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Conserved domains on  [gi|1239657239|gb|ASW52082|]
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hypothetical protein A7J09_08100 [Streptococcus suis]

Protein Classification

DUF3397 domain-containing protein( domain architecture ID 10570932)

DUF3397 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 9-118 4.02e-14

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


:

Pssm-ID: 432154  Cd Length: 112  Bit Score: 63.36  E-value: 4.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1239657239   9 KIVAFLFIFLTLAISIIAVKFFRLQNR--GWNFADIAFPLYAIEFYLISDKAYYNSLLPQLVLALSLLAIGLCGFFLLKK 86
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIVKKFRLKKKkaILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARKK 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1239657239  87 KNFLYRRFFKVFWRASFILTFLMYLALVIAVF 118
Cdd:pfam11877  81 GEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 9-118 4.02e-14

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


Pssm-ID: 432154  Cd Length: 112  Bit Score: 63.36  E-value: 4.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1239657239   9 KIVAFLFIFLTLAISIIAVKFFRLQNR--GWNFADIAFPLYAIEFYLISDKAYYNSLLPQLVLALSLLAIGLCGFFLLKK 86
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIVKKFRLKKKkaILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARKK 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1239657239  87 KNFLYRRFFKVFWRASFILTFLMYLALVIAVF 118
Cdd:pfam11877  81 GEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Name Accession Description Interval E-value
DUF3397 pfam11877
Protein of unknown function (DUF3397); This family of proteins are functionally ...
 9-118 4.02e-14

Protein of unknown function (DUF3397); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 114 to 128 amino acids in length.


Pssm-ID: 432154  Cd Length: 112  Bit Score: 63.36  E-value: 4.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1239657239   9 KIVAFLFIFLTLAISIIAVKFFRLQNR--GWNFADIAFPLYAIEFYLISDKAYYNSLLPQLVLALSLLAIGLCGFFLLKK 86
Cdd:pfam11877   1 IATIILFPLLVFLLVYFIVKKFRLKKKkaILLAADVTTPFLIIAVHFLSLVIFGISFLPYILLFLLILAIILAIIQARKK 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1239657239  87 KNFLYRRFFKVFWRASFILTFLMYLALVIAVF 118
Cdd:pfam11877  81 GEISYKRFFKLFWRLLFLLTFFLYLLLLIVGI 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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