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Conserved domains on  [gi|1229705240|ref|XP_022114316|]
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dnaJ homolog subfamily B member 6 isoform X1 [Pieris rapae]

Protein Classification

J domain-containing protein( domain architecture ID 13623695)

J domain-containing protein similar to molecular chaperone DnaJ; DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 9.75e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.89  E-value: 9.75e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-138 8.54e-35

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 128.49  E-value: 8.54e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDARGsshhghryqsKNG 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFG----------HAG 68

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1229705240  83 VNGhrhFSFKGFFGDTPFH-RFFERKRRVYDQYGKEGLNSSRGRRSTTDEDYDFGYH 138
Cdd:TIGR02349  69 FNG---GGGGGGGGFNGFDiGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYD 122
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 9.75e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.89  E-value: 9.75e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-105 1.35e-36

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 133.73  E-value: 1.35e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDargssHHGHRYQSKNG 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYD-----QYGHAAFEQGG 78

                          90       100
                  ....*....|....*....|...
gi 1229705240  83 VNGhrhfsfkGFFGDTPFHRFFE 105
Cdd:PRK10767   79 GGG-------GFGGGGGFGDIFG 94
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-78 3.67e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 125.97  E-value: 3.67e-36
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQ 78
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLAT 75
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-138 8.54e-35

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 128.49  E-value: 8.54e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDARGsshhghryqsKNG 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFG----------HAG 68

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1229705240  83 VNGhrhFSFKGFFGDTPFH-RFFERKRRVYDQYGKEGLNSSRGRRSTTDEDYDFGYH 138
Cdd:TIGR02349  69 FNG---GGGGGGGGFNGFDiGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYD 122
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 2.86e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.79  E-value: 2.86e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240    2 VDYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNADEANRKFKEISEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-132 2.11e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 114.50  E-value: 2.11e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNADEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNG 82
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETES 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1229705240  83 VNGHRHFSFKGF---FGDTPFHRFFerkrrvydqyGKEGLNSSRGRRSTTDED 132
Cdd:PRK14282   85 GGGFFEDIFKDFeniFNRDIFDIFF----------GERRTQEEQREYARRGED 127
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.25e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 105.32  E-value: 3.25e-29
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP-EAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-158 1.22e-27

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 110.68  E-value: 1.22e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNpdNADEANRKFKEISEAYEVLSDANKRKVYDargssHHGHryqskNG 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYD-----KYGH-----DG 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240  83 VNGHRHFSFKGFfgdTPFHRFFERKRRvydqyGKEGLNSSRGRRSTTDEDYDFGYH-----SFPFTFRDPEEVFREFFGG 157
Cdd:NF037946   74 VDGEGGFGFDAF---DVFSSFFETINK-----SGAFLDDSVDESVSADDDLDRLFDdskepSFTSGLDEIVQFWEAFIGN 145


                  .
gi 1229705240 158 S 158
Cdd:NF037946  146 P 146
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-128 3.52e-21

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 93.34  E-value: 3.52e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNpdNADEANRKFKEISEAYEVLSDANKRKVYDargssHHGHryqskNG 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYD-----KYGH-----DG 70

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1229705240  83 VNGHRHFSFKGffgdTPFHRFFER--KRRVYDQYGKEGLNSSRGRRST 128
Cdd:TIGR03835  71 VDREDDFDFQA----DVFNSFFEEinKSGEFDNITDDDTPSKKKKKKK 114
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 9.75e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.89  E-value: 9.75e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-105 1.35e-36

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 133.73  E-value: 1.35e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDargssHHGHRYQSKNG 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYD-----QYGHAAFEQGG 78

                          90       100
                  ....*....|....*....|...
gi 1229705240  83 VNGhrhfsfkGFFGDTPFHRFFE 105
Cdd:PRK10767   79 GGG-------GFGGGGGFGDIFG 94
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-78 3.67e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 125.97  E-value: 3.67e-36
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQ 78
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLAT 75
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-138 8.54e-35

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 128.49  E-value: 8.54e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDARGsshhghryqsKNG 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFG----------HAG 68

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1229705240  83 VNGhrhFSFKGFFGDTPFH-RFFERKRRVYDQYGKEGLNSSRGRRSTTDEDYDFGYH 138
Cdd:TIGR02349  69 FNG---GGGGGGGGFNGFDiGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYD 122
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 2.86e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.79  E-value: 2.86e-31
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240    2 VDYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNADEANRKFKEISEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-129 1.97e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 117.18  E-value: 1.97e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDargssHHGHRYQSKNG 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYD-----QFGHAAFSGSG 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1229705240  83 VNGHRHFSFKGFFGdTPFHRFFERKRRVYDQYGK-EGLNSSRGRRSTT 129
Cdd:PRK14291   77 QQQQGQEGFSDFGG-GNIEDILEDVFDIFGFGDIfGRRRATRERRKTY 123
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-112 9.54e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 115.03  E-value: 9.54e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNADEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNG 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNW 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1229705240  83 VNgHRHFS---------FKGFFGDTPFHRFFERKR-RVYD 112
Cdd:PRK14290   84 DN-FTHFSdindifnqiFGGNFGSDFFSGFGNQQStRNID 122
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-132 2.11e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 114.50  E-value: 2.11e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNADEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNG 82
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETES 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1229705240  83 VNGHRHFSFKGF---FGDTPFHRFFerkrrvydqyGKEGLNSSRGRRSTTDED 132
Cdd:PRK14282   85 GGGFFEDIFKDFeniFNRDIFDIFF----------GERRTQEEQREYARRGED 127
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-63 2.70e-29

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 105.85  E-value: 2.70e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNADeANRKFKEISEAYEVLSDANKRK 63
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPK-AEERFKEINEAYELLSDAEKRA 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.25e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 105.32  E-value: 3.25e-29
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP-EAEEKFKEINEAYEVLSD 55
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-132 5.17e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 110.60  E-value: 5.17e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDARGssHHGhryqsKNG 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP-EAEQKFKEAAEAYEVLRDAEKRARYDRFG--HAG-----VNG 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1229705240  83 VNGHRHFS--------FKGFFGDtpfhrFFerkrrvydqyGKEGLNSSRGRRSTTDED 132
Cdd:PRK14301   77 NGGFGGFSsaedifshFSDIFGD-----LF----------GFSGGGSRRGPRPQAGSD 119
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-158 1.22e-27

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 110.68  E-value: 1.22e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNpdNADEANRKFKEISEAYEVLSDANKRKVYDargssHHGHryqskNG 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYD-----KYGH-----DG 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240  83 VNGHRHFSFKGFfgdTPFHRFFERKRRvydqyGKEGLNSSRGRRSTTDEDYDFGYH-----SFPFTFRDPEEVFREFFGG 157
Cdd:NF037946   74 VDGEGGFGFDAF---DVFSSFFETINK-----SGAFLDDSVDESVSADDDLDRLFDdskepSFTSGLDEIVQFWEAFIGN 145


                  .
gi 1229705240 158 S 158
Cdd:NF037946  146 P 146
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-134 1.57e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 109.08  E-value: 1.57e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNaDEANRKFKEISEAYEVLSDANKRKVYDargssHHGHryqskNG 82
Cdd:PRK14294    5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKRGIYD-----QYGH-----EG 73

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1229705240  83 VNGHRHFSFKGF------FGDTpFHRFFERKRrvydqyGKEGLNSSRGRRStTDEDYD 134
Cdd:PRK14294   74 LSGTGFSGFSGFddifssFGDI-FEDFFGFGG------GRRGRSRTAVRAG-ADLRYD 123
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-69 1.84e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 109.37  E-value: 1.84e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDARG 69
Cdd:PRK14278    4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGG 68
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-134 2.20e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 109.12  E-value: 2.20e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNG 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1229705240  83 VN------GHRHFSFKGfFGDTpFHRFFErkrrvyDQYGKEGLNSSRGRRSTTDEDYD 134
Cdd:PRK14277   85 FGqggfggGGFDFDFGG-FGDI-FEDIFG------DFFGTGRRRAETGPQKGADIRYD 134
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-68 5.47e-27

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 100.56  E-value: 5.47e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1229705240   1 MVDYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNADEANRKFKEISEAYEVLSDANKRKVYDAR 68
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDRE 71
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-128 1.85e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 106.82  E-value: 1.85e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNG 82
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGG 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1229705240  83 -VNGHRHFSFKGFFgdTPFHRFFE--RKRRVYDQYGKE---GLNSSRGRRST 128
Cdd:PRK14281   83 pGYGGGGGDFNDIF--SAFNDMFGggARRGGGSPFGFEdvfGGGGRRRRASA 132
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-136 2.26e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 106.09  E-value: 2.26e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYqSKNG 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQY-SAED 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1229705240  83 VNGHRHFsfkGFFGDTpFHRFFerkrrvydqyGKEGLNSSRGRRSTTDEDYDFG 136
Cdd:PRK14298   83 IFRGADF---GGFGDI-FEMFF----------GGGGRRGRMGPRRGSDLRYDLY 122
PRK14295 PRK14295
molecular chaperone DnaJ;
3-127 2.37e-26

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 106.47  E-value: 2.37e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYD-AR---GSShhGHRYQ 78
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYDeARslfGNG--GFRPG 86

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1229705240  79 SKNGVNGHRHFSFKGFFGD-TPFHRFFERKRRVYDQYGkeGLNSSRGRRS 127
Cdd:PRK14295   87 PGGGGGGGFNFDLGDLFGGgAQGGGGAGGGGGLGDVFG--GLFNRGGRRT 134
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-69 1.04e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 104.54  E-value: 1.04e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDARG 69
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYG 67
PRK14297 PRK14297
molecular chaperone DnaJ;
3-151 1.70e-25

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 103.71  E-value: 1.70e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNG 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSG 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1229705240  83 VNGHRHFSFKGFFGDtpfhrfferkrrVYDQYGKEGLNSSRGRRSTTDEDYDFGYhSFPFTFRdpEEVF 151
Cdd:PRK14297   84 GFGGFDFSDMGGFGD------------IFDSFFGGGFGSSSRRRNGPQRGADIEY-TINLTFE--EAVF 137
PRK14289 PRK14289
molecular chaperone DnaJ;
3-103 1.90e-25

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 103.76  E-value: 1.90e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNaDEANRKFKEISEAYEVLSDANKRKVYDARGssHHGhryqsKNG 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKRSRYDQFG--HAG-----VGG 77

                          90       100
                  ....*....|....*....|.
gi 1229705240  83 VNGHRHFSFKGFFGDTPFHRF 103
Cdd:PRK14289   78 AAGGGGFSGEGMSMEDIFSMF 98
PRK14280 PRK14280
molecular chaperone DnaJ;
3-104 1.02e-24

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 101.72  E-value: 1.02e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPD-NADEanrKFKEISEAYEVLSDANKRKVYDARGssHHGHRYQSKN 81
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEeGADE---KFKEISEAYEVLSDDQKRAQYDQFG--HAGPNQGFGG 79

                          90       100
                  ....*....|....*....|...
gi 1229705240  82 GVNGHRHFSFKGFFGDTpFHRFF 104
Cdd:PRK14280   80 GGFGGGDFGGGFGFEDI-FSSFF 101
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-126 1.01e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 98.81  E-value: 1.01e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   1 MVDYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdeANRKFKEISEAYEVLSDANKRKVYDARGSSHHGhryqsk 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKG--AAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGA------ 72

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1229705240  81 nGVNGHRHFSFKGFFGDTPFHRFFerkrrvydqyGKEGLNSSRGRR 126
Cdd:PRK14292   73 -GMPGGDPFGGMGFDPMDIFEQLF----------GGAGFGGGRGRR 107
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-196 2.53e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 97.75  E-value: 2.53e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   4 YYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNaDEANRKFKEISEAYEVLSDANKRKVYDARGsshhghryqsKNGV 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFG----------KAGV 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240  84 NG---------HRHFS-FKGFFGDTpFHRFFErkrrvydqyGKEGLNSSRGRRSTTDEDYDFGYhSFPFTFRDPeEVFRE 153
Cdd:PRK14286   75 NAgaggfgqgaYTDFSdIFGDFGDI-FGDFFG---------GGRGGGSGGGRRSGPQRGSDLRY-NLEVSLEDA-ALGRE 142

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1229705240 154 FFGGSPFSELFADINGHGNHRHGRRSHHPSTSLTSSLFNPFGF 196
Cdd:PRK14286  143 YKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGF 185
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-105 5.91e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 96.82  E-value: 5.91e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDARGSShhghryqsknG 82
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA----------G 73

                          90       100
                  ....*....|....*....|...
gi 1229705240  83 VNGhrhFSFKGFFGDTPFHRFFE 105
Cdd:PRK14283   74 MDG---FSQEDIFNNINFEDIFQ 93
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-96 7.77e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 96.31  E-value: 7.77e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNpdNADEANRKFKEISEAYEVLSDANKRKVYDARGSShhghryqsknG 82
Cdd:PRK14276    5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN--KEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAA----------G 72

                          90
                  ....*....|....
gi 1229705240  83 VNGhrhfSFKGFFG 96
Cdd:PRK14276   73 ANG----GFGGGAG 82
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-139 1.33e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 95.83  E-value: 1.33e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNaDEANRKFKEISEAYEVLSDANKRKVYDARGSShhghRYQSKNG 82
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDDNKRAQYDRFGHT----AFEGGGG 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1229705240  83 VNGhrhFSfKGFFGdtpFHRFFERKRRVYDQY--GKEGLNSSRGRRSTTD---------EDYDFGYHS 139
Cdd:PRK14285   79 FEG---FS-GGFSG---FSDIFEDFGDIFDSFftGNRGQDKNRKHEKGQDltyqieislEDAYLGYKN 139
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-152 1.59e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 94.24  E-value: 1.59e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnaDEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNG 82
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1229705240  83 vNGHRHFSFKGF-FGDtpFHRFFERKRRVYDQYGKEG-LNSSRGRRSTTDEDYDfgyHSFPFTFrdpEEVFR 152
Cdd:PRK14299   83 -GPPGGGDFSGFnVGD--FSDFFQQLFGGRGGFGGFGdLFGSVGRRARKGRDLE---AELPLTL---EEAYR 145
PRK14279 PRK14279
molecular chaperone DnaJ;
3-66 1.24e-21

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 93.26  E-value: 1.24e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdEANRKFKEISEAYEVLSDANKRKVYD 66
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14293 PRK14293
molecular chaperone DnaJ;
1-104 3.14e-21

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 91.98  E-value: 3.14e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   1 MVDYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNAdeANRKFKEISEAYEVLSDANKRKVYDARGSShhghryqSK 80
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPG--AEDRFKEINRAYEVLSDPETRARYDQFGEA-------GV 72

                          90       100
                  ....*....|....*....|....
gi 1229705240  81 NGVNGHRHFSFKGFFGDTpFHRFF 104
Cdd:PRK14293   73 SGAAGFPDMGDMGGFADI-FETFF 95
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-128 3.52e-21

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 93.34  E-value: 3.52e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNpdNADEANRKFKEISEAYEVLSDANKRKVYDargssHHGHryqskNG 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYD-----KYGH-----DG 70

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1229705240  83 VNGHRHFSFKGffgdTPFHRFFER--KRRVYDQYGKEGLNSSRGRRST 128
Cdd:TIGR03835  71 VDREDDFDFQA----DVFNSFFEEinKSGEFDNITDDDTPSKKKKKKK 114
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-69 1.15e-19

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 87.95  E-value: 1.15e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1229705240   4 YYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDnadeaNRKFKEISEAYEVLSDANKRKVYDARG 69
Cdd:PTZ00037   30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYG 90
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-109 1.42e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 87.38  E-value: 1.42e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNpdNADEANRKFKEISEAYEVLSDANKRKVYDARGssHHGHRYQSKNG 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFG--HDAFQNQQSRG 79

                          90       100       110
                  ....*....|....*....|....*....|
gi 1229705240  83 VNGHR---HFSFKGFFGDTpFHRFFERKRR 109
Cdd:PRK14300   80 GGGNHggfHPDINDIFGDF-FSDFMGGSRR 108
PRK10266 PRK10266
curved DNA-binding protein;
3-112 2.44e-19

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 85.64  E-value: 2.44e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPD--KNPDnadeANRKFKEISEAYEVLSDANKRKVYDA----RGSSHHGHR 76
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQlwqhRNDPQFNRQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1229705240  77 YQSKNGVNGHRH-FS--FKGFFGDTPFHRFFERKRRVYD 112
Cdd:PRK10266   81 FQHGDGQSFNAEdFDdiFSSIFGQHARQSRQRPAARGHD 119
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-132 1.16e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 81.92  E-value: 1.16e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNadEANRKFKEISEAYEVLSDANKRKVYDARG-SSHHGHRYQSKN 81
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSP--DAHDKMVEINEAADVLLDKDKRKQYDQFGhAAFDGSSGFSSN 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1229705240  82 GVNGHRHFSFKGFFGDTPFHRFFErkrrvyDQYGKeglNSSRGRRSTTDED 132
Cdd:PRK14296   83 FGDFEDLFSNMGSSGFSSFTNIFS------DFFGS---NKSDYQRSTKGQS 124
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-96 3.55e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 77.36  E-value: 3.55e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNpdNADEANRKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYqSKNG 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-GGGG 81

                          90
                  ....*....|....*.
gi 1229705240  83 VNGHRHFS--FKGFFG 96
Cdd:PRK14287   82 AGDFGGFSdiFDMFFG 97
PRK14288 PRK14288
molecular chaperone DnaJ;
2-133 7.67e-15

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 73.57  E-value: 7.67e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   2 VDYYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNaDEANRKFKEISEAYEVLSDANKRKVYDARGsshhghryqsKN 81
Cdd:PRK14288    3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDEKKRALYDRYG----------KK 71

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1229705240  82 GVN--GHRHFSFKGFFGDtpFHRFFErkrrvyDQYGKEGLNSSRgRRSTTDEDY 133
Cdd:PRK14288   72 GLNqaGASQSDFSDFFED--LGSFFE------DAFGFGARGSKR-QKSSIAPDY 116
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 1.46e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 67.13  E-value: 1.46e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1229705240   1 MVDYYRILGVTRTSSDAEIKKAYRKLALKWHPDK--NPDNADE---ANRKFKEISEAYEVLSDANKRKV 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaAGLPEEEqrlALQKAAAINEAYETLKDPRGIDL 71
djlA PRK09430
co-chaperone DjlA;
3-63 6.00e-11

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 61.37  E-value: 6.00e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1229705240   3 DYYRILGVTRTSSDAEIKKAYRKLALKWHPDK------NPDNADEANRKFKEISEAYEVLSDANKRK 63
Cdd:PRK09430  201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELIKKQKGFK 267
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-84 4.11e-10

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 60.19  E-value: 4.11e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240    4 YYRILGVTRTSSDAEIKKAYRKLALKWHPDKNPDNadEANRKFKEISEAYEVLSDANKRKVYDARGsshhghrYQSKNGV 83
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFG-------YDGIKGV 645


                   .
gi 1229705240   84 N 84
Cdd:PTZ00341   646 N 646
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-67 8.95e-08

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 52.73  E-value: 8.95e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   2 VDYYRILGVT--RTSSDAE-IKKAYRKLALKWHPDKNPDNADEANRK-FKEISEAYEVLSDANKRKVYDA 67
Cdd:COG5269    43 VDLYALLGLSkyRTKAIPPqILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYDS 112
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 3.53e-04

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 40.25  E-value: 3.53e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240   1 MVDYYRILGVTRTSS-DAEI-KKAYRKLALKWHPDKnPDNADEANRKF---KEISEAYEVLSDANKRKVY 65
Cdd:PRK01356    1 MQNYFQLLGLPQEYNiDLKIlEKQYFAMQVKYHPDK-AKTLQEKEQNLiiaSELNNAYSTLKDALKRAEY 69
RPT pfam13446
A repeated domain in UCH-protein; This is a repeated domain found in de-ubiquitinating ...
 5-52 2.09e-03

A repeated domain in UCH-protein; This is a repeated domain found in de-ubiquitinating proteins. It's exact function is not known although it is likely to be involved in the binding of the Ubps in the complex with Rsp5 and Rup1.


Pssm-ID: 463882  Cd Length: 59  Bit Score: 35.55  E-value: 2.09e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1229705240   5 YRILGVTRTSSDAEIKKAYRklaLKWhpDKNPDNADEANRKFKEISEA 52
Cdd:pfam13446   6 YKLLGIDEDTDDDFIITAYQ---VKV--EDAPSQKDLLRRALKVIAEE 48
PHA03102 PHA03102
Small T antigen; Reviewed
 19-104 4.64e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 36.96  E-value: 4.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1229705240  19 IKKAYRKLALKWHPDKNPDNAdeanrKFKEISEAYEVLSDANKRKVYDARGSSHHGHRYQSKNGvnghrhfSFKGFFGDT 98
Cdd:PHA03102   24 MRKAYLRKCLEFHPDKGGDEE-----KMKELNTLYKKFRESVKSLRDLDGEEDSSSEEEDVPSG-------YVGATFGDR 91


                  ....*.
gi 1229705240  99 PFHRFF 104
Cdd:PHA03102   92 VNALYC 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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