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Conserved domains on  [gi|1227111156|gb|ASQ41543|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Acanthacris ruficornis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.79e-43

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 136.83  E-value: 3.79e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   3 ILSTSVFISFIIPMIVMILATMLSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1227111156  83 TSNIMIWTMSTMFFILVLLGGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.79e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 136.83  E-value: 3.79e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   3 ILSTSVFISFIIPMIVMILATMLSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1227111156  83 TSNIMIWTMSTMFFILVLLGGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.28e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.28e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156  19 MILATMLSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKtSNIMIWTMSTMFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1227111156  99 VLLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.88e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.10  E-value: 1.88e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   8 VFISFIIPMIVMILATMLSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 1227111156  88 IWtMSTMFFILVLLGGLYHEWNQGALQW 115
Cdd:COG0838    91 GL-IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.79e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 136.83  E-value: 3.79e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   3 ILSTSVFISFIIPMIVMILATMLSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1227111156  83 TSNIMIWTMSTMFFILVLLGGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 4.64e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 131.90  E-value: 4.64e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1227111156  81 FKTSNIMIWTMSTMFFILVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 2.75e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 124.72  E-value: 2.75e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1227111156  81 FKTSNIMIWTMSTMFFILVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 1.11e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 110.72  E-value: 1.11e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1227111156  81 FKTSNIMIWTMSTMFFILVLLGGLYHEWNQGALQWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-117 3.34e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 101.53  E-value: 3.34e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSKkMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1227111156  81 FKTSNIMIwTMSTMFFILVLLG-GLYHEWNQGALQWAE 117
Cdd:MTH00136   80 DQLPSPLL-TFFWATAVLILLTlGLIYEWLQGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-117 7.91e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 100.78  E-value: 7.91e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSKKmindrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00106    4 MLTLLTNTLLASLLVLIAFWLPQLNIYS-----EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1227111156  81 FKTSNIMIWTMSTMFFILVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00106   79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 4-116 2.54e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 96.87  E-value: 2.54e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   4 LSTSVFISFIIPMIVMILATMLSKkMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIvIIFKT 83
Cdd:MTH00113    3 LISMLTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPL-PWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1227111156  84 SNIMIWTMSTMFFILVLLG-GLYHEWNQGALQWA 116
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTlGLIYEWLQGGLEWA 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.28e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.28e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156  19 MILATMLSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKtSNIMIWTMSTMFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1227111156  99 VLLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-117 4.67e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 93.52  E-value: 4.67e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSkkminDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPI--- 77
Cdd:MTH00069    3 MLMLLISTILSLILITISFWLPLNNP-----DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwa 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1227111156  78 VIIFKTSNIMIWtmSTMFFILVLLGGLYhEWNQGALQWAE 117
Cdd:MTH00069   78 SQLNTPTNTLFW--STLILILLTLGLIY-EWIQGGLEWAE 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 5.55e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 93.51  E-value: 5.55e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSKKMInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1227111156  81 FKTSNIMIWTMSTMFFILVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 1.04e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 89.96  E-value: 1.04e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILAtMLSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1227111156  81 FKTSNimIWTMSTMFFILVLLGGLYHEWNQGALQW 115
Cdd:MTH00203   80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.88e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.10  E-value: 1.88e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   8 VFISFIIPMIVMILATMLSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 1227111156  88 IWtMSTMFFILVLLGGLYHEWNQGALQW 115
Cdd:COG0838    91 GL-IEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 10-116 6.72e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 83.37  E-value: 6.72e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156  10 ISFIIPMIVMILATMLSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSNiMIW 89
Cdd:PRK06602   17 VAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-WLG 94

                          90       100
                  ....*....|....*....|....*..
gi 1227111156  90 TMSTMFFILVLLGGLYHEWNQGALQWA 116
Cdd:PRK06602   95 FVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 9-115 6.71e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 75.48  E-value: 6.71e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   9 FISFIIPMIVMILATMLSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFK-TSNIM 87
Cdd:MTH00018    8 IFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNqIAPFG 86

                          90       100
                  ....*....|....*....|....*...
gi 1227111156  88 IWTMSTMFFILVLlgGLYHEWNQGALQW 115
Cdd:MTH00018   87 FWTMVGFLFILTL--GLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 10-115 3.09e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 71.28  E-value: 3.09e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156  10 ISFIIPMIVMILATMLSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSNIM-I 88
Cdd:MTH00055   14 FSIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgF 92

                          90       100
                  ....*....|....*....|....*..
gi 1227111156  89 WTMSTMFFILVLlgGLYHEWNQGALQW 115
Cdd:MTH00055   93 WVMYLFLIILTI--GLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 6.19e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 65.72  E-value: 6.19e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSNIM-IWTMSTmfFILVLLGGLYHEWNQ 110
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIK 117


                  ....*
gi 1227111156 111 GALQW 115
Cdd:MTH00030  118 GGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-115 4.58e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 50.44  E-value: 4.58e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFIsfiipmIVMILATMLSKKMIN---DREKSSPFECGFDPKSSARMpFSLRFFLIAVIFLIFDVEIALILPI 77
Cdd:PRK08489   16 LLVLTFVAFF------LTTRLARFISRKLAQkntEKLKLAIYECGPEPVKQPNR-ISSHFYIMALLFILFDVEIVFMFPW 88

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1227111156  78 VIIFKTsnIMIWTMSTMF-FILVLLGGLYHEWNQGALQW 115
Cdd:PRK08489   89 AVDFKL--LGLFGLIEMLlFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-115 4.71e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.13  E-value: 4.71e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   2 LILSTSVFISFIIPMIVMILATMLSKKMINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIF 81
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAY 88

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1227111156  82 KtsNIMIWTMSTMF-FILVLLGGLYHEWNQGALQW 115
Cdd:PRK07756   89 D--KLGLFALIEMLiFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 5.06e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 45.05  E-value: 5.06e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156  19 MILATMLSKKMINdREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDVEIALILPIVIIFKTSNIMIWTMSTMFF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFM 100

                          90
                  ....*....|....*....
gi 1227111156  97 ILVLLGGLYhEWNQGALQW 115
Cdd:PRK07928  101 LTVFVAYAY-VWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 2.70e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.57  E-value: 2.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATMLSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1227111156  81 FKTSNIMIWTMstMFFIlvlLGGLYHEWNQGALQW 115
Cdd:MTH00092   80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-115 5.06e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.80  E-value: 5.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156   1 MLILSTSVFISFIIPMIVMILATML--SKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIV 78
Cdd:MTH00060    1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1227111156  79 ---IIFKTsnimiwTMSTMFFILVLLGGLYHEWNQGALQW 115
Cdd:MTH00060   81 fqgLLFYN------FWYYYFFLLLLFLGFVVELFSGYVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 1.52e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 35.94  E-value: 1.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111156  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIFKTSNIMIWtMSTMFFILVLLGGLYHEWNQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 1227111156 112 ALQW 115
Cdd:PRK06432  139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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