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DUF490 domain-containing protein [Capnocytophaga stomatis]
Protein Classification
translocation/assembly module TamB domain-containing protein ( domain architecture ID 10516166 )
TamB family protein similar to translocation/assembly module TamB that is a part of the translocation and assembly module (TAM) autotransporter assembly complex, which functions in the translocation of autotransporters across the outer membrane
List of domain hits
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
651-1442
4.14e-50
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 191.79
E-value: 4.14e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 651 KVKI G K N TI - L K G KIV A DEGSFKMQ L KS PD IN aydyqidnvdlridnkn P L YNAFFEVE kvdl G MYTISDFNLINATIKD 729
Cdd:COG2911 92 DLRS G G N RL t L S G NLS A ASLDGDLD L DA PD LA ----------------- D L AALLPGLA ---- G SLSGDGLDSLSLDADG 150
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 730 TL F --- FRTEF KG GDTGKD v YE L NFYHTLNEKQESI iglkk S L FNFKESA W FINRDNS dkqnkii INRTADTIKIDNFRM 806
Cdd:COG2911 151 TL A qhr LDLDA KG EPASLS - LA L SGGLDRDDGGTLS ----- R L DFLNTGR W GLAAPAT ------- LSYDDGRVTLGPLCL 217
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 807 A H r NQHIN LSG iv T KNDYKNIHIVAN N VS L EKIT P EM - KG L D L R GT MH G HLS L VQKGKLFYPSSD L FIRY - FR LN G ---- 880
Cdd:COG2911 218 A G - GGSLC LSG -- T LGGTLDLQLRLK N LP L ALLN P FL p DD L G L S GT LN G DAD L SGGLANPQGDAS L SLSG d LT LN D glgg 294
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 881 -- YDY GDL EASIFGNDD ls SFDVSAHFVN G KTRGFQMG G KIN L DGK -- EGTL LD LKAKFHDFN LA PF NP FAE G I L FD L R G 956
Cdd:COG2911 295 lp LGL GDL TLNARLANG -- RLTLDLTLDG G GLGTLSLS G SVP L ADG lp PSAP LD GNLRLDNLD LA LL NP LLP G V L ER L S G 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 957 W L S G GIDIK G KIEN P KMD G E L SIHK G GMGITY L NL na DFQ D - N AKIKVNNQTFE L EN wt LT DTAFKTQALFD G SIRHNK L 1035
Cdd:COG2911 373 Q L N G DLRLS G TLAA P QLN G Q L TLDD G RLKLPA L GV -- RLT D i N LRLRFDGDRLT L DG -- LT ADSGGGTLTLS G TVDLDG L 448
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1036 S d W FF DLTLK sq G KRFL VLN TK ytddalf YG T GFIQ G EA T VK G AI D ELVI S V N AKTEEGT q FKI P LPDSEG V GDDSFITF 1115
Cdd:COG2911 449 S - W PA DLTLK -- G DNLR VLN PP ------- DY T ATVS G DL T LT G TP D GPTL S G N VTVPRAR - ITL P ELPPSA V SLSDDVVV 517
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1116 IEKGNKNIKV E RT lesv K GL E L RFNMD V MPNAE V EI imdkk T G SN L VG R GE G T L LIEINTN G KFNMW G DFITYS G Y YN F k 1195
Cdd:COG2911 518 VNRPPEPVPE E EA ---- A GL P L DLDLN V NLGDD V RV ----- R G FG L DA R LG G D L RLTGTPG G APRLT G EINLVR G R YN A - 587
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1196 feni IDK R F T VLP g GSI SWS G D PL KAS L r D LK A AY T LN anpsvllessqynrki PTQVIIKLE G ELMQ P E tlfd IT F p D S 1275
Cdd:COG2911 588 ---- YGQ R L T IER - GSI TFN G P PL DPY L - D IE A VR T VD ---------------- DVTAGVRVT G TASN P K ---- IT L - F S 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1276 N P S L vselnyrma DE D rkrl QAF SLL AQ G SFMSERNTDN rlv A HN L FET AA G L FNQLLSDEDNK L N -- LG VS y EAG t ID S 1353
Cdd:COG2911 641 D P A L --------- PQ D ---- EIL SLL LF G RGLDSLSGGD --- A AQ L ASA AA S L LGGGGGGLLGQ L G sa LG LD - DLS - ID T 702
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1354 ASEINNS drl GF T FSTQI T EWAS V NAK VG I p VG G VTR tavagn AEVVL RLT ETGN L T A kfffrenewqqylld RI G YTQ G 1433
Cdd:COG2911 703 GGSGDGT --- SV T VGKYL T DRLY V SYG VG L - FD G LSE ------ VTLRY RLT RRLS L E A --------------- QS G TGN G 757
....*....
gi 1242567918 1434 AGIT Y SVD F 1442
Cdd:COG2911 758 VDLL Y RFE F 766
AsmA super family
cl34531 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
5-551
2.71e-11
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
COG2982 :Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 67.76
E-value: 2.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 5 KR FG K I L FRFIW I T L LI L GVIA V L L A L PVTQTFIAKKVVNWLNKDYDVDIQ I E --------- KVHLKI n G N V AVKQL li N 75
Cdd:COG2982 1 KR LM K R L LIILA I L L VL L VAAL V A L P L LFDWNRLRPLIERQVSEATGREVT I D gdlslslfp WPGVTL - G D V TLSNP -- D 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 76 D F KKDT L IA A KE L QTS i L NFRQ L TE G N L YFGKVEA DG LIF N MKTHK g D TIS N L D VFVSKFDSG - KPSSGGFIMKAKSVNL 154
Cdd:COG2982 78 G F GGPP L AS A ER L ELD - L ALLP L LS G E L EVDEITL DG PVI N LERDA - D GRA N W D FLLAAAAAA a DAEASAWSLDIGRLEI 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 155 T NSNCYIS D ENKE dp SIIKVEN LN IN L KDF kvl DSEVF F DV q KANFVYDK nlyv KN L ETNFA f TDS L MSVDNLVFET D KS 234
Cdd:COG2982 156 T DGRLVYD D AASG -- ADLTLDD LN LT L SGP --- SLDGP F RL - SGSGRLNG ---- QP L TLDGK - IGG L LALGPYPLKL D LR 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 235 S LEGYVK L fpte DG FD D FEN rvl F D AKIS kas L ETTD L NTFYNAF GV ----------------- G KT L NIKN L S iq G V L N 297
Cdd:COG2982 225 S GDLRLS L ---- DG TV D LAG --- L D GQLA --- L SGPS L RDLLALL GV tlpepgpfslsgrltad G DR L RLED L K -- G T L G 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 298 D LKVS e G EIAYQNT --- IIE G NFNFKN L lddqkkiivkgkdvylesiyn DL AT L M P vqlgqnipsevqrlemfsvhgdll 374
Cdd:COG2982 293 D SDLT - G DLSVTGG drp ALT G DLASDR L --------------------- DL DD L L P ------------------------ 326
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 375 ytts A LE A NLELRSNKGNAS L DGMLDN L ENINDMIYKGTVATQG L DF G A L ladr SF G K L T AH M T VKGSGF DL AS L KMQA Y 454
Cdd:COG2982 327 ---- A AP A AAAAGAPAAARG L PDAPLD L SALRALDADVRLSADS L KL G G L ---- PL G D L A AH L T LDDGRL DL DP L SAGL Y 398
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 455 G kaes FHYN G ydyk NISV D GEFKNKVFNGRI S ANDIN L KMNFSG LA D F SKNNSKFDFQANIDVADLHALKFME S dsisk L 534
Cdd:COG2982 399 G ---- GTLS G ---- SLTL D ARGDPPRVALKL S LSGVD L GPLLPD LA G F DRLSGTLNGDLDLSGTGNSVAALLA S ----- L 465
570 580
....*....|....*....|..
gi 1242567918 535 K GS IVFD ----- I Q G N NL DDIV 551
Cdd:COG2982 466 N GS ASLS lgdga I S G L NL EQLL 487
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
651-1442
4.14e-50
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 191.79
E-value: 4.14e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 651 KVKI G K N TI - L K G KIV A DEGSFKMQ L KS PD IN aydyqidnvdlridnkn P L YNAFFEVE kvdl G MYTISDFNLINATIKD 729
Cdd:COG2911 92 DLRS G G N RL t L S G NLS A ASLDGDLD L DA PD LA ----------------- D L AALLPGLA ---- G SLSGDGLDSLSLDADG 150
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 730 TL F --- FRTEF KG GDTGKD v YE L NFYHTLNEKQESI iglkk S L FNFKESA W FINRDNS dkqnkii INRTADTIKIDNFRM 806
Cdd:COG2911 151 TL A qhr LDLDA KG EPASLS - LA L SGGLDRDDGGTLS ----- R L DFLNTGR W GLAAPAT ------- LSYDDGRVTLGPLCL 217
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 807 A H r NQHIN LSG iv T KNDYKNIHIVAN N VS L EKIT P EM - KG L D L R GT MH G HLS L VQKGKLFYPSSD L FIRY - FR LN G ---- 880
Cdd:COG2911 218 A G - GGSLC LSG -- T LGGTLDLQLRLK N LP L ALLN P FL p DD L G L S GT LN G DAD L SGGLANPQGDAS L SLSG d LT LN D glgg 294
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 881 -- YDY GDL EASIFGNDD ls SFDVSAHFVN G KTRGFQMG G KIN L DGK -- EGTL LD LKAKFHDFN LA PF NP FAE G I L FD L R G 956
Cdd:COG2911 295 lp LGL GDL TLNARLANG -- RLTLDLTLDG G GLGTLSLS G SVP L ADG lp PSAP LD GNLRLDNLD LA LL NP LLP G V L ER L S G 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 957 W L S G GIDIK G KIEN P KMD G E L SIHK G GMGITY L NL na DFQ D - N AKIKVNNQTFE L EN wt LT DTAFKTQALFD G SIRHNK L 1035
Cdd:COG2911 373 Q L N G DLRLS G TLAA P QLN G Q L TLDD G RLKLPA L GV -- RLT D i N LRLRFDGDRLT L DG -- LT ADSGGGTLTLS G TVDLDG L 448
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1036 S d W FF DLTLK sq G KRFL VLN TK ytddalf YG T GFIQ G EA T VK G AI D ELVI S V N AKTEEGT q FKI P LPDSEG V GDDSFITF 1115
Cdd:COG2911 449 S - W PA DLTLK -- G DNLR VLN PP ------- DY T ATVS G DL T LT G TP D GPTL S G N VTVPRAR - ITL P ELPPSA V SLSDDVVV 517
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1116 IEKGNKNIKV E RT lesv K GL E L RFNMD V MPNAE V EI imdkk T G SN L VG R GE G T L LIEINTN G KFNMW G DFITYS G Y YN F k 1195
Cdd:COG2911 518 VNRPPEPVPE E EA ---- A GL P L DLDLN V NLGDD V RV ----- R G FG L DA R LG G D L RLTGTPG G APRLT G EINLVR G R YN A - 587
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1196 feni IDK R F T VLP g GSI SWS G D PL KAS L r D LK A AY T LN anpsvllessqynrki PTQVIIKLE G ELMQ P E tlfd IT F p D S 1275
Cdd:COG2911 588 ---- YGQ R L T IER - GSI TFN G P PL DPY L - D IE A VR T VD ---------------- DVTAGVRVT G TASN P K ---- IT L - F S 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1276 N P S L vselnyrma DE D rkrl QAF SLL AQ G SFMSERNTDN rlv A HN L FET AA G L FNQLLSDEDNK L N -- LG VS y EAG t ID S 1353
Cdd:COG2911 641 D P A L --------- PQ D ---- EIL SLL LF G RGLDSLSGGD --- A AQ L ASA AA S L LGGGGGGLLGQ L G sa LG LD - DLS - ID T 702
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1354 ASEINNS drl GF T FSTQI T EWAS V NAK VG I p VG G VTR tavagn AEVVL RLT ETGN L T A kfffrenewqqylld RI G YTQ G 1433
Cdd:COG2911 703 GGSGDGT --- SV T VGKYL T DRLY V SYG VG L - FD G LSE ------ VTLRY RLT RRLS L E A --------------- QS G TGN G 757
....*....
gi 1242567918 1434 AGIT Y SVD F 1442
Cdd:COG2911 758 VDLL Y RFE F 766
TamB
pfam04357 TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane ...
1014-1442
8.83e-48
TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.
Pssm-ID: 461272 [Multi-domain]
Cd Length: 383
Bit Score: 176.05
E-value: 8.83e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1014 T LT DT A FKTQALFD G S I RHNK L S D WFF DLTL ks QGKRF LV L NTK YTD dalfygt G FIQ G EA T V KG AIDEL V I S VNAKTEE 1093
Cdd:pfam04357 2 G LT AR A NGGTLTLN G T I SLES L K D FEL DLTL -- SLNNL LV Y NTK DLR ------- G TVS G DL T L KG TLNQP V L S GELTVPS 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1094 G T QFKIPLP DSE GVGD - DSFIT F IEKGNKNIKVERTLESVK G LELRFNMDVMPNAEVEIIMDKKT --- G SN L VGRGE G T L 1169
Cdd:pfam04357 73 A T ILLYEAG DSE AASS r SGDVV F VDPESRTEEEPAKTAEDS G APTGLDLPLLLFLDLKLSLGPDV rvd G PG L RAELT G D L 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1170 LIEINT NG KFNMW G DFITYS G Y YNF kfeni ID K R F T v L P GG SISW SGDP LKASLR D LK A A YT L NA npsvll E SSQY NRKI 1249
Cdd:pfam04357 153 QVNGTA NG RPSLF G SIRVTR G T YNF ----- LG K T F D - L D GG EVTF SGDP PIDPTL D IT A I YT V NA ------ D SSQY TGRD 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1250 P TQ V IIKLE G E L MQ P E tlfd I T F p D S N P S L vselnyrmadedr KRLQAF SLL AQ G SFM S ERNT - DNRLV A HN L FET A A - G 1327
Cdd:pfam04357 221 P VK V GLNVT G T L SS P T ---- V T L - S S E P P L ------------- PETEIL SLL LL G RSL S DLSS g QLGAA A AS L LGS A G s G 282
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1328 L FNQL L SDEDNK L N L - GV S YEAG T IDSASEINNSDR L GF T FSTQI T EWAS V NAKV G IPV GG VTRTA V agna EVVL RLT ET 1406
Cdd:pfam04357 283 L LSGQ L NKLRSA L G L d NL S LGSA T SSTGGDVTSGGG L VV T VGKYL T DRLY V SVGT G VGL GG SPTGD V ---- SIEY RLT PN 358
410 420 430
....*....|....*....|....*....|....*.
gi 1242567918 1407 GN L T AK F F FRENEWQQ ylldrigytqg AGIT Y SV DF 1442
Cdd:pfam04357 359 LS L R AK T F NGQTDESG ----------- VDLS Y KF DF 383
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
5-551
2.71e-11
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 67.76
E-value: 2.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 5 KR FG K I L FRFIW I T L LI L GVIA V L L A L PVTQTFIAKKVVNWLNKDYDVDIQ I E --------- KVHLKI n G N V AVKQL li N 75
Cdd:COG2982 1 KR LM K R L LIILA I L L VL L VAAL V A L P L LFDWNRLRPLIERQVSEATGREVT I D gdlslslfp WPGVTL - G D V TLSNP -- D 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 76 D F KKDT L IA A KE L QTS i L NFRQ L TE G N L YFGKVEA DG LIF N MKTHK g D TIS N L D VFVSKFDSG - KPSSGGFIMKAKSVNL 154
Cdd:COG2982 78 G F GGPP L AS A ER L ELD - L ALLP L LS G E L EVDEITL DG PVI N LERDA - D GRA N W D FLLAAAAAA a DAEASAWSLDIGRLEI 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 155 T NSNCYIS D ENKE dp SIIKVEN LN IN L KDF kvl DSEVF F DV q KANFVYDK nlyv KN L ETNFA f TDS L MSVDNLVFET D KS 234
Cdd:COG2982 156 T DGRLVYD D AASG -- ADLTLDD LN LT L SGP --- SLDGP F RL - SGSGRLNG ---- QP L TLDGK - IGG L LALGPYPLKL D LR 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 235 S LEGYVK L fpte DG FD D FEN rvl F D AKIS kas L ETTD L NTFYNAF GV ----------------- G KT L NIKN L S iq G V L N 297
Cdd:COG2982 225 S GDLRLS L ---- DG TV D LAG --- L D GQLA --- L SGPS L RDLLALL GV tlpepgpfslsgrltad G DR L RLED L K -- G T L G 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 298 D LKVS e G EIAYQNT --- IIE G NFNFKN L lddqkkiivkgkdvylesiyn DL AT L M P vqlgqnipsevqrlemfsvhgdll 374
Cdd:COG2982 293 D SDLT - G DLSVTGG drp ALT G DLASDR L --------------------- DL DD L L P ------------------------ 326
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 375 ytts A LE A NLELRSNKGNAS L DGMLDN L ENINDMIYKGTVATQG L DF G A L ladr SF G K L T AH M T VKGSGF DL AS L KMQA Y 454
Cdd:COG2982 327 ---- A AP A AAAAGAPAAARG L PDAPLD L SALRALDADVRLSADS L KL G G L ---- PL G D L A AH L T LDDGRL DL DP L SAGL Y 398
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 455 G kaes FHYN G ydyk NISV D GEFKNKVFNGRI S ANDIN L KMNFSG LA D F SKNNSKFDFQANIDVADLHALKFME S dsisk L 534
Cdd:COG2982 399 G ---- GTLS G ---- SLTL D ARGDPPRVALKL S LSGVD L GPLLPD LA G F DRLSGTLNGDLDLSGTGNSVAALLA S ----- L 465
570 580
....*....|....*....|..
gi 1242567918 535 K GS IVFD ----- I Q G N NL DDIV 551
Cdd:COG2982 466 N GS ASLS lgdga I S G L NL EQLL 487
Name
Accession
Description
Interval
E-value
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
651-1442
4.14e-50
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 191.79
E-value: 4.14e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 651 KVKI G K N TI - L K G KIV A DEGSFKMQ L KS PD IN aydyqidnvdlridnkn P L YNAFFEVE kvdl G MYTISDFNLINATIKD 729
Cdd:COG2911 92 DLRS G G N RL t L S G NLS A ASLDGDLD L DA PD LA ----------------- D L AALLPGLA ---- G SLSGDGLDSLSLDADG 150
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 730 TL F --- FRTEF KG GDTGKD v YE L NFYHTLNEKQESI iglkk S L FNFKESA W FINRDNS dkqnkii INRTADTIKIDNFRM 806
Cdd:COG2911 151 TL A qhr LDLDA KG EPASLS - LA L SGGLDRDDGGTLS ----- R L DFLNTGR W GLAAPAT ------- LSYDDGRVTLGPLCL 217
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 807 A H r NQHIN LSG iv T KNDYKNIHIVAN N VS L EKIT P EM - KG L D L R GT MH G HLS L VQKGKLFYPSSD L FIRY - FR LN G ---- 880
Cdd:COG2911 218 A G - GGSLC LSG -- T LGGTLDLQLRLK N LP L ALLN P FL p DD L G L S GT LN G DAD L SGGLANPQGDAS L SLSG d LT LN D glgg 294
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 881 -- YDY GDL EASIFGNDD ls SFDVSAHFVN G KTRGFQMG G KIN L DGK -- EGTL LD LKAKFHDFN LA PF NP FAE G I L FD L R G 956
Cdd:COG2911 295 lp LGL GDL TLNARLANG -- RLTLDLTLDG G GLGTLSLS G SVP L ADG lp PSAP LD GNLRLDNLD LA LL NP LLP G V L ER L S G 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 957 W L S G GIDIK G KIEN P KMD G E L SIHK G GMGITY L NL na DFQ D - N AKIKVNNQTFE L EN wt LT DTAFKTQALFD G SIRHNK L 1035
Cdd:COG2911 373 Q L N G DLRLS G TLAA P QLN G Q L TLDD G RLKLPA L GV -- RLT D i N LRLRFDGDRLT L DG -- LT ADSGGGTLTLS G TVDLDG L 448
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1036 S d W FF DLTLK sq G KRFL VLN TK ytddalf YG T GFIQ G EA T VK G AI D ELVI S V N AKTEEGT q FKI P LPDSEG V GDDSFITF 1115
Cdd:COG2911 449 S - W PA DLTLK -- G DNLR VLN PP ------- DY T ATVS G DL T LT G TP D GPTL S G N VTVPRAR - ITL P ELPPSA V SLSDDVVV 517
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1116 IEKGNKNIKV E RT lesv K GL E L RFNMD V MPNAE V EI imdkk T G SN L VG R GE G T L LIEINTN G KFNMW G DFITYS G Y YN F k 1195
Cdd:COG2911 518 VNRPPEPVPE E EA ---- A GL P L DLDLN V NLGDD V RV ----- R G FG L DA R LG G D L RLTGTPG G APRLT G EINLVR G R YN A - 587
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1196 feni IDK R F T VLP g GSI SWS G D PL KAS L r D LK A AY T LN anpsvllessqynrki PTQVIIKLE G ELMQ P E tlfd IT F p D S 1275
Cdd:COG2911 588 ---- YGQ R L T IER - GSI TFN G P PL DPY L - D IE A VR T VD ---------------- DVTAGVRVT G TASN P K ---- IT L - F S 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1276 N P S L vselnyrma DE D rkrl QAF SLL AQ G SFMSERNTDN rlv A HN L FET AA G L FNQLLSDEDNK L N -- LG VS y EAG t ID S 1353
Cdd:COG2911 641 D P A L --------- PQ D ---- EIL SLL LF G RGLDSLSGGD --- A AQ L ASA AA S L LGGGGGGLLGQ L G sa LG LD - DLS - ID T 702
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1354 ASEINNS drl GF T FSTQI T EWAS V NAK VG I p VG G VTR tavagn AEVVL RLT ETGN L T A kfffrenewqqylld RI G YTQ G 1433
Cdd:COG2911 703 GGSGDGT --- SV T VGKYL T DRLY V SYG VG L - FD G LSE ------ VTLRY RLT RRLS L E A --------------- QS G TGN G 757
....*....
gi 1242567918 1434 AGIT Y SVD F 1442
Cdd:COG2911 758 VDLL Y RFE F 766
TamB
pfam04357 TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane ...
1014-1442
8.83e-48
TamB, inner membrane protein subunit of TAM complex; TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.
Pssm-ID: 461272 [Multi-domain]
Cd Length: 383
Bit Score: 176.05
E-value: 8.83e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1014 T LT DT A FKTQALFD G S I RHNK L S D WFF DLTL ks QGKRF LV L NTK YTD dalfygt G FIQ G EA T V KG AIDEL V I S VNAKTEE 1093
Cdd:pfam04357 2 G LT AR A NGGTLTLN G T I SLES L K D FEL DLTL -- SLNNL LV Y NTK DLR ------- G TVS G DL T L KG TLNQP V L S GELTVPS 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1094 G T QFKIPLP DSE GVGD - DSFIT F IEKGNKNIKVERTLESVK G LELRFNMDVMPNAEVEIIMDKKT --- G SN L VGRGE G T L 1169
Cdd:pfam04357 73 A T ILLYEAG DSE AASS r SGDVV F VDPESRTEEEPAKTAEDS G APTGLDLPLLLFLDLKLSLGPDV rvd G PG L RAELT G D L 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1170 LIEINT NG KFNMW G DFITYS G Y YNF kfeni ID K R F T v L P GG SISW SGDP LKASLR D LK A A YT L NA npsvll E SSQY NRKI 1249
Cdd:pfam04357 153 QVNGTA NG RPSLF G SIRVTR G T YNF ----- LG K T F D - L D GG EVTF SGDP PIDPTL D IT A I YT V NA ------ D SSQY TGRD 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1250 P TQ V IIKLE G E L MQ P E tlfd I T F p D S N P S L vselnyrmadedr KRLQAF SLL AQ G SFM S ERNT - DNRLV A HN L FET A A - G 1327
Cdd:pfam04357 221 P VK V GLNVT G T L SS P T ---- V T L - S S E P P L ------------- PETEIL SLL LL G RSL S DLSS g QLGAA A AS L LGS A G s G 282
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 1328 L FNQL L SDEDNK L N L - GV S YEAG T IDSASEINNSDR L GF T FSTQI T EWAS V NAKV G IPV GG VTRTA V agna EVVL RLT ET 1406
Cdd:pfam04357 283 L LSGQ L NKLRSA L G L d NL S LGSA T SSTGGDVTSGGG L VV T VGKYL T DRLY V SVGT G VGL GG SPTGD V ---- SIEY RLT PN 358
410 420 430
....*....|....*....|....*....|....*.
gi 1242567918 1407 GN L T AK F F FRENEWQQ ylldrigytqg AGIT Y SV DF 1442
Cdd:pfam04357 359 LS L R AK T F NGQTDESG ----------- VDLS Y KF DF 383
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
5-551
2.71e-11
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 67.76
E-value: 2.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 5 KR FG K I L FRFIW I T L LI L GVIA V L L A L PVTQTFIAKKVVNWLNKDYDVDIQ I E --------- KVHLKI n G N V AVKQL li N 75
Cdd:COG2982 1 KR LM K R L LIILA I L L VL L VAAL V A L P L LFDWNRLRPLIERQVSEATGREVT I D gdlslslfp WPGVTL - G D V TLSNP -- D 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 76 D F KKDT L IA A KE L QTS i L NFRQ L TE G N L YFGKVEA DG LIF N MKTHK g D TIS N L D VFVSKFDSG - KPSSGGFIMKAKSVNL 154
Cdd:COG2982 78 G F GGPP L AS A ER L ELD - L ALLP L LS G E L EVDEITL DG PVI N LERDA - D GRA N W D FLLAAAAAA a DAEASAWSLDIGRLEI 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 155 T NSNCYIS D ENKE dp SIIKVEN LN IN L KDF kvl DSEVF F DV q KANFVYDK nlyv KN L ETNFA f TDS L MSVDNLVFET D KS 234
Cdd:COG2982 156 T DGRLVYD D AASG -- ADLTLDD LN LT L SGP --- SLDGP F RL - SGSGRLNG ---- QP L TLDGK - IGG L LALGPYPLKL D LR 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 235 S LEGYVK L fpte DG FD D FEN rvl F D AKIS kas L ETTD L NTFYNAF GV ----------------- G KT L NIKN L S iq G V L N 297
Cdd:COG2982 225 S GDLRLS L ---- DG TV D LAG --- L D GQLA --- L SGPS L RDLLALL GV tlpepgpfslsgrltad G DR L RLED L K -- G T L G 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 298 D LKVS e G EIAYQNT --- IIE G NFNFKN L lddqkkiivkgkdvylesiyn DL AT L M P vqlgqnipsevqrlemfsvhgdll 374
Cdd:COG2982 293 D SDLT - G DLSVTGG drp ALT G DLASDR L --------------------- DL DD L L P ------------------------ 326
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 375 ytts A LE A NLELRSNKGNAS L DGMLDN L ENINDMIYKGTVATQG L DF G A L ladr SF G K L T AH M T VKGSGF DL AS L KMQA Y 454
Cdd:COG2982 327 ---- A AP A AAAAGAPAAARG L PDAPLD L SALRALDADVRLSADS L KL G G L ---- PL G D L A AH L T LDDGRL DL DP L SAGL Y 398
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 455 G kaes FHYN G ydyk NISV D GEFKNKVFNGRI S ANDIN L KMNFSG LA D F SKNNSKFDFQANIDVADLHALKFME S dsisk L 534
Cdd:COG2982 399 G ---- GTLS G ---- SLTL D ARGDPPRVALKL S LSGVD L GPLLPD LA G F DRLSGTLNGDLDLSGTGNSVAALLA S ----- L 465
570 580
....*....|....*....|..
gi 1242567918 535 K GS IVFD ----- I Q G N NL DDIV 551
Cdd:COG2982 466 N GS ASLS lgdga I S G L NL EQLL 487
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
183-598
3.98e-05
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 48.11
E-value: 3.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 183 DFKVL D SE V FFDVQKANFVYD ------ KN L YVKN L ETNFAFTDSLMSV DNL VFETDKSS L E G YVK L F ---------- PTE 246
Cdd:COG2911 6 GLTLR D DG V DLEADRLRLDWS plallr GR L CIDE L ALSASLDGDRLRL DNL DLDAPEGA L S G LLD L V qatldaegld LAS 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 247 DGF DD FE ----- NR VLFDAKI S K AS ------ L ETT DL NTFYNAF - G VGKT L NIK ----- N L SIQ G V L NDLKVS ege IAYQ 309
Cdd:COG2911 86 SAL DD LD lrsgg NR LTLSGNL S A AS ldgdld L DAP DL ADLAALL p G LAGS L SGD gldsl S L DAD G T L AQHRLD --- LDAK 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 310 NTIIEGNFNFKNL LD DQK kiivkgkdvyl ESIYND L AT L MPVQL G QNI P SEVQ - RLEMFSVHGDL L YTTSA L EANLE L rs 388
Cdd:COG2911 163 GEPASLSLALSGG LD RDD ----------- GGTLSR L DF L NTGRW G LAA P ATLS y DDGRVTLGPLC L AGGGS L CLSGT L -- 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 389 n K G NAS L DGM L D N -- L ENI N DMIYKGTVATQG L DFG A L L AD r SFGKLTAHMTVKG SG fdla S L KMQAYGKAE sfhyn GYD 466
Cdd:COG2911 230 - G G TLD L QLR L K N lp L ALL N PFLPDDLGLSGT L NGD A D L SG - GLANPQGDASLSL SG ---- D L TLNDGLGGL ----- PLG 298
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1242567918 467 YKNISVDGEFK N KVFNGRISANDIN L - KMNF SG --- LAD FSKNNSKF D FQANI D VA DL HA L KFMESDSISK L K G SIVF D I 542
Cdd:COG2911 299 LGDLTLNARLA N GRLTLDLTLDGGG L g TLSL SG svp LAD GLPPSAPL D GNLRL D NL DL AL L NPLLPGVLER L S G QLNG D L 378
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1242567918 543 Q - GNN L DD -- IV G TISFKNAQYTNS A DVFSFD D FEVTSTISKE gvk KI T INSPDII SG K 598
Cdd:COG2911 379 R l SGT L AA pq LN G QLTLDDGRLKLP A LGVRLT D INLRLRFDGD --- RL T LDGLTAD SG G 434
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
