|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 689.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 12 IKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 92 FICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 172 DNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIMLCLINPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 252 GDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQILFWIMVI 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1227110990 332 VVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
24-365 |
1.69e-123 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 361.80 E-value: 1.69e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 24 APTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMFFICIYLHVGRGI 103
Cdd:COG1290 32 FPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 104 YYSSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFT 181
Cdd:COG1290 112 FYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFA 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 182 FH-FVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEK----IPFHPYFTFKDSITFVLmtsMLIMLCLINPYL-LGDPD 255
Cdd:COG1290 192 LHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV---FLGVFALLAFFFpINPPP 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 256 NFVPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQILFWIMVIVV 333
Cdd:COG1290 269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348
|
330 340 350
....*....|....*....|....*....|..
gi 1227110990 334 CLLTWIGKWPveEPYIMTGQILTIIYFTYFLI 365
Cdd:COG1290 349 IVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.44e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 259.99 E-value: 2.44e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 10 PLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 90 MFFICIYLHVGRGIYYSSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1227110990 168 GFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
1.62e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 239.59 E-value: 1.62e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 19 LVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 99 VGRGIYYSSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1227110990 177 NRFFTFHFVLPFMIAAMAAIHLFFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
238-314 |
2.39e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.57 E-value: 2.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 238 SMLIMLCLINPYLLGDPdnfvpANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF---YNK--TP 312
Cdd:TIGR01156 49 ACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFienVNKfqNP 123
|
..
gi 1227110990 313 FR 314
Cdd:TIGR01156 124 FR 125
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 689.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 12 IKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 92 FICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 172 DNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIMLCLINPYLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 252 GDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQILFWIMVI 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1227110990 332 VVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 620.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 1 MNKPLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWII 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSML 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 241 IMLCLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110990 321 MNQILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLINVHVANAWDKLI 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 606.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 5 LRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 85 ANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 165 VWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIMLC 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 245 LINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1227110990 325 LFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 605.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 1 MNKPLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWII 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSML 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 241 IMLCLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1227110990 321 MNQILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 600.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 5 LRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 85 ANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 165 VWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIMLC 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 245 LINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1227110990 325 LFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 594.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 1 MNKPLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWII 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSML 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 241 IMLCLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1227110990 321 MNQILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLINVHVANAWD-KLIK 378
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEnKLLK 379
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 592.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 4 PLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTL 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 84 HANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 164 WVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIML 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 244 CLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1227110990 324 ILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 590.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 1 MNKPLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWII 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSML 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 241 IMLCLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1227110990 321 MNQILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLINVHVANAWDKLIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 544.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 4 PLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTL 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 84 HANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 164 WVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIML 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 244 CLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1227110990 324 ILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 520.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 1 MNKPLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWII 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSML 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 241 IMLCLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1227110990 321 MNQILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLINVHVANAWDKLIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-365 |
2.26e-177 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 498.07 E-value: 2.26e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 4 PLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 84 HANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 164 WVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIML 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 244 CLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1227110990 324 ILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-365 |
1.77e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 485.75 E-value: 1.77e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 1 MNKPLRLSHPLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWII 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 81 RTLHANGASMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSML 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 241 IMLCLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1227110990 321 MNQILFWIMVIVVCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-367 |
2.41e-132 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 383.90 E-value: 2.41e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 17 NSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMFFICIY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 97 LHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 177 NRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIMLClINPY---LLGD 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-IEPRietLLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 254 PDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQILFWIMVIVV 333
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350
....*....|....*....|....*....|....*
gi 1227110990 334 CLLTWIGKWPV-EEPYIMTGQILTIIYFTYFLINV 367
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLV 366
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
1.42e-126 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 368.11 E-value: 1.42e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 13 KIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 93 ICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 173 NATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTsMLIMLCLINPYLLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 253 DPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNktpFRGIQFYPMNQILFWIMVIV 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 1227110990 333 VCLLTWIGKWPVEEPYIMTGQILTIIYFTYFLI 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
24-365 |
1.69e-123 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 361.80 E-value: 1.69e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 24 APTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMFFICIYLHVGRGI 103
Cdd:COG1290 32 FPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 104 YYSSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFT 181
Cdd:COG1290 112 FYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFA 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 182 FH-FVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEK----IPFHPYFTFKDSITFVLmtsMLIMLCLINPYL-LGDPD 255
Cdd:COG1290 192 LHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV---FLGVFALLAFFFpINPPP 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 256 NFVPANPLVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQILFWIMVIVV 333
Cdd:COG1290 269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348
|
330 340 350
....*....|....*....|....*....|..
gi 1227110990 334 CLLTWIGKWPveEPYIMTGQILTIIYFTYFLI 365
Cdd:COG1290 349 IVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.44e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 259.99 E-value: 2.44e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 10 PLIKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 90 MFFICIYLHVGRGIYYSSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1227110990 168 GFAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-358 |
2.44e-82 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 255.29 E-value: 2.44e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 11 LIKIINNSLVDLhaPTNIS--FWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGA 88
Cdd:MTH00046 1 MISLIRRNLIDL--PTNYSlnYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 89 SMFFICIYLHVGRGIYYSSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 168
Cdd:MTH00046 79 NVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 169 FAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGL-NGDIEKIPFHPYFTFKDSITFVLMTSMLIMLCLIN 247
Cdd:MTH00046 159 FSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 248 PYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIaLFLSISILMILPFYNKTPFRGIqfypMNQILFW 327
Cdd:MTH00046 239 PDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFW 313
|
330 340 350
....*....|....*....|....*....|.
gi 1227110990 328 IMVIVVCLLTWIGKWPVEEPYIMTGQILTII 358
Cdd:MTH00046 314 LIVSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
1.62e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 239.59 E-value: 1.62e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 19 LVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 99 VGRGIYYSSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1227110990 177 NRFFTFHFVLPFMIAAMAAIHLFFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
5.05e-48 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 159.73 E-value: 5.05e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 208 NPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIMLCLINPYLLGDPDNFVPANPLVTPIHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110990 288 KLGGVIALFLSISILMILPFYNKTPFRGiQFYPMNQILFWIMVIVVCLLTWIGKWPVEEPYIMTGQI 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
2.13e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 153.55 E-value: 2.13e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 89 SMFFICIYLHVGRGIYYSSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 167 GGFAVDNATLNRFFTFHF-VLPFMIAAMAAIHLFFLHQTGSNNPLGLNGDIEKIPFHPYFTFKDSITFVLMTSMLIMLCL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1227110990 246 INPYLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.20e-42 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 143.39 E-value: 2.20e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 259 PANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPMNQILFWIMVIVVCLLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1227110990 339 IGKWPVEEPYIMTGQILTIIY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
29-210 |
1.38e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 129.83 E-value: 1.38e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 29 SFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMFFICIYLHVGRGIYYSSY 108
Cdd:PRK03735 39 AFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGY 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 109 MYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFH-FV 185
Cdd:PRK03735 119 KKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFF 198
|
170 180
....*....|....*....|....*
gi 1227110990 186 LPFMIAAMAAIHLFFLHQTGSNNPL 210
Cdd:PRK03735 199 LPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
12-210 |
7.27e-29 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 111.74 E-value: 7.27e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 12 IKIINNSLVDLHAPTNISFWWNFGSMLGLCLVIQIVTGLFLAMHYTSNIEMAFSSVVHICRDVNNGWIIRTLHANGASMF 91
Cdd:CHL00070 14 IQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMM 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 92 FICIYLHVGRgIYYSSYMYMH---TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 168
Cdd:CHL00070 94 VLMMILHVFR-VYLTGGFKKPrelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS 172
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1227110990 169 FAVDNATLNRFFTFH-FVLPFMIAAMAAIHLFFLHQTGSNNPL 210
Cdd:CHL00070 173 VSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
238-346 |
1.38e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 59.42 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 238 SMLIMLCLINPYLLGDPdnfvpANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYN-----KTP 312
Cdd:COG5679 50 ALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIEnvnkfQNP 124
|
90 100 110
....*....|....*....|....*....|....
gi 1227110990 313 FRgiqfYPMNQILFWIMVIVVCLLTWIGKWPVEE 346
Cdd:COG5679 125 FR----RPVATAVFLFGTLVTLWLGIGAALPIDK 154
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
240-314 |
3.34e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 58.09 E-value: 3.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 240 LIMLCLINPYLLGDPdnfvpANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF---YNK--TPFR 314
Cdd:CHL00058 51 NVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlenVNKfqNPFR 125
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
238-314 |
2.39e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.57 E-value: 2.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110990 238 SMLIMLCLINPYLLGDPdnfvpANPLVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF---YNK--TP 312
Cdd:TIGR01156 49 ACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFienVNKfqNP 123
|
..
gi 1227110990 313 FR 314
Cdd:TIGR01156 124 FR 125
|
|
|