|
Name |
Accession |
Description |
Interval |
E-value |
| LT_MltC_MltE |
cd16893 |
membrane-bound lytic murein transglycosylases MltC and MltE, and similar proteins; MltC and ... |
202-363 |
6.53e-97 |
|
membrane-bound lytic murein transglycosylases MltC and MltE, and similar proteins; MltC and MltE are periplasmic, outer membrane attached lytic transglycosylases (LTs), which cleave beta-1,4-glycosidic bonds joining N-acetylmuramic acid and N-acetylglucosamine in the cell wall peptidoglycan, yielding 1,6-anhydromuropeptides. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda
Pssm-ID: 381614 [Multi-domain] Cd Length: 162 Bit Score: 285.22 E-value: 6.53e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 202 PLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRDATKKVYGKERLLSGAELFKPQTNIELGCA 281
Cdd:cd16893 1 PIVEKYAKKYGVDPALILAIIETESSFNPYAVSHSPAYGLMQIVPSTAGRDVYRLLGGKGGLPSKSYLFDPENNIDIGTA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 282 YLHILDRQYLNAVTDPQSRLYCVIAAYNTGAGNVARAFSGNtsVKDAARRINAMSPKQVYAHLRTQLKYEETRNYVQKVT 361
Cdd:cd16893 81 YLHILQNRYLKGIKNPKSREYCAIAAYNGGAGNVLRTFSSD--RKKAISKINRLSPDEVYQHLTKKLPAAETRNYLKKVL 158
|
..
gi 1270473818 362 AA 363
Cdd:cd16893 159 KA 160
|
|
| mltC |
PRK11671 |
membrane-bound lytic murein transglycosylase MltC; |
173-367 |
4.51e-62 |
|
membrane-bound lytic murein transglycosylase MltC;
Pssm-ID: 183271 [Multi-domain] Cd Length: 359 Bit Score: 202.97 E-value: 4.51e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 173 QQNTSKGKVIT-VTIPLQANALPARAHSYLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGR 251
Cdd:PRK11671 164 QSRSNGLRIIYsVTINMVPNHLDKRAHKYLPMVRKASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQHTAGK 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 252 DATkKVYGKERLLSGAELFKPQTNIELGCAYLHILDRQYLNAVTDPQSRLYCVIAAYNTGAGNVARAFSGNTsvKDAARR 331
Cdd:PRK11671 244 DVF-RMKGKSGQPSRSYLFDPANNIDTGTAYLAILQNVYLGGITNPTSRRYAVITAYNGGAGSVLRVFSNDK--IQAANI 320
|
170 180 190
....*....|....*....|....*....|....*.
gi 1270473818 332 INAMSPKQVYAHLRTQLKYEETRNYVQKVTAALAQY 367
Cdd:PRK11671 321 INTMSPGDVYQTLTTRHPSAESRRYLYKVNTAQKSY 356
|
|
| MltE |
COG0741 |
Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin ... |
109-368 |
1.82e-40 |
|
Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain) [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440504 [Multi-domain] Cd Length: 244 Bit Score: 143.21 E-value: 1.82e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 109 AARLSEARIRAEFEKVVQASIRQSYQQDPLLNKVAGSQPPSSSQGVSGIRQADIDALLRQAKQQQQNTSKgkvitvTIPL 188
Cdd:COG0741 18 AAALALALLAAAAAAAALAAAAAALAAAAAAAAGAAAAAASAAAGGPALAAALAAADALAAFAAIAALAA------ELLA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 189 QANALPARAHSYLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRdatkkvYGKE--RLLSG 266
Cdd:COG0741 92 LAALLLRRPLPYLPLIEEAAKKYGVDPALVLALIRQESAFNPNAVSPAGARGLMQLMPATARR------LGLKlgLGPSP 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 267 AELFKPQTNIELGCAYLHILDRQYLNavtdpqsRLYCVIAAYNTGAGNVARAFSGNTSVKDAarrinamspkqvyahlrt 346
Cdd:COG0741 166 DDLFDPETNIRAGAAYLRELLDRFDG-------DLVLALAAYNAGPGRVRRWLRRNGDRDGE------------------ 220
|
250 260
....*....|....*....|..
gi 1270473818 347 QLKYEETRNYVQKVTAALAQYQ 368
Cdd:COG0741 221 IIPYAETRNYVKKVLANYAIYR 242
|
|
| SLT |
pfam01464 |
Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found ... |
204-329 |
9.53e-30 |
|
Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
Pssm-ID: 396169 [Multi-domain] Cd Length: 114 Bit Score: 110.47 E-value: 9.53e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 204 VQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRDAtKKVYGKERllsgaELFKPQTNIELGCAYL 283
Cdd:pfam01464 1 IIKAAQKYGVDPSLLLAIAQQESGFNPKAVSKSGAVGLMQIMPSTAKRLG-LRVNPGVD-----DLFDPEKNIKAGTKYL 74
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1270473818 284 HILDRQYLNavtdpqsRLYCVIAAYNTGAGNVARAFSGNTSVKDAA 329
Cdd:pfam01464 75 KELYKQYGG-------DLWLALAAYNAGPGRVRKWIKNAGAKDKKL 113
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LT_MltC_MltE |
cd16893 |
membrane-bound lytic murein transglycosylases MltC and MltE, and similar proteins; MltC and ... |
202-363 |
6.53e-97 |
|
membrane-bound lytic murein transglycosylases MltC and MltE, and similar proteins; MltC and MltE are periplasmic, outer membrane attached lytic transglycosylases (LTs), which cleave beta-1,4-glycosidic bonds joining N-acetylmuramic acid and N-acetylglucosamine in the cell wall peptidoglycan, yielding 1,6-anhydromuropeptides. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda
Pssm-ID: 381614 [Multi-domain] Cd Length: 162 Bit Score: 285.22 E-value: 6.53e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 202 PLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRDATKKVYGKERLLSGAELFKPQTNIELGCA 281
Cdd:cd16893 1 PIVEKYAKKYGVDPALILAIIETESSFNPYAVSHSPAYGLMQIVPSTAGRDVYRLLGGKGGLPSKSYLFDPENNIDIGTA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 282 YLHILDRQYLNAVTDPQSRLYCVIAAYNTGAGNVARAFSGNtsVKDAARRINAMSPKQVYAHLRTQLKYEETRNYVQKVT 361
Cdd:cd16893 81 YLHILQNRYLKGIKNPKSREYCAIAAYNGGAGNVLRTFSSD--RKKAISKINRLSPDEVYQHLTKKLPAAETRNYLKKVL 158
|
..
gi 1270473818 362 AA 363
Cdd:cd16893 159 KA 160
|
|
| mltC |
PRK11671 |
membrane-bound lytic murein transglycosylase MltC; |
173-367 |
4.51e-62 |
|
membrane-bound lytic murein transglycosylase MltC;
Pssm-ID: 183271 [Multi-domain] Cd Length: 359 Bit Score: 202.97 E-value: 4.51e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 173 QQNTSKGKVIT-VTIPLQANALPARAHSYLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGR 251
Cdd:PRK11671 164 QSRSNGLRIIYsVTINMVPNHLDKRAHKYLPMVRKASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQHTAGK 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 252 DATkKVYGKERLLSGAELFKPQTNIELGCAYLHILDRQYLNAVTDPQSRLYCVIAAYNTGAGNVARAFSGNTsvKDAARR 331
Cdd:PRK11671 244 DVF-RMKGKSGQPSRSYLFDPANNIDTGTAYLAILQNVYLGGITNPTSRRYAVITAYNGGAGSVLRVFSNDK--IQAANI 320
|
170 180 190
....*....|....*....|....*....|....*.
gi 1270473818 332 INAMSPKQVYAHLRTQLKYEETRNYVQKVTAALAQY 367
Cdd:PRK11671 321 INTMSPGDVYQTLTTRHPSAESRRYLYKVNTAQKSY 356
|
|
| MltE |
COG0741 |
Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin ... |
109-368 |
1.82e-40 |
|
Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain) [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440504 [Multi-domain] Cd Length: 244 Bit Score: 143.21 E-value: 1.82e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 109 AARLSEARIRAEFEKVVQASIRQSYQQDPLLNKVAGSQPPSSSQGVSGIRQADIDALLRQAKQQQQNTSKgkvitvTIPL 188
Cdd:COG0741 18 AAALALALLAAAAAAAALAAAAAALAAAAAAAAGAAAAAASAAAGGPALAAALAAADALAAFAAIAALAA------ELLA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 189 QANALPARAHSYLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRdatkkvYGKE--RLLSG 266
Cdd:COG0741 92 LAALLLRRPLPYLPLIEEAAKKYGVDPALVLALIRQESAFNPNAVSPAGARGLMQLMPATARR------LGLKlgLGPSP 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 267 AELFKPQTNIELGCAYLHILDRQYLNavtdpqsRLYCVIAAYNTGAGNVARAFSGNTSVKDAarrinamspkqvyahlrt 346
Cdd:COG0741 166 DDLFDPETNIRAGAAYLRELLDRFDG-------DLVLALAAYNAGPGRVRRWLRRNGDRDGE------------------ 220
|
250 260
....*....|....*....|..
gi 1270473818 347 QLKYEETRNYVQKVTAALAQYQ 368
Cdd:COG0741 221 IIPYAETRNYVKKVLANYAIYR 242
|
|
| Slt70-like |
cd13401 |
70kDa soluble lytic transglycosylase (Slt70) and similar proteins; Catalytic domain of the ... |
200-368 |
1.50e-32 |
|
70kDa soluble lytic transglycosylase (Slt70) and similar proteins; Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
Pssm-ID: 381604 [Multi-domain] Cd Length: 152 Bit Score: 119.12 E-value: 1.50e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 200 YLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRDATKKvygKERLLSGAELFKPQTNIELG 279
Cdd:cd13401 6 YRDLVERAAKKNGLDPALVYAIIRQESAFDPDAVSPAGALGLMQLMPATAKDVAKKL---GLPYYSPRDLFDPEYNIRLG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 280 CAYLHILDRQYlnavtdPQSRLYcVIAAYNTGAGNVARaFSGNTSVKDAARRINAMSpkqvyahlrtqlkYEETRNYVQK 359
Cdd:cd13401 83 SAYLAELLDRF------DGNPVL-ALAAYNAGPGRVRR-WLKRRGDLDPDLWIETIP-------------FSETRNYVKR 141
|
....*....
gi 1270473818 360 VTAALAQYQ 368
Cdd:cd13401 142 VLENYVVYR 150
|
|
| LT_Slt70-like |
cd16896 |
uncharacterized lytic transglycosylase subfamily with similarity to Slt70; Uncharacterized ... |
200-363 |
1.52e-30 |
|
uncharacterized lytic transglycosylase subfamily with similarity to Slt70; Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
Pssm-ID: 381617 [Multi-domain] Cd Length: 146 Bit Score: 113.76 E-value: 1.52e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 200 YLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPgSAGRDATKKVygKERLLSGAELFKPQTNIELG 279
Cdd:cd16896 4 YREYIEKYAKEYGVDPLLVAAVIKVESNFNPNAVSSKGAIGLMQIMP-ETAEWIAEKL--GLEDFSEDDLYDPETNIRLG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 280 CAYLHILDRQYlnavtdpQSRLYCVIAAYNTGAGNVAR--AFSGNTSVKDAARRINamspkqvyahlrtqlkYEETRNYV 357
Cdd:cd16896 81 TWYLSYLLKEF-------DGNLVLALAAYNAGPGNVDKwlKDGGWSGDGKTLDQIP----------------FPETRHYV 137
|
....*.
gi 1270473818 358 QKVTAA 363
Cdd:cd16896 138 KKVLKN 143
|
|
| SLT |
pfam01464 |
Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found ... |
204-329 |
9.53e-30 |
|
Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
Pssm-ID: 396169 [Multi-domain] Cd Length: 114 Bit Score: 110.47 E-value: 9.53e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 204 VQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRDAtKKVYGKERllsgaELFKPQTNIELGCAYL 283
Cdd:pfam01464 1 IIKAAQKYGVDPSLLLAIAQQESGFNPKAVSKSGAVGLMQIMPSTAKRLG-LRVNPGVD-----DLFDPEKNIKAGTKYL 74
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1270473818 284 HILDRQYLNavtdpqsRLYCVIAAYNTGAGNVARAFSGNTSVKDAA 329
Cdd:pfam01464 75 KELYKQYGG-------DLWLALAAYNAGPGRVRKWIKNAGAKDKKL 113
|
|
| emtA |
PRK15470 |
membrane-bound lytic murein transglycosylase EmtA; |
187-364 |
4.46e-29 |
|
membrane-bound lytic murein transglycosylase EmtA;
Pssm-ID: 185367 [Multi-domain] Cd Length: 203 Bit Score: 111.60 E-value: 4.46e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 187 PLQANALPARAHSYLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRDATKKVyGKERLLSG 266
Cdd:PRK15470 26 PWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRM-GWSGEPTT 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 267 AELFKPQTNIELGCAYLHILDRQYLNAVTDPQSRLYCVIAAYNTGAGNVARAFSGNTsvKDAARRINAMSPKQVYAHLRT 346
Cdd:PRK15470 105 SELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDR--KKAISKINDLDADEFLEHVAR 182
|
170
....*....|....*...
gi 1270473818 347 QLKYEETRNYVQKVTAAL 364
Cdd:PRK15470 183 NHPAPQAPRYIYKLEQAL 200
|
|
| LT-like |
cd00254 |
lytic transglycosylase(LT)-like domain; Members include the soluble and insoluble ... |
215-365 |
2.14e-26 |
|
lytic transglycosylase(LT)-like domain; Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
Pssm-ID: 381594 [Multi-domain] Cd Length: 111 Bit Score: 101.52 E-value: 2.14e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 215 PALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAGRDATKKVygkerllsgAELFKPQTNIELGCAYL-HILDRQYLNa 293
Cdd:cd00254 1 PALVLAVIRVESGFNPRAVSPAGARGLMQLMPGTARDLGRRGV---------DDLFDPEENIRAGARYLrELLDRFGGD- 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1270473818 294 vtdpqsrLYCVIAAYNTGAGNVARAFSGNTsvkdaarrinamspkqvyahlrtqLKYEETRNYVQKVTAALA 365
Cdd:cd00254 71 -------LELALAAYNAGPGAVDRWGGGEV------------------------PPYKETRNYVQRVLAYYQ 111
|
|
| MltF |
COG4623 |
Membrane-bound lytic murein transglycosylase MltF [Cell wall/membrane/envelope biogenesis, ... |
190-369 |
6.86e-20 |
|
Membrane-bound lytic murein transglycosylase MltF [Cell wall/membrane/envelope biogenesis, Signal transduction mechanisms];
Pssm-ID: 443662 [Multi-domain] Cd Length: 421 Bit Score: 90.12 E-value: 6.86e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 190 ANALPARAHSYLPLVQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAgrdatkkvygkeRLLSGAEL 269
Cdd:COG4623 254 LRRIEGRLPPYDPLFEKYAEEYGLDWRLLAALAYQESHWNPRARSPTGARGLMQLMPATA------------KELGVDDR 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 270 FKPQTNIELGCAYLHILDRQYLNAVTDPQsRLYCVIAAYNTGAGNVARAfsgntsVKDAARR--------INAMSPKQVY 341
Cdd:COG4623 322 LDPEQSIRAGAKYLRWLYDRFPEAIDEPD-RWWFALAAYNAGPGHVQDA------RRLAKKQgldpdrwfDVEKSQPKYY 394
|
170 180 190
....*....|....*....|....*....|.
gi 1270473818 342 ahlrtQLKYE---ETRNYVQKVTAALAQYQG 369
Cdd:COG4623 395 -----DTGYArgrETVNYVPNIRAYYDIYKR 420
|
|
| PRK11619 |
PRK11619 |
lytic murein transglycosylase; Provisional |
213-367 |
1.60e-18 |
|
lytic murein transglycosylase; Provisional
Pssm-ID: 183236 [Multi-domain] Cd Length: 644 Bit Score: 87.04 E-value: 1.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 213 ISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAgrDATKKVYGKERLLSGAELFKPQTNIELGCAYLHILDRQYln 292
Cdd:PRK11619 492 IPQSYAMAIARQESAWNPKARSPVGASGLMQIMPGTA--THTVKMFSIPGYSSSSQLLDPETNINIGTSYLEYVYQQF-- 567
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1270473818 293 avtdPQSRLYCViAAYNTGAGNVarafsgNTSVKDAARRINAMspkqvyAHLRTqLKYEETRNYVQKVTAALAQY 367
Cdd:PRK11619 568 ----GNNRILAS-AAYNAGPGRV------RTWLGNSAGRIDAV------AFVES-IPFSETRGYVKNVLAYDAYY 624
|
|
| MLTF-like |
cd13403 |
membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins; This subfamily ... |
204-318 |
3.72e-16 |
|
membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins; This subfamily includes membrane-bound lytic murein transglycosylase F (MltF, murein lyase F) that degrades murein glycan strands. It is responsible for catalyzing the release of 1,6-anhydromuropeptides from peptidoglycan. Lytic transglycosylase catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do goose-type lysozymes. However, in addition, it also makes a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
Pssm-ID: 381606 [Multi-domain] Cd Length: 161 Bit Score: 75.26 E-value: 3.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 204 VQSAATKWQISPALVMAIMQTESAFNPMAQSHVPAFGLMQIVPGSAgrdatkkvygkeRLLSGAELFKPQTNIELGCAYL 283
Cdd:cd13403 1 FKKYAEKYGFDWRLLAAQAYQESRFNPNARSPAGARGLMQLMPSTA------------RELGVNDRLDPEQNIHAGAKYL 68
|
90 100 110
....*....|....*....|....*....|....*
gi 1270473818 284 HILDRQYlNAVTDPQSRLYCVIAAYNTGAGNVARA 318
Cdd:cd13403 69 RYLRDRF-PPDIDEPDRLKFALAAYNAGPGHVRDA 102
|
|
| MltD-like |
cd16894 |
Membrane-bound lytic murein transglycosylase D and similar proteins; Lytic transglycosylases ... |
225-363 |
8.17e-09 |
|
Membrane-bound lytic murein transglycosylase D and similar proteins; Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
Pssm-ID: 381615 [Multi-domain] Cd Length: 129 Bit Score: 53.29 E-value: 8.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 225 ESAFNPMAQSHVPAFGLMQIVPGSAgrdatkKVYGK-------ERLlsgaelfkpqtNIEL----GCAYLHILDRQYLNa 293
Cdd:cd16894 17 ESGFNPDAVSSAGAAGLWQFMPATA------REYGLrvdswvdERR-----------DPEKstraAARYLKDLYKRFGD- 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 294 vtdpqsrLYCVIAAYNTGAGNVARAFSGNTSVKDAARRINAMSpkqvyahlrtqlkyEETRNYVQKVTAA 363
Cdd:cd16894 79 -------WLLALAAYNAGEGRVRRAIKRAGTDKWEDYYRLYLP--------------AETRRYVPKFLAA 127
|
|
| mltD |
PRK10783 |
membrane-bound lytic murein transglycosylase D; Provisional |
225-324 |
2.49e-05 |
|
membrane-bound lytic murein transglycosylase D; Provisional
Pssm-ID: 182727 [Multi-domain] Cd Length: 456 Bit Score: 45.88 E-value: 2.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 225 ESAFNPMAQSHVPAFGLMQIVPgSAGRDatkkvYG--KERLLSGAELFKPQTNielgcAYLHILdrQYLNAVTDPQSRLy 302
Cdd:PRK10783 128 ESAFDPHATSGANAAGIWQIIP-STGRN-----YGlkQTRWYDARRDVVASTT-----AALDMM--QRLNKMFDGDWLL- 193
|
90 100
....*....|....*....|..
gi 1270473818 303 cVIAAYNTGAGNVARAFSGNTS 324
Cdd:PRK10783 194 -TVAAYNSGEGRVMKAIKANKA 214
|
|
| Slt35-like |
cd13399 |
Slt35-like lytic transglycosylase; Lytic transglycosylase similar to Escherichia coli lytic ... |
213-318 |
6.94e-05 |
|
Slt35-like lytic transglycosylase; Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
Pssm-ID: 381602 [Multi-domain] Cd Length: 108 Bit Score: 41.53 E-value: 6.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 213 ISPALVMAIMQTESAFNPMAQ-SHVPAFGLMQIVPGSA---GRDATKKvyGKERLLSGAELFKPQTNielgcaYLHILDR 288
Cdd:cd13399 3 VPPGILAAILGVESGFGPNAGgSPAGAQGIAQFMPSTWkayGVDGNGD--GKADPFNPEDAIASAAN------YLCRHGW 74
|
90 100 110
....*....|....*....|....*....|
gi 1270473818 289 QYLNAVTDPQSRlycVIAAYNTGAGNVARA 318
Cdd:cd13399 75 DLNAFLGEDNFL---ALAAYNAGPGAYANA 101
|
|
| LT_IagB-like |
cd13400 |
Escherichia coli invasion protein IagB and similar proteins; Lytic transglycosylase-like ... |
211-311 |
1.18e-04 |
|
Escherichia coli invasion protein IagB and similar proteins; Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
Pssm-ID: 381603 [Multi-domain] Cd Length: 109 Bit Score: 40.98 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 211 WQISPALVMAIMQTESAFNPMAQSHVP----AFGLMQI----VPgsagrdATKKVYGKERLLsgaeLFKPQTNIELGcAY 282
Cdd:cd13400 1 YGVPPRLLRAIAKVESGFNPNAINRNKngsyDIGLMQInsiwLP------ELARYGITREEL----LNDPCTNIYVG-AW 69
|
90 100
....*....|....*....|....*....
gi 1270473818 283 lhILdRQYLNAvtdpQSRLYCVIAAYNTG 311
Cdd:cd13400 70 --IL-ARNIKR----YGNTWKAVGAYNSG 91
|
|
| PRK10859 |
PRK10859 |
membrane-bound lytic murein transglycosylase MltF; |
200-360 |
4.00e-03 |
|
membrane-bound lytic murein transglycosylase MltF;
Pssm-ID: 236778 [Multi-domain] Cd Length: 482 Bit Score: 39.09 E-value: 4.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 200 YLPLVQSAATK--WQispaLVMAIMQTESAFNPMAQSHVPAFGLMQIVpgsagRDATKKVYGKERLlsgaelfKPQTNIE 277
Cdd:PRK10859 290 YQPLFEKYAGEldWR----LLAAIAYQESHWNPQATSPTGVRGLMMLT-----RNTAQSMGVTDRL-------DPEQSIR 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270473818 278 LGCAYLHILDRQYLNAVTDPQsRLYCVIAAYNTGAGNV------ARAFSGN----TSVKDaarRINAMSPKQVYahlrTQ 347
Cdd:PRK10859 354 GGARYLQDLMERLPESIPEPE-RIWFALAAYNIGYGHMldarrlTKKQGGNpdswADVKK---RLPLLSQKKYY----SK 425
|
170
....*....|....*...
gi 1270473818 348 LKY-----EETRNYVQKV 360
Cdd:PRK10859 426 TRYgyargHEAVHYVENI 443
|
|
| |
