NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1227111098|gb|ASQ41514|]
View 

NADH dehydrogenase subunit 1 (mitochondrion) [Schistocerca lineata]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 8.44e-152

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 427.65  E-value: 8.44e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 165 SFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227111098 245 ALIFLGGDFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 8.44e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 427.65  E-value: 8.44e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 165 SFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227111098 245 ALIFLGGDFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.99e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.29  E-value: 2.99e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  13 LLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNLMISLAVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  93 VIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMFD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 171 FMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLALIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1227111098 251 G------DFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 1.81e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.77  E-value: 1.81e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   4 DLFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  84 NLMISLAVWVIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 162 LIGSFNMFDFMNYQ-LYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 241 SMLLALIFLGG--------DFYS----FMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKI 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1227111098 309 LLI 311
Cdd:COG1005   326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 8.44e-152

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 427.65  E-value: 8.44e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 165 SFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227111098 245 ALIFLGGDFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-308 1.23e-130

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 373.99  E-value: 1.23e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   7 MFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNLM 86
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  87 ISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 167 NMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLAL 246
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1227111098 247 IFLGGDFY--SFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00225  242 LFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-306 5.02e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 344.55  E-value: 5.02e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   6 FMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  86 MISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 166 FNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLA 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227111098 246 LIFLGGDF-----YSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-312 3.13e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 310.01  E-value: 3.13e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 165 SFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227111098 245 ALIFLGGDFYSFM-------FFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILLIS 312
Cdd:MTH00071  244 TILFLGSTYNHLQpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-313 6.83e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 309.25  E-value: 6.83e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   7 MFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  87 ISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 167 NMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLAL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1227111098 247 IFLGG-------DFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILLISF 313
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-308 6.84e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 306.82  E-value: 6.84e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 165 SFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1227111098 245 ALIFLGGDFYSF---MFFIKLA----LMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00111  244 TILFLNPSTLNLppeLFTINLMtktlLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 9-306 2.75e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 304.53  E-value: 2.75e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   9 ILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNLMIS 88
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  89 LAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNM 168
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 169 FDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLALIF 248
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1227111098 249 LGGDFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 7.26e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 303.59  E-value: 7.26e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 165 SFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227111098 245 ALIFLGGDfYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-310 1.62e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 295.75  E-value: 1.62e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   1 MLYDLFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  81 PVFNLMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 161 ILIGSFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227111098 241 SMLLALIFLGGDFYSFM-------FFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00134  241 NTLSAILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 6.36e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 291.49  E-value: 6.36e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   3 YDLFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPV 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  83 FNLMISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 163 IGSFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227111098 243 LLALIFLGGDFYSFMFF--------IKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILL 310
Cdd:MTH00040  241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
13-302 2.99e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.29  E-value: 2.99e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  13 LLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNLMISLAVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  93 VIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMFD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 171 FMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLALIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1227111098 251 G------DFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 3.85e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 273.97  E-value: 3.85e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   8 FILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  88 SLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 168 MFDFMNYQlYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLALI 247
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1227111098 248 FLGGDFYSF----MFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKILLI 311
Cdd:MTH00010  244 FTSFIPSIFisdlMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 1.81e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.77  E-value: 1.81e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   4 DLFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  84 NLMISLAVWVIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 162 LIGSFNMFDFMNYQ-LYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 241 SMLLALIFLGG--------DFYS----FMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFFIFFVGLKI 308
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1227111098 309 LLI 311
Cdd:COG1005   326 LLF 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-308 1.38e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 257.73  E-value: 1.38e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLT--YMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 163 IGSFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227111098 243 LLALIFLGGDFYSF----------MFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00054  241 FGVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 2.28e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 256.97  E-value: 2.28e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   1 MLYDLFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  81 PVFNLMISLAVWVIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 159 LIILIGSFNMFDFMNYQL-YCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227111098 238 VFMSMLLALIFLGG--------DFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGL 306
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 6.30e-84

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 255.89  E-value: 6.30e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   5 LFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  85 LMISLAVWVIFPYLTY--MCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 163 IGSFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227111098 243 LLALIFLGG----------DFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-308 2.67e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 219.12  E-value: 2.67e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   2 LYDLFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  82 VFNLMISLAVWVIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00029   83 IISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 160 IILIGSFNMFDFMNYQLYCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVF 239
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 240 MSMLLALIFLGG-----------------------DFYSFMFFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLS 296
Cdd:MTH00029  243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                         330
                  ....*....|..
gi 1227111098 297 LNFFIFFVGLKI 308
Cdd:MTH00029  323 LGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 1.88e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 199.35  E-value: 1.88e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  11 NFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNLMISLA 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  91 VWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMFD 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 171 FMNYqlycWFIIISFPLalacFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLALIFLg 250
Cdd:MTH00090  161 SFSL----SLFVIYLPF----LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1227111098 251 gDFYSFMFFIKLALMsfgfIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFVGLKI 308
Cdd:MTH00090  232 -KFSFLMLFLIFSLL----IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-304 2.52e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 168.56  E-value: 2.52e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   6 FMFILNFLLLVICVLIsVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSPVFNL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  86 MISLAVWVIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 166 FNMFDFMnyqLYCWFIIISFPLALACFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00058  161 YSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 245 ALIFLGGDFYSFMFFIKLALmsfgFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:MTH00058  238 SVLFFGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-297 5.12e-32

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 121.98  E-value: 5.12e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   2 LYDLFMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYLLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  82 VFNLM-ISLAVWVI-FPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:CHL00032  103 SIAVIsILLSYLVIpFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 160 IILIGSFNMFDFMNYQ-------LYCWFIIISFplaLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLA 232
Cdd:CHL00032  183 SLLSNSLSTVDIVEAQskygfwgWNLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVA 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 233 EYTSIVFMSMLLALIFLGG-----------DFYS--------------FMFFIKLALMSFGFIWVRGTLPRFRYDKLMYL 287
Cdd:CHL00032  260 SYLNLLVSSLFVTVLYLGGwnlsipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNL 339

                         330
                  ....*....|
gi 1227111098 288 AWKSFLPLSL 297
Cdd:CHL00032  340 GWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 1.43e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 106.04  E-value: 1.43e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098   6 FMFILNFLLLVICVLISVAFLTLLERKVLGYIQIRKGPnkvgfvGIPQPFSDAIKLICKEQPIPIMSNyLLYYFSPVFNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098  86 MISLAVWVIFPYLTYMCSFSYG--FLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 164 GSFNMFDFMNYQL---YCWFIIISFPLALACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227111098 241 SMLLALIFLGGDFYSFM------FFIKLALMSFGFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFV 304
Cdd:COG0650   234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH