 SGGY-KYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 216 ALVHSSTLVTAGVYLLIRFSPMLFS-------SKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLG 288
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYIFGlsylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 289 VGYPL---LSFFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLI 365
Cdd:PRK06589 325 ILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLI 403
|
330 340 350
....*....|....*....|....*....|....*.
gi 1275874120 366 LEVCSFS---CMNYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:PRK06589 404 LLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
57-361 |
7.73e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 93.44 E-value: 7.73e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 57 SLIFMGFVFIISSMVLF---YSSDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK07390 88 SPVTLGALELITGLSLLaqiYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQP 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 134 SVNAGLLTA-LSNRIGDVFILLSISWMLNF-GSWNYIYYYDYF----FHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK07390 168 LVVTAARDAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 208 MAAPTPVSALvHSSTLVTAGVYLLIRFSPML-FSSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGV 286
Cdd:PRK07390 248 MEGPNPASIL-RNSVVVATGAWVLIKLQPVLaLSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIA 326
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1275874120 287 LGVGYPLLSFFHLLTHALFKSLLFLCAGCYIHGMLdNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYS 361
Cdd:PRK07390 327 VGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTI-TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-367 |
1.36e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 91.94 E-value: 1.36e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 193 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMnfILLLIGCLTMFMSGVAANYEFDLKKII 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLEKDLKRML 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 273 ALSTLSQLGLMmgvlgVGYPLLSFFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRSMGSLTLNMPYTSACLNVAnlslcG 352
Cdd:PRK07234 274 AFSTISQLGFI-----LAAPLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSIA-----G 342
|
170
....*....|....*
gi 1275874120 353 FPFLSGFYSKDLILE 367
Cdd:PRK07234 343 FPLLAGFVSKVLTLK 357
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
182-398 |
4.11e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 90.60 E-value: 4.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 182 IVCLMVMFAGMTKSAQI-PFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFS----SKMNFILLLIGCLTM 255
Cdd:PRK08377 206 QVGLALLIFGLAVEAELfPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNangwSSVLKLVIIMATLTV 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 256 FMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPL---LSFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRSMGSL 332
Cdd:PRK08377 285 FFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVG-YVGITLGGTEIEKFEGL 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874120 333 TLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILeVCSFSCMNYFIYFLFFFSTGLTASYSFRLLY 398
Cdd:PRK08377 364 GKRMPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLIH 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
51-362 |
2.03e-16 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 82.09 E-value: 2.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 51 VLFDWMSLIFMGFVFIISSMVLFYSSDYMS-SDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLV-IY 128
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLErRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 129 YQNVKSVNAGL----LTALSNrigdVFILLSISWMLNF-GSWNYIYYYDYFFHSYDYSIVCLMV---MFAGMT-KSAQIP 199
Cdd:COG1007 146 RDDRRSSEAALkyflLGALSS----GFLLYGISLLYGAtGSLNLAGIAAALAAGGANSPLLLLGlvlVLAGLAfKLSAVP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 200 FSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSPMLF---SSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIAL 274
Cdd:COG1007 222 FHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFpglAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 275 STLSQLG-LMMGVLGVGYPLLS--FFHLLTHALFKSLLFLCAGCYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLC 351
Cdd:COG1007 300 SSIAHAGyLLLGLAAGTPLGVSaaLFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLA 379
|
330
....*....|.
gi 1275874120 352 GFPFLSGFYSK 362
Cdd:COG1007 380 GIPPTAGFFGK 390
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-366 |
3.71e-15 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 78.40 E-value: 3.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 108 LVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISW-MLNFGSWNYIYYYDYffhsydYSIVCLM 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAFGAIAGL------GGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 187 VMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfsskmNFILLLIGCLTMFMSGVAANYEF 266
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPG------TELLIYIGAAMAVYGVFFALLEN 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 267 DLKKIIALSTLSQLGLMMGVLGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRSMGSLTLNMPYTSACL 343
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALFC 341
|
250 260
....*....|....*....|...
gi 1275874120 344 NVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
185-314 |
2.11e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 75.84 E-value: 2.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 185 LMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLFSSKMNFILLLIGCLTMFMSGVAANY 264
Cdd:PRK08601 208 LLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLV 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1275874120 265 EFDLKKIIALSTLSQLGLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08601 287 QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-405 |
8.99e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.83 E-value: 8.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 181 SIVCLMVMFAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFSSKMNF---ILLLIGCLTMF 256
Cdd:PRK07691 209 TVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTII 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 257 MSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRSMGSLT 333
Cdd:PRK07691 288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLI 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1275874120 334 LNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEvCSFSCMNYFIYFLFFFSTGLTasysfrllYYSLINLF 405
Cdd:PRK07691 367 KRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLV--------LYSVIKIF 429
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
147-397 |
1.06e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 73.58 E-value: 1.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 147 IGDVFILLSISWMlnfGSWNYIYYYDYF-FHSYDYSIVCLMVMFAGM-----TKSAQIPFSAWLP-AAMAAPTPVSALvH 219
Cdd:COG1008 172 AGSLLMLVAILAL---YFLAGALTFDIAeLAAAPLPLTAQLLLFLAFfiafaVKVPMFPFHTWLPdAHVEAPTAGSVL-L 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 220 SSTLVTAGVYLLIRFSPMLF---SSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMM---------GVL 287
Cdd:COG1008 248 AGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLlgifalnplGLQ 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 288 GvgypllSFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILe 367
Cdd:COG1008 328 G------AVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL- 399
|
250 260 270
....*....|....*....|....*....|..
gi 1275874120 368 vcsFSCMNYFIYFLFF--FSTGLTASYSFRLL 397
Cdd:COG1008 400 ---LGAFQVNPWLAILaaLGLILTAAYLLWMY 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
182-366 |
4.36e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.52 E-value: 4.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 182 IVCLMVMFAGMTKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF---SSKMNFILLLIGCLTMFMS 258
Cdd:PRK12663 208 TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFpqeRELLHPLLATMAAITMVIG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 259 GVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIhGMLDNQDIRSMGSLTLN 335
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRK 365
|
170 180 190
....*....|....*....|....*....|.
gi 1275874120 336 MPYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
1.26e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 67.16 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 198 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLFSSKM--NFILLLIGCLTMFMSGVAANYEFDLKKIIAL 274
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLwwGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 275 STLSQLGLMM-----GVLGV--GYPLL-------SFFHLLTHALFKSLLFLCAGCYIHgMLDNQDIRSMGSLTLNMPYTS 340
Cdd:PRK08042 276 HTLENIGIILlglgaGVTGIalEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 1275874120 341 ACLNVANLSLCGFPFLSGF 359
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
193-366 |
1.77e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.49 E-value: 1.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 193 TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLFSSKMN----FILLLIGCLTMFMSGVAANYEFD 267
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 268 LKKIIALSTLSQLGLMMGVLGVGYPLLSF---FHLLTHALFKSLLFlCAGCYIHGMLDNQDIRSMGSLTLNMPYTSACLN 344
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180
....*....|....*....|..
gi 1275874120 345 VANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
6-362 |
3.78e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 65.61 E-value: 3.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 6 YLSSLFFLVCGFISFLVSLVFMLYDVSyliewEIYAINSSVIVmgvlfDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNS 85
Cdd:PRK05777 34 HSRRATLAVLALLLALVALLFVLGAAG-----GGTAFGGMLVV-----DGFALFLKGLILLASLLALLLARPYLEDRGRG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 86 DrFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIY-YQNVKSVNAGL----LTALSNrigdVFILLSISWML 160
Cdd:PRK05777 104 E-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALrRDRRRSLEAAIkyfvLGALAS----GFLLYGMSLLY 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 161 NF-GSWNYIYYYDYFFHSYDYSIVCLM---VMFAGMT-KSAQIPFSAWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRF 234
Cdd:PRK05777 179 GAtGSLSFAGIAKALADGSGNSLLLLFglvFLLVGLAfKLSAVPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 235 SPMLFSS---KMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLG-LMMGVLGVGYPLLS--FFHLLTHALFKSL 308
Cdd:PRK05777 258 LVVAFGGlseDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGyLLVGLAAGTAEGYSavLFYLLAYLFMTLG 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1275874120 309 LFLCAGCYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSK 362
Cdd:PRK05777 338 AFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
188-366 |
1.18e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.01 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 188 MFAGM-TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLFSS----KMNFILLLIGCLTMFMSGVA 261
Cdd:PRK08676 212 IFIGFlAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaeQFSNVLIGLGIFSIAVAAFS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 262 ANYEFDLKKIIALSTLSQLGLMMGVLGVGYPLLSF---FHLLTHALFKSLLFLCAGCyIHGMLDNQDIRSMGSLTLNMPY 338
Cdd:PRK08676 291 MLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPV 369
|
170 180
....*....|....*....|....*...
gi 1275874120 339 TSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK08676 370 AAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-367 |
4.15e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 62.29 E-value: 4.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 185 LMVMFAGMTKSAQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLFSS-KMNFILLLIGCLTMFMSGVAA 262
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGgGLDTLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 263 NYEFDLKKIIALSTLSQLGLMMGVLGVGYPL-LS--FFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRSMGSLTLNMPYT 339
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLL 370
|
170 180
....*....|....*....|....*...
gi 1275874120 340 SACLNVANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-368 |
1.88e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.13 E-value: 1.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 52 LFDWMSLIFMGFVFIISSMVLFYSSdymSSDLNSDRFIILVSLFVLS---MMFLIISPNLVSILLGWDGLGLVSYCLVIY 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPN---RKEISVNKIPSFYSAFLLClggLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 129 YQNVKSVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFHSYDYSIV---CLMVMFAGMTKSAQIPFSAWL 204
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAItGTLNMGDMFLIIQDLPTNRAIqigVLFIMVGLFIKAALFPFHKWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 205 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNFILLLIGCLTMFMSGVA-------ANYEFDLKKIIALSTL 277
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAivfgsvlAILSKDIKRIFAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 278 SQLGLMMGVLGVG--YPLLS-FFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFP 354
Cdd:PRK12662 313 SHIGYIILAVSLNtyYGLAAaVAYIVNHSIVKSALFMVSGS-ISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMP 391
|
330
....*....|....
gi 1275874120 355 FLSGFYSKDLILEV 368
Cdd:PRK12662 392 PTSGFVAKWYILDA 405
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-362 |
2.61e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 59.63 E-value: 2.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 54 DWMSLIFMGFVFIISSMVLFYSSDYM-SSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 132 VKSVNAGLLTALSNRIGDVFILLSISWM--LNFGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMT-----KSAQIPFSAWL 204
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 205 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFSSKMN---FILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQL 280
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 281 GLMMGVLGVGYPLLSFFHLLTHALFKSLLFLCA-GCYI-HGMLDNQD-IRSMGSLTLNMPYTSACLNVANLSLCGFPFLS 357
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTfACIVlFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLA 396
|
....*
gi 1275874120 358 GFYSK 362
Cdd:CHL00049 397 GFFGK 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
148-397 |
8.66e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.03 E-value: 8.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 148 GDVFILLSISWM--LNFGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLV 224
Cdd:TIGR01972 168 GSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 225 TAGVYLLIRFSPMLFSSKMNFILLLIGCL---TMFMSGVAANYEFDLKKIIALSTLSQLGLMM---------GVLGvgyp 292
Cdd:TIGR01972 247 KMGTYGFLRFNLPLFPDASLYFAPVLAALgviAIIYGALIALAQTDIKRLIAYSSISHMGFVLlgifsfnelGISG---- 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 293 llSFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILeVCSFS 372
Cdd:TIGR01972 323 --AVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL-LGSFK 398
|
250 260
....*....|....*....|....*
gi 1275874120 373 cMNYFIYFLFFFSTGLTASYSFRLL 397
Cdd:TIGR01972 399 -VNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-314 |
5.87e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 55.57 E-value: 5.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 60 FMGFVFIISSMVLFYSSDYMSSDLNSDRFI-ILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 139 LLTalsnrigdvFILLSISWMLNFGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPF--SAWLPAAMA-APTPVS 215
Cdd:PRK06459 125 FMA---------FGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 216 AlVHSSTLVTAGVYLLIRFSPMLFSSKMNFI---LLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGV--- 289
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270
....*....|....*....|....*....|....*
gi 1275874120 290 ---------GYPLLS-FFHLLTHALFKSLLFLCAG 314
Cdd:PRK06459 275 tkqlitsieHFSLITvILYSFAHSVAKTGLFLSSG 309
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
143-366 |
1.73e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.05 E-value: 1.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 143 LSNRIGDVFILLSISWM-----LNFGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMA-APTPVSA 216
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 217 LvHSSTLVTAGVYLLIRFSPMLF---SSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGYPL 293
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSLPLFpdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQL 326
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1275874120 294 L---SFFHLLTHALFKSLLFLCAGcYIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK05846 327 GiqgAIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
52-367 |
2.32e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.50 E-value: 2.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 52 LFDWMSLIFMGFVFIISSMVLFyssDYMSSDLNSDRFIILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK06277 69 LFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGT 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 132 VKSVNAGLLTALSNRIGDVFILLSISWMLNF-GSWNYIYYYDYFFHSYDYSIV---CLMVMFAGMTKSAQIPFSAWLPAA 207
Cdd:PRK06277 146 EEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNITDIHNALLVNPTSPVIyggLLLLIFGLLYGSGLPPFHTIKSDI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 208 MAAPTP-VSALVHSS---TLVTAGVYLLIRFSPMLFSSKMNFILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLM 283
Cdd:PRK06277 226 YAKAKPfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 284 MGVLGVGYPL---LSFFHLLTHALFKSLLFLCAGCyIHGMLDNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFY 360
Cdd:PRK06277 306 AAGLALGTPLgivAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQ 384
|
....*..
gi 1275874120 361 SKDLILE 367
Cdd:PRK06277 385 SKLMLAQ 391
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-442 |
2.77e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.11 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 89 IILVSLFVLSMMFLIISPNLVSILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRIGDVFILLSISwmlnfgswnyi 168
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGAS----------- 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 169 yyydYFFHSYDYSIVCLMVMFAGM-TKSAQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLFSSKMNFIL 247
Cdd:PRK12664 135 ----GQAQNGQYTGYCKLLFMLGLlINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEIL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 248 LLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMM------GVLGVGYPLLsFFHLLTHALFKSLLFLCAGCYIHGMl 321
Cdd:PRK12664 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIiaigfsGSSGVAIGIL-ILQIVLSVVYQTLLFMVADSVINRT- 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 322 DNQDIRSMGSLtLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILEVCSFSCMNYFIYFLFF--FSTGLTASYSFRLLYY 399
Cdd:PRK12664 283 RKFNLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWY 361
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1275874120 400 SLINLFSFNTLYNfSVGRDMYLGMSALLLFTVFGGSLLSWLIF 442
Cdd:PRK12664 362 AFISKSKSKPEAE-KVYIGSKLSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
198-397 |
1.57e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 47.78 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 198 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNFI---LLLIGCLTMFMSGVAANYEFDLKKIIAL 274
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVapgLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 275 STLSQLGLMMGVLGVGYPLL---SFFHLLTHALFKSLLFLCAGCYIH--GMLDNQDIRSMGSLTLNMPYTSACLNVANLS 349
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIVERkvGTRDLDVLNGLMNPIRGLPLTSALLVLAGMA 381
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1275874120 350 LCGFPFLSGFYSKDLILEvCSFSCMNyFIYFLFFFSTGLTASYSFRLL 397
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQ-GSFSTFP-IPTLLCIVASGLTAVYFVILL 427
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
41-88 |
1.50e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 39.72 E-value: 1.50e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1275874120 41 AINSSVIVMGVLFDWMSLIFMGFVFIISSMVLFYSSDYMSSDLNSDRF 88
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-367 |
1.90e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.66 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 184 CLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALvhssTLVTagvylLIRFSPM----LFSSKMNF-ILLLIGCLTMFMS 258
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTAL----ILST-----WQKLAPLtlllMTSNSLNPtLLLTLAILSTLIG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 259 GVAANYEFDLKKIIALSTLSQLGLMMGVLGVGyPLLSFFHLLTHALFKSLLFLcagcyIHGMLDNQDIRSMGSLTLNMPY 338
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPT 239
|
170 180
....*....|....*....|....*....
gi 1275874120 339 TSACLNVANLSLCGFPFLSGFYSKDLILE 367
Cdd:MTH00112 240 LNTTLMLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
194-453 |
6.60e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 42.36 E-value: 6.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 194 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSKMNF---ILLLIGCLTMFMSGVAANYEFDLKK 270
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYfapLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 271 IIALSTLSQLGL---------MMGVLGvgypllSFFHLLTHALFKSLLFLcAGCYIHGMLDNQDIRSMGSLTLNMPYTSA 341
Cdd:MTH00204 302 LIAYSSVAHMGLvplglfthtIEGLVA------AVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVI 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 342 CLNVANLSLCGFPfLSGFYSKDLILEVCSFScMNYFIYFLFFFSTGLTASYSFRLLYYSLINLFSFNTLYNFSVGRDMYL 421
Cdd:MTH00204 375 IMLVLSLANMGFP-LSCNFVGEFFSLLAAFE-YSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELL 452
|
250 260 270
....*....|....*....|....*....|..
gi 1275874120 422 GMSALLLFTVFGGSLLSWLIFPTPVCVYLPLG 453
Cdd:MTH00204 453 AILPLIIAIFLLGIVPFIIIDLVKNSLVFSPG 484
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
194-361 |
7.36e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.33 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 194 KSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS-PMLFSSKMNF--ILLLIGCLTMFMSGVAANYEFDLK 269
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvQMLPDAHVYFapALAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 270 KIIALSTLSQLG-LMMGV-----LGVGYPLLsffHLLTHALFKSLLFLCAGCY---IHGMLdnqdIRSMGSLTLNMPYTS 340
Cdd:PRK12561 277 RRLAYSSVSHMGfVLLGIaaftdLGISGAML---QMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTF 349
|
170 180
....*....|....*....|.
gi 1275874120 341 ACLNVANLSLCGFPFLSGFYS 361
Cdd:PRK12561 350 ALFTASSMASLALPGMSGFVS 370
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
198-365 |
1.81e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 41.22 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 198 IPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFSSKMNFI---LLLIGCLTMFMSGVAANYEFDLKKIIA 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 274 LSTLSQLGLMMGVLGVGYPL---LSFFHLLTHALFKSLLFLCAGCYIH--GMLDNQDIRSMGSLTLNMPYTSACLNVANL 348
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVGVVYKktGSRDVDVLRGLLNPERGLPITGSLMILGVM 380
|
170
....*....|....*..
gi 1275874120 349 SLCGFPFLSGFYSKDLI 365
Cdd:PRK06473 381 ASAGIPGMVGFIAEFLV 397
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
162-442 |
1.84e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 40.72 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 162 FGSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSS 241
Cdd:MTH00200 73 GGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 242 kmnfILLLIGCLTMFMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGyPLLSFFHLLTHALFKSLLFLcagcyIHGML 321
Cdd:MTH00200 153 ----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-----LLNLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 322 DNQDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSKDLILevcsfscMNYFIYFLFFFSTGLTASYSFRLLYYS- 400
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSLLSLFFYLr 295
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1275874120 401 -------LINLFSFNTLYNFSVGRDMYLGMSALLLFTVFGGSLLSWLIF 442
Cdd:MTH00200 296 lsyltllTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
147-311 |
2.45e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 40.42 E-value: 2.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 147 IGDVFILLSISWMLNF-GSWNYIYYYDYFFHSYDYSIVCLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVT 225
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 226 AGVYLLIRFSPMLFSSKMNFILLLIGCLTMFM---SGVAANYEFDLKKIIALSTLSQLGL---------MMGVLGvgypl 293
Cdd:MTH00217 251 LGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAiiyGSLTTCRQVDLKRIIAYSSVAHMGLvtlgifshtIQGLVA----- 325
|
170
....*....|....*...
gi 1275874120 294 lSFFHLLTHALFKSLLFL 311
Cdd:MTH00217 326 -AIFLMLAHGLVSSALFI 342
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
184-367 |
3.56e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.90 E-value: 3.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 184 CLMVMFAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFSSkmnfILLLIGCLTMFMSGVAAN 263
Cdd:MTH00070 95 TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 264 YEFDLKKIIALSTLSQLGLMMGVLGVGyPLLSFFHLLTHALFKSLLFLcagcyIHGMLDNQDIRSMGSLTLNMPYTSACL 343
Cdd:MTH00070 171 NQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL-----MLMNLNSTNINKLSSSWSKNPTLTSMM 244
|
170 180
....*....|....*....|....
gi 1275874120 344 NVANLSLCGFPFLSGFYSKDLILE 367
Cdd:MTH00070 245 MLTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
181-362 |
8.43e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 38.88 E-value: 8.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 181 SIVCLMVMFAGMT-KSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFSS---KMNFILLLIGCLTM 255
Cdd:PRK02504 209 LALALVFVIAGIAfKISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLLVTAFPSfdeQWKLLFTALAILSM 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1275874120 256 FMSGVAANYEFDLKKIIALSTLSQLGLMMGVLGVGypllsffhllTHALFKSLLF---------LCA-GCYIHGML--DN 323
Cdd:PRK02504 288 VLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAG----------TEAGYASMVFyllaylfmnLGAfACVILFSLrtGT 357
|
170 180 190
....*....|....*....|....*....|....*....
gi 1275874120 324 QDIRSMGSLTLNMPYTSACLNVANLSLCGFPFLSGFYSK 362
Cdd:PRK02504 358 DQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| |
