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Conserved domains on  [gi|12667668|gb|AAG61238|]
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dissimilatory sulfite reductase subunit A, partial [uncultured sulfate-reducing bacterium UMTRAdsr624-2]

Protein Classification

nitrite reductase large subunit( domain architecture ID 10506759)

nitrite reductase NAD(P)H large subunit similar to NirB, part of the NirBD complex that catalyzes the reduction of nitrite to ammonia

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NIR_SIR_ferr pfam03460
Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key ...
 19-74 3.49e-07

Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to both biosynthetic assimilation of sulfur and nitrogen and dissimilation of oxidized anions for energy transduction. Two copies of this repeat are found in Nitrite and Sulfite reductases and form a single structural domain.


:

Pssm-ID: 377044 [Multi-domain]  Cd Length: 67  Bit Score: 44.06  E-value: 3.49e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 12667668    19 HTVRVNQPASKFyTTEFLRGLCDIWDKYGSG---LTnmhgSTGDIIFLGTITDNLEPLF 74
Cdd:pfam03460   8 YMVRVRVPGGRL-TAEQLRALADIAEKYGDGeirLT----TRQNLELHGVPEEDLPELL 61
 
Name Accession Description Interval E-value
NIR_SIR_ferr pfam03460
Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key ...
 19-74 3.49e-07

Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to both biosynthetic assimilation of sulfur and nitrogen and dissimilation of oxidized anions for energy transduction. Two copies of this repeat are found in Nitrite and Sulfite reductases and form a single structural domain.


Pssm-ID: 377044 [Multi-domain]  Cd Length: 67  Bit Score: 44.06  E-value: 3.49e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 12667668    19 HTVRVNQPASKFyTTEFLRGLCDIWDKYGSG---LTnmhgSTGDIIFLGTITDNLEPLF 74
Cdd:pfam03460   8 YMVRVRVPGGRL-TAEQLRALADIAEKYGDGeirLT----TRQNLELHGVPEEDLPELL 61
 
Name Accession Description Interval E-value
NIR_SIR_ferr pfam03460
Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key ...
 19-74 3.49e-07

Nitrite/Sulfite reductase ferredoxin-like half domain; Sulfite and Nitrite reductases are key to both biosynthetic assimilation of sulfur and nitrogen and dissimilation of oxidized anions for energy transduction. Two copies of this repeat are found in Nitrite and Sulfite reductases and form a single structural domain.


Pssm-ID: 377044 [Multi-domain]  Cd Length: 67  Bit Score: 44.06  E-value: 3.49e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 12667668    19 HTVRVNQPASKFyTTEFLRGLCDIWDKYGSG---LTnmhgSTGDIIFLGTITDNLEPLF 74
Cdd:pfam03460   8 YMVRVRVPGGRL-TAEQLRALADIAEKYGDGeirLT----TRQNLELHGVPEEDLPELL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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