|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-336 |
2.37e-127 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 376.02 E-value: 2.37e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00165 232 RFNNLLFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLC 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 81 AGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAAY 160
Cdd:MTH00165 312 AGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSY 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 161 SFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILGSYLGYL 240
Cdd:MTH00165 392 SFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 241 ISSMSISNNLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLGYISCKSFDYGWGEMMGGQGLYG*FIYMINYMQGWYD 320
Cdd:MTH00165 472 LSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQN 551
|
330
....*....|....*.
gi 1273810826 321 SNFKIYLVTFIFWMFI 336
Cdd:MTH00165 552 NNLKIYLLSFLLWMII 567
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-336 |
1.34e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 263.24 E-value: 1.34e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLD-NYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00151 228 RFFPFLSsSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00151 308 CAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTAL 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILGSYLGY 239
Cdd:MTH00151 388 YSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 240 LISSMSISNNLISLdllsLVSFVGSLWFMPFLSTKFISYLPLKLGYISCKSFDYGWGEMMGGQGLYG*FIYMINYMQGWY 319
Cdd:MTH00151 468 GFWDSGFSSSKMVK----LSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWP 543
|
330
....*....|....*..
gi 1273810826 320 DSNFKIYLVTFIFWMFI 336
Cdd:MTH00151 544 VKWFNFFIGLILLLVLF 560
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-327 |
1.16e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 258.54 E-value: 1.16e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDN-YGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00207 231 RFYPFLSStYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFV 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00207 311 CAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAA 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILGSYLGY 239
Cdd:MTH00207 391 YSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAW 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 240 LISSMSISNNLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLGYISCKSFDYGWGEMMGGQGLYG*FIYMINYMQGWY 319
Cdd:MTH00207 471 LFTTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQ 550
|
....*...
gi 1273810826 320 DSNFKIYL 327
Cdd:MTH00207 551 KNIPNNYL 558
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-336 |
6.44e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 253.80 E-value: 6.44e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYG-FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00209 227 RFFPSLFSSPfFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFI 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00209 307 CAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILGSYLGY 239
Cdd:MTH00209 387 YSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMY 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 240 lissMSISNNLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLGYISCKSFDYGWGEMMGGQGLYG*FIYMINYMQGWY 319
Cdd:MTH00209 467 ----MVLKKNFFLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQ 542
|
330
....*....|....*..
gi 1273810826 320 DSNFKIYLVTFIFWMFI 336
Cdd:MTH00209 543 NNSLKLFVTFMMLILLG 559
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-336 |
6.61e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 217.90 E-value: 6.61e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPM-LDNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00211 256 RLSPLfQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFM 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00211 336 CSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAA 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPI-PISVSLPYYLKFLTIIVVILGSYLG 238
Cdd:MTH00211 416 YSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLG 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 239 ylissMSISNNLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLG-YISCKSFDYGWGEMMGGQGLYG*FIYMINYMQG 317
Cdd:MTH00211 496 -----LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTS 570
|
330
....*....|....*....
gi 1273810826 318 WYDSNFKIYLVTFIFWMFI 336
Cdd:MTH00211 571 PQQGLIKSYLALLLLSLLL 589
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-336 |
2.17e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 195.96 E-value: 2.17e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYG-FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00208 288 RTSPLISNSPwFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFL 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00208 368 CSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAV 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPiSVSLPYYLKFLTIIVVILGSYLGY 239
Cdd:MTH00208 448 YSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSF 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 240 LISSMSISNNLISldllSLVSFVGSLWFMPFLSTKFISYLPLKLG-YISCKSFDYGWGEMMGGQGLYG*FIYMINYMQGW 318
Cdd:MTH00208 527 SFLLSLSSNPINS----NFFSFLSNQWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLT 602
|
330
....*....|....*...
gi 1273810826 319 YDSNFKIYLVTFIFWMFI 336
Cdd:MTH00208 603 QTGYIKQYLLSSTLLFLL 620
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
16-336 |
1.39e-56 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 193.07 E-value: 1.39e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 16 LIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIR 95
Cdd:MTH00004 277 LCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIR 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 96 FMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAAYSFRLFYYSMSGDNNY 175
Cdd:MTH00004 357 KMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRT 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 176 YSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPIS-VSLPYYLKFLTIIVVILGSYLGYLISSMsiSNNLISLD 254
Cdd:MTH00004 437 PPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPpMTMPTTTKLAALIVTILGILLALELSNM--TTTLTPPK 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 255 LLSLVSFVGSLWFMPFLSTKFISYLPLKLGY-ISCKSFDYGWGEMMGGQGLYG*FIYMINYMQGWYDSNFKIYLVTFIFW 333
Cdd:MTH00004 515 QNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQkIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALT 594
|
...
gi 1273810826 334 MFI 336
Cdd:MTH00004 595 ILL 597
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-332 |
1.80e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 182.03 E-value: 1.80e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPML-DNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00066 259 RFHPLLeNNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFL 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00066 339 CSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAV 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPI-PISVSLPYYLKFLTIIVVILGSYLG 238
Cdd:MTH00066 419 YSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIA 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 239 YLISSMSISNNLISLdllsLVSFVGSLWFMPFLSTKFISYLPLKLGY-ISCKSFDYGWGEMMGGQGLYG*FIYMINYMQG 317
Cdd:MTH00066 499 LDLAKITSKTTPKTK----MHSFSNLLAFFPTIIHRLSPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITN 574
|
330
....*....|....*
gi 1273810826 318 WYDSNFKIYLVTFIF 332
Cdd:MTH00066 575 IQTGLIKTYLTLFLI 589
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-284 |
5.20e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 178.12 E-value: 5.20e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFG-SFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00108 262 RFHPLMENNKTIqTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFM 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00108 342 CSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAA 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPIS-VSLPYYLKFLTIIVVILGSYLG 238
Cdd:MTH00108 422 YSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPqMTMPLYLKLTALAVTILGFILA 501
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1273810826 239 YLISSMsiSNNLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLG 284
Cdd:MTH00108 502 LELNLL--TNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMS 545
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-169 |
2.98e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 165.39 E-value: 2.98e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFL-LIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00137 267 RLSPLMENNQTALTTcLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00137 347 CSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAV 426
|
170
....*....|.
gi 1273810826 160 YSFRL-FYYSM 169
Cdd:MTH00137 427 YSLRVvFFVSM 437
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-241 |
6.37e-45 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 161.86 E-value: 6.37e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPML-DNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:COG1009 263 RLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFL 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLkDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE-LVCLSWVNCLIFFLYFISTGLTA 158
Cdd:COG1009 343 GAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTA 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 159 AYSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWI---------IFPIPISVSLPYYLKFLTII 229
Cdd:COG1009 422 FYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLL 501
|
250
....*....|..
gi 1273810826 230 VVILGSYLGYLI 241
Cdd:COG1009 502 LSLLGIALGYLL 513
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
17-309 |
1.77e-38 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 144.00 E-value: 1.77e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 17 IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQDIRF 96
Cdd:MTH00210 280 ILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 97 MGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAAYSFRLFYYSMSGDNNYY 176
Cdd:MTH00210 360 MGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSK 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 177 SSYSFDD--SSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILGSYLGYLISSMSI------SN 248
Cdd:MTH00210 440 KEVFIGVheSSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVflikisRR 519
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1273810826 249 NLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLGY-ISCKSFDYGWGEMMGGQGLYG*FI 309
Cdd:MTH00210 520 GVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHlITYRIIDRGLLEIIGPRGISKVLI 581
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-313 |
3.09e-38 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 143.29 E-value: 3.09e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFLL-IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:MTH00020 262 RSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFL 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 80 CAGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAA 159
Cdd:MTH00020 342 SAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAF 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDD--SSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVS--LPYYLKFLTIIVVILGS 235
Cdd:MTH00020 422 YSIRLIYLTFLSNTNLKKAVFFHLheGDWNLLLPLGILALGSIFVGYLAKEMIWSFQITLPpiVPLSIKLLPVFLSLGGI 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 236 YLGYLISSMSIS--NNLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLGY-ISCKSFDYGWGEMMGGQGLYG*FIYMI 312
Cdd:MTH00020 502 GLVIILYFYSSKtfRVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHlISYRTIDKGVLELVGPKGISNFLIILT 581
|
.
gi 1273810826 313 N 313
Cdd:MTH00020 582 Q 582
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
12-241 |
2.56e-37 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 140.88 E-value: 2.56e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 12 GSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHNLKDS 91
Cdd:TIGR01974 277 LYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 92 QDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAAYSFRLFYYSMSG 171
Cdd:TIGR01974 357 QDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 172 DNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPI-----------PISVSLPYYLKFLTIIVVILGSYLGYL 240
Cdd:TIGR01974 437 KERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLkgvlptsaepaLEHHHVPALEIWSPTAVAILGILLAYL 516
|
.
gi 1273810826 241 I 241
Cdd:TIGR01974 517 L 517
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
160-336 |
3.78e-37 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 131.52 E-value: 3.78e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 160 YSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILGSYLGY 239
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 240 LISSMSISNNLISLdLLSLVSFVGSLWFMPFLSTKFISYLPLKLGYISCKSFDYGWGEMMGGQGLYG*FIYMINYMQGWY 319
Cdd:pfam06455 81 ELSNLSNKQLKKSL-NFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170
....*....|....*..
gi 1273810826 320 DSNFKIYLVTFIFWMFI 336
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLL 176
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
14-165 |
1.25e-36 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 139.14 E-value: 1.25e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 14 FLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHNLKDSQD 93
Cdd:PRK06590 283 FVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQD 362
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1273810826 94 IRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILElVCLSWVNCLIFFLYFISTGLTAAYSFRLF 165
Cdd:PRK06590 363 IRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
12-172 |
2.22e-33 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 130.14 E-value: 2.22e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 12 GSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHNLKD- 90
Cdd:PRK07376 291 MTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEv 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 91 -------SQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSwvNCLIFFLYFISTGLTAAYSFR 163
Cdd:PRK07376 371 vghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFR 448
|
....*....
gi 1273810826 164 LFYYSMSGD 172
Cdd:PRK07376 449 MYFLTFEGE 457
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
14-153 |
7.69e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 107.01 E-value: 7.69e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 14 FLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKALLFMCAGSMIHNLKD 90
Cdd:pfam00361 149 ILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVH 228
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1273810826 91 SQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFIS 153
Cdd:pfam00361 229 TRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
13-165 |
4.78e-25 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 105.74 E-value: 4.78e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 13 SFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHNL---- 88
Cdd:CHL00025 292 NLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepiv 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 89 ----KDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILElvcLSWVNCLIF-FLYFISTGLTAAYSFR 163
Cdd:CHL00025 372 gyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFaIIAWSTAGLTAFYMFR 448
|
..
gi 1273810826 164 LF 165
Cdd:CHL00025 449 IY 450
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
17-304 |
2.04e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 103.88 E-value: 2.04e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 17 IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM-GYPKLAFFHLLTHALFKALLFMCAGSMIHNLK-DSQDI 94
Cdd:MTH00032 294 IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDM 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 95 RFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCL----------------------------------- 139
Cdd:MTH00032 374 RKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegy 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 140 -SWVNCLIFFLYFISTGLTAAYSFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPIS-- 216
Cdd:MTH00032 454 pSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDILIGdi 533
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 217 --VSLPYYLKFLTIIVVILGSYLGYLISSMSISNNLI-------SLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLGYIS 287
Cdd:MTH00032 534 ehPIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYwgfdpigPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWG 613
|
330
....*....|....*...
gi 1273810826 288 C-KSFDYGWGEMMGGQGL 304
Cdd:MTH00032 614 IyKTLDRGWLELFGPQGI 631
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-167 |
3.97e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 99.07 E-value: 3.97e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKL---AFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:COG0651 271 LGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 88 LKdSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVcLSWVNCLIFFLYFISTGLTAAYSFRLFYY 167
Cdd:COG0651 351 TG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-285 |
2.31e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 91.52 E-value: 2.31e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00095 216 NFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQ 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 81 AGSMIHNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGLTAAY 160
Cdd:MTH00095 296 VGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGY 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 161 SFRLFYYSMSGDNNYYSSYSFDDSSYFISFGMVglliiaVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILgsyLGYL 240
Cdd:MTH00095 376 SYRLWKSFFLSFSKVVNVYSSSVLMNFLSLMLV------FFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLF---MIML 446
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1273810826 241 ISSMSISNNLISLDLLSLVSFVGSLWFMPFLSTKFISYLPLKLGY 285
Cdd:MTH00095 447 FSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGY 491
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-164 |
3.72e-20 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 91.64 E-value: 3.72e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFLLII-GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKAL 76
Cdd:PRK12650 260 RFSPVFHDVAVWNWLLIIvGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSS 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 77 LFMCAGSMIHNlKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTGL 156
Cdd:PRK12650 340 LFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAAL 418
|
170
....*....|..
gi 1273810826 157 TA----AYSFRL 164
Cdd:PRK12650 419 GAvftfAYSARL 430
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-167 |
2.81e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 88.40 E-value: 2.81e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 10 GFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG---LMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIH 86
Cdd:PRK08375 269 GLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGyilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEV 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 87 NLKdSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK-DLILELVCLSWVNCLIFFLyfISTGLTAAYSFRLF 165
Cdd:PRK08375 349 TYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIW 425
|
..
gi 1273810826 166 YY 167
Cdd:PRK08375 426 YR 427
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
15-166 |
4.87e-17 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 82.28 E-value: 4.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 15 LLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHL---LTHALFKALLFMCAGSMIHNlKDS 91
Cdd:PRK12644 270 VLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGT 348
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1273810826 92 QDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELV----CLSWVNCLIFFLYFISTGLTAAYSFRLFY 166
Cdd:PRK12644 349 RDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
18-163 |
2.77e-16 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 79.85 E-value: 2.77e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 18 IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPK---LAFFHLLTHALFKALLFMCAGSMIHNlKDSQDI 94
Cdd:PRK12648 277 AGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDM 355
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1273810826 95 RFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDL----ILELVCLSWVNCLIFFLYFISTGLTAAYSFR 163
Cdd:PRK12648 356 RRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
15-135 |
2.91e-16 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 79.58 E-value: 2.91e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 15 LLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKALLFMCAGSMIHNlKDS 91
Cdd:PRK12647 262 LPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGT 340
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1273810826 92 QDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12647 341 RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
13-166 |
6.17e-16 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 78.41 E-value: 6.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 13 SFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHNlKDSQ 92
Cdd:PRK07390 285 TVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQ 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1273810826 93 DIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSkdlILELVCLSWVNCLIFFLYFISTGLTAAYS----FRLFY 166
Cdd:PRK07390 364 DLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVNALTAFNltrvFRLVF 438
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-166 |
2.16e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 76.93 E-value: 2.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK12667 294 LSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHA 373
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1273810826 88 LKdSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLyFISTGLTAAYSFRLFY 166
Cdd:PRK12667 374 AG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
17-171 |
1.17e-14 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 74.96 E-value: 1.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 17 IIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKL----------------AFFHLLTHALFKALLFMC 80
Cdd:PRK12645 279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMI 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 81 AGSMIHNlKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE---------LVCLSWVNCLIFFLYF 151
Cdd:PRK12645 359 VGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAW 437
|
170 180
....*....|....*....|
gi 1273810826 152 ISTGLTAAYSFRLFYYSMSG 171
Cdd:PRK12645 438 VASVFTFVYSIIFIFKTFFG 457
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-135 |
1.65e-14 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 74.41 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPML---DNYGFgsFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMG--------------YPKLA 63
Cdd:PRK12646 262 RFTPLLglsNMYIY--IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiYVFVL 339
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1273810826 64 F---FHLLTHALFKALLFMCAGSMIHNlKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12646 340 FaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
5-164 |
5.68e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 72.49 E-value: 5.68e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 5 MLDNYGFGSFL---LIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKALLF 78
Cdd:PRK08377 263 MQNANGWSSVLklvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLF 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 79 MCAGSMIHNLKDSQDIRFMGSVVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeLVCLSWVNCLIFFLYFISTGLTA 158
Cdd:PRK08377 343 LAVGYVGITLGGTEIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEA 420
|
....*.
gi 1273810826 159 AYSFRL 164
Cdd:PRK08377 421 VYYFRL 426
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-166 |
5.99e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 72.44 E-value: 5.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 2 FSPMLDNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMM-----SILSMGYPKL----------AFFH 66
Cdd:PRK08376 277 YGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLlglgvGLAALGDPAMasygeialagGIYH 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 67 LLTHALFKALLFMCAGSMIHNLkDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLswVNCLI 146
Cdd:PRK08376 357 IVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPIL 433
|
170 180
....*....|....*....|
gi 1273810826 147 FFLYFISTGLTAAYSFRLFY 166
Cdd:PRK08376 434 GVIAMIGSVLTLASFVKVFH 453
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
14-135 |
1.71e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 71.40 E-value: 1.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 14 FLLI--IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSIL---SMGYPKLAF----FHLLTHALFKALLFMCAGSM 84
Cdd:PRK12649 278 FILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYgytTYHEPGLGVaaatFHLLNHATFKACLFLVAGIV 357
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1273810826 85 IHNLKdSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12649 358 AHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
12-140 |
5.14e-13 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 69.92 E-value: 5.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 12 GSFLLIIGCMTMFMAGLGANFEFDLKKIIALST-------LSQLGLMMSILSMGYPKLA-------FFHLLTHALFKALL 77
Cdd:PRK06521 276 GVLVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSLL 355
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1273810826 78 FMCAGSMIHNLKdSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLS 140
Cdd:PRK06521 356 FLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-135 |
7.20e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 66.13 E-value: 7.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 6 LDNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSIlsmgyPKLAFFHLLTHALFKALLFMCAGSmI 85
Cdd:PRK07234 239 LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-----PLVGGLYALAHGLVKSTLFLCAGA-L 312
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1273810826 86 HNLKDSQDIRFMGSVVNFMPLTsvcfnVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK07234 313 PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-166 |
7.92e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 65.99 E-value: 7.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 9 YGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPK---LAFFHLLTHALFKALLFMCAGSmI 85
Cdd:PRK06589 277 FAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-I 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 86 HNLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVCLS---WVNCLIFFLYFISTGLTAAYSF 162
Cdd:PRK06589 356 YSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLL 435
|
....
gi 1273810826 163 RLFY 166
Cdd:PRK06589 436 KILS 439
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
11-166 |
1.08e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.79 E-value: 1.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK08668 271 FNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR 350
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1273810826 88 LKDSQdIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILELVcLSWVNCLIFFLYFISTGLTAAYSFRLFY 166
Cdd:PRK08668 351 TGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
11-135 |
1.50e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 65.14 E-value: 1.50e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM-------GYPKLAF-------FHLLTHALFKAL 76
Cdd:PRK08667 269 WGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSL 348
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1273810826 77 LFMCAGSMIHNLKDsQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK08667 349 LFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
10-134 |
3.45e-11 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 64.15 E-value: 3.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 10 GFGSFLLIIGcMTMFMAGLGANF---EFDLKKIIALSTLSQLGLMMSILSMGYPKL---AFFHLLTHALFKALLFMCAGS 83
Cdd:PRK12668 236 AFPGTELLIY-IGAAMAVYGVFFallENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGA 314
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1273810826 84 MIHNLKDSqDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK12668 315 VLYRTGTE-KLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
1-253 |
3.81e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 60.66 E-value: 3.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFMC 80
Cdd:MTH00063 209 RYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFML 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 81 AGSMIHNLKDSQDIR-----FMGSVVNFMPLTSVCfnvssLSLCGMPFLAGFYSKDLILELVCLSWVNCLIFFLYFISTG 155
Cdd:MTH00063 289 VGDVMSGSGGSQSSNcvyssILYGSWNLFYLFLLV-----LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVF 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 156 LTAAYSFRLFyysmsgdnnYYSSYSFDDSSYFISFGMVGLLIIAVFGGSLLSWIIFPIPISVSLPYYLKFLTIIVVILGS 235
Cdd:MTH00063 364 LSYLYSFRLC---------LILFGVKSSLSSGVRFLFFNSGLMVFLWLFINYYVFLLLDEVVYLGVFISLVLLLVQLLGL 434
|
250
....*....|....*....
gi 1273810826 236 YLGYLI-SSMSISNNLISL 253
Cdd:MTH00063 435 LVGVLFyDSNLFSNWSSSL 453
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
11-165 |
4.10e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 60.48 E-value: 4.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGYPKL--AFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:COG1008 274 FAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDR 353
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1273810826 88 LKdSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIleLVCLSWVNCLIFFLYFISTGLTAAYSFRLF 165
Cdd:COG1008 354 TH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLV--LLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
12-127 |
5.92e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 60.23 E-value: 5.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 12 GSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLA--------------FFHLLTHALFKALL 77
Cdd:PRK08042 245 GVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVL 324
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1273810826 78 FMCAGSMIHNlKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGF 127
Cdd:PRK08042 325 FLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-135 |
6.24e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 59.96 E-value: 6.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 14 FLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKL---AFFHLLTHALFKALLFMCAGSMIHnLKD 90
Cdd:PRK07691 277 LILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITG 355
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1273810826 91 SQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK07691 356 TTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
11-134 |
6.32e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 59.99 E-value: 6.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGY--PKLAF----FHLLTHALFKALLFMCAGSM 84
Cdd:PRK06525 271 IGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGAL 350
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1273810826 85 IHNLkDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK06525 351 SYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
11-172 |
4.09e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.44 E-value: 4.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSMGYPKL--AFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK05846 276 FAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDR 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 88 LKdSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIleLVCLSWVNCLIFFLYFISTGLTAAYSFRLFYY 167
Cdd:PRK05846 356 LH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI--LLGSFQVNPVIAFIATTGLILAAVYSLWLYQR 432
|
....*
gi 1273810826 168 SMSGD 172
Cdd:PRK05846 433 VMFGP 437
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
11-166 |
5.26e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 50.91 E-value: 5.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAF---FHLLTHALFKALLFMCAGsMIHN 87
Cdd:PRK08676 272 FSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHR 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 88 LKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-ELVCLS-WVNCLIFFLYFIstgltAAYSFRLF 165
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLL-----AASSFAIF 425
|
.
gi 1273810826 166 Y 166
Cdd:PRK08676 426 L 426
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
12-134 |
1.78e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 49.54 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 12 GSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPkLAFF----HLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK06458 281 GRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVLQK 359
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1273810826 88 lKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK06458 360 -YGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
15-134 |
2.33e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.18 E-value: 2.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 15 LLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKL---AFFHLLTHALFKALLFMCAGSMIHnLKDS 91
Cdd:PRK12663 275 LATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGY 353
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1273810826 92 QDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 134
Cdd:PRK12663 354 RSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-83 |
3.74e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 48.54 E-value: 3.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFLLII-GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:PRK08168 251 RFAPLLEQAPPARWLLVLvGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFL 330
|
....
gi 1273810826 80 CAGS 83
Cdd:PRK08168 331 SASE 334
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-135 |
4.61e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 4.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 10 GFGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYPK---LAFFHLLTHALFKALLFMCAGsMIH 86
Cdd:PRK12665 271 GLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIE 349
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1273810826 87 NLKDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK12665 350 RQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
1-83 |
5.53e-06 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 47.72 E-value: 5.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 1 RFSPMLDNYGFGSFLLIIGCMTMFMaGLGANF-EFDLKKIIALSTLSQLGLMMSILSMGYPKLAFFHLLTHALFKALLFM 79
Cdd:PRK08601 255 RFSPLFHDDIAQILLLIFASISVLI-GTGISLvQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFL 333
|
....
gi 1273810826 80 CAGS 83
Cdd:PRK08601 334 QSGS 337
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-130 |
1.32e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 46.65 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 11 FGSFLLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG---LMMSILSMGYPKLAFFHLLTHALFKALLFMCAGSMIHN 87
Cdd:PRK12662 278 FNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYH 357
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1273810826 88 LkDSQDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 130
Cdd:PRK12662 358 F-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
15-137 |
8.49e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.66 E-value: 8.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 15 LLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGyPKLAFFHLLTHALFKALLFMcagsMIHNLKdSQDI 94
Cdd:MTH00112 154 LLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTL 227
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1273810826 95 RFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-ELV 137
Cdd:MTH00112 228 KDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILqELT 271
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
15-135 |
1.77e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.10 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 15 LLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKALLFMCAGSmIHNLKDS 91
Cdd:PRK06277 269 LIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPlgiVAGIFHAINHVIYKSALFLGAGI-VSYRTKT 347
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1273810826 92 QDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 135
Cdd:PRK06277 348 SNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
15-130 |
2.10e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 42.80 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1273810826 15 LLIIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGYP---KLAFFHLLTHALFKALLFMCAGSMIHNLKDS 91
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEA 351
|
90 100 110
....*....|....*....|....*....|....*....
gi 1273810826 92 QDIRFMGSVVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 130
Cdd:COG1007 352 EEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| |
