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Conserved domains on  [gi|1227110684|gb|ASQ41307|]
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ATP synthase F0 subunit 6, partial (mitochondrion) [Schistocerca nitens caribbeana]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 2-212 5.16e-96

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 278.59  E-value: 5.16e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   2 FNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKsFNGTTFIFISIFIMMLFNNFMGL*FPYIF 81
Cdd:MTH00157   15 FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFILFNNFLGL-FPYIF 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  82 TSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLT 161
Cdd:MTH00157   93 TSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLT 172

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1227110684 162 LLGNTGPSMAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 212
Cdd:MTH00157  173 LLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 2-212 5.16e-96

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 278.59  E-value: 5.16e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   2 FNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKsFNGTTFIFISIFIMMLFNNFMGL*FPYIF 81
Cdd:MTH00157   15 FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFILFNNFLGL-FPYIF 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  82 TSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLT 161
Cdd:MTH00157   93 TSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLT 172

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1227110684 162 LLGNTGPSMAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 212
Cdd:MTH00157  173 LLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 1-212 2.33e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 145.04  E-value: 2.33e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   1 IFNLSLNWTSTFLGLLLIPSMF----WLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFIMMLFNNFMGL* 76
Cdd:TIGR01131  12 LFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFLFILISNLLGL- 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  77 FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAG 156
Cdd:TIGR01131  90 IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAG 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110684 157 HLLLTLLGNTGPS-MAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 212
Cdd:TIGR01131 170 HLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 59-209 5.37e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 131.37  E-value: 5.37e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  59 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISN 138
Cdd:cd00310     7 LLGTLFLFILFSNLLGL-IPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISE 85

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1227110684 139 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSS 209
Cdd:cd00310    86 LIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
24-209 2.29e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 97.95  E-value: 2.29e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  24 LTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFISIFIMMLFNNFMGL--*FPYIFTSTSHLALTFAIALPMWLSF 101
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLipKSPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684 102 MLFGWINH-TNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIF 180
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1227110684 181 ---GQMLLLILESAVAMIQAYVFSILSTLYSS 209
Cdd:pfam00119 185 pplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 62-207 1.28e-19

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 82.81  E-value: 1.28e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  62 SIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINH-TNHMFTHLVPQGTPPaLMSFMVLIETISNVI 140
Cdd:COG0356    63 TLFLFILVSNLLGL-IPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELA 140

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110684 141 RPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIfgQMLLLILESAVAMIQAYVFSILSTLY 207
Cdd:COG0356   141 RPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 2-212 5.16e-96

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 278.59  E-value: 5.16e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   2 FNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKsFNGTTFIFISIFIMMLFNNFMGL*FPYIF 81
Cdd:MTH00157   15 FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFILFNNFLGL-FPYIF 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  82 TSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLT 161
Cdd:MTH00157   93 TSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLT 172

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1227110684 162 LLGNTGPSMAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 212
Cdd:MTH00157  173 LLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 5-212 1.32e-48

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 158.66  E-value: 1.32e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   5 SLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNlTLHNEFKTLLGPKSFNGTTFIFISIFIMMLFNNFMGL*FPYIFTST 84
Cdd:MTH00176   21 SLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGL-IPYVFTST 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  85 SHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLG 164
Cdd:MTH00176   99 SHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLG 178

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1227110684 165 NTGPSMAMNLI---SLLIFGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 212
Cdd:MTH00176  179 AAMWGLLPVSPligFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 1-212 2.33e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 145.04  E-value: 2.33e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   1 IFNLSLNWTSTFLGLLLIPSMF----WLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFIMMLFNNFMGL* 76
Cdd:TIGR01131  12 LFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFLFILISNLLGL- 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  77 FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAG 156
Cdd:TIGR01131  90 IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAG 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110684 157 HLLLTLLGNTGPS-MAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 212
Cdd:TIGR01131 170 HLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 59-209 5.37e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 131.37  E-value: 5.37e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  59 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISN 138
Cdd:cd00310     7 LLGTLFLFILFSNLLGL-IPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISE 85

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1227110684 139 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSS 209
Cdd:cd00310    86 LIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 5-210 2.91e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 124.46  E-value: 2.91e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   5 SLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGpKSFNGTTFIFISIFIMMLFNNFMGL*FPYIFTST 84
Cdd:MTH00005   23 TAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISALFTMIILMNLSGL-LPYVFSTS 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  85 SHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLG 164
Cdd:MTH00005  101 SHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIG 180

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1227110684 165 NTGPSMAMNLIS---LLIFGQMLLLILESAVAMIQAYVFSILSTLYSSE 210
Cdd:MTH00005  181 IYAASALFSSISstiLLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 15-210 1.43e-34

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 122.39  E-value: 1.43e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  15 LLLIPSMFWLtPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIA 94
Cdd:MTH00035   33 LFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFILILSINVLGL-FPYAFTSTSHISLTYSLG 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  95 LPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNT----GPSM 170
Cdd:MTH00035  110 IPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTAiwelSNSP 189

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1227110684 171 AMNLISLLIFGqmLLLILESAVAMIQAYVFSILSTLYSSE 210
Cdd:MTH00035  190 LISIITLIIFF--LLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 8-210 8.01e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 120.36  E-value: 8.01e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   8 WTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGpKSFNGTTFIFISIFIMMLFNNFMGL*FPYIFTSTSHL 87
Cdd:MTH00173   24 WLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLFLFLISLNLSGL-LPFVFSVTSHL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  88 ALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTG 167
Cdd:MTH00173  102 AFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLIGNYL 181

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1227110684 168 PSMAMNLIS----LLIFGQMLLLILESAVAMIQAYVFSILSTLYSSE 210
Cdd:MTH00173  182 SSSLFSSSVvsllLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 10-210 1.02e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 114.92  E-value: 1.02e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  10 STFLGLLLIPSMFWLTPSRiNIIWNKL----NLTLHNEFKTLLGPKSFNGT--TFIFISIFIMMLFNNFMGL*FPYIFTS 83
Cdd:MTH00120   18 PLILLAMLIPALLIPSPKN-RLLTNRLttlqLWLIKLITKQLMLPLNKKGHkwALILTSLMLLLLLINLLGL-LPYTFTP 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  84 TSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLL 163
Cdd:MTH00120   96 TTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLI 175

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1227110684 164 GNTGPSM--AMNLISLLIFGQMLLL-ILESAVAMIQAYVFSILSTLYSSE 210
Cdd:MTH00120  176 STATLNLlpTMPTLSLLTLIILLLLtILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 59-210 9.93e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 107.27  E-value: 9.93e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  59 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISN 138
Cdd:MTH00132   72 LLTSLMLFLITLNMLGL-LPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227110684 139 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMA--MNLISLLIFGQMLLL-ILESAVAMIQAYVFSILSTLYSSE 210
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLplMPTVAILTATLLFLLtLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 11-210 2.53e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 106.19  E-value: 2.53e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  11 TFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTtFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALT 90
Cdd:MTH00179   25 LLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLFLLTLNLLGL-LPYTFTPTTQLSLN 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  91 FAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSM 170
Cdd:MTH00179  103 LGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAVFVL 182

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1227110684 171 A--MNLISLLIF-GQMLLLILESAVAMIQAYVFSILSTLYSSE 210
Cdd:MTH00179  183 MnfMGMVALLTLlVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 40-210 3.26e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 105.82  E-value: 3.26e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  40 LHNEFKTLLGPKSFNGT--TFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHL 117
Cdd:MTH00073   51 LQNFTKQLMLPLNTPGHkwALILTSLMVFLITMNLLGL-LPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHL 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684 118 VPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMA--MNLISLLIFGQMLLL-ILESAVAM 194
Cdd:MTH00073  130 LPEGTPTLLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLplMPTVSILTMIVLFLLtLLEIAVAM 209

                         170
                  ....*....|....*.
gi 1227110684 195 IQAYVFSILSTLYSSE 210
Cdd:MTH00073  210 IQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 57-207 4.58e-26

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 100.41  E-value: 4.58e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  57 TFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETI 136
Cdd:MTH00101   69 SLMLMSLILFIGSTNLLGL-LPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETI 147

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227110684 137 SNVIRPGTLAVRLAANMIAGHLLLTLLGN-----TGPSMAMNLISLLIFgqMLLLILESAVAMIQAYVFSILSTLY 207
Cdd:MTH00101  148 SLFIQPMALAVRLTANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_A pfam00119
ATP synthase A chain;
24-209 2.29e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 97.95  E-value: 2.29e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  24 LTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFISIFIMMLFNNFMGL--*FPYIFTSTSHLALTFAIALPMWLSF 101
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLipKSPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684 102 MLFGWINH-TNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIF 180
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1227110684 181 ---GQMLLLILESAVAMIQAYVFSILSTLYSS 209
Cdd:pfam00119 185 pplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 1-207 9.30e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 94.34  E-value: 9.30e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   1 IFNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIfISIFIMMLFNNFMGL*FPYI 80
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGL-FPYV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  81 FTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLL 160
Cdd:MTH00172   95 FTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLF 174

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1227110684 161 TLLGNTGPSMAMNLISLLIFGQMLLL---ILESAVAMIQAYVFSILSTLY 207
Cdd:MTH00172  175 AILAGFGFNMLCASGFLSLFPLLIMVfitLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 3-207 2.72e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 93.53  E-value: 2.72e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684   3 NLSLNWTSTFLGLLLIPSMFWL-------TPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFIMMLFNNFMGL 75
Cdd:MTH00175   23 DWLVTFTNSSMMMVLAVIIFWLllkgdklIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  76 *FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIA 155
Cdd:MTH00175  102 -FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISA 180

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1227110684 156 GHLLLTLLGNTGPSMAMNLISLLIFGQMLLLI----LESAVAMIQAYVFSILSTLY 207
Cdd:MTH00175  181 GHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 62-207 1.28e-19

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 82.81  E-value: 1.28e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  62 SIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINH-TNHMFTHLVPQGTPPaLMSFMVLIETISNVI 140
Cdd:COG0356    63 TLFLFILVSNLLGL-IPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELA 140

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110684 141 RPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIfgQMLLLILESAVAMIQAYVFSILSTLY 207
Cdd:COG0356   141 RPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 59-207 9.48e-18

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 78.30  E-value: 9.48e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  59 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFG-WINHTNHMFTHLVPQGTPpalmsFMVLIETIS 137
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPYLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684 138 NVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIFGqMLLLILESAVAMIQAYVFSILSTLY 207
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 24-207 1.03e-15

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 73.44  E-value: 1.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  24 LTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIfISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFML 103
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGL-FPYVFTPTVHMVITLGLSFAIIVGTTL 136

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684 104 FGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIFGQM 183
Cdd:MTH00174  137 AGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPF 216

                         170       180
                  ....*....|....*....|....*...
gi 1227110684 184 LLL----ILESAVAMIQAYVFSILSTLY 207
Cdd:MTH00174  217 AILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 61-207 5.46e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 54.75  E-value: 5.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  61 ISIFIMMLFNNFMGL*fPYIFTSTSHLALTFAIALpmwLSFMLFGWINHTNH----MFTHLVpQGTPPALMSFMVLIETI 136
Cdd:PRK13419  175 LTVFFFILVCNLLGLV-PYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFI 249

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1227110684 137 SNVIRPGTLAVRLAANMIAGHL-------LLTLLGNTGPSMAMNL-ISLLIFgqmlllILESAVAMIQAYVFSILSTLY 207
Cdd:PRK13419  250 GLFTKPFALTVRLFANMTAGHIvilslifISFILKSYIVAVAVSVpFAIFIY------LLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 12-210 1.32e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 46.90  E-value: 1.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  12 FLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLlgpKSFNGTTFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTF 91
Cdd:MTH00087   10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYS---NKLPLSSVISFFTFIVLLLFCFGGL-FPYSFSPCGMVEFTF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  92 AIALPMWLSFMLFGWINhtNHMFTHLVPQGTPPALMSF-MVLIETISNVIRPGTLAVRLAANMIAGHLLLtllgntgpSM 170
Cdd:MTH00087   86 LYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLIS--------SL 155

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1227110684 171 AMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLYSSE 210
Cdd:MTH00087  156 LNFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 82-207 2.27e-06

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 47.19  E-value: 2.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  82 TSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETI-SNVIRPGTLAVRLAANMIAGHLLL 160
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1227110684 161 T-LLGNTGPSMAMNLISLLIFGQMLLLILESAVAMIQAYVFSILSTLY 207
Cdd:PRK13417  297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 53-204 7.90e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.49  E-value: 7.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  53 FNGTTFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVL 132
Cdd:MTH00050   18 LGGSVSYYYSVVLFIVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCI 97

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1227110684 133 IETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTgpSMAMNLISLLIFgqmLLLILESAVAMIQAY-VFSILS 204
Cdd:MTH00050   98 AETISYIIRPVVLILRPFINISLGCFGGVALGNL--CFISYWWFLVLF---FLFFYEVFVALVHWFiVSSILS 165
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 12-207 1.67e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 38.18  E-value: 1.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  12 FLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLgPKSFNGTTFIFISIFIMMLFNNFMGL*fPYIFTSTSHLALTF 91
Cdd:PRK13420   31 VLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVL-PRHARLVLPFVGTLWIFILVANLIGLI-PGFHSPTADLSVTA 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110684  92 AIALPMWLSFMLFG-----WINHTNHmftHLVPQgtpPALMSFMVlietISNVIRPGTLAVRLAANMIaghllltllgnt 166
Cdd:PRK13420  109 ALALLVFFSVHWFGiraegLREYLKH---YLSPS---PFLLPFHL----ISEITRTLALAVRLFGNIM------------ 166

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1227110684 167 gpSMAMNLISLLIFGQML----LLILESAVAMIQAYVFSILSTLY 207
Cdd:PRK13420  167 --SLELAALLVLLVAGFLvpvpILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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