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Conserved domains on  [gi|1232302611|gb|OYV85676|]
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hypothetical protein B7Z63_05145 [Ignavibacteriae bacterium 37-53-5]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_tranf_GTA_type super family cl11394
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
 15-99 1.24e-27

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


The actual alignment was detected with superfamily member cd06433:

Pssm-ID: 472172 [Multi-domain]  Cd Length: 202  Bit Score: 103.78  E-value: 1.24e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  15 SVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLNIVISSQQDFGIYDALNRAIRIASGDYYI 94
Cdd:cd06433     1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALATGDIIG 80


                  ....*
gi 1232302611  95 VCGAG 99
Cdd:cd06433    81 FLNSD 85
TrkA_N pfam02254
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ...
 93-208 3.47e-27

TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.


:

Pssm-ID: 426679 [Multi-domain]  Cd Length: 115  Bit Score: 100.29  E-value: 3.47e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  93 YIVCGAGRVGEYIQEELEATGRaLVLVEKNLAHLSE-RFKGSSTVLmleGDPTSDEVLQEAGILRAKGLFAALGTDKDNL 171
Cdd:pfam02254   1 IIIIGYGRVGRSLAEELSEGGD-VVVIDKDEERVEElREEGVPVVV---GDATDEEVLEEAGIEEADAVIAATGDDEANI 76

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1232302611 172 FVVLSARGLNPQLRIVARADDEETRPKLMRAGADAVI 208
Cdd:pfam02254  77 LIVLLARELNPDKKIIARANDPEHAELLRRLGADHVI 113
 
Name Accession Description Interval E-value
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
 15-99 1.24e-27

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 103.78  E-value: 1.24e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  15 SVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLNIVISSQQDFGIYDALNRAIRIASGDYYI 94
Cdd:cd06433     1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALATGDIIG 80


                  ....*
gi 1232302611  95 VCGAG 99
Cdd:cd06433    81 FLNSD 85
TrkA_N pfam02254
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ...
 93-208 3.47e-27

TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.


Pssm-ID: 426679 [Multi-domain]  Cd Length: 115  Bit Score: 100.29  E-value: 3.47e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  93 YIVCGAGRVGEYIQEELEATGRaLVLVEKNLAHLSE-RFKGSSTVLmleGDPTSDEVLQEAGILRAKGLFAALGTDKDNL 171
Cdd:pfam02254   1 IIIIGYGRVGRSLAEELSEGGD-VVVIDKDEERVEElREEGVPVVV---GDATDEEVLEEAGIEEADAVIAATGDDEANI 76

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1232302611 172 FVVLSARGLNPQLRIVARADDEETRPKLMRAGADAVI 208
Cdd:pfam02254  77 LIVLLARELNPDKKIIARANDPEHAELLRRLGADHVI 113
TrkA COG0569
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ...
 91-208 6.06e-27

Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440335 [Multi-domain]  Cd Length: 296  Bit Score: 104.38  E-value: 6.06e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  91 DYYIVCGAGRVGEYIQEELEATGRALVLVEKN---LAHLSERFkgsstVLMLEGDPTSDEVLQEAGILRAKGLFAALGTD 167
Cdd:COG0569    96 MHVIIIGAGRVGRSLARELEEEGHDVVVIDKDperVERLAEED-----VLVIVGDATDEEVLEEAGIEDADAVIAATGDD 170

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1232302611 168 KDNLFVVLSARGLNPqLRIVARADDEETRPKLMRAGADAVI 208
Cdd:COG0569   171 EANILACLLAKELGV-PRIIARANDPEYADLLERLGADVVI 210
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 11-98 1.67e-21

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 88.22  E-value: 1.67e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  11 QPTISVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLN---IVISSQQDFGIYDALNRAIRI 87
Cdd:COG0463     1 MPLVSVVIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKDpriRVIRLERNRGKGAARNAGLAA 80

                          90
                  ....*....|.
gi 1232302611  88 ASGDYYIVCGA 98
Cdd:COG0463    81 ARGDYIAFLDA 91
PRK10537 PRK10537
voltage-gated potassium channel protein;
91-208 7.06e-13

voltage-gated potassium channel protein;


Pssm-ID: 236711 [Multi-domain]  Cd Length: 393  Bit Score: 66.58  E-value: 7.06e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  91 DYYIVCGAGRVGEYIQEELEATGRALVLVeknLAHLSERFKGSSTVLMlEGDPTSDEVLQEAGILRAKGLFAALGTDKDN 170
Cdd:PRK10537  241 DHFIICGHSPLAINTYLGLRQRGQAVTVI---VPLGLEHRLPDDADLI-PGDSSDSAVLKKAGAARARAILALRDNDADN 316

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1232302611 171 LFVVLSARGLNPQLRIVARADDEETRPKLMRAGADAVI 208
Cdd:PRK10537  317 AFVVLAAKEMSSDVKTVAAVNDSKNLEKIKRVHPDMIF 354
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
 15-119 1.15e-12

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 63.57  E-value: 1.15e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  15 SVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLN---IVISSQQDFGIYDALNRAIRIASGD 91
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKDprvRVIRLPENRGKAGARNAGLRAATGD 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1232302611  92 YYIVCGA------GRVgEYIQEELEATGRALVLV 119
Cdd:pfam00535  81 YIAFLDAddevppDWL-EKLVEALEEDGADVVVG 113
PRK10073 PRK10073
putative glycosyl transferase; Provisional
 12-92 2.64e-06

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 46.96  E-value: 2.64e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  12 PTISVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTG--LNIVISSQQDFGIYDALNRAIRIAS 89
Cdd:PRK10073    6 PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAEnyPHVRLLHQANAGVSVARNTGLAVAT 85


                  ...
gi 1232302611  90 GDY 92
Cdd:PRK10073   86 GKY 88
 
Name Accession Description Interval E-value
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
 15-99 1.24e-27

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 103.78  E-value: 1.24e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  15 SVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLNIVISSQQDFGIYDALNRAIRIASGDYYI 94
Cdd:cd06433     1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALATGDIIG 80


                  ....*
gi 1232302611  95 VCGAG 99
Cdd:cd06433    81 FLNSD 85
TrkA_N pfam02254
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ...
 93-208 3.47e-27

TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.


Pssm-ID: 426679 [Multi-domain]  Cd Length: 115  Bit Score: 100.29  E-value: 3.47e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  93 YIVCGAGRVGEYIQEELEATGRaLVLVEKNLAHLSE-RFKGSSTVLmleGDPTSDEVLQEAGILRAKGLFAALGTDKDNL 171
Cdd:pfam02254   1 IIIIGYGRVGRSLAEELSEGGD-VVVIDKDEERVEElREEGVPVVV---GDATDEEVLEEAGIEEADAVIAATGDDEANI 76

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1232302611 172 FVVLSARGLNPQLRIVARADDEETRPKLMRAGADAVI 208
Cdd:pfam02254  77 LIVLLARELNPDKKIIARANDPEHAELLRRLGADHVI 113
TrkA COG0569
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ...
 91-208 6.06e-27

Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440335 [Multi-domain]  Cd Length: 296  Bit Score: 104.38  E-value: 6.06e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  91 DYYIVCGAGRVGEYIQEELEATGRALVLVEKN---LAHLSERFkgsstVLMLEGDPTSDEVLQEAGILRAKGLFAALGTD 167
Cdd:COG0569    96 MHVIIIGAGRVGRSLARELEEEGHDVVVIDKDperVERLAEED-----VLVIVGDATDEEVLEEAGIEDADAVIAATGDD 170

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1232302611 168 KDNLFVVLSARGLNPqLRIVARADDEETRPKLMRAGADAVI 208
Cdd:COG0569   171 EANILACLLAKELGV-PRIIARANDPEYADLLERLGADVVI 210
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 11-98 1.67e-21

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 88.22  E-value: 1.67e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  11 QPTISVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLN---IVISSQQDFGIYDALNRAIRI 87
Cdd:COG0463     1 MPLVSVVIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKDpriRVIRLERNRGKGAARNAGLAA 80

                          90
                  ....*....|.
gi 1232302611  88 ASGDYYIVCGA 98
Cdd:COG0463    81 ARGDYIAFLDA 91
Kch COG1226
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism];
94-208 6.72e-21

Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism];


Pssm-ID: 440839 [Multi-domain]  Cd Length: 279  Bit Score: 87.86  E-value: 6.72e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  94 IVCGAGRVGEYIQEELEATGRALVLVEKNLAHLSE-RFKGSSTVLmleGDPTSDEVLQEAGILRAKGLFAALGTDKDNLF 172
Cdd:COG1226   128 IIAGFGRVGQIVARLLRAEGIPFVVIDLDPERVEElRRFGIKVYY---GDATRPDVLEAAGIERARALVVAIDDPEAALR 204

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1232302611 173 VVLSARGLNPQLRIVARADDEETRPKLMRAGADAVI 208
Cdd:COG1226   205 IVELARELNPDLKIIARARDREHAEELRQAGADEVV 240
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
11-96 1.04e-18

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 80.42  E-value: 1.04e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  11 QPTISVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLNI-VISSQQDFGIYDALNRAIRIAS 89
Cdd:COG1216     2 RPKVSVVIPTYNRPELLRRCLESLLAQTYPPFEVIVVDNGSTDGTAELLAALAFPRVrVIRNPENLGFAAARNLGLRAAG 81


                  ....*..
gi 1232302611  90 GDYYIVC 96
Cdd:COG1216    82 GDYLLFL 88
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
 16-98 5.69e-15

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 69.46  E-value: 5.69e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  16 VVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRS---VTGLNIVISSQQDFGIYDALNRAIRIASGDY 92
Cdd:cd00761     1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEyakKDPRVIRVINEENQGLAAARNAGLKAARGEY 80


                  ....*.
gi 1232302611  93 YIVCGA 98
Cdd:cd00761    81 ILFLDA 86
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
 1-95 6.14e-14

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 69.00  E-value: 6.14e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611   1 MPLSDSETEKQPTISVVTATWNAAQHLPGLITSLQGQT--DKEFEWVVADGASDDGTLELLRSVTGLNI---VISSQQDF 75
Cdd:COG1215    18 LARRRRAPADLPRVSVIIPAYNEEAVIEETLRSLLAQDypKEKLEVIVVDDGSTDETAEIARELAAEYPrvrVIERPENG 97

                          90       100
                  ....*....|....*....|
gi 1232302611  76 GIYDALNRAIRIASGDYYIV 95
Cdd:COG1215    98 GKAAALNAGLKAARGDIVVF 117
PRK10537 PRK10537
voltage-gated potassium channel protein;
91-208 7.06e-13

voltage-gated potassium channel protein;


Pssm-ID: 236711 [Multi-domain]  Cd Length: 393  Bit Score: 66.58  E-value: 7.06e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  91 DYYIVCGAGRVGEYIQEELEATGRALVLVeknLAHLSERFKGSSTVLMlEGDPTSDEVLQEAGILRAKGLFAALGTDKDN 170
Cdd:PRK10537  241 DHFIICGHSPLAINTYLGLRQRGQAVTVI---VPLGLEHRLPDDADLI-PGDSSDSAVLKKAGAARARAILALRDNDADN 316

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1232302611 171 LFVVLSARGLNPQLRIVARADDEETRPKLMRAGADAVI 208
Cdd:PRK10537  317 AFVVLAAKEMSSDVKTVAAVNDSKNLEKIKRVHPDMIF 354
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
 15-119 1.15e-12

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 63.57  E-value: 1.15e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  15 SVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLN---IVISSQQDFGIYDALNRAIRIASGD 91
Cdd:pfam00535   1 SVIIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKDprvRVIRLPENRGKAGARNAGLRAATGD 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1232302611  92 YYIVCGA------GRVgEYIQEELEATGRALVLV 119
Cdd:pfam00535  81 YIAFLDAddevppDWL-EKLVEALEEDGADVVVG 113
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
 13-111 1.78e-12

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 64.56  E-value: 1.78e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  13 TISVVTATWNAAQHLPGLITSLQGQTD--KEFEWVVADGASDDGTLELLRSVTGLNIVISsqqdfgIYD--------ALN 82
Cdd:cd02525     1 FVSIIIPVRNEEKYIEELLESLLNQSYpkDLIEIIVVDGGSTDGTREIVQEYAAKDPRIR------LIDnpkriqsaGLN 74

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1232302611  83 RAIRIASGDYYIVCGA-GRVGE-YIQEELEA 111
Cdd:cd02525    75 IGIRNSRGDIIIRVDAhAVYPKdYILELVEA 105
GT_2_like_a cd02522
GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; ...
 14-92 3.45e-10

GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133013 [Multi-domain]  Cd Length: 221  Bit Score: 57.58  E-value: 3.45e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  14 ISVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSvtGLNIVISSQ-----QdfgiydaLNRAIRIA 88
Cdd:cd02522     1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGTVAIARS--AGVVVISSPkgrarQ-------MNAGAAAA 71


                  ....
gi 1232302611  89 SGDY 92
Cdd:cd02522    72 RGDW 75
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 16-95 1.71e-09

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 54.87  E-value: 1.71e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  16 VVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTGLNIVISSQQDFGIYDALNRAIRIASGDYYIV 95
Cdd:cd04186     1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFPEVRLIRNGENLGFGAGNNQGIREAKGDYVLL 80
GT_2_like_d cd04196
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 15-133 7.39e-08

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133039 [Multi-domain]  Cd Length: 214  Bit Score: 51.09  E-value: 7.39e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  15 SVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELL----RSVTGLNIVISSQQDFGIYDALNRAIRIASG 90
Cdd:cd04196     1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIkeyiDKDPFIIILIRNGKNLGVARNFESLLQAADG 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1232302611  91 DYYIVCG------AGRVGEYIQEELEATGRALV-----LVEKNLAHLSERFKGS 133
Cdd:cd04196    81 DYVFFCDqddiwlPDKLERLLKAFLKDDKPLLVysdleLVDENGNPIGESFFEY 134
trkA PRK09496
Trk system potassium transporter TrkA;
94-194 1.46e-07

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 50.89  E-value: 1.46e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  94 IVCGAGRVGEYIQEELEATGRALVLVEKN---LAHLSERFKgsstVLMLEGDPTSDEVLQEAGILRAkGLFAALgTDKD- 169
Cdd:PRK09496    4 IIVGAGQVGYTLAENLSGENNDVTVIDTDeerLRRLQDRLD----VRTVVGNGSSPDVLREAGAEDA-DLLIAV-TDSDe 77

                          90       100
                  ....*....|....*....|....*.
gi 1232302611 170 -NLFVVLSARGLNPQLRIVARADDEE 194
Cdd:PRK09496   78 tNMVACQIAKSLFGAPTTIARVRNPE 103
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
 11-98 7.17e-07

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 48.35  E-value: 7.17e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  11 QPTISVVTATWNAAQHLPGLITSLQGQT--DKEFEWVVADGASDDGTLELLRSVTGLNI-VISSQQDFGIYDALNRAIRI 87
Cdd:cd06439    28 LPTVTIIIPAYNEEAVIEAKLENLLALDypRDRLEIIVVSDGSTDGTAEIAREYADKGVkLLRFPERRGKAAALNRALAL 107

                          90
                  ....*....|.
gi 1232302611  88 ASGDYYIVCGA 98
Cdd:cd06439   108 ATGEIVVFTDA 118
GT2_Chondriotin_Pol_N cd06420
N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin ...
 16-94 8.78e-07

N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.


Pssm-ID: 133042 [Multi-domain]  Cd Length: 182  Bit Score: 47.57  E-value: 8.78e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  16 VVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELL---RSVTGLNIVISSQQDFGIYDA--LNRAIRIASG 90
Cdd:cd06420     1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIeefKSQFPIPIKHVWQEDEGFRKAkiRNKAIAAAKG 80


                  ....
gi 1232302611  91 DYYI 94
Cdd:cd06420    81 DYLI 84
DPM_DPG-synthase_like cd04179
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ...
 16-95 8.85e-07

DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133022 [Multi-domain]  Cd Length: 185  Bit Score: 47.57  E-value: 8.85e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  16 VVTATWNAAQHLPGLITSLQ--GQTDKEFEWVVADGASDDGTLELLRS---VTGLNIVISSQQDFGIYDALNRAIRIASG 90
Cdd:cd04179     1 VVIPAYNEEENIPELVERLLavLEEGYDYEIIVVDDGSTDGTAEIARElaaRVPRVRVIRLSRNFGKGAAVRAGFKAARG 80


                  ....*
gi 1232302611  91 DYYIV 95
Cdd:cd04179    81 DIVVT 85
trkA PRK09496
Trk system potassium transporter TrkA;
94-178 9.64e-07

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 48.58  E-value: 9.64e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  94 IVCGAGRVGEYIQEELEATGRALVLVEKNLAH---LSERFKGsstVLMLEGDPTSDEVLQEAGILRAKGLFAALGTDKDN 170
Cdd:PRK09496  235 MIVGGGNIGYYLAKLLEKEGYSVKLIERDPERaeeLAEELPN---TLVLHGDGTDQELLEEEGIDEADAFIALTNDDEAN 311


                  ....*...
gi 1232302611 171 LFVVLSAR 178
Cdd:PRK09496  312 ILSSLLAK 319
PRK10073 PRK10073
putative glycosyl transferase; Provisional
 12-92 2.64e-06

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 46.96  E-value: 2.64e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  12 PTISVVTATWNAAQHLPGLITSLQGQTDKEFEWVVADGASDDGTLELLRSVTG--LNIVISSQQDFGIYDALNRAIRIAS 89
Cdd:PRK10073    6 PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAEnyPHVRLLHQANAGVSVARNTGLAVAT 85


                  ...
gi 1232302611  90 GDY 92
Cdd:PRK10073   86 GKY 88
PRK10669 PRK10669
putative cation:proton antiport protein; Provisional
 94-209 3.70e-06

putative cation:proton antiport protein; Provisional


Pssm-ID: 182633 [Multi-domain]  Cd Length: 558  Bit Score: 47.02  E-value: 3.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  94 IVCGAGRVGEYIQEELEATGRALVLVEKNLAHLSE-RFKGSSTVLmleGDPTSDEVLQEAGILRAKGLFAALGTDKDNLF 172
Cdd:PRK10669  421 LLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDElRERGIRAVL---GNAANEEIMQLAHLDCARWLLLTIPNGYEAGE 497

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1232302611 173 VVLSARGLNPQLRIVARA--DDEETRpkLMRAGADAVIV 209
Cdd:PRK10669  498 IVASAREKRPDIEIIARAhyDDEVAY--ITERGANQVVM 534
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
 16-96 4.24e-06

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 45.30  E-value: 4.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  16 VVTATWNAAQHLPGLITSLQGQTDKEFE-WVVADGaSDDGTLELLRSVTGL----NIVISSQQDFGIYDALNRAIRIASG 90
Cdd:cd06423     1 IIVPAYNEEAVIERTIESLLALDYPKLEvIVVDDG-STDDTLEILEELAALyirrVLVVRDKENGGKAGALNAGLRHAKG 79


                  ....*.
gi 1232302611  91 DyYIVC 96
Cdd:cd06423    80 D-IVVV 84
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
 16-95 3.18e-05

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 43.43  E-value: 3.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  16 VVTATWNAAQHLPGLITSLQGQT--DKEFEWVVADGASDDGTLELL---RSVTGLNIVISSQQDFGIY---DALNRAIRI 87
Cdd:cd04192     1 VVIAARNEAENLPRLLQSLSALDypKEKFEVILVDDHSTDGTVQILefaAAKPNFQLKILNNSRVSISgkkNALTTAIKA 80


                  ....*...
gi 1232302611  88 ASGDYYIV 95
Cdd:cd04192    81 AKGDWIVT 88
GT2_RfbC_Mx_like cd04184
Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene ...
 12-92 1.39e-04

Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133027 [Multi-domain]  Cd Length: 202  Bit Score: 41.42  E-value: 1.39e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  12 PTISVVTATWNAAQ-HLPGLITSLQGQTDKEFEWVVADGASDD-GTLELLRSVTGLN---IVISSQQDFGIYDALNRAIR 86
Cdd:cd04184     1 PLISIVMPVYNTPEkYLREAIESVRAQTYPNWELCIADDASTDpEVKRVLKKYAAQDpriKVVFREENGGISAATNSALE 80


                  ....*.
gi 1232302611  87 IASGDY 92
Cdd:cd04184    81 LATGEF 86
Beta4Glucosyltransferase cd02511
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of ...
 13-92 1.85e-04

UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.


Pssm-ID: 133005 [Multi-domain]  Cd Length: 229  Bit Score: 41.12  E-value: 1.85e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  13 TISVVTATWNAAQHLPGLITSLQGQTDkefEWVVADGASDDGTLELLRSVtGLNIVissQQDFGIY-DALNRAIRIASGD 91
Cdd:cd02511     1 TLSVVIITKNEERNIERCLESVKWAVD---EIIVVDSGSTDRTVEIAKEY-GAKVY---QRWWDGFgAQRNFALELATND 73


                  .
gi 1232302611  92 Y 92
Cdd:cd02511    74 W 74
PRK03562 PRK03562
glutathione-regulated potassium-efflux system protein KefC; Provisional
 94-207 1.06e-03

glutathione-regulated potassium-efflux system protein KefC; Provisional


Pssm-ID: 235131 [Multi-domain]  Cd Length: 621  Bit Score: 39.59  E-value: 1.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  94 IVCGAGRVGEYIQEELEATGRALVLVEKNLAHLSERFKGSSTVLMleGDPTSDEVLQEAGILRAKGLFAALGTDKDNLFV 173
Cdd:PRK03562  404 IIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFY--GDATRMDLLESAGAAKAEVLINAIDDPQTSLQL 481

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1232302611 174 VLSARGLNPQLRIVARADDEETRPKLMRAGADAV 207
Cdd:PRK03562  482 VELVKEHFPHLQIIARARDVDHYIRLRQAGVEKP 515
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
 16-95 9.10e-03

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 35.97  E-value: 9.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1232302611  16 VVTATWNAAQHLPGLITSLQGQ-TDKEFEWVVADGASDDGTLELLRSVTGLN---IVISSQQDFGIYDALNRAIRIASGD 91
Cdd:cd06442     1 IIIPTYNERENIPELIERLDAAlKGIDYEIIVVDDNSPDGTAEIVRELAKEYprvRLIVRPGKRGLGSAYIEGFKAARGD 80


                  ....
gi 1232302611  92 YYIV 95
Cdd:cd06442    81 VIVV 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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