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Conserved domains on  [gi|1244551953|gb|ATD52489|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Thylacinus cynocephalus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 9.78e-67

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 196.70  E-value: 9.78e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1244551953  81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 9.78e-67

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 196.70  E-value: 9.78e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1244551953  81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 1.29e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.29e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  18 VLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKTT-LILSYSLII 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1244551953  97 LLTSGLAYEWFQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 4.35e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.94  E-value: 4.35e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   3 LILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLT 82
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1244551953  83 STKTTLILSYSL-IILLTSGLAYEWFQKGLEW 113
Cdd:COG0838    86 ELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 9.78e-67

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 196.70  E-value: 9.78e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1244551953  81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 2.30e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 152.77  E-value: 2.30e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLIL-MLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAM 79
Cdd:MTH00136    1 MNLITtILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1244551953  80 QLTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 6.82e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 143.98  E-value: 6.82e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   3 LILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLT 82
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1244551953  83 STKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 2.07e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 142.71  E-value: 2.07e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1244551953  81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 3.86e-38

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 124.32  E-value: 3.86e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1244551953  81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-113 2.50e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 109.22  E-value: 2.50e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   3 LILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLT 82
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1244551953  83 StkTTLILSYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00203   84 S--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 5.49e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 96.08  E-value: 5.49e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLY-LEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAM 79
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1244551953  80 QLTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWTE 115
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 1.29e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.29e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  18 VLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKTT-LILSYSLII 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1244551953  97 LLTSGLAYEWFQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 2-113 7.01e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 90.61  E-value: 7.01e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   2 NLILMLIINFSLATIVVLIAFWL-PQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1244551953  81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 6.81e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.43  E-value: 6.81e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLP-QLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAM 79
Cdd:MTH00202    2 LLILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1244551953  80 QLTSTKTTLILSYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00202   82 KSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 5-114 3.23e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 81.44  E-value: 3.23e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   5 LMLIINFSLATIVVLIAFWLPQLYLY-LEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLTS 83
Cdd:MTH00012    6 IPMMISLILPPLVLGAAWVLAARSTAdREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTST 85

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1244551953  84 TKTTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:MTH00012   86 SKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 4.35e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.94  E-value: 4.35e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   3 LILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLT 82
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1244551953  83 STKTTLILSYSL-IILLTSGLAYEWFQKGLEW 113
Cdd:COG0838    86 ELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-113 8.86e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 77.83  E-value: 8.86e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00055    6 LGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1244551953  81 LTSTKTTLILsYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00055   86 QIGLFGFWVM-YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 5.37e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 73.17  E-value: 5.37e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQ 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1244551953  81 LTSTKTTLILsYSLIILLTSGLAYEWFQKGLEW 113
Cdd:MTH00018   81 QIAPFGFWTM-VGFLFILTLGLIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-114 2.64e-17

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 71.43  E-value: 2.64e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  32 EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKTTLILSYSLIIL-LTSGLAYEWFQKG 110
Cdd:PRK06602   40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVEAMIFILvLLVGLVYLWRKGA 117


                  ....
gi 1244551953 111 LEWT 114
Cdd:PRK06602  118 LDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-113 2.54e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.19  E-value: 2.54e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  32 EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKT-TLILSYSLIILLTSGLAYEWFQKG 110
Cdd:MTH00030   42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKGG 119


                  ...
gi 1244551953 111 LEW 113
Cdd:MTH00030  120 LEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 2.94e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 50.83  E-value: 2.94e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  33 KSSPYECGFDPLGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWAMQLTSTKTTLILSYSLIILLTS-GLAYEWFQK 109
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALFMLTVFvAYAYVWRRG 114


                  ....*
gi 1244551953 110 GLEWT 114
Cdd:PRK07928  115 GLEWD 119
ndhC CHL00022
NADH dehydrogenase subunit 3
 11-114 7.34e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 46.90  E-value: 7.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  11 FSLATIVVLIAFWLPQLYLYL----EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTK- 85
Cdd:CHL00022   14 LIISSLIPILAFLISGLLAPIskgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGv 91

                          90       100
                  ....*....|....*....|....*....
gi 1244551953  86 TTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:CHL00022   92 SAFIEALIFVLILIVGLVYAWRKGALEWS 120
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-114 3.88e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 44.88  E-value: 3.88e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953   1 MNLILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwamq 80
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1244551953  81 LTSTKTTLILSYSLIILLTSGLAYEWFQKGLEWT 114
Cdd:MTH00092   77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIWV 110
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-113 4.76e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 45.12  E-value: 4.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  32 EKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWAMQLTSTKT-TLILSYSLIILLTSGLAYEWFQKG 110
Cdd:PRK07756   41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLfALIEMLIFVVMLLVGLAYAWKKKV 118


                  ...
gi 1244551953 111 LEW 113
Cdd:PRK07756  119 LQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-113 1.88e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 40.81  E-value: 1.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1244551953  33 KSSPYECGFDPLGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWAMQLTSTKT-TLILSYSLIILLTSGLAYEWFQKGL 111
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLfGLIEMLLFIVLLTIGFIYAWKKGAL 123


                  ..
gi 1244551953 112 EW 113
Cdd:PRK08489  124 EW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-76 2.37e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 34.87  E-value: 2.37e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1244551953  35 SPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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