beta-xylosidase [Xanthomonas citri pv. phaseoli var. fuscans]
Protein Classification
Ig and FN3 domain-containing protein; fibronectin type III domain-containing protein; purple acid phosphatase N-terminal domain-containing protein; receptor tyrosine-protein kinase( domain architecture ID 10007666)
Ig and FN3 domain-containing protein similar to Homo sapiens contactins, which are comprised of six immunoglobulin (Ig)-like domains followed by four fibronectin type III (Fn3) domains anchored to the membrane by glycosylphosphatidylinositol, and to Robo (roundabout) receptors which typically contain five Ig-like domains and three FN3 domains; fibronectin type III (FN3) domain-containing protein may be involved in specific interactions with other molecules through its FN3 domain; fibronectin type III (FN3) domain-containing protein may be involved in specific interactions with other molecules through its FN3 domain; fibronectin type III (FN3) domain-containing protein similar to human Target of Nesh-SH3 (Tarsh) and Drosophila melanogaster cytokine receptor (protein domeless); fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III (FN3) domain-containing protein such as mammalian interleukin-7 receptor subunit alpha; fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III domain-containing protein such as Drosophila melanogaster Ihog (interference hedgehog) and human neural cell adhesion molecule (NCAM); fibronectin type III (FN3) domain-containing protein may be involved in specific interactions with other molecules through its FN3 domain; fibronectin type III (FN3) domain-containing protein similar to human Target of Nesh-SH3 (Tarsh) and Drosophila melanogaster cytokine receptor (protein domeless); fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III (FN3) domain-containing protein such as mammalian interleukin-7 receptor subunit alpha; fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III domain-containing protein such as Drosophila melanogaster Ihog (interference hedgehog) and human neural cell adhesion molecule (NCAM); fibronectin type III (FN3) domain-containing protein similar to human Target of Nesh-SH3 (Tarsh) and Drosophila melanogaster cytokine receptor (protein domeless); fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III (FN3) domain-containing protein may be involved in specific interactions with other molecules through its FN3 domain; fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III (FN3) domain-containing protein similar to human Target of Nesh-SH3 (Tarsh) and Drosophila melanogaster cytokine receptor (protein domeless); fibronectin type III (FN3) domain-containing protein similar to human Target of Nesh-SH3 (Tarsh) and Drosophila melanogaster cytokine receptor (protein domeless); fibronectin type III (FN3) domain-containing protein similar to human Target of Nesh-SH3 (Tarsh) and Drosophila melanogaster cytokine receptor (protein domeless); fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III (FN3) domain-containing protein similar to human Target of Nesh-SH3 (Tarsh) and Drosophila melanogaster cytokine receptor (protein domeless); fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; fibronectin type III domain-containing protein similar to mammalian interleukin-9 and interleukin-21 receptors, and vertebrate phytanoyl-CoA hydroxylase-interacting protein; purple acid phosphatase N-terminal domain-containing protein; receptor tyrosine-protein kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates, similar to Sus scrofa insulin-like growth factor 1 (IGF1) receptor that binds IGF1 with high affinity and IGF2 and insulin with a lower affinity
List of domain hits
| Name | Accession | Description | Interval | E-value | ||||||||
| XynB | COG3664 | Beta-xylosidase [Carbohydrate transport and metabolism]; |
16-517 | 0e+00 | ||||||||
Beta-xylosidase [Carbohydrate transport and metabolism]; : Pssm-ID: 442881 Cd Length: 490 Bit Score: 591.12 E-value: 0e+00
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| Name | Accession | Description | Interval | E-value | ||||||||
| XynB | COG3664 | Beta-xylosidase [Carbohydrate transport and metabolism]; |
16-517 | 0e+00 | ||||||||
Beta-xylosidase [Carbohydrate transport and metabolism]; Pssm-ID: 442881 Cd Length: 490 Bit Score: 591.12 E-value: 0e+00
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| Glyco_hydro_39 | pfam01229 | Glycosyl hydrolases family 39; |
28-506 | 9.63e-100 | ||||||||
Glycosyl hydrolases family 39; Pssm-ID: 426141 Cd Length: 472 Bit Score: 308.77 E-value: 9.63e-100
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| agarase_cat | cd21510 | alpha-beta barrel catalytic domain of agarase, such as GH86-like endo-acting agarases ... |
174-248 | 2.26e-05 | ||||||||
alpha-beta barrel catalytic domain of agarase, such as GH86-like endo-acting agarases identified in non-marine organisms; Typically, agarases (E.C. 3.2.1.81) are found in ocean-dwelling bacteria since agarose is a principle component of red algae cell wall polysaccharides. Agarose is a linear polymer of alternating D-galactose and 3,6-anhydro-L-galactopyranose. Endo-acting agarases, such as glycoside hydrolase 16 (GH16) and GH86 hydrolyze internal beta-1,4 linkages. GH86-like endo-acting agarase of this protein family has been identified in the human intestinal bacterium Bacteroides uniformis. This acquired metabolic pathway, as demonstrated by the prevalence of agar-specific genetic cluster called polysaccharide utilization loci (PULs), varies considerably between human populations, being much more prevalent in a Japanese sample than in North America, European, or Chinese samples. Agarase activity was also identified in the non-marine bacterium Cellvibrio sp. Pssm-ID: 411072 Cd Length: 321 Bit Score: 46.41 E-value: 2.26e-05
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| Name | Accession | Description | Interval | E-value | ||||||||
| XynB | COG3664 | Beta-xylosidase [Carbohydrate transport and metabolism]; |
16-517 | 0e+00 | ||||||||
Beta-xylosidase [Carbohydrate transport and metabolism]; Pssm-ID: 442881 Cd Length: 490 Bit Score: 591.12 E-value: 0e+00
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| Glyco_hydro_39 | pfam01229 | Glycosyl hydrolases family 39; |
28-506 | 9.63e-100 | ||||||||
Glycosyl hydrolases family 39; Pssm-ID: 426141 Cd Length: 472 Bit Score: 308.77 E-value: 9.63e-100
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| agarase_cat | cd21510 | alpha-beta barrel catalytic domain of agarase, such as GH86-like endo-acting agarases ... |
174-248 | 2.26e-05 | ||||||||
alpha-beta barrel catalytic domain of agarase, such as GH86-like endo-acting agarases identified in non-marine organisms; Typically, agarases (E.C. 3.2.1.81) are found in ocean-dwelling bacteria since agarose is a principle component of red algae cell wall polysaccharides. Agarose is a linear polymer of alternating D-galactose and 3,6-anhydro-L-galactopyranose. Endo-acting agarases, such as glycoside hydrolase 16 (GH16) and GH86 hydrolyze internal beta-1,4 linkages. GH86-like endo-acting agarase of this protein family has been identified in the human intestinal bacterium Bacteroides uniformis. This acquired metabolic pathway, as demonstrated by the prevalence of agar-specific genetic cluster called polysaccharide utilization loci (PULs), varies considerably between human populations, being much more prevalent in a Japanese sample than in North America, European, or Chinese samples. Agarase activity was also identified in the non-marine bacterium Cellvibrio sp. Pssm-ID: 411072 Cd Length: 321 Bit Score: 46.41 E-value: 2.26e-05
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| AbfA | COG3534 | Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]; |
144-258 | 5.17e-03 | ||||||||
Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]; Pssm-ID: 442755 [Multi-domain] Cd Length: 487 Bit Score: 39.34 E-value: 5.17e-03
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| Blast search parameters | ||||
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