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Conserved domains on  [gi|126253812|sp|Q6P5X7|]
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RecName: Full=Transmembrane protein 71

Protein Classification

TMEM71 domain-containing protein( domain architecture ID 10633457)

TMEM71 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TMEM71 pfam15121
TMEM71 protein family; The function of this family, TMEM71, is not known, however it is ...
1-150 3.40e-99

TMEM71 protein family; The function of this family, TMEM71, is not known, however it is predicted to be a transmembrane protein. This family of proteins is found in eukaryotes and located in the cell membrane. Proteins in this family vary between 41 and 291 amino acids in length.


:

Pssm-ID: 464514  Cd Length: 150  Bit Score: 287.42  E-value: 3.40e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126253812    1 MYRISQLMSTPVASSSRLEREYAGELSPTCIFPSFTCDSLDGYHSFECGSIDPLTGSHYTCRRSPRLLTNGYYIWTEDSF 80
Cdd:pfam15121   1 MYRISQLMSTPVASKSSSEREYAGELSPTCIFPSFACDFLDGDSSFECCSTDPLTGSYCTCRRSPRLLTNGYYIWTEDSF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126253812   81 LCDKDGNITLNPSQTSVMYKENLVRIFRKKKRICHSFSSLFNLSTSKSWLHGSIFGDINSSPSEDNWLKG 150
Cdd:pfam15121  81 LCDEDGNITLSPSQTSVMYKENLVRIFRKKRRIRRSLSSLFDLSASQSWLHGSIFGDVDSSPSEDSWLEG 150
 
Name Accession Description Interval E-value
TMEM71 pfam15121
TMEM71 protein family; The function of this family, TMEM71, is not known, however it is ...
1-150 3.40e-99

TMEM71 protein family; The function of this family, TMEM71, is not known, however it is predicted to be a transmembrane protein. This family of proteins is found in eukaryotes and located in the cell membrane. Proteins in this family vary between 41 and 291 amino acids in length.


Pssm-ID: 464514  Cd Length: 150  Bit Score: 287.42  E-value: 3.40e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126253812    1 MYRISQLMSTPVASSSRLEREYAGELSPTCIFPSFTCDSLDGYHSFECGSIDPLTGSHYTCRRSPRLLTNGYYIWTEDSF 80
Cdd:pfam15121   1 MYRISQLMSTPVASKSSSEREYAGELSPTCIFPSFACDFLDGDSSFECCSTDPLTGSYCTCRRSPRLLTNGYYIWTEDSF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126253812   81 LCDKDGNITLNPSQTSVMYKENLVRIFRKKKRICHSFSSLFNLSTSKSWLHGSIFGDINSSPSEDNWLKG 150
Cdd:pfam15121  81 LCDEDGNITLSPSQTSVMYKENLVRIFRKKRRIRRSLSSLFDLSASQSWLHGSIFGDVDSSPSEDSWLEG 150
 
Name Accession Description Interval E-value
TMEM71 pfam15121
TMEM71 protein family; The function of this family, TMEM71, is not known, however it is ...
1-150 3.40e-99

TMEM71 protein family; The function of this family, TMEM71, is not known, however it is predicted to be a transmembrane protein. This family of proteins is found in eukaryotes and located in the cell membrane. Proteins in this family vary between 41 and 291 amino acids in length.


Pssm-ID: 464514  Cd Length: 150  Bit Score: 287.42  E-value: 3.40e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126253812    1 MYRISQLMSTPVASSSRLEREYAGELSPTCIFPSFTCDSLDGYHSFECGSIDPLTGSHYTCRRSPRLLTNGYYIWTEDSF 80
Cdd:pfam15121   1 MYRISQLMSTPVASKSSSEREYAGELSPTCIFPSFACDFLDGDSSFECCSTDPLTGSYCTCRRSPRLLTNGYYIWTEDSF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 126253812   81 LCDKDGNITLNPSQTSVMYKENLVRIFRKKKRICHSFSSLFNLSTSKSWLHGSIFGDINSSPSEDNWLKG 150
Cdd:pfam15121  81 LCDEDGNITLSPSQTSVMYKENLVRIFRKKRRIRRSLSSLFDLSASQSWLHGSIFGDVDSSPSEDSWLEG 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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