NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1227918504|ref|XP_021894995|]
View 

BES1/BZR1 homolog protein 4 isoform X2 [Carica papaya]

Protein Classification

BES1_N domain-containing protein( domain architecture ID 10529428)

BES1_N domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
BES1_N pfam05687
BES1/BZR1 plant transcription factor, N-terminal; This family consists of the N terminal ...
 31-104 6.08e-45

BES1/BZR1 plant transcription factor, N-terminal; This family consists of the N terminal regions of several plant transcription factors. It is classified as BES1/BZR1, a plant-specific transcription factor that cooperates with transcription factors such as BIM1 to regulate brassinosteroid-induced genes.


:

Pssm-ID: 461715 [Multi-domain]  Cd Length: 143  Bit Score: 149.89  E-value: 6.08e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227918504  31 FAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKP--VERMDIVAGSATASPCSSYHP--------SPC 100
Cdd:pfam05687  29 LAGLRAYGNYNLPKHCDNNEVLKALCREAGWTVEPDGTTYRKGCKPppSERSDVGGFSARASPCSSYQPsllssafpSPI 108


                  ....
gi 1227918504 101 ASYN 104
Cdd:pfam05687 109 ESYN 112
 
Name Accession Description Interval E-value
BES1_N pfam05687
BES1/BZR1 plant transcription factor, N-terminal; This family consists of the N terminal ...
 31-104 6.08e-45

BES1/BZR1 plant transcription factor, N-terminal; This family consists of the N terminal regions of several plant transcription factors. It is classified as BES1/BZR1, a plant-specific transcription factor that cooperates with transcription factors such as BIM1 to regulate brassinosteroid-induced genes.


Pssm-ID: 461715 [Multi-domain]  Cd Length: 143  Bit Score: 149.89  E-value: 6.08e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227918504  31 FAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKP--VERMDIVAGSATASPCSSYHP--------SPC 100
Cdd:pfam05687  29 LAGLRAYGNYNLPKHCDNNEVLKALCREAGWTVEPDGTTYRKGCKPppSERSDVGGFSARASPCSSYQPsllssafpSPI 108


                  ....
gi 1227918504 101 ASYN 104
Cdd:pfam05687 109 ESYN 112
PLN02705 PLN02705
beta-amylase
 31-101 8.32e-13

beta-amylase


Pssm-ID: 178307 [Multi-domain]  Cd Length: 681  Bit Score: 68.81  E-value: 8.32e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1227918504  31 FAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPvERMDIVAGSATASPCSSYHPSPCA 101
Cdd:PLN02705  103 LAGLRQYGNFPLPARADMNDVLAALAREAGWTVEADGTTYRQSPQP-SHVGSFPVRSVESPLSSSTLKNCA 172
 
Name Accession Description Interval E-value
BES1_N pfam05687
BES1/BZR1 plant transcription factor, N-terminal; This family consists of the N terminal ...
 31-104 6.08e-45

BES1/BZR1 plant transcription factor, N-terminal; This family consists of the N terminal regions of several plant transcription factors. It is classified as BES1/BZR1, a plant-specific transcription factor that cooperates with transcription factors such as BIM1 to regulate brassinosteroid-induced genes.


Pssm-ID: 461715 [Multi-domain]  Cd Length: 143  Bit Score: 149.89  E-value: 6.08e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227918504  31 FAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKP--VERMDIVAGSATASPCSSYHP--------SPC 100
Cdd:pfam05687  29 LAGLRAYGNYNLPKHCDNNEVLKALCREAGWTVEPDGTTYRKGCKPppSERSDVGGFSARASPCSSYQPsllssafpSPI 108


                  ....
gi 1227918504 101 ASYN 104
Cdd:pfam05687 109 ESYN 112
PLN02705 PLN02705
beta-amylase
 31-101 8.32e-13

beta-amylase


Pssm-ID: 178307 [Multi-domain]  Cd Length: 681  Bit Score: 68.81  E-value: 8.32e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1227918504  31 FAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPvERMDIVAGSATASPCSSYHPSPCA 101
Cdd:PLN02705  103 LAGLRQYGNFPLPARADMNDVLAALAREAGWTVEADGTTYRQSPQP-SHVGSFPVRSVESPLSSSTLKNCA 172
PLN02905 PLN02905
beta-amylase
 31-101 5.48e-10

beta-amylase


Pssm-ID: 178493 [Multi-domain]  Cd Length: 702  Bit Score: 60.39  E-value: 5.48e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1227918504  31 FAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTY---RKGCKPVERMDIVAGSATASPCSSYHPSPCA 101
Cdd:PLN02905  105 LAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFpsrSQGTRPAGGTSAVAATSSSSHLVSQQTPPPS 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH