|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-349 |
7.27e-148 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 420.79 E-value: 7.27e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTITNINlnNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNIIMLIA 160
Cdd:MTH00105 81 SGQWTITKLT--NPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00105 159 ILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00105 239 LMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFE 318
|
330 340
....*....|....*....|....*....
gi 1236518563 321 LKKRSLLLSPLIILSTLSLPLSPVFSTLN 349
Cdd:MTH00105 319 NTKPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-348 |
1.93e-109 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 322.91 E-value: 1.93e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTITNinLNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAiNLNIIMLIA 160
Cdd:MTH00135 81 TGQWDIQQ--MSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00135 158 LTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00135 238 ALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLP 317
|
330 340
....*....|....*....|....*...
gi 1236518563 321 LKKRSLLLSPLIILSTLSLPLSPVFSTL 348
Cdd:MTH00135 318 STQLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
6.06e-105 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 311.47 E-value: 6.06e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTItnINLNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNIIMLIA 160
Cdd:MTH00070 81 TGEWTI--MNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00070 159 LLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00070 239 TLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFK 318
|
330 340
....*....|....*....|...
gi 1236518563 321 LKKrSLLLSPLIILSTLSLPLSP 343
Cdd:MTH00070 319 NKT-NNLLSLTIILSLMLLPITP 340
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-348 |
3.02e-103 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 307.13 E-value: 3.02e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTITNinLNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNIIMLIA 160
Cdd:MTH00112 81 TGQWDITQ--LTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00112 159 ILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00112 239 TLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTK 318
|
330 340
....*....|....*....|....*...
gi 1236518563 321 LKKRSLLLSPLIILSTLsLPLSPVFSTL 348
Cdd:MTH00112 319 PKKNTLTATLTTLSTLL-LPLSPMILTI 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-348 |
8.09e-75 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 234.48 E-value: 8.09e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTITNinLNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNIIMLIA 160
Cdd:MTH00200 81 SGQWGISE--MLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00200 239 ILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTK 318
|
330 340
....*....|....*....|....*...
gi 1236518563 321 LKKrSLLLSPLIILSTLSLPLSPVFSTL 348
Cdd:MTH00200 319 SNS-NLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-309 |
1.80e-71 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 225.97 E-value: 1.80e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTItNINLNNmLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNIIMLIA 160
Cdd:MTH00041 81 SGSWSI-NGPLNT-LSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00041 159 ILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNP 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPT 309
Cdd:MTH00041 239 ISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.85e-47 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 162.69 E-value: 2.85e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 sgqwtitNINLNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMypaINLNIIMLIA 160
Cdd:MTH00160 81 -------NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIII 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00160 151 ILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFptpNNIKMKWQFQ 320
Cdd:MTH00160 231 KIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNY---NKNKWNLKKK 307
|
330 340
....*....|....*....|....*
gi 1236518563 321 LKKRSLLLSPLIILSTLSLPLSPVF 345
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-317 |
2.85e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 152.35 E-value: 2.85e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWtitninlnnmLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINL-NIIMLI 159
Cdd:MTH00144 81 SFSW----------FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 160 ALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMltITMFTMLNMNTNTTTLTLSNLWSKS 239
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIV--SSGFLFFSLWSGDSGSMKDLGSLKP 228
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1236518563 240 PTITTMILISLLSLGG-LPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKW 317
Cdd:MTH00144 229 SYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-301 |
3.24e-42 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 149.54 E-value: 3.24e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 1 MKPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00011 3 STFPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTITninlnnmlTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNIIMLIA 160
Cdd:MTH00011 83 PSLLKNI--------TALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSP 240
Cdd:MTH00011 155 AMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQ 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1236518563 241 TITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYS 301
Cdd:MTH00011 235 TTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
7-302 |
2.08e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 125.94 E-value: 2.08e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 7 MIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFtivfnamhsGQWTI 86
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLM---------GGSLS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 87 TNINLNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPIsiMIQMYPAINLNIIMLIALLSILA 166
Cdd:MTH00197 72 FSNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPL--LILAFNSSSFMGLLICSVLSSLI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 167 GGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWSKSPTITTMI 246
Cdd:MTH00197 150 GGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFL 229
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1236518563 247 LISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYST 302
Cdd:MTH00197 230 GLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
4-190 |
1.33e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 98.17 E-value: 1.33e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 4 PILMIImmtIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLT-NNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSG 82
Cdd:MTH00199 100 PILILI---VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 83 QWTITNIN--LNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINlnIIMLIA 160
Cdd:MTH00199 177 ETSIQGINsiLTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICA 254
|
170 180 190
....*....|....*....|....*....|
gi 1236518563 161 LLSILAGGWGGLNQTQLRKILAYSSIAHMG 190
Cdd:MTH00199 255 VLSIIYGAIGALNQTKIKRLLAYSGIGHMG 284
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-213 |
4.60e-20 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 88.91 E-value: 4.60e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 23 SSHWLLIWIGLEINMLSIIPMLTNNPK-PRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNI---------NLN 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKsPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 93 NMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLL-TWQKLAPISIM-----IQMYPAINLNIIMLIALLSILA 166
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIrrsllYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1236518563 167 GGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLML 213
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLT 207
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-300 |
6.03e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 90.56 E-value: 6.03e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 8 IIMMTIFTGTMLTMISSHWLLIWIGLEINMLS---IIPMLTNNPkpRSTEAATKYFLTQATASMLLMF----------TI 74
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSlyvLVAFRRDDR--RSSEAALKYFLLGALSSGFLLYgisllygatgSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 75 VFNAMHSGQWTITNINLNNMLTSFTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPIS----IMIQMYPA 150
Cdd:COG1007 184 NLAGIAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAallrLLVEAFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 151 IN---LNIIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSL----TMLNLYIYLMLTITMFTMLNM 223
Cdd:COG1007 264 LAadwQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 224 NTNTTTLTLSN-----LWSKSPTITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRL 298
Cdd:COG1007 344 LSRKGGEAEEIedlagLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
..
gi 1236518563 299 IY 300
Cdd:COG1007 424 VK 425
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-299 |
8.45e-20 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 90.01 E-value: 8.45e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 8 IIMMTIFTGTMLTMISSHWLLIWIGLEINMLSI-IPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTI 86
Cdd:TIGR01770 106 ILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 87 TNINLNNMLTSFT----------MIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAI----- 151
Cdd:TIGR01770 186 EDLLLFLSNGMLNisllllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfs 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 152 --NLNIIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLMLTITMfTMLNMNTNTTT 229
Cdd:TIGR01770 266 eaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALM-SLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 230 LTLSNLWSKS-----------PTITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRL 298
Cdd:TIGR01770 345 RSYKDEWIEYisdfaglfktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
.
gi 1236518563 299 I 299
Cdd:TIGR01770 425 V 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-299 |
1.17e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 88.55 E-value: 1.17e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 16 GTMLTMISSHWLLIWIGLEINMLSI-IPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNINL-NN 93
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLvLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 94 MLTSFT----------MIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINlnIIMLIALLS 163
Cdd:MTH00196 85 SGQSFSsvsvpigyllIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 164 ILAGGWGGLNQTQLRKILAYSSIAHMG---WMMAILMFC---PSLTMLNLYIYLMLTITMFTMLNMNTNTTTLTLSNLWS 237
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFEsiqASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSGLSR 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1236518563 238 KSPTITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLI 299
Cdd:MTH00196 243 RLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIV 304
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-299 |
6.74e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 78.32 E-value: 6.74e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 4 PILMIIMmtifTGTMLTMISS-HWLLIWIGLEINMLS--IIPMLtNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:PRK05777 106 YLLVLFA----LLGMMVMVSAnDLLTLFLGLELLSLPlyALAAL-RRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGA 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 81 SGQWTITNI-------NLNNMLTSFT---MIIALTMKLGMTPFHFWVPEVTQG-----VSLMTG-------MLLLTWQKL 138
Cdd:PRK05777 181 TGSLSFAGIakaladgSGNSLLLLFGlvfLLVGLAFKLSAVPFHMWTPDVYEGaptpvTAFLATapkiaafAVLLRLLVV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 139 APISIMIQMYPainlnIIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSL----TMLNLYIYLMLT 214
Cdd:PRK05777 261 AFGGLSEDWQQ-----VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMT 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 215 ITMFTMLNMNTNTTTLTLSN-----LWSKSPTITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMAL 289
Cdd:PRK05777 336 LGAFGVISLLRRKGGEAESIsdfagLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSA 415
|
330
....*....|
gi 1236518563 290 LNLYFYMRLI 299
Cdd:PRK05777 416 IGAFYYLRVI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-193 |
6.22e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 66.42 E-value: 6.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 16 GTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRST---------EAATKYFLTQATASMLLMFTIVF---------- 76
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALyfgftgnegm 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 77 -NAMHSGQWTITNINLNNMLTSFTMI-IALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMypAINLN 154
Cdd:MTH00198 280 lGTILSATLETTNIELRQGSLGYLFItVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSL--VITSK 357
|
170 180 190
....*....|....*....|....*....|....*....
gi 1236518563 155 IIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIL 396
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
15-303 |
7.63e-11 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 62.86 E-value: 7.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 15 TGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNI----- 89
Cdd:COG0651 118 AGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarla 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 90 NLNNMLTSFT---MIIALTMKLGMTPFHFWVPEV----TQGVS-LMTGMLLltwqKLAPISIM---IQMYPAINLN---- 154
Cdd:COG0651 198 ELDPGLLLAAfalLLVGFGIKAALFPLHFWLPDAypaaPSPVSaLLSGLLT----KVGVYAILrvlTLLFGADPALflgt 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 155 IIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYL----MLTITMF----TMLNMNTN 226
Cdd:COG0651 274 LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFlaagAIERATGT 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1236518563 227 TTTLTLSNLWSKSPTITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTS 303
Cdd:COG0651 354 RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-194 |
1.84e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 61.64 E-value: 1.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 55 AATKYFLTQATASMLLMFTIVFNAMHSGQWT-----ITNINLNNMLTSFTMI---IALTMKLGMTPFHFWVPEV-----T 121
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiaeLAAAPLPLTAQLLLFLaffIAFAVKVPMFPFHTWLPDAhveapT 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1236518563 122 QGVSLMTGMLLltwqKLAP---ISIMIQMYP---AINLNIIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMA 194
Cdd:COG1008 242 AGSVLLAGVLL----KMGGyglLRFALPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLL 316
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-193 |
3.57e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 57.73 E-value: 3.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 2 KPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHS 81
Cdd:PRK12561 85 KPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 82 GQWT--ITNINLNNMLTSFTM------IIALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMYP 149
Cdd:PRK12561 165 DTFTfdLAELGAKSYPLALELllyagfLIAFGVKLPIFPLHTWLPdahgEASAPVSMILAGVLLKMGGYALIRFNVQMLP 244
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1236518563 150 AINLNIIMLIALLSILAGGWGGLN---QTQLRKILAYSSIAHMGWMM 193
Cdd:PRK12561 245 DAHVYFAPALAILGVVNIIYGALNafaQDNVKRRLAYSSVSHMGFVL 291
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-193 |
8.71e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 56.49 E-value: 8.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 6 LMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNA-MHSGQW 84
Cdd:TIGR01972 108 FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 85 TITNINLNNMLTSFTMI------IALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLLltwqKLAPISIM---IQMYP- 149
Cdd:TIGR01972 188 DLLELLNLPLPFGVQTWlflaffIAFAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTYGFLrfnLPLFPd 263
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1236518563 150 --AINLNIIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:TIGR01972 264 asLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-193 |
1.63e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 52.90 E-value: 1.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 55 AATKYFL-TQAT-----ASMLLMFTIVFNAMHSGQW-TITNINLNNMLTSFTMI---IALTMKLGMTPFHFWVPEV---- 120
Cdd:PRK05846 162 AATKFFLyTLLGsllmlVAIIYLVVVYYNATGTFDIaDLLNLPLPPGVQYWLFLaffIAFAVKMPMFPLHTWLPDAhvqa 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 121 -TQGVSLMTGMLLltwqKLAP---ISIMIQMYPAINLN---IIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK05846 242 pTAGSVLLAGILL----KMGAyglLRFSLPLFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT 317
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-193 |
3.89e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 51.42 E-value: 3.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 33 LEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGqwTITNINLNNMLTSFT--------MIIAL 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTG--TLNMADLAGALAENPtvvtafgfVLLAL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 105 TMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMYP------AINLNIIMLIALLSILAGGWGGLNQ 174
Cdd:PRK08375 213 ALKAAVFPLHTWLPraypAAPPVVTALLSGLVTKVAVYALIRIYFTVFGgdfrfaLGLGWLLAVLALLSMLVGSLAALGQ 292
|
170
....*....|....*....
gi 1236518563 175 TQLRKILAYSSIAHMGWMM 193
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYIL 311
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
7-299 |
5.54e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 51.21 E-value: 5.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 7 MIIMMTIFTGTMLTMISSHWLLIWIGLEinMLSIIP-MLTNNPK--PRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQ 83
Cdd:PRK02504 113 AAILLTATLGGMFLSGATELVMIFISLE--TLSIASyLLTGYMKrdPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 84 WTITNINLNNMLTSFTMIIALTM---------KLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLA----PISIMIQMYPA 150
Cdd:PRK02504 191 STQLSAIALALITSPSLGLALALvfviagiafKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 151 INLN---IIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMaILMFCP-----SLTMLNLYIYLMLTITMFTMLN 222
Cdd:PRK02504 271 FDEQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM-IGLVAGteagyASMVFYLLAYLFMNLGAFACVI 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 223 MNTNTTTLTLSNLWS----KSPTITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRL 298
Cdd:PRK02504 350 LFSLRTGTDQISDYAglyqKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRV 429
|
.
gi 1236518563 299 I 299
Cdd:PRK02504 430 I 430
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-193 |
4.57e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 48.17 E-value: 4.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 47 NPKPRSTEAATKYFLTQATASMLLMFTIvfnAMHSGQWTITNINLNNMLTSFTM-----------IIALTMKLGMTPFHF 115
Cdd:PRK08376 165 NDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAVKMSENPtvvakialalfIAGLAMKSGAVPVHM 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 116 WVPEV-TQGVSLMTGMLLLTWQK--LAPISIMIQMY-PAINLN----IIMLIALLSILAGGWGGLNQTQLRKILAYSSIA 187
Cdd:PRK08376 242 WLPDAyPAAPSSISAMLLVIKQAglYALARVLFSIYgPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
|
....*.
gi 1236518563 188 HMGWMM 193
Cdd:PRK08376 322 QIGYML 327
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
293-343 |
7.56e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 42.63 E-value: 7.56e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1236518563 293 YFYMRLIYSTSLTLFPTPNNIKMKWQFQLKKRSLLLSPLIILSTLSLPLSP 343
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
11-196 |
1.36e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 46.68 E-value: 1.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 11 MTIFTGTMLTM-ISSHWLLIWIGLEinMLSIIPML---TNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTI 86
Cdd:COG1009 117 LLLFMAAMLGLvLSDNLLLLFVFWE--LVGLCSYLligFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 87 TNI--NLNNMLTSFTMIIALTM-------KLGMTPFHFWVPE-----------------VTQGVSLMTgmllltwqKLAP 140
Cdd:COG1009 195 SELlaAAPTILSSPLLTLILLLlllgafgKSAQFPLHFWLPDamegptpvsallhaatmVKAGVYLLA--------RLSP 266
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1236518563 141 IsimIQMYPAInLNIIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAIL 196
Cdd:COG1009 267 L---FALSPVW-LTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL 318
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-192 |
5.35e-05 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 44.92 E-value: 5.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 10 MMTIFTGTM-LTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFL------TQATASMLLMFTIVFNAMHSG 82
Cdd:PRK06458 113 MYQLFLFTMlLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 83 QWTI--TNIN-----LNNMLTSFTMIIALT---MKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMY 148
Cdd:PRK06458 193 EMAIlwTELLkhaslLDPTLMKLAFVFLLIgfgTKVGLFPMHAWLPdahsEAPSPVSALLSGVLLNVALYAVLRYYILID 272
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1236518563 149 PAINL----NIIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWM 192
Cdd:PRK06458 273 AAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
68-213 |
2.26e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 42.73 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 68 MLL-MFTIVFNAMHSGQWTITNINLNNMLTSFTMI---IALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLLltwqKL 138
Cdd:MTH00217 176 MLLgIFTLYSYAGTTDYQALCCLKIEKELQYFIFLgffLSLAIKIPKIPFHIWLPQAhveapVAGSVILAGVLL----KL 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 139 AP---ISIMIQMYPAINLNIIMLIALLSILAGGWGGLN---QTQLRKILAYSSIAHMGwMMAILMFCPSLTMLNLYIYLM 212
Cdd:MTH00217 252 GGygfIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTtcrQVDLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIFLM 330
|
.
gi 1236518563 213 L 213
Cdd:MTH00217 331 L 331
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-213 |
9.74e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 9.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 100 MIIALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLL-LTWQKLAPISIMIQMYPAINLN-IIMLIALLSILAGGWGGL 172
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLkLGGYGLVRLSWPILPLGAQNLApAVIAMGIVGIVYGSFATC 315
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1236518563 173 NQTQLRKILAYSSIAHMGwMMAILMFCPSLTMLNLYIYLML 213
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIML 355
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
100-193 |
1.10e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.84 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 100 MIIALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNI---IMLIALLSILAGGWGGL 172
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPdahvEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAI 290
|
90 100
....*....|....*....|.
gi 1236518563 173 NQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK06473 291 AQKDMKKMVAYSSIGHMGYIL 311
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-193 |
1.34e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 2 KPPILMIIMMTIFTGTMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHS 81
Cdd:PRK02546 113 KPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 82 GQWT--ITNINLNNMLTSFTM------IIALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMYP 149
Cdd:PRK02546 193 DTPTfdMTALAAKDFGLGFQLlcyaglLIAYGVKLPIVPLHTWLPdahgEATAPVHMLLAGILLKMGGYALLRMNAGMLP 272
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1236518563 150 AINLN---IIMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK02546 273 DAHAQfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-301 |
2.09e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.80 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 17 TMLTMISSHWLLIWIGLEINMLSIIPMLTNNPKPRSTEAATKYFLTQATASMLLMF---TIVFNAMHSGQWTITNI-NLN 92
Cdd:PRK06589 129 GVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLpavILIYTKTGNLDFVSGGLfSKN 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 93 NMLTSFTMIIALTMKLGMTPFHFWVPE-----------------VTQGVSLMTGMLLLTWqKLAPISIMIQMYpainlNI 155
Cdd:PRK06589 209 QSIILLLMFIYGIAKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIF-GLSYLQRIFAEF-----NW 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 156 IMLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYLM--------LTITMFTMLNMNTNT 227
Cdd:PRK06589 283 LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVshsfakicLFYSMGSIYSLKKED 362
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1236518563 228 TTLTLSNLWSKSPTITTMILISLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIM----ALLNLYFYMRLIYS 301
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviasSILSALYLLKILSS 440
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-301 |
3.17e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 39.18 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 49 KPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNINLNNMLTSFTM-------------------IIALTMKLG 109
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLtgglagnpplalgvalalaLWAFTIKAA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 110 MTPFHFWVPEV----TQGVSLMTGMLLLTWQKLAPISIM---------IQMYPAINLNIIMLIALLSILAGGWGGLNQTQ 176
Cdd:PRK12667 239 IFPNHFWLPDAhpaaPSPVSAMLSGLVVNVGAYAIIRFLytifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 177 LRKILAYSSIAHMGWMMAILMFCPSLTMLNLYIYL--------MLTITMFTMLNMNTNTTTLTLSNLWSKSPTITTMILI 248
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIinhaiaksLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1236518563 249 SLLSLGGLPPLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYS 301
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
102-213 |
4.13e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.89 E-value: 4.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 102 IALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLLltwqKLAP---ISIMIQMYPAINLNIIMLIALLSILAGGWGGL- 172
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAhveapVAGSVILAGILL----KLGGygfLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLt 292
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1236518563 173 --NQTQLRKILAYSSIAHMGwMMAILMFCPSLTMLNLYIYLML 213
Cdd:MTH00204 293 tcRQVDFKRLIAYSSVAHMG-LVPLGLFTHTIEGLVAAVFLML 334
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
100-193 |
7.96e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 37.81 E-value: 7.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 100 MIIALTMKLGMTPFHFWVPEV-TQGVSLMTGMLLLTWQKLAPISImIQMYP--------AINLNIIMLIALLSILAGGWG 170
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGI-LRLSAllrqsgaaEQFSNVLIGLGIFSIAVAAFS 290
|
90 100
....*....|....*....|...
gi 1236518563 171 GLNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK08676 291 MLSQRNLKKLIAFSSIEHMGLML 313
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
85-193 |
8.36e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 37.77 E-value: 8.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 85 TITNINLNNMLTSFTMI-IALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMYP---AINLNII 156
Cdd:PRK07363 195 STQNLSLNTQLILLTGLlLGFGIKIPLVPLHTWLPdaytEASPAVAILLGGVLAKLGTYGLLRFGLQLFPqtwSLVAPGL 274
|
90 100 110
....*....|....*....|....*....|....*..
gi 1236518563 157 MLIALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK07363 275 AIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYIL 311
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
98-319 |
9.67e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 37.16 E-value: 9.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 98 FTMIIALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMYPAINLNIIMLIALLSILAggwgGLNQTQL 177
Cdd:MTH00091 61 YFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQ----MFLLKSY 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1236518563 178 RKILAYSSIAHMGWMMAILMFCPSLTMlnlYIYLMLTITMFtmlnmntntttlTLSNLWSKSPTITTMILISLLSLGGLP 257
Cdd:MTH00091 137 KNLLILSSTESFNWLILSFFFSFFNVF---FLFFYYFLLML------------FLIPKFNNVNKLNFVSWETLLVFMNLP 201
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1236518563 258 PLTGFIPKWIIIQELTKNNNITMATIMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQF 319
Cdd:MTH00091 202 FSVTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFF 263
|
|
|