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Conserved domains on  [gi|1248139956|ref|WP_096641219|]
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MULTISPECIES: DUF4145 domain-containing protein [Acinetobacter]

Protein Classification

DUF4145 domain-containing protein( domain architecture ID 10614588)

DUF4145 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4145 pfam13643
Domain of unknown function (DUF4145); This domain is found in a variety of restriction ...
 132-226 3.51e-14

Domain of unknown function (DUF4145); This domain is found in a variety of restriction endonuclease enzymes. The exact function of this domain is uncertain.


:

Pssm-ID: 433374 [Multi-domain]  Cd Length: 88  Bit Score: 66.19  E-value: 3.51e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248139956 132 EAFSLTLHSPSSAANKVRAAVENLLTEFGIPRITRkpgknirlpLDARIAKAKNHKAILGELENILYALKWLGNAGSHAN 211
Cdd:pfam13643   2 EAEKALDADPRAAATMIRRALEALLKDKGIAKGKS---------LYAKIEDLVAKGVIPPALKELLHAIRVIGNDGAHPG 72

                          90
                  ....*....|....*
gi 1248139956 212 SEISVDDVFDAYEFM 226
Cdd:pfam13643  73 KPLTKDDAEDLLEIL 87
 
Name Accession Description Interval E-value
DUF4145 pfam13643
Domain of unknown function (DUF4145); This domain is found in a variety of restriction ...
 132-226 3.51e-14

Domain of unknown function (DUF4145); This domain is found in a variety of restriction endonuclease enzymes. The exact function of this domain is uncertain.


Pssm-ID: 433374 [Multi-domain]  Cd Length: 88  Bit Score: 66.19  E-value: 3.51e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248139956 132 EAFSLTLHSPSSAANKVRAAVENLLTEFGIPRITRkpgknirlpLDARIAKAKNHKAILGELENILYALKWLGNAGSHAN 211
Cdd:pfam13643   2 EAEKALDADPRAAATMIRRALEALLKDKGIAKGKS---------LYAKIEDLVAKGVIPPALKELLHAIRVIGNDGAHPG 72

                          90
                  ....*....|....*
gi 1248139956 212 SEISVDDVFDAYEFM 226
Cdd:pfam13643  73 KPLTKDDAEDLLEIL 87
 
Name Accession Description Interval E-value
DUF4145 pfam13643
Domain of unknown function (DUF4145); This domain is found in a variety of restriction ...
 132-226 3.51e-14

Domain of unknown function (DUF4145); This domain is found in a variety of restriction endonuclease enzymes. The exact function of this domain is uncertain.


Pssm-ID: 433374 [Multi-domain]  Cd Length: 88  Bit Score: 66.19  E-value: 3.51e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248139956 132 EAFSLTLHSPSSAANKVRAAVENLLTEFGIPRITRkpgknirlpLDARIAKAKNHKAILGELENILYALKWLGNAGSHAN 211
Cdd:pfam13643   2 EAEKALDADPRAAATMIRRALEALLKDKGIAKGKS---------LYAKIEDLVAKGVIPPALKELLHAIRVIGNDGAHPG 72

                          90
                  ....*....|....*
gi 1248139956 212 SEISVDDVFDAYEFM 226
Cdd:pfam13643  73 KPLTKDDAEDLLEIL 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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