|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-744 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1237.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 1 MELLYKNIWIVPVCPFVASMSVGLGLFFFPKATKSLRRICAIISIFLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNKD 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 81 ISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 161 LIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLANMCALLLFLGPAAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 321 YSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPEKSQNMSFMGGLRKYMPITGTTFLL 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 401 GTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMYFVTFEGDFRGNL--SYKDTDKSVSYKSIWG 478
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFqnYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 479 NlqtlsERDKVFSNNsytsFSDPTGDFYEIPEnVFSLPERRIKNKSLNIEKSFnvlsdfkgsdnrneisedafvsINREI 558
Cdd:CHL00025 481 K-----EESKKINKL----LLLLTMNNNERVS-FFSKKTYKIDGNVRNMIRSF----------------------ITIFG 528
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 559 RNENILYPNESDNSMLFSLISLAIPTLFIGFIGVPFSHKGINSDLLSDLLAPLTDSFHKD--NSENLVDFFLKSIPSVSI 636
Cdd:CHL00025 529 NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHQNsnNSVDWYEFLTNAIFSVSI 608
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 637 ALVGVSISFFIYGPVSS----RDLRK---EIDPKtKDFLGYFFNSLSNWSYYRGYIDNLYNVIFIEGTRILSKSICFFDQ 709
Cdd:CHL00025 609 AFFGIFIASFLYGPVYSslqnLDLINsfvKGGPK-RIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDR 687
|
730 740 750
....*....|....*....|....*....|....*
gi 124302952 710 WIIDGIVNGIGILSFFGGEGMRYGEGGRIPSYLFG 744
Cdd:CHL00025 688 RVIDGITNGVGITSFFVGEGIKYVGGGRISSYLFL 722
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-741 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 803.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 1 MELLYKNIWIVPVCPFVASMSVGLGLFFFPKATKSLRRICAIISIFLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNKD 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 81 ISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 161 LIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLANMCALLLFLGPAAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 321 YSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPEKSQNMSFMGGLRKYMPITGTTFLL 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 401 GTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMYFVTFEGDFRGNlsykdtdksvsyksiwgnl 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFRGN------------------- 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 481 qtlserdkvfsnnsytsfsdptgdfyeipenvfslpERRIKNKSLNIEKSFNVLSDFKGSDNRNEISEDAfvsinreirn 560
Cdd:PRK07376 462 ------------------------------------DKELQKELLAAADAPGHHEGHHEEHGEHHHHSGS---------- 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 561 enilyPNESDNSMLFSLISLAIPTLFIGFIGVPFSHKginsdlLSDLLAPLTDSFHKDNSENLVDFFLKSIPSVSIALVG 640
Cdd:PRK07376 496 -----PHESPWTMTLPLVVLAVPSVLIGLLGTPWNNR------FEAFLHAPGEALEAAAHFEWGEFLILAGASVGIALIG 564
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 641 VSISFFIYgpvssrdLRKEIDPKTkdfLGYFFNSLSNWSYYRGYIDNLYNVIFIEGTRILSKSICFFDQWIIDGIVNGIG 720
Cdd:PRK07376 565 ITLASLMY-------LLKKIDPAA---IAERFPPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTG 634
|
730 740
....*....|....*....|.
gi 124302952 721 ILSFFGGEGMRYGEGGRIPSY 741
Cdd:PRK07376 635 LVTLGSGEGLKYFENGRAQFY 655
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
8-743 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 606.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 8 IWIVPVCPFVASmsvgLGLFFFPKATKslRRICAIISIFLLGIAMFISFSIFWQQIRGNPnHQLLWSWFFNKDISLQIGF 87
Cdd:COG1009 4 LWLIPLLPLLGA----LLAGLLGRRLG--RRAAGWLAALAPLAAFVLSLLLFPAVLGGEV-VVELYTWIPVGSLGLDFGF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 88 LIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFS 167
Cdd:COG1009 77 RLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 168 RPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNgvnlfLANMCALLLFLGPAAKSAQFPLH 247
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSP-----LLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 248 VWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQP 327
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 328 GYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMEpivgyspekSQNMSFMGGLRKYMPITGTTFLLGTLSLCG 407
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 408 IPPFACFWSKDEILVDSWIASAS---LGWIAWCTAGLTGFYMFRMYFVTFEGDFRGNLSYKdtdksvsyksiwgnlqtls 484
Cdd:COG1009 383 IPPFAGFFSKEAILEAALEAGGLgplLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKH------------------- 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 485 erdkvfsnnsytsfsdptgdfyeipenvfslperriknkslnieksfnvlsdfkgsdnrneisedafvsinreirnenil 564
Cdd:COG1009 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 565 yPNESDNSMLFSLISLAIPTLFIGFIGVPFshkginsdlLSDLLAP---LTDSFHKDNSENLvdfflkSIPSVSIALVGV 641
Cdd:COG1009 444 -PHESPWLMTLPLVVLAVLSLVLGLLLPGL---------LEGLLAPaavLGGELHLAHGLLL------NALPLLLSLLGI 507
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 642 SISFFIYGpvsSRDLRKEIDPktkdflgyfFNSLSNWSYYRGYIDNLYNVIFIEGTRILSKSIcFFDQWIIDGIVNGIGI 721
Cdd:COG1009 508 ALGYLLYL---KRPLPALAER---------LKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLAR 574
|
730 740
....*....|....*....|..
gi 124302952 722 LSFFGGEGMRYGEGGRIPSYLF 743
Cdd:COG1009 575 LTLFSGRLLRRLQTGYLQFYAL 596
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
8-743 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 575.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 8 IWIVPVCPFVASMSVGLGlfffpkATKSLRRICAIISIFLLGIAMFISFSIFWQ--QIRGNPNHQLLWSWFFNKDISLQI 85
Cdd:PRK06590 5 LWLIVLLPLIGALILGLF------GRRIGEKWAHLVGTGLVGLSALLSLVVFFDflLGGGRAFSQTLWTWISVGDFDVDF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 86 GFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFW 165
Cdd:PRK06590 79 GLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 166 FSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLserFNDLIDSNGVNLFLANMCALLLFLGPAAKSAQFP 245
Cdd:PRK06590 159 YKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEV---FAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 246 LHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMS 325
Cdd:PRK06590 236 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 326 QPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSL 405
Cdd:PRK06590 316 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLAL 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 406 CGIPPFACFWSKDEILVDSWIA-SASLGWIAWCTAGLTGFYMFRMYFVTFEGDfrgnlsykdtdksvsyksiwgnlqtls 484
Cdd:PRK06590 388 IGIPPFAGFFSKDEILEAAFANgHINLFVAGLVGAFLTAFYSFRLIFLVFHGK--------------------------- 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 485 erdkvfsnnsytsfsdptgdfyeipenvfslPERRIKNkslnieksfnvlsdfkgsdnrneisedafvsinreirnenil 564
Cdd:PRK06590 441 -------------------------------EKEKIHH------------------------------------------ 447
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 565 yPNESDNSMLFSLISLAIPTLFIGFIGVPFshkginsdlLSDLLAPLTDSFHKDNSENLVdfFLKSIPSVSIALVGVSIS 644
Cdd:PRK06590 448 -PHESPAVMTLPLIVLAVLSVFAGALIVPP---------FLGVLPLTTELAHGEAEHHLP--VWVALLPLVVALAGIALA 515
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 645 FFIYGpvssrdlrkeIDPKTKDFLGYFFNSLSNWSYYRGYIDNLYNVIFIEGTRILSKSIC-FFDQWIIDGIVNGIGILS 723
Cdd:PRK06590 516 WLLYL----------KKPTLPTSIAAPGRFLYTLLRNKYYFDELYEKVFVKPGLALARLLWkDGDDGIIDGLVPNSARLV 585
|
730 740
....*....|....*....|
gi 124302952 724 FFGGEGMRYGEGGRIPSYLF 743
Cdd:PRK06590 586 GGGSRVLRRLQTGYLRHYAA 605
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
8-743 |
5.85e-165 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 489.87 E-value: 5.85e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 8 IWIVPVCPFVASMSVGLGlfffpkATKSLRRICAIISIFLLGIAMFISFSIFWQQIRGNPN---HQLLWSWFFNKDISLQ 84
Cdd:TIGR01974 3 IFLIVFLPLIGFLIAGLF------GRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGeafTQSLFPWISVGGFQVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 85 IGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGF 164
Cdd:TIGR01974 77 FGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 165 WFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDihslserFNDLID-SNGVNLFLANMCALLLFLGPAAKSAQ 243
Cdd:TIGR01974 157 WYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLN-------FQEVFAlAPGAFFSALTLICLLLFIGAMGKSAQ 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYST 323
Cdd:TIGR01974 230 LPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYST 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 324 MSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTL 403
Cdd:TIGR01974 310 MSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYITFLIGSL 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 404 SLCGIPPFACFWSKDEILvdsWIASAS-----LGWIAWCTAGLTGFYMFRMYFVTFEGdfrgnlsykdtdksvsyKSIWG 478
Cdd:TIGR01974 382 ALIGFPGFAGFFSKDLIL---EAAFASgthsfLFVAGLIGAFLTAFYSFRLIFMVFHG-----------------KERHE 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 479 NLQtlserdkvfsnnsytsfsdptgdfyeipenvfslperriknkslnieksfnvlsdfkgsdnrneisedafvsinrei 558
Cdd:TIGR01974 442 ADA----------------------------------------------------------------------------- 444
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 559 rnenilYPNESDNSMLFSLISLAIPTLFIGFIGVPFshkginsdllsdlLAPLTDSF---HKDNSENLVDFFLKSIPSVS 635
Cdd:TIGR01974 445 ------HPHESPLVMLLPLIVLAVGSVFAGFFIVPL-------------FEFLKGVLptsAEPALEHHHVPALEIWSPTA 505
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 636 IALVGVSISFFIYgpVSSRDLRKEIDPKTKDFLGYFFNSLsnwsyyrgYIDNLYNVIFIEGTRILSKSICFF-DQWIIDG 714
Cdd:TIGR01974 506 VAILGILLAYLLY--LGNPTLPAKIAQRHSGLYRLLLNKW--------YFDELYDKVFVKPYLFLGKLLWKDpDDKIIDG 575
|
730 740
....*....|....*....|....*....
gi 124302952 715 IVNGIGILSFFGGEGMRYGEGGRIPSYLF 743
Cdd:TIGR01974 576 FGPGIARLVGAISKRLRKSQTGYLRWYAA 604
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
50-461 |
1.18e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 347.00 E-value: 1.18e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 50 IAMFISFSIFWQ-QIRGNPNHQLLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYL 128
Cdd:MTH00210 38 ISAIVSCCIFYEtTLNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 129 SLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSL 208
Cdd:MTH00210 118 SLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 209 SERFNDLIDSNGVNLflanMCaLLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALP 288
Cdd:MTH00210 198 SSLLVTNINKESLTI----IC-LLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 289 FTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMe 368
Cdd:MTH00210 273 LALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV- 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 369 pivgySPEksQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSW----IASASlgWIAWCTAGLTGF 444
Cdd:MTH00210 352 -----SDE--QDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdkyyIAFAY--WLGSFSALLTAF 422
|
410
....*....|....*..
gi 124302952 445 YMFRMYFVTFEGDFRGN 461
Cdd:MTH00210 423 YSIRLIYLTFITNTNSK 439
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
15-454 |
7.41e-109 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 344.75 E-value: 7.41e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 15 PFVASMSVGL-GLFFFPKATKSLRRICAIISIFLlgiamfiSFSIFWQQI-RGNPNHQLLWSWFFNKDISLQIGFLIDPL 92
Cdd:MTH00020 9 PLLGALLSGLfGRKIGEKGAGILTSSCLIISLSW-------SFLIFYEILfNSSTTYIKLWRWLDSDLLTVYFGLQFDGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 93 TSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAA 172
Cdd:MTH00020 82 VAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEAN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 173 NACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLserFNDLIDSNGVNLFLanMCaLLLFLGPAAKSAQFPLHVWLPD 252
Cdd:MTH00020 162 KAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV---FNMVVSAPSSDITL--IC-LFLFIGAVGKSAQLGLHTWLPD 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 253 AMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMML 332
Cdd:MTH00020 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVV 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 333 APGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFA 412
Cdd:MTH00020 316 ACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLT 387
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 124302952 413 CFWSKDEIL---VDSWIASASLgWIAWCTAGLTGFYMFRMYFVTF 454
Cdd:MTH00020 388 GFYSKDLILelaFGQYYLIFAY-WLGCFSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
41-421 |
5.08e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 296.87 E-value: 5.08e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 41 AIISIFLLGIAMFISFSIFWQQIRGNPN-HQLLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQ 119
Cdd:MTH00032 29 GILSTICMGSSTLIALFLAYEVLINDAVvHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 120 GYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWI 199
Cdd:MTH00032 109 HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 200 TGSFDIHSLSERF-NDLIDSNGVNLFLANMCAL--------LLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00032 189 IGSLDFLTFNGGSvGSGIMDRGYYGGGAYESPLapfaiigiLLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 271 AAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGI-GSYRAASFHLITH 349
Cdd:MTH00032 269 TAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNH 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124302952 350 AYSKALLFLGSGSVIHSMEpivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL 421
Cdd:MTH00032 349 AFFKALLFLSAGSVIHSTT-------VDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
71-461 |
1.64e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 280.30 E-value: 1.64e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 71 LLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIF 150
Cdd:MTH00211 59 TNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIG 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 151 WELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLserfndLIDSNGVNLFLanmca 230
Cdd:MTH00211 139 WEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQL------FILNLDLTLFL----- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 231 LLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIAL 310
Cdd:MTH00211 208 LGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCAL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 311 AQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKY 390
Cdd:MTH00211 288 TQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKN 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 124302952 391 MPITGTTFLLGTLSLCGIPPFACFWSKDEILvdSWIASASLGWIAW----CTAGLTGFYMFRMYFVTFEGDFRGN 461
Cdd:MTH00211 360 LPFTSSCLFLGSLALMGFPFLSGFFSKDLIL--ESMNGSYLNAWALlltlLATSLTAAYSFRLIFLSLGGYPRFL 432
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-742 |
3.05e-83 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 277.18 E-value: 3.05e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 1 MELLYKNIWIVPVCPFVAsmsvglGLFFFPKATKSLRRI----CAIISIFLLGIAmFISFSIFWQQIRGNPNHQLLWSWF 76
Cdd:PRK07390 2 LQFLLQTSWLIPLYGLIG------ALLSLPWSPGIIRRTgprpAAYLNLLMTLLA-FVHSLLALRAIWNQPPQQLSFPWL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 77 FNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGM 156
Cdd:PRK07390 75 QVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 157 CSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDihslserFNDLID---SNGVNLFLANMCALLL 233
Cdd:PRK07390 155 STYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLN-------FSDLAAwaaTANLDPLTATLLGLAL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 234 FLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQK 313
Cdd:PRK07390 228 IAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQI 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 314 DLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSmepivgyspEKSQNMSFMGGLRKYMPI 393
Cdd:PRK07390 307 DIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPA 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 394 TGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMYFVTFegdfrgnlsykdtdksvsy 473
Cdd:PRK07390 378 TTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF------------------- 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 474 ksiWGNLQTLSERDkvfsnnsytsfsdptgdfyeiPEnvfslperriknkslnieksfnvlsdfkgsdnrneisedafvs 553
Cdd:PRK07390 439 ---LGKPQQKTRRS---------------------PE------------------------------------------- 451
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 554 inreirnenILYPnesdnsMLFSLISLAIPTLFIGFIGVPFShkginsdLLSDLLAPltdsfhkdnseNLVDFFLKSIPS 633
Cdd:PRK07390 452 ---------VLWP------MALPMVILAGFTLHLPLLLQQWG-------LLPSWEAL-----------NLWAAPLLVASG 498
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 634 vsiaLVGVSISFFIY-GPVSSRDLRKEIDPkTKDFLGYFFnslsnwsyyrgYIDNLYNVIFIEGTRILSKSICFFDQWII 712
Cdd:PRK07390 499 ----LLGVLLGAWIYlNKAWSRPIQLPLRF-LQDLLAYDF-----------YTDRLYRLTIVFVVALISRLTAWFDRYVV 562
|
730 740 750
....*....|....*....|....*....|
gi 124302952 713 DGIVNGIGILSFFGGEGMRYGEGGRIPSYL 742
Cdd:PRK07390 563 DGLVNLVGLATLFSGQGLKYSVSGQSQFYV 592
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
12-453 |
7.37e-81 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 265.09 E-value: 7.37e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 12 PVCPFVASMSVGLGLFFFPKATKSLRRICAIISIFLLGIAMFIsfsiFWQQIRGNPNHQLLWSWFFnkdiSLQIGFLIDP 91
Cdd:COG0651 5 LILPVLLPLLAAALLLLLGRRRRLQRALSLLASLALLALALAL----LLQVLAGGPLVYALGGWPA----PFGIVLVADR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 92 LTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWfSRPSA 171
Cdd:COG0651 77 LSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG-GTKEA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 172 ANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLidsngvNLFLANMCALLLFLGPAAKSAQFPLHVWLP 251
Cdd:COG0651 156 LRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL------DPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 252 DAM-EGPTPISALIHAAtMVAAGIFFVARMFHFF---EALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQP 327
Cdd:COG0651 230 DAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 328 GYMMLAPGIGSYR---AASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLGTLS 404
Cdd:COG0651 309 GYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGALA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 124302952 405 LCGIPPFACFWSKdEILVDSWIASASLGWIAWC--TAGLTGFYMFRMYFVT 453
Cdd:COG0651 380 LAGLPPLSGFVSK-WLLLQAALEAGAWLLAAVLllSSLLTLAYFVRIFGRA 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
30-421 |
3.64e-79 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 269.87 E-value: 3.64e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 30 PKATKSLRRICAIISIfLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNKDISLqiGFLIDPLTSTMLVSVTSVGILVMI 109
Cdd:PRK12647 6 PWLHRLFGRNAGWLLA-LLPLALFLYFLSFIPEIAAGETVRGGYAWVPSLGVNL--SFLLDGLSLTFALLITGIGTLIVL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 110 YSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGL 189
Cdd:PRK12647 83 YAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 190 LLGILGTYWITGSFDIHSLSErFNDLIDSNgvNLFLAnmcALLLFLGPA-AKSAQFPLHVWLPDAMEGPTPISALIHAAT 268
Cdd:PRK12647 163 LAGLILLGNVTGTYSLSELLA-SGDVIREH--PLYLA---ILLLVLGGAfTKSAQFPFHFWLPNAMEAPTPVSAYLHSAT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 269 MVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGS---YRAASFH 345
Cdd:PRK12647 237 MVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLF 316
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 346 LITHAYSKALLFLGSGSVIHSmepiVGyspekSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL 421
Cdd:PRK12647 317 LVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIY 383
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
73-453 |
1.37e-78 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 264.33 E-value: 1.37e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 73 WSWFFNKDISLQIGFLIDPLtSTMLVSVTsvgILV----MIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIY 148
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY-SLMFLPIA---LFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 149 IFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLllgILGTYWITgsfdIHSLSERFNDLIDSNGVNLFLAnm 228
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGL---ILSMAWLA----MTLNTWEIQQLFSPTQTPTLPL-- 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 229 caLLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATI 308
Cdd:MTH00004 213 --LGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATC 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 309 ALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLR 388
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQ 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 124302952 389 KYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL-------VDSWIASASLgwIAwcTAgLTGFYMFRM-YFVT 453
Cdd:MTH00004 363 KTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIetlntsyLNAWALLLTL--LA--TS-FTAAYSLRMiLLVQ 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
6.18e-78 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 252.62 E-value: 6.18e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 141 SPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSerfndLIDSNG 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELS-----KALTGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 221 VNLFLANMCALLLFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFFVARMFHFFE-ALPFTMNIISWVG 298
Cdd:pfam00361 76 LNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 299 GITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIG---SYRAASFHLITHAYSKALLFLGSGSVIHSMepivgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 124302952 376 EKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAG 440
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
43-454 |
3.43e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 261.44 E-value: 3.43e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 43 ISIFLLGIAMFISF--SIFWQQIRGNPNHQLLWSWFFNKDISLQIGFLIDPLTSTMLvsvtSVGILV----MIYSDSYMS 116
Cdd:MTH00208 57 FSISLLKTLAFLSLinLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFF----SVALFVtwsiIEFSHYYMS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 117 HDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGT 196
Cdd:MTH00208 133 NDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 197 YWITGSFDIhslserfNDLIDSNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFF 276
Cdd:MTH00208 213 LINFNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 277 VARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALL 356
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 357 FLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIA-SASLGWI- 434
Cdd:MTH00208 366 FLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASiSNLLSIIl 437
|
410 420
....*....|....*....|
gi 124302952 435 AWCTAGLTGFYMFRMYFVTF 454
Cdd:MTH00208 438 ALIATLLTAVYSFRIIFFCF 457
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
86-434 |
5.21e-70 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 237.95 E-value: 5.21e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 86 GFLIDPLTSTMLVSVTSVGILVMIYSDSYMS-------HDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCS 158
Cdd:PRK06525 70 GLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 159 YLLIGFWFSrPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSerfnDLIDSNGVNLFLAnmcallLFLGPA 238
Cdd:PRK06525 150 WALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALS----GLHGSLKYLVFLG------ILFAAW 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPftmNIISWVGGITALLGATIA----LAQKD 314
Cdd:PRK06525 219 GKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIP---HVIGYVGAVMAIVTLLYGflmyLPQQD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 315 LKKGLAYSTMSQPGYMMLAPGIGSY------RAASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLR 388
Cdd:PRK06525 296 MKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVL 366
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 124302952 389 KYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLGWI 434
Cdd:PRK06525 367 KKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-421 |
1.71e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 240.12 E-value: 1.71e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 114 YMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLllgI 193
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 194 LGTYWI---TGSFDIHSLserfndLIDSNGVNLFLAnmcALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQI------FALSKDFDLTLP---LLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 271 AAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHA 350
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124302952 351 YSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL 421
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAII 401
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
100-459 |
4.71e-69 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 242.83 E-value: 4.71e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 100 VTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAF 179
Cdd:TIGR00940 84 ITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 180 ITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNgvnLFLANMcaLLLFLGPAAKSAQFPLHVWLPDAMEGPTP 259
Cdd:TIGR00940 164 TITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSP---LFGTAM--VLVLLGAFTKSAQFPFHIWLPDAMEAPTP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 260 ISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGS- 338
Cdd:TIGR00940 239 VSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSp 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 339 ---------------YRAASFHLITHAYSKALLFLGSGSVIHSmepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTL 403
Cdd:TIGR00940 319 syhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAMIASA 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 124302952 404 SLCGIPPFACFWSKDEILVDSWIASA-------SLGW----IAWCTAGLTGFYMFRMYFVTFEGDFR 459
Cdd:TIGR00940 390 AMAGVPPFNGFLSKEMFFAEAITAHLvnpfdtvTLGYlfpyVATVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
110-420 |
6.80e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 237.88 E-value: 6.80e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 110 YSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGL 189
Cdd:MTH00066 101 FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGL 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 190 LLGILGTYWITGSFDIHslserfndlidsngvNLFLANMCALLLFLG----PAAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:MTH00066 181 ILSMAWLAMNTNSWELQ---------------QIFLLNDNSTLPLLGlilaAAGKSAQFGLHPWLPAAMEGPTPVSALLH 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 266 AATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFH 345
Cdd:MTH00066 246 SSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFH 325
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 124302952 346 LITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEI 420
Cdd:MTH00066 326 ICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAI 392
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-436 |
1.29e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 243.94 E-value: 1.29e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 10 IVPVCPFVASMSVGLglffFPKATkslRRICAIISIFLLGIAMFISFSIFwQQIRGNPNHQLLWSWFfnKDISLQIGFLI 89
Cdd:PRK12648 5 LLVLLPFLGALLAAL----LPRNA---RNAEAWLAGLVALAALVLLALLY-PAVAAGEVIRAEIEWL--PALGLNLSLRL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 90 DPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRP 169
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 170 SAANACQKAFITNRVGDFGLLLGILGTYWITGSFDI-HSLSERfnDLIDSNGvnLFLAnmcALLLFLGPA-AKSAQFPLH 247
Cdd:PRK12648 155 DARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLdVVLAAG--DLIRAHP--LYPP---ALVLILLGAfTKSAQFPFH 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 248 VWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQP 327
Cdd:PRK12648 228 FWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 328 GYMMLAPGIGS---YRAASFHLITHAYSKALLFLGSGSVIHsmepivgyspEK-SQNMSFMGGLRKYMPITGTTFLLGTL 403
Cdd:PRK12648 308 GLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH----------ETgTRDMRRLSGLRRLMPITATLAMVAAA 377
|
410 420 430
....*....|....*....|....*....|...
gi 124302952 404 SLCGIPPFACFWSKdEILVDSWIASASLGWIAW 436
Cdd:PRK12648 378 AMAGVPLLNGFLSK-EMFFAETLDTHLLGSLDW 409
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
1-461 |
1.21e-67 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 239.06 E-value: 1.21e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 1 MELLYkniwIVPVCPFVASmsvglglFFFPKATKSLRRICAIISIFLLGIAMFISFSIFWQQIR--GNPNHQLLWSwffn 78
Cdd:PRK12645 1 MSLLH----IAILLPFIFA-------LLIPFLYKYFKRIHTGWFVLPVPVVLFIYFLSLIPTTMsgNTVMKTLPWI---- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 79 kdISLQIGF--LIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYV-RFFAYLSLFTASMLGLVLSPNPVQIYIFWELVG 155
Cdd:PRK12645 66 --PSLGINFtlYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 156 MCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNgvnLFLANMcaLLLFL 235
Cdd:PRK12645 144 ISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSP---LFIPAM--ILILL 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 236 GPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDL 315
Cdd:PRK12645 219 GAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 316 KKGLAYSTMSQPGYMMLAPGIGS----------------YRAASFHLITHAYSKALLFLGSGSVIHSmepiVGyspekSQ 379
Cdd:PRK12645 299 KGILAFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TR 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 380 NMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKdEILVDSWIASASLGW------------IAWCTAGLTGFYMF 447
Cdd:PRK12645 370 DIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSK-EMFFESMLNATEANLfsldtwgvlfpvIAWVASVFTFVYSI 448
|
490
....*....|....
gi 124302952 448 RMYFVTFEGDFRGN 461
Cdd:PRK12645 449 IFIFKTFFGKYKPE 462
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-432 |
4.26e-67 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 237.42 E-value: 4.26e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 81 ISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYL 160
Cdd:PRK12649 70 AGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFM 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 161 LIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLANMcaLLLFLGPAAK 240
Cdd:PRK12649 150 LIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITL--ILIFIGAAAK 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLA 320
Cdd:PRK12649 228 SAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILA 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 321 YSTMSQPGYMMLA--------PGIGsYRAASFHLITHAYSKALLFLGSGSVIHSmepivgyspEKSQNMSFMGGLRKYMP 392
Cdd:PRK12649 308 YSTISQLAYLMTMygyttyhePGLG-VAAATFHLLNHATFKACLFLVAGIVAHE---------AATRDIRKLGGLRKEMP 377
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 124302952 393 ITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLG 432
Cdd:PRK12649 378 ITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIG 417
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
107-456 |
5.90e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 232.82 E-value: 5.90e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 107 VMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGD 186
Cdd:MTH00108 100 IMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGD 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 187 FGLllgILGTYWitgsFDIHSLSERFND--LIDSNGVNLFLanmcaLLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALI 264
Cdd:MTH00108 180 IGF---ILAMAW----FLLNLNSWDLQQifMLNPNNSNLPL-----MGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 265 HAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASF 344
Cdd:MTH00108 248 HSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFL 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 345 HLITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL--- 421
Cdd:MTH00108 328 HICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaa 399
|
330 340 350
....*....|....*....|....*....|....*....
gi 124302952 422 ----VDSWIASASLgwIAwctAGLTGFYMFRMYFVTFEG 456
Cdd:MTH00108 400 ntsyTNAWALLITL--IA---TSLTAAYSTRIIFFALLG 433
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-708 |
1.98e-65 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 217.48 E-value: 1.98e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 448 RMYFVTFEGDFRGNLS-YKDTDKSVSY-KSIWGNlqtlsERDKVFSNN-----SYTSFSDPTGDFyeipenvFSLPERRI 520
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQnYSGKKNSSFYsISLWGK-----EGSKLINKNfrtllLLTMNNNEKVSF-------FSKKTYRI 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 521 KNKSLNIEKSFNVLSDFkgsDNRNEISedafvsinreirnenilYPNESDNSMLFSLISLAIPTLFIGFIGVPFSHKGIN 600
Cdd:pfam01010 69 DGNVRNMTRPFITITHF---DNKKTFS-----------------YPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGID 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 601 SDLLSDLLAPLTDSFHKD--NSENLVDFFLKSIPSVSIALVGVSISFFIYGPVSS----RDLRKEIDPKT--KDFLGYFF 672
Cdd:pfam01010 129 LDILSKWLTPSINLLHKNsnNSVDWYEFVTNAIFSVSIAYFGIFIASFLYKPVYSsfqnLDLINSFVKKGpkRIFLDKII 208
|
250 260 270
....*....|....*....|....*....|....*.
gi 124302952 673 NSLSNWSYYRGYIDNLYNVIFIEGTRILSKSICFFD 708
Cdd:pfam01010 209 NVIYNWSYNRGYIDVFYTTSFTRGIRGLAELTHFFD 244
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-441 |
9.97e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 224.42 E-value: 9.97e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 46 FLLGIAMFISFsiFW---QQIRGNPNHQLLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHD-QGY 121
Cdd:PRK12644 28 YVLALVPAAAF--VWvlaQWPAVLAGGAPTEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 122 VRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGI--LGTywI 199
Cdd:PRK12644 106 GRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIiiLGQ--A 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 200 TGSFdihSLSERFNDLIDSNGVNLFLAnmcalLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVAR 279
Cdd:PRK12644 184 AGTY---RLSELLADPPTGPAVSVAVV-----LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVAR 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 280 MFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSyRAASFH----LITHAYSKAL 355
Cdd:PRK12644 256 LAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGT-RDAALAglamLLAHALFKAA 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 356 LFLGSGSVIHSmepiVGyspekSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKdEILVDSWIASASLGWIA 435
Cdd:PRK12644 335 LFLVVGIIDHS----TG-----TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK-EAALEAVLHDGALGPAG 404
|
....*..
gi 124302952 436 -WCTAGL 441
Cdd:PRK12644 405 pVVLAGI 411
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
81-458 |
4.01e-59 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 215.00 E-value: 4.01e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 81 ISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYV-RFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSY 159
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 160 LLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNgvnLFLANMcaLLLFLGPAA 239
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHG---LFIPMI--FMFLLGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGL 319
Cdd:PRK12646 223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 320 AYSTMSQPGYMMLAPGIG-----------------SYRAASFHLITHAYSKALLFLGSGSVIHSmepivgyspEKSQNMS 382
Cdd:PRK12646 303 AYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE---------AGTRDIR 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 383 FMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKD----------EILVDSWIASASLGWIAWCTAGLTGFYMFRMYFV 452
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKE 453
|
....*.
gi 124302952 453 TFEGDF 458
Cdd:PRK12646 454 VFWGKY 459
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
19-470 |
2.06e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 208.46 E-value: 2.06e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 19 SMSVGLGLFFFpkatkslrrICAIISIFLLGIAMFISFSIFwqqirgnpnhqLLWSWFFNKDISLQIGFLIDPLTSTMLV 98
Cdd:MTH00165 2 SMCLISFFFLF---------FLSLILFFLGLYFLLNDYSLF-----------IEWELFSLNSSSIVMTFLFDWMSLLFMS 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 99 SVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIgFWFSRPSAANACQKA 178
Cdd:MTH00165 62 FVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLT 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 179 FITNRVGDFGLLLGIlGTYWITGSFDIHSLSERFNdlidsngvNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPT 258
Cdd:MTH00165 141 ALSNRIGDVAILLSI-AWMMNFGSWNFIFYLDFMK--------NSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPT 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 259 PISALIHAATMVAAGIFFVARmFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGS 338
Cdd:MTH00165 212 PVSALVHSSTLVTAGVYLLIR-FNNLLFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGF 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 339 YRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKD 418
Cdd:MTH00165 291 PKLAFFHLLTHALFKALLFLCAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKD 362
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 419 EILvdswiASASLGWIAW--------CTaGLTGFYMFRMYFVTFEGDFRGNLSYKDTDKS 470
Cdd:MTH00165 363 LIL-----EMVSMSNLNFfifflfffST-GLTVSYSFRLIYYSMSGDFNLKSLNNLSDES 416
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
42-469 |
3.88e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 199.10 E-value: 3.88e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 42 IISIFLLGIAMFISFSIFwqqIRGNPNHQLLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGY 121
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIF---MWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 122 VRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAAnACQKAFITNRVGDFGLLLGILGTYWItG 201
Cdd:MTH00209 83 KRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLS-AGMLTALTNRVGDALLILSIAWMLMH-G 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 202 SFDIHSLSERFNdlidsngvnlFLANMCALLLfLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMF 281
Cdd:MTH00209 161 NWNIFYLNFNSN----------LGSVISVLIV-LAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 282 HFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSG 361
Cdd:MTH00209 230 PSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 362 SVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL---VDSWIASASLGWIAWCT 438
Cdd:MTH00209 310 NIIHSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILesmLESNMPIMTLILMFLST 381
|
410 420 430
....*....|....*....|....*....|...
gi 124302952 439 aGLTGFYMFRMYFVTFEG--DFRGNLSYKDTDK 469
Cdd:MTH00209 382 -SLTAAYSMRLSYFSLWGpnSSKSLNSSFDQNK 413
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
41-449 |
3.03e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 194.21 E-value: 3.03e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 41 AIISIFLLGIAMFIsFSIFWQQIrgnpNHQLLWSWFFNKDISLQIGF--LIDPLTstMLVSVTSVGIL--VMIYSDSYMS 116
Cdd:MTH00207 10 ASYLLWFMSILMFP-LSLYLMMC----NKTILIEWEIFTISSSPINFtiILDPTG--TLFSSTVLFISanVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 117 HDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIgFWFSRPSAANACQKAFITNRVGDFGLLLGILGT 196
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGWT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 197 ----YWITgsfdIHSLSERFNDLIdsngvnlflanmcALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 272
Cdd:MTH00207 162 lnqgHWSI----TNMWQTDMNNYI-------------ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 273 GIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYS 352
Cdd:MTH00207 225 GVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALF 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 353 KALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLG 432
Cdd:MTH00207 305 KALLFVCAGSLIHSH--------HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSL 376
|
410
....*....|....*....
gi 124302952 433 WIA--WCTAGLTGFYMFRM 449
Cdd:MTH00207 377 MILmiFLATALTAAYSTRF 395
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
107-471 |
3.41e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 193.91 E-value: 3.41e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 107 VMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFiTNRVGD 186
Cdd:MTH00151 70 VFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGD 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 187 FGLLLGIlgtywitGSFdihSLSERFNdlIDSNGVNLFLANMCaLLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHA 266
Cdd:MTH00151 149 VLILLSI-------ALL---VLLGHWS--ILSMWDFKLSGWLG-LLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 267 ATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHL 346
Cdd:MTH00151 216 STLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 347 ITHAYSKALLFLGSGSVIHSMepivgyspEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKD---EILVD 423
Cdd:MTH00151 296 YTHALFKALLFLCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDlilESSLM 367
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 124302952 424 SWIASASLGWIAWCTaGLTGFYMFRMYFVTFEGDFRGNLSYKDTDKSV 471
Cdd:MTH00151 368 SPTSLLMVLLMFVGV-GLTALYSARLSFCLVWGSMKSSSLSSKSDEDF 414
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
15-464 |
1.03e-52 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 190.68 E-value: 1.03e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 15 PFVAsmsvGLGLFFFPK-ATKSLRRICAIISI--FLLGIAMFISFSifwqqiRGNPNHQLL--WSWFFNKDISLQIGflI 89
Cdd:COG1008 13 PLLG----ALLLLLLPRrNARLARWVALAVSLltLLLSLYLLAGFD------PGTGGFQFVesYPWIPSLGISYHLG--V 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 90 DPLTSTMLVSVTSVGILVMIYSDSYMSHDQGyvRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFS-- 167
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGer 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 168 RPSAANacqKAFITNRVGDFGLLLGILGTYWITG--SFDIHSLSErfndlidsNGVNLFLANMCALLLFLGPAAKSAQFP 245
Cdd:COG1008 159 RIYAAI---KFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAA--------APLPLTAQLLLFLAFFIAFAVKVPMFP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 246 LHVWLPDA-MEGPTPISAlIHAATMVAAGIF----FVARMFHffEALPFTMNIISWVGGITALLGATIALAQKDLKKGLA 320
Cdd:COG1008 228 FHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYgllrFALPLFP--EASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 321 YSTMSQPGYMMLapGIGSYRA-----ASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITG 395
Cdd:COG1008 305 YSSVSHMGFVLL--GIFALNPlglqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLA 373
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124302952 396 TTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMYFVTFEGDFRGNLSY 464
Cdd:COG1008 374 ALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAE 442
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
28-456 |
4.01e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 189.92 E-value: 4.01e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 28 FFPKATKSLRRICAIISIFLLGIAMFISFSIFWQQ-----IRGNPNHQLLWSwFFNKDISLQIGFLIDPLTSTMLVSVTS 102
Cdd:PRK08376 23 IVSLLGGKAREIWAVLISFLTLIVALLVFYEVWNNgtivyVLGAESPTLTLP-FGSGGFPIRIIWEVDLFGAFMALIATI 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 103 VGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITN 182
Cdd:PRK08376 102 VSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 183 RVGDFGLLLGILGTYWITGSFDIHSLSERFNDlidsngvNLFLANMCALLLFLGP-AAKSAQFPLHVWLPDAM-EGPTPI 260
Cdd:PRK08376 182 SLASSMVLLGIALLYGQYGTLNMAYLAVKMSE-------NPTVVAKIALALFIAGlAMKSGAVPVHMWLPDAYpAAPSSI 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 261 SALIHAATmvAAGIFFVARMFHFFEALPFTMNIISWV----GGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGI 336
Cdd:PRK08376 255 SAMLLVIK--QAGLYALARVLFSIYGPAINLATVGWViiilGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGV 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 337 G---------------SYRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLG 401
Cdd:PRK08376 333 GlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGLARTMPKTTIAFLIG 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 124302952 402 TLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMYFVTFEG 456
Cdd:PRK08376 404 AAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
95-447 |
7.00e-52 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 195.26 E-value: 7.00e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 95 TMLVSVtsVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFwfSRPSAANA 174
Cdd:PRK12650 85 ALLALV--IGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 175 CQKAFITNRVGDFGLL--LGILGTywITGSfdiHSLSERFNDliDSNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPD 252
Cdd:PRK12650 161 SIRTLILTFFGGLTLLaaVAIAAT--QTGT---TSLSGILHS--DVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPE 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 253 AMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMML 332
Cdd:PRK12650 234 AMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVA 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 333 APGIGS---YRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIP 409
Cdd:PRK12650 314 TIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQA---------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 124302952 410 PFACFWSKDEILVDSWIA--SASLGWIAWCTAGLTGFYMF 447
Cdd:PRK12650 385 PLFGFVSKEGMLTAFLEApgGNAGVVLLLVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
24-456 |
1.04e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 185.56 E-value: 1.04e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 24 LGLFFFP---KATKSLRRICAIISIFLLGIAMFISFSIFWQQIR-GNPNHQLLWSWFFNKDISLQIgfliDPLTSTMLVS 99
Cdd:PRK12667 15 LFAFLLPllsILLKGNRKIQKIYALLVSLITLILSILLFIQVYSsNKPIVYLFGGWPAPIGIVYEV----DLLGALLGLL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 100 VTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAF 179
Cdd:PRK12667 91 TALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 180 ITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLANMCALLLFLGPAA-----KSAQFPLHVWLPDAM 254
Cdd:PRK12667 171 LIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALwaftiKAAIFPNHFWLPDAH 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 255 -EGPTPISALIhAATMVAAGIFFVAR-MFHFFEALPFTMNIISWV-------GGITALLGATIALAQKDLKKGLAYSTMS 325
Cdd:PRK12667 251 pAAPSPVSAML-SGLVVNVGAYAIIRfLYTIFGISPSLIDFRAALspiliilGAVSAIIGALMMVVQKDVKRLLAYSTIS 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 326 QPGYMMLAPGIGS---YRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLGT 402
Cdd:PRK12667 330 HMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLIGA 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 403 LSLCGIPPFACFWSKdEILVDSWIAS--ASLGWIAWCTAGLTGFYMFRMYFVTFEG 456
Cdd:PRK12667 401 LSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
37-435 |
3.42e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 180.85 E-value: 3.42e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 37 RRICAIISIFLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNkdisLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMS 116
Cdd:PRK08375 27 RRLRWALALLVAALTFALAISLLPQVLDGGVIAYVVGGWPPG----IGIELRADSLSALFLLVTSILAIAALLYAIGYGE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 117 HDQgyVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFwfSR-PSAANACQKAFITNRVGDFGLLLGILG 195
Cdd:PRK08375 103 HRQ--TRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM--GGdRRALAAARKYLIVGLIGSTFLLIGVGL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 196 TYWITGSFDIHSLSERFNDlidSNGVNLFLAnmcalLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 275
Cdd:PRK08375 179 LYGVTGTLNMADLAGALAE---NPTVVTAFG-----FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVY 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 276 FVAR-MFHFFEALPFT----MNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYR---AASFHLI 347
Cdd:PRK08375 251 ALIRiYFTVFGGDFRFalglGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLalaAGLLHLL 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 348 THAYSKALLFLGSGSVihsmepivgYSPEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVdswiA 427
Cdd:PRK08375 331 HHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVV----G 397
|
....*...
gi 124302952 428 SASLGWIA 435
Cdd:PRK08375 398 AVEAGQWL 405
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
87-460 |
1.37e-44 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 170.84 E-value: 1.37e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 87 FLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGY--VRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGF 164
Cdd:PRK06521 76 LRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 165 WFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSErfndlidsngVNL--FLANMCALLLFLGPAAKSA 242
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRA----------AHLspFWASLVFLLALFGFGAKAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 243 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFFVARMfhffeALPFTMNIISW-------VGGITALLGATIALAQKD 314
Cdd:PRK06521 226 LVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRV-----VFDLLGAPGWWwgvlvlaLGAISAVLGVLYALAEHD 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 315 LKKGLAYSTMSQPGYMMLAPGIG--------------SYRAASFHLITHAYSKALLFLGSGSVIHSMEpivgyspekSQN 380
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRD 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 381 MSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKdEILVDSWIASASLG-W------------IAwCTAGLTGFYMF 447
Cdd:PRK06521 371 MEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE-WLLLQSLLSSPGLPqWglklavpiaaamLA-LTAALAAMCFV 448
|
410
....*....|...
gi 124302952 448 RMYFVTFEGDFRG 460
Cdd:PRK06521 449 KFYGITFLGRPRS 461
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
34-451 |
1.59e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 149.50 E-value: 1.59e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 34 KSLRRICAIISIFLLGIAMFIsfsifwqqirgnpnhqLLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDS 113
Cdd:COG1007 29 RRSRRLLAGLALLGLLLALAL----------------LLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 114 YMSHDQGYVRFFAYLSLF-TASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITnrvGDFG---L 189
Cdd:COG1007 93 YLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLL---GALSsgfL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 190 LLGILGTYWITGSFDIHSLSERfndlIDSNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEG-PTPISALIHAAT 268
Cdd:COG1007 170 LYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAP 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 269 MVAAgIFFVARMFH--FFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMML---APGIGSYRAAS 343
Cdd:COG1007 246 KIAA-FAALLRLLVeaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLglaAGTPLGVSAAL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 344 FHLITHAYSKALLFLgsgsVIHSMEpivgYSPEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVD 423
Cdd:COG1007 325 FYLLAYLFMNLGAFA----VILLLS----RKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSA 396
|
410 420 430
....*....|....*....|....*....|....*
gi 124302952 424 SWiaSASLGW---IAWCTAGLTGFYMFR----MYF 451
Cdd:COG1007 397 AV--EAGLYWlavIAVLNSVISAYYYLRvvkaMYF 429
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
1.13e-36 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 145.23 E-value: 1.13e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 10 IVPVCPFVASMSVGLGLFFFPKATKSLRRICAIISIFLLGIAMFiSFSIFwqqirgnpnhQLLWSWFFNKDISLqigfli 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALL-GLVLF----------ATGAAWPAAAWLEV------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 90 DPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 170 SAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERfndlIDSNGVNLFLAnMCALLLFLGPAAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH----LAAQGASPSLQ-AAALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 250 LPDAMEGPTPISALIHAAtMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 124302952 330 MMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
23-456 |
1.36e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 144.31 E-value: 1.36e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 23 GLGLFFFPKATKSLRRICAIISIFLLGIAMFIsfsIFWQQIRGNPNHQLL--WSWFFNKDISLQIGflIDPLTSTMLVSV 100
Cdd:TIGR01972 12 ALLILLLPSNKDGKARWIALVVALATLLLSLL---LLFQFDPTGSGFQFTedIPWIPALGISYHLG--VDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 101 TSVGILVMIYSDSYMSHDQGYvrFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWfSRPSAANACQKAFI 180
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 181 TNRVGDFGLLLGILGTYWITG-SFDIhslsERFNDLIDSNGVNLFLanmcALLLFLGPAAKSAQFPLHVWLPDAM-EGPT 258
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTFDL----LELLNLPLPFGVQTWL----FLAFFIAFAVKVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 259 PISALIHAATM-VAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIG 337
Cdd:TIGR01972 236 AGSVILAGVLLkMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSF 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 338 SYRA---ASFHLITHAYSKALLFLGSGSVihsmepivgYSPEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACF 414
Cdd:TIGR01972 316 NELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 124302952 415 WSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMYFVTFEG 456
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-417 |
4.44e-36 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 144.75 E-value: 4.44e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 34 KSLRRICAIISIFLLGIamfisFSIFWQQIRGNPNHQLLWSWFFNKDISLQIGFLIDPLTSTMLVsvtsVGILVMIYSDS 113
Cdd:PRK08668 21 KKINEKIGVIGNALPLL-----FLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLL----VIFSVAFFMVS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 114 YMSHDQGYVRFFAYLSLftASMLGLVLSPNPVQIYIFWELVGMCSYLLI--GFWFSRpsaaNACQKAFITNRVGDFGLLL 191
Cdd:PRK08668 92 EKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMVpmGKKESR----KASLKYFVLSAIGAYAMLY 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 192 GILGTYWITGSFDIHSLSERF-NDliDSNGVNLFLAnmcaLLLFLGPAAKSAQFPLHVWLPDAM-EGPTPISA-----LI 264
Cdd:PRK08668 166 AIFLIYAKTGTFDFADISQGLiND--TSTGFALIVF----LFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAvlsgqLS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 265 HAATMVAAGIFFVARMFHFFEALPFTMN------IISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIG- 337
Cdd:PRK08668 240 KLGAYGFLLVLYVLPGTKLFSEFGTYRGvplfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGt 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 338 --SYRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFW 415
Cdd:PRK08668 320 slGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFA 390
|
..
gi 124302952 416 SK 417
Cdd:PRK08668 391 SK 392
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
8-436 |
5.04e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 142.40 E-value: 5.04e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 8 IWIVpvCPFVasmsVGLGLFFFPKATKSLRRICAIISiFLLGIAMFISFSIFWQQIRGNpnhqllwswffnkdisLQIGF 87
Cdd:PRK07234 7 VWIA--LPFL----LGFAIYLLPKLDRNLALGMAIVS-AVYALGLVASMVPLELTLLDN----------------FGVTL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 88 LIDPLTSTMLVSVTSVGILVMIYSdsyMSHDQgyVRFFAYLSLFTASMLGLV-LSPNPVQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK07234 64 RADALSGYFILTNALVTLAVIFYC---WESAK--TRFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLLVAYPR 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 167 SRPSAANACQKAFITNRVGDFgLLLGILGTYWITGSFDIHSLSErfndlidsngvnlflANMCAL-LLFLGPAAKSAQFP 245
Cdd:PRK07234 139 TDRAIWVGLRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLAT---------------ADPEAFaLIALGLLVKGGIFV 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 246 LHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALpftMNIISWVGGITALLGATIALAQKDLKKGLAYSTMS 325
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGL---DLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTIS 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 326 QPGYMMLAPGIGsyraaSFHLITHAYSKALLFLGSGSVihsmepivgYSPEKSQNMSFMGGLRKYMPITgttflLGTLSL 405
Cdd:PRK07234 280 QLGFILAAPLVG-----GLYALAHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSI 340
|
410 420 430
....*....|....*....|....*....|.
gi 124302952 406 CGIPPFACFWSKDEILvdswiaSASLGWIAW 436
Cdd:PRK07234 341 AGFPLLAGFVSKVLTL------KNLLPWQAI 365
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
24-431 |
5.37e-35 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 141.79 E-value: 5.37e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 24 LGLFFFPKATKSLRRI-CAIISIFLLGIAMfiSFSIFWqqirGNPNHQLLWSWFfnkdISLQIGFLIDPLTSTMLVSVTS 102
Cdd:PRK08667 19 IPLVFRHKRKRVWQSVlWLVIAIALLLFAG--SLQLFT----GNPLDIPLWGIA----PGLDITFHIDRLAAFFIILIGL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 103 VGILVMIYSDSYMSHDQGYVR---FFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAF 179
Cdd:PRK08667 89 VSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 180 ITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLidsngvnlflaNMCALLLFLGPAAKSAQFPLHVWLPDAMEG-PT 258
Cdd:PRK08667 169 VMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL-----------SLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 259 PISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLapGIGS 338
Cdd:PRK08667 238 NVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILM--GIGL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 339 Y----------------RAASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLGT 402
Cdd:PRK08667 316 YvifgvygldtlallalGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSALFLVGA 386
|
410 420
....*....|....*....|....*....
gi 124302952 403 LSLCGIPPFACFWSkDEILVDSWIASASL 431
Cdd:PRK08667 387 VSIAALPPFNGFAS-ELLLYESFFQSFSV 414
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
24-421 |
3.64e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 137.26 E-value: 3.64e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 24 LGLFFFPKATKSLRRICAIISIFLLGIAMFISfsIFWQQirgnPNHQllwSWFFNKDISLQIGFLIDPLTSTMLVSVTSV 103
Cdd:PRK06589 25 TSPFATKKDSFIRNFLLITISIFFFGNILLID--LLFLK----GIRA---QFELMDFGNYSIGLHLEPLGLIFLLLIGFL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 104 GILVMIYSDSYMSHD--QGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFIT 181
Cdd:PRK06589 96 WICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKIL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 182 NRVGDFGLLLGILGTYWITGSFDIHSlserfndlidsNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:PRK06589 176 MISALLLFLPAVILIYTKTGNLDFVS-----------GGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 262 ALIHAATMVAAGIFFVARM------FHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPG 335
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKIllyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 336 I---GSYRAASFHLITHAYSKALLFLGSGSVihsmepivgYSPEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFA 412
Cdd:PRK06589 325 IltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFS 395
|
....*....
gi 124302952 413 CFWSKDEIL 421
Cdd:PRK06589 396 GFISKFLIL 404
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
15-450 |
4.52e-34 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 136.87 E-value: 4.52e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 15 PFVAsmsvGLGLFFFPKATKSLRRICAIIS---IFLLGIAMFISFSifwqqiRGNPNHQLLW--SWFFNKDISLQIGflI 89
Cdd:PRK05846 13 PLIG----GLLVLLTERFGARLARWIALIGtllTLLLSLVLWIGFD------SSNAGFQFVEkhPWIPRFGISYHLG--V 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 90 DPLTSTMLVSVTSVGILVMIYSdsyMSHDQGYVRFFAYLSLFTAS-MLGLVLSPNPVQIYIFWE--LVGMcsYLLIGFW- 165
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLAS---WEEIKKRVKFYMAALLWLEGgVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWg 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 166 -FSRPSAANacqKAFITNRVGDFGLLLGILGTYWI----TGSFDIHSLSErfndlidsNGVNLFLANMCALLLFLGPAAK 240
Cdd:PRK05846 156 gKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLN--------LPLPPGVQYWLFLAFFIAFAVK 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF----FVARMF----HFFEALPFTMNIISWVggitalLGATIALAQ 312
Cdd:PRK05846 225 MPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgllrFSLPLFpdasHEFAPIIITLGVIAII------YGALVALAQ 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 313 KDLKKGLAYSTMSQPGYMMLAPGIGSYRAAS---FHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFMGGLRK 389
Cdd:PRK05846 299 TDIKKLIAYSSISHMGFVTLGIFAGNQLGIQgaiFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAK 369
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124302952 390 YMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMY 450
Cdd:PRK05846 370 VMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
42-454 |
1.35e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 136.20 E-value: 1.35e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 42 IISIFLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNKDISLQIGFLIdpltstMLVSVTSVGILVMIYSDSYMSHDQGY 121
Cdd:MTH00095 2 NILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLL------FSLILLLVTLSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 122 VRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGF---WFSRPSAANAcqkaFITNRVGDFGLLLGILGTYW 198
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFynnWDSNSGAMNT----ALTNRIGDFFIFLFFSGFIF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 199 ITGSFdihsLSErfndlidsngvnLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVA 278
Cdd:MTH00095 152 SSYYF----FSF------------SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLM 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 279 RMFHFFEALPFtMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFL 358
Cdd:MTH00095 216 NFSYLILNMNV-MKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFM 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 359 GSGSVIHSMepivgYSPEKSQNMSFMGGLRKYMPItgtTFLLGTLSLCGIPPFACFWSKDEILVDSWIASAS--LGWIAW 436
Cdd:MTH00095 295 QVGYLIHSN-----FGQQDGRNYSNNGNLPMFIQL---QLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMifFSLMFF 366
|
410
....*....|....*...
gi 124302952 437 CTAGLTGFYMFRMYFVTF 454
Cdd:MTH00095 367 FSVFLTFGYSYRLWKSFF 384
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
127-422 |
1.59e-33 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 135.28 E-value: 1.59e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 127 YLSLFTASMLG---LVLSPNPVQIYIFWELVGMCSYLLIGFWFSRpSAANACQKAFITNRVGDFGLLLGILGTYWITGSF 203
Cdd:PRK08377 110 YAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 204 DIHSLSERfndlidSNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFFVARMFH 282
Cdd:PRK08377 189 NMAHIAQL------AGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 283 FFEALPFTMNIISWV---GGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGS---YRAASFHLITHAYSKALL 356
Cdd:PRK08377 262 LMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 357 FLGSGSVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILV 422
Cdd:PRK08377 342 FLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIL 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-437 |
6.76e-33 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 133.52 E-value: 6.76e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 10 IVPVCPFVASMsvglgLFFFPKATKSLRRICAIISIFLLGIAMFISFsifwqQIRGNPNHQLLWSWFFnkdislqigflI 89
Cdd:PRK06458 9 LLLLIPLLASL-----LLFALRKRRLVATLNVLGITLTLILALWLVF-----TVPDAGEIFAAGLWFF-----------I 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 90 DPLTSTMLVSVTSVGILVMIYSDSYMSHDQ-------GYVRF-FAYLSLFTASMLGLVLSPNpvqIYIFW---ELVGMCS 158
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLyYGMYQLFLFTMLLALTSNN---LGLMWvaiEATTLSS 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 159 YLLIGFWFSRpSAANACQKAFITNRVGDFGLLLGILGTYW----ITGSFD---IHSLSERFNDLIDSNGVNLFLAnmcal 231
Cdd:PRK06458 145 ALLVGIYRTR-ASLEAAWKYIIICSVGVAFALFGTILVYAnaatVMGDGEmaiLWTELLKHASLLDPTLMKLAFV----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 232 LLFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAgIFFVARMFHFFEALP---FTMNIISWVGGITALLGAT 307
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIgsdFPGRLLLIFGLLSVLVAAF 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 308 IALAQKDLKKGLAYSTMSQPGYMMLAPGIGS---YRAASFHLITHAYSKALLFLGSGSVIHSMepivgyspeKSQNMSFM 384
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDINVI 368
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 124302952 385 GGLRKYMPITGTTFLLGTLSLCGIPPFACFWSkdEILVDSWIASASLGWIAWC 437
Cdd:PRK06458 369 RGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS--EFLILTAGLARGPLLIAIL 419
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
87-451 |
2.24e-32 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 131.48 E-value: 2.24e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 87 FLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVrfFAYLSLF-TASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFW 165
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE--FYLLVLFaLLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 166 FSRPSAANACQKAFItnrVGDFG---LLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLF-LANMCALLLFlgpaaKS 241
Cdd:PRK05777 147 RDRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFgLVFLLVGLAF-----KL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 242 AQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFFVARMFHF-FEALPFTMNIISWVGGI-TALLGATIALAQKDLKKG 318
Cdd:PRK05777 219 SAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVaFGGLSEDWQQVLAIIAIaSMLVGNLAALSQTNIKRL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 319 LAYSTMSQPGYMML---APGIGSYRAASFHLITHAYSKallfLGSGSVIHSMEPIVGYspekSQNMSFMGGLRKYMPITG 395
Cdd:PRK05777 298 LAYSSIAHAGYLLVglaAGTAEGYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGE----AESISDFAGLSKRSPLLA 369
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 124302952 396 TTFLLGTLSLCGIPPFACFWSKDEILVDSWiaSASLGWIAWC---TAGLTGFYMFR----MYF 451
Cdd:PRK05777 370 AVMTIFMLSLAGIPPTAGFWGKFYVFEAAV--EAGLWWLAVIgvlNSAIGAFYYLRviklMYF 430
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
9-436 |
2.49e-32 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 133.10 E-value: 2.49e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 9 WIVPVCPFVASMSVGLGLFFFPkatkslRRICAIISIFLLGIAMFISFSIfwqqirgnPNHQLLWSWFFNKDISLqigFL 88
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFLP------GRARKALLLLAPVLAVLAVLTV--------PEGTYLTVTFLGFDLVL---GR 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 89 IDPLTSTMLVSVTSVGILVMIYSdsymSHDQGYVRFFAYLsLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIgfWFSR 168
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAAL-LYVGSALGAVFAGDLLTLFVFWELMAFTSTFLV--WARG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 169 -PSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSErfndlidsngvnlfLANMCALLLFLGPAAKSAQFPLH 247
Cdd:PRK12668 138 tKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAG--------------LGGTAAWLILIGFGVNAAFPPLH 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 248 VWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALpftmniiSWVGGITALLGATIALAQKDLKKGLAYSTMSQP 327
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL-------IYIGAAMAVYGVFFALLENDLRRLLSYHIVSQV 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 328 GYMMLAPGIGSYRA---ASFHLITHAYSKALLFLGSGSVIHSmepiVGYSpeksqNMSFMGGLRKYMPITGTTFLLGTLS 404
Cdd:PRK12668 277 GYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGALS 347
|
410 420 430
....*....|....*....|....*....|..
gi 124302952 405 LCGIPPFACFWSKDEILvdSWIASASLGWIAW 436
Cdd:PRK12668 348 ISAFPLFSGFVSKSMII--SAAGEDHYVWVWL 377
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-417 |
8.33e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 124.29 E-value: 8.33e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 13 VCPFVASMSVGLGLFFFPKATKsLRRICAIISIFLLGIAMFISFSIFWQQirgNPNHQLLWSWffnkDISLQIGFLIDpL 92
Cdd:PRK07691 7 ILPILIPVITAILLIFLGKRPI-IQRYVALIGSLLTLVAAIILVANVYKH---GIQTLELGNW----KAPFGIVFVAD-M 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 93 TSTMLVSVTS-VGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSA 171
Cdd:PRK07691 78 FAALLVLTSSiITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 172 ANACqKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVnlfLANMCALLLFLGPAAKSAQFPLHVWLP 251
Cdd:PRK07691 158 RESI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 252 DAMEGP-TPISALIhAATMVAAGIFFVARMFH--FFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPG 328
Cdd:PRK07691 234 GSYYAPpIAIAALF-GALLTKVGVYAIARTFTlfFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 329 YMMLAPGIG---SYRAASFHLITHAYSKALLFLGSGSVIHsmepIVGYSPEKSqnmsfMGGLRKYMPITGTTFLLGTLSL 405
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410
....*....|..
gi 124302952 406 CGIPPFACFWSK 417
Cdd:PRK07691 384 AGIPPLSGFYGK 395
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
6-457 |
2.35e-29 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 122.75 E-value: 2.35e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 6 KNIWIVPVC-PFVasmsVGLGLFFFPKATKSLRR--ICAIISIFLLGIAmfisfsifwqqirgnpnhqLLWSWFFNKDIS 82
Cdd:PRK12663 3 SNLLILPMLlPLL----CGLVLVFLRNRDRLQRYlaIGTLTILTLISLA-------------------LLIYVQRHGPIT 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 83 LQIG---------FLIDpLTSTMLVSVTS-VGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWE 152
Cdd:PRK12663 60 LDFGgwlppfgiqFTGD-SLSALMVTTASfVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 153 LVGMCSYLLIGFWFSRPSAANACQKAFItNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNlflanMCALL 232
Cdd:PRK12663 139 VMLIASFVLITLGQEREQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLT-----TIALL 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 233 LFLGPAAKSAQFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFFVARMFH--FFEALPFTMNIISWVGGITALLGATIA 309
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTllFPQERELLHPLLATMAAITMVIGALGA 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 310 LAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRA---ASFHLITHAYSKALLFLGSGSVIHsmepIVGYSpeksqNMSFMGG 386
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGYR-----SLQYLGG 361
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 124302952 387 LRKYMPITGTTFLLGTLSLCGIPPFACFWSKdeilvdSWIASASLGWIAWCTAG-------LTGFYMFRMYFVTFEGD 457
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGK------VLLVQGALDNGAYILLAlmlitslITMYSLFRIFFLAYWGD 433
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
37-449 |
7.30e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 118.30 E-value: 7.30e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 37 RRICAIISIFLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNKDISLQIgfliDPLTSTMLVSVTSVGILVMIYSdSYMS 116
Cdd:PRK12662 26 RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELRV----DILSATMLVLVNFIAVMSVLYG-IYPN 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 117 HDQGYV----RFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQkAFITNRVGDFGLLLG 192
Cdd:PRK12662 101 RKEISVnkipSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFE-YLIIGTIGATFYLIG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 193 ILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLanmcaLLLFLGPAAKSAQFPLHVWLPDAM-EGPTPISALIhAATMVA 271
Cdd:PRK12662 180 IGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGV-----LFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 272 AGIFFVARMFH-------FFEALPFTMNIISwVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYR---A 341
Cdd:PRK12662 254 VMIYLIIRIVYdvfkanfVFTTLPFNNVFMI-LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaA 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 342 ASFHLITHAYSKALLFLGSGSVIHSMEpivgyspekSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL 421
Cdd:PRK12662 333 AVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
410 420
....*....|....*....|....*....
gi 124302952 422 VDSWIASASLGWIAWCT-AGLTGFYMFRM 449
Cdd:PRK12662 404 DAFIKSNAWIGLVVLLVgSGLSVIYVWKI 432
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
71-476 |
7.91e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.50 E-value: 7.91e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 71 LLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLF-TASMLGLVLSPNPVQIYI 149
Cdd:TIGR01770 50 FLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFaLLGIFLLVSSNDLLSIYL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 150 FWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGvnlfLANMC 229
Cdd:TIGR01770 130 GLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNIS----LLLLG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 230 ALLLFLGPAAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWVGGI-TALLGAT 307
Cdd:TIGR01770 206 IVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFlSMLIGNF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 308 IALAQKDLKKGLAYSTMSQPGYMM---LAPGIGSYRAASFHLITHAYSKALLFlgsgSVIHSMEpivGYSPEKSQNMSFM 384
Cdd:TIGR01770 286 GALAQKKVKRLLAYSSISHVGYILiglLAGTLEGIKAVLFYIFIYALMSLGAF----GVLSLLR---SYKDEWIEYISDF 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 385 GGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASA-SLGWIAWCTAGLTGFYMFR----MYFVTFEGDFR 459
Cdd:TIGR01770 359 AGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLyWLAVIAVLTSVIGAFYYLRvvkvMYFDKPERRIP 438
|
410
....*....|....*..
gi 124302952 460 GNLSYKDTDKSVSYKSI 476
Cdd:TIGR01770 439 SNPQSKAQSLLLSISAL 455
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
37-409 |
8.69e-25 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 109.02 E-value: 8.69e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 37 RRICAIISIFLLGIAMFISfsifWQQIRGNPNHQLLWSWFFNKDISLQIGFLIDPLTSTMLVsVTSVGILVMIYSDSYMS 116
Cdd:PRK06473 29 RSVALVIASVLLLLSLVLA----FQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGLSLPLLV-LNSLLTLIAIYSSDESI 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 117 HDQGYvrFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWfSRPSAANACQKAFITNRVGDFGLLLGILGT 196
Cdd:PRK06473 104 QRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 197 YWITG--SFDIHSLserfndlidsNGVNLFLANMCALL--LFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVA 271
Cdd:PRK06473 181 VWLSGasSFDYEPL----------RSHTLPLSTQLLLLapILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLK 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 272 AGIFFVAR--MFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIG---SYRAASFHL 346
Cdd:PRK06473 250 LGTYGLLRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQM 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 347 ITHAYSKALLFLGSGSVihsmepivgYSPEKSQNMSFMGGL---RKYMPITGTTFLLGTLSLCGIP 409
Cdd:PRK06473 330 ISHGLISALLFLLVGVV---------YKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIP 386
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
76-386 |
5.37e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 103.58 E-value: 5.37e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 76 FFNKDISLQIG-FLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELV 154
Cdd:PRK08601 56 LIGANGDVVVGpWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGAT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 155 GMCSYLLIG---FWFSRPSAANACQKAFItnrVGDFGLLLGILGTYWITGSFDIHSLserfndLIDSNGVNL-----FLA 226
Cdd:PRK08601 136 LLGLTLLIGlnkGWKVAREAAKISGMLFL---ISWLALALAIVWLFIATGEWQLTSV------LSNENLAQLgtwekTGI 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 227 NmcaLLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFV--ARMFH--FFEALPFtmnIISWvggITA 302
Cdd:PRK08601 207 N---LLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTrfSPLFHddIAQILLL---IFAS---ISV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 303 LLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMEpIVGYSPEKSQNMS 382
Cdd:PRK08601 278 LIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLW 356
|
....
gi 124302952 383 FMGG 386
Cdd:PRK08601 357 IVVG 360
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
5.62e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 97.26 E-value: 5.62e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 44 SIFLLGIAMFISFSIFwqqIRGNPNHQLLWSWFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFL---FLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 124 FFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAanacQKAFIT---NRVGDFGLLLGILGTYWIt 200
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSL----RASVVTlvsSRFGDVCLFLLIGLSCWG- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 201 gsfdihslserfndlidsnGVNLFLanmCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVAR- 279
Cdd:MTH00063 153 -------------------GSGSFL---CCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRy 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 280 --MFHFFEALPFtmniISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLF 357
Cdd:MTH00063 211 dyLLGFSWLSIF----FSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLF 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 358 LGSGSVihsmepIVGYSPEKSQNMSFMGGLRKYMPITGTTFLLgtLSLCGIPPFACFWSKDEIL--VDSWIASASLGWIA 435
Cdd:MTH00063 287 MLVGDV------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLssFSSVVFNVSLLLVV 358
|
410
....*....|....*....
gi 124302952 436 WCTAGLTGFYMFRMYFVTF 454
Cdd:MTH00063 359 ILCVFLSYLYSFRLCLILF 377
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-436 |
2.87e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 95.04 E-value: 2.87e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 85 IGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVrffAYLSLFTASMLGLV-------LSPNPVQIYIFWELVGMC 157
Cdd:PRK12665 70 ITLVVDRLSALMLVVSSVVLLAVLVYAIGQGIRDGDEE---QPVSIFLPTYLILVagvsnafLAGDLFNLYVGFEILLVA 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 158 SYLLIGFwfsRPSAAN--ACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLanmcalLLFL 235
Cdd:PRK12665 147 SYVLLTL---GATAARvrAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFA------VLLV 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 236 GPAAKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFFVARMfhffEALPFTM----NIISWVGGITALLGATIAL 310
Cdd:PRK12665 218 AFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRT----HTLLFPGggldTLLMVVALLTMVVGILGAI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 311 AQKDLKKGLAYSTMSQPGYMMLAPGIGS---YRAASFHLITHAYSKALLFLGSGSVihsmEPIVGyspekSQNMSFMGGL 387
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLGGL 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 124302952 388 RKYMPITGTTFLLGTLSLCGIPPFACFWSKdEILVDSWIASASlgWIAW 436
Cdd:PRK12665 364 AKASPLLAVLFFVPALNLGGIPPFSGFIGK-VALLEAGAEDGT--WLAW 409
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
85-417 |
7.69e-20 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 93.56 E-value: 7.69e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 85 IGFLIDPLTSTMLVSVTSVGILVMIysdSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIgF 164
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLV-I 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 165 WFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIhslSERFNDLIDSNGVNLFLanMCALLLFLGPAAKSAQF 244
Cdd:PRK06277 142 ASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNI---TDIHNALLVNPTSPVIY--GGLLLLIFGLLYGSGLP 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 245 PLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFFVaRMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLA 320
Cdd:PRK06277 217 PFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLA 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 321 YSTMSQPGYMMLAPGIG---SYRAASFHLITHAYSKALLFLGSGSVihsmepivgYSPEKSQNMSFMGGLRKYMPITGTT 397
Cdd:PRK06277 296 YHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFM 366
|
330 340
....*....|....*....|
gi 124302952 398 FLLGTLSLCGIPPFACFWSK 417
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
87-446 |
1.27e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 92.90 E-value: 1.27e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 87 FLIDPLTSTMLVSVTSVGILVMIYSDSYMSH-------DQGYVR-FFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCS 158
Cdd:PRK08676 59 LFIDHLGIFVVLIASVVFILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 159 YLLIGFWFSRPSAANACQKAFITNRVGDFGLLlGILGTYWIT------GSFDIHSLSERFNDLidSNGVnLFLAnmcALL 232
Cdd:PRK08676 139 AMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHASLL--SPSV-LGAS---FLF 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 233 LFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFFVARMF---HFFEALPFTMNIISWVGGITALLGATI 308
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSallRQSGAAEQFSNVLIGLGIFSIAVAAFS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 309 ALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRA---ASFHLITHAYSKALLFLGSGsVIHSMepivgyspEKSQNMSFMG 385
Cdd:PRK08676 291 MLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDRFDRIF 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 386 GLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDS-----WIASASLGWIAWCTAGLTGFYM 446
Cdd:PRK08676 362 DVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
8-409 |
2.30e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 89.00 E-value: 2.30e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 8 IWIvpvcPFVASMSVGlglfFFPKATKSLRriCAIISIFLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNKDISLQIGF 87
Cdd:PRK07363 6 LWL----PILGAIIIG----FFPGNLPSAR--LRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 88 LIDPLtSTMLVSVTSVGILVMIYSDSYMSHDQGYvrFFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFS 167
Cdd:PRK07363 76 GVDGL-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 168 RPSAAnACQKAFITNRVGDFGLLLGILGTYWITGS--FDIHSLSERfndlidsngvNLFLANMCALL--LFLGPAAKSAQ 243
Cdd:PRK07363 153 EKRGY-ASIKFLIYTAVSGLLVLAAFLGIVWLSGStsFDYDAISTQ----------NLSLNTQLILLtgLLLGFGIKIPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFhfFEALPFTMNIIS----WVGGITALLGATIALAQKDLKKGL 319
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMV 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 320 AYSTMSQPGYMMLAPGIG---SYRAASFHLITHAYSKALLFLGSGSVihsmEPIVGYSPEKSQN--MSFMGGLrkymPIT 394
Cdd:PRK07363 300 AYSSIGHMGYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLNglMNPIRGL----PLT 371
|
410
....*....|....*
gi 124302952 395 GTTFLLGTLSLCGIP 409
Cdd:PRK07363 372 SALLVLAGMASAGIP 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
5.05e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 66.68 E-value: 5.05e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 124302952 75 WFFNKDISLQIGFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
123-422 |
6.11e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 75.07 E-value: 6.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 123 RFFAYLSLFTASMLGLV-LSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGI-LGTYWIT 200
Cdd:PRK12561 87 RLFYFLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLaLALSGDT 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 201 GSFDIHSLSERfndlidsnGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAM-EGPTPISaLIHAATMVAAG----IF 275
Cdd:PRK12561 167 FTFDLAELGAK--------SYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-MILAGVLLKMGgyalIR 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 276 FVARMFHffEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLapGIGSYRA-----ASFHLITHA 350
Cdd:PRK12561 238 FNVQMLP--DAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL--GIAAFTDlgisgAMLQMISHG 313
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124302952 351 YSKALLFLGSGsvihsmepiVGYSPEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSkdEILV 422
Cdd:PRK12561 314 LIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS--ELTV 374
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-415 |
6.68e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 72.17 E-value: 6.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 89 IDPLTSTMLVSVTSVGILVMIYSDSYMSHDQgyVRFFAYL-SLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIG---- 163
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQ--VKANGLLiNLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTGnske 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 164 --FWFSrpsaanacqkafitnrVGDFGLLLGILgTYWIT----GSFDIHSLSERFNDLidSNGVNLFLANMCALLLFLGp 237
Cdd:PRK08042 136 gkLWFA----------------LGRLGTLLLAI-ACWLLwqryGTLDLRLLDMRMQQL--PLGSDIWLLGVIGFGLLAG- 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 238 aaksaQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMNIISWV-GGITALLGATIALAQKDLK 316
Cdd:PRK08042 196 -----IIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQ 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 317 KGLAYSTMSQPGYMMLAPGIG--------------SYRAASFHLITHAYSKALLFLGSGSVIHSmepiVGYspeksQNMS 382
Cdd:PRK08042 271 RLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIE 341
|
330 340 350
....*....|....*....|....*....|....*.
gi 124302952 383 FMGGLRKYMPITGTTFLLGTLSLCGIPP---FACFW 415
Cdd:PRK08042 342 KLGGIGKKMPVISIAMLVGLMAMAALPPlngFAGEW 377
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
41-421 |
5.62e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 68.50 E-value: 5.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 41 AIISIFLLG-IAMFISFSIFWQqirgnpnhqlLWSWFFNKDISLQIGFLIdplTSTMLVSVTSVGILVMIYSDSYMSHDQ 119
Cdd:MTH00199 30 SIGVLLLIGlIVELNSLNLFQS----------DKVLDGTNGLLLTNSWII---ISKIIIIIGSISILLMGSGETILSEGG 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 120 GYvrfFAYLSLFTA-SMLGLVLSPNPVQIYIFWELVGMCSYLLIGFwfSRPSA--ANACQKAFITNRVGDFGLLLGILGT 196
Cdd:MTH00199 97 QS---SPILILIVAlGSLLLVSSINWLSIYLAIELQTLTLFILVAL--KRDSAysTEAGLKYFVLGAVSSGLFLFGCALL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 197 YWITGSFDIHslserfndlidsnGVN-LFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGI 274
Cdd:MTH00199 172 YGLTGETSIQ-------------GINsILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 275 FFVarmfhfFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRA--ASF-HLITHay 351
Cdd:MTH00199 237 FSI------LVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqASLiYMIIY-- 308
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 352 skALLFLGSGSVIHSMEPIVGYSPEKSqnmsfmgGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEIL 421
Cdd:MTH00199 309 --VIMSICSFSIILSLKLTKGLIVEVS-------GLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
130-417 |
6.03e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 68.92 E-value: 6.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 130 LFTASMLGLVLS--PNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDihS 207
Cdd:PRK02504 116 LLTATLGGMFLSgaTELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--Q 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 208 LSERFNDLIDSNGVNLFLAnmcalLLFL--GPAAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAG----IFFVARM 280
Cdd:PRK02504 194 LSAIALALITSPSLGLALA-----LVFViaGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGfalaIRLLVTA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 281 FHFFEA---LPFT-MNIISWVggitalLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGS---YRAASFHLITH---- 349
Cdd:PRK02504 268 FPSFDEqwkLLFTaLAILSMV------LGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmn 341
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124302952 350 --AYSKALLF-LGSGSvihsmEPIVGYSpeksqnmsfmgGLRKYMPITGTTFLLGTLSLCGIPPFACFWSK 417
Cdd:PRK02504 342 lgAFACVILFsLRTGT-----DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
127-417 |
2.02e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 66.95 E-value: 2.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 127 YLSLFTASMLGLVL--SPNPVQIYIFWELVGMCSYLLIGFwfsrpsaanaCQKAFITNRVGDFGLLLG-----IL--GTY 197
Cdd:CHL00049 114 LLFVLTATLGGMFLcgANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGgasssILvyGFS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 198 WITGSFDIH-SLSERFNDLIDSNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIF 275
Cdd:CHL00049 184 WLYGLSGGEiELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAASAL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 276 FVaRMFHFFeaLPFTMNIISWVGGITALL----GATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAY 351
Cdd:CHL00049 264 AT-RIFDIP--FYFSSNEWHLLLEILAILsmilGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYML 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 352 SKALLFLGSGSVIHSMEPIVGyspekSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSK 417
Cdd:CHL00049 341 FYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-417 |
5.95e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 65.05 E-value: 5.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 134 SMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 214 DLIDSNGVNLFLANM---CALLLFLGPAaksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFFVARMFhffeALPF 289
Cdd:MTH00196 85 SGQSFSSVSVPIGYLliiVALLFKLSVA------PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSI----GLNV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 290 TMNIISwvGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLIthayskaLLFLGSGSVIHSMEP 369
Cdd:MTH00196 153 NILLIG--GLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLV-------YLFIYIIMSICVFSI 223
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 124302952 370 IVGYSPEKSQNMSFmGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSK 417
Cdd:MTH00196 224 ILALNVYKNLIIEF-SGLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
81-456 |
1.82e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 60.72 E-value: 1.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 81 ISLQIGFLIDPLtSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVL---SPNPVQIYIFWELVGMC 157
Cdd:MTH00206 49 SFSNLYLSYDPL-SSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILffsSSNLLLFYILFEASLIP 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 158 SYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSerFNDLIDSNGVNLFLAnmcallLFLGP 237
Cdd:MTH00206 128 TLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILY--FSKLTTWNNNLWWLA------CILAF 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 238 AAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFFVA---RMFHFFEALPFTMNIISWVGGITALLG----ATIA 309
Cdd:MTH00206 200 LVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGsimtSSIC 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 310 LAQKDLKKGLAYSTMSQPGymMLAPGIGSYRAASFH-----LITHAY-SKALLFLGSgsvihsmepiVGYSPEKSQNMSF 383
Cdd:MTH00206 273 LRQTDLKSLIAYSSVSHMS--LVTAGILSGSPWGFKgalllMIAHGLvSSALFCLAN----------LLYERSHTRTILG 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 124302952 384 MGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSkdEILVDSWIASASLGWIAWCTAG--LTGFYMFRMYFVTFEG 456
Cdd:MTH00206 341 NRGLQMILPLLSFWWLLFFLANLGLPPFPNLFG--ELLIITSLFSWSNFTLPLLGLGflFTAIYSLYMFVMTQHG 413
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
89-449 |
4.60e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 59.58 E-value: 4.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 89 IDPLTSTMLVSVTSVGILVMIYSDSYMSHdQGYVRFFAYLSLFTASMLGLVLSPNPVQI---YIFWELVGMCSYLLIGFW 165
Cdd:MTH00127 59 TDPLSTPLLVLTCWLLPLMILASQNHTAP-EPINRQRMYITLLTSLQIFLILAFGATEIimfYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 166 FSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLANmCaLLLFLgpaAKSAQFP 245
Cdd:MTH00127 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAG-C-LLAFL---VKMPLYG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 246 LHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTMN---IISWVGGItaLLGATIALAQKDLKKGLAYS 322
Cdd:MTH00127 213 VHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSypfIILALWGI--IMTGSICLRQTDLKSLIAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 323 TMSQPGymMLAPGIGSYRAASFH-----LITHAYSKALLFLGSGSvihsmepivGYSPEKSQNMSFMGGLRKYMPITGTT 397
Cdd:MTH00127 291 SVSHMG--LVAGGILIQTPWGFTgalilMIAHGLTSSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATW 359
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 398 FLLGTLSLCGIPPFACFWSKDEILVD----SWIASASLGWIAWCTAGlTGFYMFRM 449
Cdd:MTH00127 360 WFIASLANLALPPLPNLMGELMIITSlfnwSPWTLALTGLGTLITAG-YSLYMFLM 414
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
148-414 |
5.78e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 59.16 E-value: 5.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 148 YIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNDLIDSNGVNLFLAn 227
Cdd:MTH00226 157 YILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLG- 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 228 mcallLFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFFVARMfhFFEALPFTMN----IISWVGGITA 302
Cdd:MTH00226 236 -----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLL-AGILLKLGGYGLVRL--SWPILPLGAQnlapAVIAMGIVGI 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 303 LLGATIALAQKDLKKGLAYSTMSQPGYM---MLAPGIGSYRAASFHLITHAYSKALLFLgsgsvihsmEPIVGYSPEKSQ 379
Cdd:MTH00226 308 VYGSFATCRQIDVKRLVAYSSVAHMGLVsitLVTHDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTR 378
|
250 260 270
....*....|....*....|....*....|....*
gi 124302952 380 NMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACF 414
Cdd:MTH00226 379 LIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
225-444 |
7.24e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 59.09 E-value: 7.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 225 LANMCALLLFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFFVARMF------------HFFEALPFtm 291
Cdd:PRK12666 208 LLEAGAALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLStllfgpeagasaGFGQDWLL-- 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 292 niisWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYR---AASFHLITHAYSKALLFL---------- 358
Cdd:PRK12666 284 ----PGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrg 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 359 GSGSVIHSMEPIVGYSPEksQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIAS-ASLGWIAWC 437
Cdd:PRK12666 360 AAADRLAVTPELYDLDEE--EEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPgAGAAWWLWA 437
|
....*..
gi 124302952 438 TAGLTGF 444
Cdd:PRK12666 438 LVLLSGL 444
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
124-409 |
1.21e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 58.15 E-value: 1.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 124 FFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSF 203
Cdd:MTH00204 114 FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 204 DIHSLSerfNDLIDSNGVNLFLANmcallLFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFFVARMFH 282
Cdd:MTH00204 194 DYQILL---NIKLPLSIQKWLLVG-----FFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 283 FF-EALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLA---PGIGSYRAASFHLITHAYSKALLFL 358
Cdd:MTH00204 266 LFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGlftHTIEGLVAAVFLMLAHGFVSSALFI 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 124302952 359 GSGSVihsmepivgYSPEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIP 409
Cdd:MTH00204 346 AVTFL---------YERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-424 |
2.28e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 54.48 E-value: 2.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgiffvarmFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKG 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTV--------YILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 319 LAYSTMSQPGYMMLAPGIGSYRA--ASFhliTHAYSKALLFLGSGSVIHSME---PIVGYSPEKSQNMSFMGGLRKYM-- 391
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYESlqASW---TYAVTYLVSALASFTVICTLEefgTRTPTSRQRDGSFGNYNLVRRLVdl 460
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 124302952 392 -------PITGTTFLLGTLSLCGIPPFACFWSKDEILVDS 424
Cdd:MTH00198 461 tilsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGS 500
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-411 |
2.61e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 53.94 E-value: 2.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 148 YIFWELVGMCSYLLIGFW--FSRPSAANAcqkaFITNRVGD--FGLLLGI-LGTYWITGSFDIHSLSERfndlidsnGVN 222
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAATK----FILYTAGSslFILLAALaMAFYGDTPTFDMTALAAK--------DFG 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 223 LFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIF----------FVARMFHFFEALPFTMN 292
Cdd:PRK02546 209 LGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILlkmggyallrMNAGMLPDAHAQFAPLL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 293 IIswVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLapGIGSYRA-----ASFHLITHAYSKALLFLGSGSVihsm 367
Cdd:PRK02546 283 IV--LGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI--GIGSFTDlgtsgAMLQMISHGLIGASLFFLVGAT---- 354
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 124302952 368 epivgYSPEKSQNMSFMGGLRKYMPIT---GTTFLLGTLSLCGIPPF 411
Cdd:PRK02546 355 -----YDRTHTLMLDEMGGVGQKMRKMfamWTACSLASLALPGMSGF 396
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
71-458 |
4.51e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 53.21 E-value: 4.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 71 LLWSWFFNKDISLQIGFL-IDPLTSTMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLVLSPNPVQIYI 149
Cdd:MTH00014 38 LLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYI 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 150 FWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSERFNdlidsngvNLFLANMC 229
Cdd:MTH00014 118 FFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPP--------SIYLMNLW 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 230 ALLLFLGPAAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFFVARMFHFFEAL-----PFTMNIISWVGGITAL 303
Cdd:MTH00014 190 WLITILAFMVKMPLYTVHLWLPKAhVEAPVAGS-MILAGILLKLGGYGLLRMSSLFMHInkslsAPFSSISLVGAVITSL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 304 lgatIALAQKDLKKGLAYSTMSQPGYM---MLAPGIGSYRAASFHLITHAYSKALLFlgsgsVIHSMEpivgYSPEKSQN 380
Cdd:MTH00014 269 ----ICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQGALAMMIAHGLCSSALF-----ALANMT----YETTHTRS 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 124302952 381 MSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLTGFYMFRMYFVTFEGDF 458
Cdd:MTH00014 336 LFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSP 413
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
169-414 |
8.38e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 51.75 E-value: 8.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 169 PSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSErfndlidsngvnlflaNMCALLLFLGPAAKSAQFPLHV 248
Cdd:MTH00112 50 PRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQLTN----------------PTSCTLLTLALAMKLGLAPFHF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 249 WLPDAMEGPTPISALIHAATMVAAGIffvARMFHFFEALPFTmnIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPG 328
Cdd:MTH00112 114 WLPEVLQGSTTTTALILSTWQKLAPL---TLLLMTSNSLNPT--LLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLG 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 329 YMM----LAPGIgsyraASFHLITHAYSKALLFLgsgsVIHSMepivgyspeKSQNMSFMGGLRKYMPITGTTFLLGTLS 404
Cdd:MTH00112 189 WMIaiitYSPKL-----TLLTFYIYILMTTPMFL----TLNTT---------STKTLKDMMTSWTKSPTLNTTLMLTLLS 250
|
250
....*....|
gi 124302952 405 LCGIPPFACF 414
Cdd:MTH00112 251 LAGLPPLTGF 260
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
152-435 |
1.25e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.12 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 152 ELVGMCSYLLIGFWFSrPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFdihslserfndlidsnGVNLFLANMCAL 231
Cdd:MTH00200 34 EINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW----------------GISEMLGPLSET 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 232 LLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMfhffeALPFTMNIISWVGGITALLGATIALA 311
Cdd:MTH00200 97 LILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQL-----APALNSNILLLLGLLSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 312 QKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKAL-LFLGSGSVIHSmepivgyspeKSQNMSFMGGlrky 390
Cdd:MTH00200 172 QTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVfLLLNLLNSTKI----------NSLSSSKTKN---- 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 124302952 391 mPITGTTFLLGTLSLCGIPPFACFWSKdeILVDSWIASASLGWIA 435
Cdd:MTH00200 238 -PILSMLLGLTLLSLGGLPPLTGFFPK--WLILQELSKQGLFIYA 279
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
101-410 |
1.26e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 51.71 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 101 TSVGILVMIYSDSYmSHDQGYVRffaylSLFTASMLGLVL---SPNPVQIYIFWELVGMCSYLLIGFWFSRPSAAnacqk 177
Cdd:PRK06459 54 TIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAIvltSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPA----- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 178 aFITNRVGDFGLLLGILGTYW---ITGSFDIHSLSerfndlidsngvnlflANMCALLLFLGPAAKSAQFPLHV--WLPD 252
Cdd:PRK06459 123 -FVFMAFGELSTVLILAGFAWafiISGTTNFSYLP----------------SPVPLILASFGFIIKMGMMPFLVseWLPI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 253 AMEGPTPISALIHAATMVAAGIFFVARMFHFFEALPFTM--NIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYM 330
Cdd:PRK06459 186 AHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYfgLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 331 MLAPG--IGSYRAAS-----------FHLITHAYSKALLFLGSGSVIHSMepiVGYSPEKSQNMSFMGGlrkympitgtt 397
Cdd:PRK06459 266 LVALGlyMVTKQLITsiehfslitviLYSFAHSVAKTGLFLSSGLQEKQS---ITYSKKIRNRWIELGL----------- 331
|
330
....*....|...
gi 124302952 398 fLLGTLSLCGIPP 410
Cdd:PRK06459 332 -TLLASSLSGLLP 343
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
145-409 |
2.39e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 50.82 E-value: 2.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 145 VQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITGSFDIHSLSerfNDLIDSNgvnlf 224
Cdd:MTH00217 132 VGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC---CLKIEKE----- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 225 LANMCALLLFLGPAAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFFVARMFHFF-EALPFTMNIISWVGGITA 302
Cdd:MTH00217 204 LQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 303 LLGATIALAQKDLKKGLAYSTMSQPGYMMLapGIGSyraasfHLITHAYSKALLFLGSGSVIHSMEPIVGYSPEKSQN-- 380
Cdd:MTH00217 284 IYGSLTTCRQVDLKRIIAYSSVAHMGLVTL--GIFS------HTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTrl 355
|
250 260
....*....|....*....|....*....
gi 124302952 381 MSFMGGLRKYMPITGTTFLLGTLSLCGIP 409
Cdd:MTH00217 356 IKYYRGMVITMPLFGILMLLLVLANASIP 384
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
123-412 |
2.92e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 50.71 E-value: 2.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 123 RFFAYLSLFTAS-MLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANAcQKAFITNRVGDFGLLLGILGT--YWI 199
Cdd:CHL00011 112 RLFYFLMLAMYSgQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSA-TKFILYTAGGSIFLLIGVLGMglYGS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 200 TG-SFDIHSLSERfndlidSNGVNLflanmcALLLFLG----PAAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAG 273
Cdd:CHL00011 191 NEpTLNFETLANQ------SYPVAL------EILFYIGfliaYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAG 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 274 IFFvaRMFHF------FEALPFTMNIIS-W---VGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLapGIGSY---- 339
Cdd:CHL00011 252 ILL--KMGAYglirinMELLPHAHSIFSpWlviVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIII--GIGSItdtg 327
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 124302952 340 -RAASFHLITHAYSKALLFLGSGSvihsmepivGYSPEKSQNMSFMGGLRKYMP---ITGTTFLLGTLSLCGIPPFA 412
Cdd:CHL00011 328 lNGAILQIISHGFIGAALFFLAGT---------SYDRIRLVYLDEMGGIAIPMPkifTMFSSFSMASLALPGMSGFV 395
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
130-421 |
5.62e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 46.65 E-value: 5.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 130 LFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFwfsrpSAANACQKAFITNRVGDFglllgILGTYWITGSFdIHSLS 209
Cdd:PRK12664 71 LYYISSIAAISSSSLTLVVIGFEFMALSALMIIAA-----GCPGGNIGAFIHYACVHF-----FSGVLLLVGAS-GQAQN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 210 ERFNDLidsngvnlflanmCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIffvarMFHFFEAL 287
Cdd:PRK12664 140 GQYTGY-------------CKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALV-----LLLFFSGE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 288 PftmnIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAAS-----FHLITHAYSKALLFLGSGS 362
Cdd:PRK12664 202 E----ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAigiliLQIVLSVVYQTLLFMVADS 277
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 124302952 363 VIHSMEPIvgyspeksqNMSFMGGLRKyMPITGTTFLLGTLSLCGIPPFACFWSKDEIL 421
Cdd:PRK12664 278 VINRTRKF---------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLIT 326
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
224-454 |
7.89e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.54 E-value: 7.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 224 FLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIffvarMFHFFEALPFTMNIISWVGGITAL 303
Cdd:MTH00011 85 LLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPL-----SILFFFTSHNILPMMTSMAAMSAL 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 304 LGATIALAQKDLKKGLAYSTMSQPGYMMLApGIGSYRAASFHLITHAYSKALLFLgsgsvihsmepIVGYSPEKSQNmsF 383
Cdd:MTH00011 160 AGGLGGMNQTQLRPLLAYSSIGHMGWMTMI-SVFSPSMAILYFMTYIIITTPLML-----------LFAYLNAFSTK--F 225
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 124302952 384 MGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSKdEILVDSWIASASLGWIAWCTAG--LTGFYMFRMYFVTF 454
Cdd:MTH00011 226 NSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPK-LMAIETLTSNSMILILLVLIVGslMNLFYYLNLIFNFM 297
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
87-422 |
1.17e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 45.29 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 87 FLIDPLTSTMLVSVTSVGILVMIYSDSYMS-----HDQGYVRFFAYLSL-----FTASMLGLvlspnpvqIYIFWELVGM 156
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYISMLIILQLtlilaFSATELIL--------FYIFFEATLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 157 CSYLLIGFWFSRPSAANACQK-AFITnRVGDFGLLLGILGTYWITGSFDIhSLSERFNDLIDSNGVNLFLANMCaLLLFL 235
Cdd:MTH00068 128 PTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAFM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 236 gpaAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMV---AAGIFFVARMFH-FFEALPFTMNIISWVGgitALLGATIAL 310
Cdd:MTH00068 205 ---VKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLklgGYGILRISILLTpLSKELSYPFIILALWG---VLMTSLICL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 311 AQKDLKKGLAYSTMSQPGYMMLAPGIG---SYRAASFHLITHAY-SKALLFLGSGSvihsmepivgYSPEKSQNMSFMGG 386
Cdd:MTH00068 278 RQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRG 347
|
330 340 350
....*....|....*....|....*....|....*.
gi 124302952 387 LRKYMPITGTTFLLGTLSLCGIPPFACFWSKDEILV 422
Cdd:MTH00068 348 AQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMV 383
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
229-477 |
1.52e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.49 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 229 CALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVArMFHFfeaLPFTMNIISWVGGITALLGATI 308
Cdd:MTH00144 86 SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLS-NFLD---LYWLAYLLCVISVLSALVGSIG 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 309 ALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLIthaYSKALLFLgsgsvihsmepIVGYSPEKSQNMSFMGGLr 388
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLI---YIVSSGFL-----------FFSLWSGDSGSMKDLGSL- 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 389 KYMPITGTTFLLGTLSLCGIPPFACFWSKDEILVDSWIASASLGWIAWCTAGLT--GFYMFRMYFVTfegdFRGNLSYKD 466
Cdd:MTH00144 227 KPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLIslFFYLSVFFSSF----LSSSKSKKS 302
|
250
....*....|.
gi 124302952 467 TDKSVSYKSIW 477
Cdd:MTH00144 303 NSSKVLNSSII 313
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
124-332 |
4.79e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 43.23 E-value: 4.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 124 FFAYLSLFTASMLGLVLSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQkAFITNRVGDFGLLLGILGTYWITGSF 203
Cdd:PRK06591 117 FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFD-YLIMGSIGATLILIAIGFLLSITGSL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 204 DIHSLSERFNDLIDSNGVNLflanmcALLLFL-GPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF----FVA 278
Cdd:PRK06591 196 NMTDIAAYLQEHTNSRIITI------AIGFFLiGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYiiykFTY 269
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 124302952 279 RMFHFFEALPFTMNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMML 332
Cdd:PRK06591 270 IIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
42-338 |
6.02e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 43.04 E-value: 6.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 42 IISIFLLGIAMFISFSIFWQQIRGNPNHQLLWSWFFNKDISLQIGFLIDPLT----STMLVSVTSVGILVMIYSDSYMSh 117
Cdd:MTH00205 3 IFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSfdslSLPLIMLSFWISLLMVLASYKVF- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 118 dqgYVRFFAYLSLFTASMLGLVL-----SPNPVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLG 192
Cdd:MTH00205 82 ---KSNKNSKLFTVSVIMLLLILilsfsVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 193 ILGTYWITGSFDIHslserFNDLIDSNGVNLFLANMCALLLFLgpaAKSAQFPLHVWLPDA-MEGPTpisalihAATMVA 271
Cdd:MTH00205 159 LFFLNSLNFSLSMF-----FNFPLNFSDFYLFLYWIFLMLAFL---VKLPMYFVHLWLPKAhVEAPV-------SGSMIL 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 272 AGI-----------FFVARMFHFFEALPFTMNIISWVGGITALlgatIALAQKDLKKGLAYS-------------TMSQP 327
Cdd:MTH00205 224 AGVllklggyglirITSMLYKLNSNFSELFFSISLWGGVMTGM----ICLRQVDLKSLIAYSsvghmglmvvgvfSNTSW 299
|
330
....*....|....*.
gi 124302952 328 GY-----MMLAPGIGS 338
Cdd:MTH00205 300 GMngaiiMMVAHGLCS 315
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
53-410 |
1.03e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 42.19 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 53 FISFSIFWQQIRGNPNHQLLwswffnkdislqigFLIDPLTSTMLVSVTSVGILVMIYSDSYMSHDQgYVRFFAYLSL-- 130
Cdd:MTH00110 36 LISLLLLNQPNDNSLNFSLL--------------FFSDSLSTPLLILTTWLLPLMLMASQHHLSKEP-LTRKKLYITMli 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 131 ---------FTASMLglvlspnpVQIYIFWELVGMCSYLLIGFWFSRPSAANACQKAFITNRVGDFGLLLGILGTYWITG 201
Cdd:MTH00110 101 llqlflimtFTATEL--------IMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLG 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 202 SFDIHSLSERFNDLIDSNGVN-LFLANMCALLLflgpaaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFF--- 276
Cdd:MTH00110 173 SLNFLLLQLWAQPLPNSWSNNlLWLACMMAFMV------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklg 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 277 ---VARMFHFFE------ALPFTMniISWVGGItalLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIG---SYRAASF 344
Cdd:MTH00110 240 gygMMRITIILNpltefmAYPFLM--LSLWGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATA 314
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124302952 345 HLITHAYSKALLFLGSGSvihsmepivGYSPEKSQNMSFMGGLRKYMPITGTTFLLGTLSLCGIPP 410
Cdd:MTH00110 315 LMIAHGLTSSMLFCLANS---------NYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
94-456 |
1.09e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 42.13 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 94 STMLVSVTSVGILVMIYSDSYMSHDQGYVRFFAYLSLFTASMLGLV-LSPNPVQIYIFWELVGMCSYLLIGFWFSRPSAA 172
Cdd:MTH00150 26 SSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLLILGWGYQPERL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 173 NACQKAFITNRVGDFGLLLGILGTYWITGSFDIhslserfnDLIDSNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPD 252
Cdd:MTH00150 106 QAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM--------LLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 253 A-MEGPTpisalihAATMVAAGI------FFVARMFHFFEALPFTMNII----SWVGGitaLLGATIALAQKDLKKGLAY 321
Cdd:MTH00150 178 AhVEAPV-------AGSMILAGIllklggYGILRMMMVFSLSSSSFSIFlislSLWGG---VLTSLICLRQSDVKSLIAY 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 322 STMsqpGYM--MLApGIGSYR-----AASFHLITHAYSKALLFLgsgsvihsmepIVGYSPEKSQ--NMSFMGGLRKYMP 392
Cdd:MTH00150 248 SSV---GHMslVLA-GVLSNTswgwvGALIMMVSHGFCSSGLFC-----------LANYTYEKVHsrSLFLSKGMLMLYP 312
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 124302952 393 ITGTTFLLGTLSLCGIPPFACFWSkdEILVDSWIASASLGWIAWCtaGLTGF----YMFRMYFVTFEG 456
Cdd:MTH00150 313 SLSLWWFLFCIINMAAPPSLNLLS--EIMIFPSLISYSPWFFVPL--GLMVFlsglYSLYLYTSIQHG 376
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
184-338 |
2.33e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 41.11 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 184 VGDFGLLLGILGTYWITgsfdiHSLSERFNDLIDSNGVNLFLANMCALLLFLGPAAKSAQFPLHVWLPDA-MEGPTPISa 262
Cdd:MTH00044 156 FGSLPLLISLIAIYSSS-----SSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS- 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 263 LIHAATMVAAGIFFVARMFHFFeALPFTMNIIS-------WVGGITALlgatIALAQKDLKKGLAYSTmsqPGYM-MLAP 334
Cdd:MTH00044 230 MILAAILLKLGGYGLIRLINLF-SLPSANNISFilivfccWGALITSI----ICLRQTDLKALIAYSS---VGHMsLVAA 301
|
....
gi 124302952 335 GIGS 338
Cdd:MTH00044 302 GIFS 305
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
189-417 |
4.44e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.91 E-value: 4.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 189 LLLGILGTYWITGSFDIhslserfndlidsngvNLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAAT 268
Cdd:MTH00041 70 LLNGALIQAWLSGSWSI----------------NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATW 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 269 MVAAGIFFvarMFHFFEALPFtmNIISWVGGITALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLIT 348
Cdd:MTH00041 134 QKIAPLIL---LISISNLLNS--NILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIY 208
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124302952 349 HAYSKALLFLGSgsvIHSMEpivgyspeksqNMSFMGGLRKYMPITGTTFLLGTLSLCGIPPFACFWSK 417
Cdd:MTH00041 209 IIINTSIFLIGN---NFSLS-----------TLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNK 263
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-417 |
7.71e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 39.27 E-value: 7.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 222 NLFLANMCALLLFLGPAAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFFVARMFHffealpfTMNIISWVGGIT 301
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS-------SFMGLLICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124302952 302 ALLGATIALAQKDLKKGLAYSTMSQPGYMMLAPGIGSYRAASFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPEKSQNM 381
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190
....*....|....*....|....*....|....*.
gi 124302952 382 SFmgglrkympitgttFLLGTLSLCGIPPFACFWSK 417
Cdd:MTH00197 227 VF--------------LGLSFLSLGGLPPLSGFFLK 248
|
|
| |
