NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1227110668|gb|ASQ41299|]
View 

ATP synthase F0 subunit 6 (mitochondrion) [Schistocerca alutacea]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.04e-102

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 296.31  E-value: 1.04e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   1 MTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKsFNGTTFIFISIFIMM 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  81 LFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAV 160
Cdd:MTH00157   80 LFNNFLGL-FPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227110668 161 RLAANMIAGHLLLTLLGNTGPSMAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.04e-102

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 296.31  E-value: 1.04e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   1 MTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKsFNGTTFIFISIFIMM 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  81 LFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAV 160
Cdd:MTH00157   80 LFNNFLGL-FPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227110668 161 RLAANMIAGHLLLTLLGNTGPSMAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-225 2.33e-45

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 150.43  E-value: 2.33e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   4 LFSTFDPST-NIFNLSLNWTSTFLGLLLIPSMF----WLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFI 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  79 MMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTL 158
Cdd:TIGR01131  80 FILISNLLGL-IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISL 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1227110668 159 AVRLAANMIAGHLLLTLLGNTGPS-MAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 159 SVRLFANISAGHLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-222 1.18e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 133.68  E-value: 1.18e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  72 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISN 151
Cdd:cd00310     7 LLGTLFLFILFSNLLGL-IPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISE 85

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1227110668 152 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310    86 LIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
37-222 5.68e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 100.26  E-value: 5.68e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  37 LTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFISIFIMMLFNNFMGL--*FPYIFTSTSHLALTFAIALPMWLSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLipKSPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 115 MLFGWINH-TNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLII 193
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1227110668 194 ---GQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 pplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 75-220 5.07e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 84.35  E-value: 5.07e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  75 SIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINH-TNHMFTHLVPQGTPPaLMSFMVLIETISNVI 153
Cdd:COG0356    63 TLFLFILVSNLLGL-IPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELA 140

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110668 154 RPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIigQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356   141 RPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.04e-102

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 296.31  E-value: 1.04e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   1 MTNLFSTFDPSTNiFNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKsFNGTTFIFISIFIMM 80
Cdd:MTH00157    2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  81 LFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAV 160
Cdd:MTH00157   80 LFNNFLGL-FPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227110668 161 RLAANMIAGHLLLTLLGNTGPSMAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 8.60e-52

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 167.13  E-value: 8.60e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   1 MTNLFSTFDP-STNIFN-LSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNlTLHNEFKTLLGPKSFNGTTFIFISIFI 78
Cdd:MTH00176    2 LVDLFSSFDPpNKNIFSmISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  79 MMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTL 158
Cdd:MTH00176   81 LVMSLNLSGL-IPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 159 AVRLAANMIAGHLLLTLLGNTGPSMAMNLI---SLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWGLLPVSPligFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-225 2.33e-45

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 150.43  E-value: 2.33e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   4 LFSTFDPST-NIFNLSLNWTSTFLGLLLIPSMF----WLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFI 78
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  79 MMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTL 158
Cdd:TIGR01131  80 FILISNLLGL-IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISL 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1227110668 159 AVRLAANMIAGHLLLTLLGNTGPS-MAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 159 SVRLFANISAGHLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 7.46e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 136.79  E-value: 7.46e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   1 MTNLFSTFDPSTNIFNLSLN----WTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGpKSFNGTTFIFISI 76
Cdd:MTH00005    2 LTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  77 FIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPG 156
Cdd:MTH00005   81 FTMIILMNLSGL-LPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 157 TLAVRLAANMIAGHLLLTLLGNTGPSMAMNLIS---LLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIYAASALFSSISstiLLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-222 1.18e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 133.68  E-value: 1.18e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  72 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISN 151
Cdd:cd00310     7 LLGTLFLFILFSNLLGL-IPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISE 85

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1227110668 152 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310    86 LIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 2-223 4.45e-36

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 126.63  E-value: 4.45e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   2 TNLFSTFDPSTnIFNLSLNWTSTFLGL---LLIPSMFWLtPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFI 78
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  79 MMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTL 158
Cdd:MTH00035   82 LILSINVLGL-FPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110668 159 AVRLAANMIAGHLLLTLLGNTGPSMAMNLI--SLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00035  161 GLRLAANLTAGHLLIFLLSTAIWELSNSPLisIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 6.06e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 126.52  E-value: 6.06e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   1 MTNLFSTFDPSTNIFNL--SLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGpKSFNGTTFIFISIFI 78
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  79 MMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTL 158
Cdd:MTH00173   81 FLISLNLSGL-LPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1227110668 159 AVRLAANMIAGHLLLTLLGNTGPSMAMNLIS----LLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVvsllLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 23-223 3.21e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 114.15  E-value: 3.21e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  23 STFLGLLLIPSMFWLTPSRiNIIWNKL----NLTLHNEFKTLLGPKSFNGT--TFIFISIFIMMLFNNFMGL*FPYIFTS 96
Cdd:MTH00120   18 PLILLAMLIPALLIPSPKN-RLLTNRLttlqLWLIKLITKQLMLPLNKKGHkwALILTSLMLLLLLINLLGL-LPYTFTP 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  97 TSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGH------ 170
Cdd:MTH00120   96 TTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHlliqli 175

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1227110668 171 -LLLTLLGNTGPSMAMNLISLLiigqMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00120  176 sTATLNLLPTMPTLSLLTLIIL----LLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 2.61e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 111.58  E-value: 2.61e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668   1 MTNLFSTFDpSTNIFNLSLNWTSTFLGLLLIPSM-FWLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTtFIFISIFIM 79
Cdd:MTH00179    2 MLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLtNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  80 MLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLA 159
Cdd:MTH00179   80 LLTLNLLGL-LPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110668 160 VRLAANMIAGHLLLTLLGNTGPSMA--MNLISLLI-IGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00179  159 VRLTANITAGHLLMHLISSAVFVLMnfMGMVALLTlLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 72-223 8.82e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 107.65  E-value: 8.82e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  72 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISN 151
Cdd:MTH00132   72 LLTSLMLFLITLNMLGL-LPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227110668 152 VIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMA--MNLISLLIIGQMLLL-ILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLplMPTVAILTATLLFLLtLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 53-223 1.72e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 104.28  E-value: 1.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  53 LHNEFKTLLGPKSFNGT--TFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHL 130
Cdd:MTH00073   51 LQNFTKQLMLPLNTPGHkwALILTSLMVFLITMNLLGL-LPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHL 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 131 VPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMA--MNLISLLIIGQMLLL-ILESAVAM 207
Cdd:MTH00073  130 LPEGTPTLLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLplMPTVSILTMIVLFLLtLLEIAVAM 209

                         170
                  ....*....|....*.
gi 1227110668 208 IQAYVFSILSTLYSSE 223
Cdd:MTH00073  210 IQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 70-220 3.93e-26

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 100.80  E-value: 3.93e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  70 TFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETI 149
Cdd:MTH00101   69 SLMLMSLILFIGSTNLLGL-LPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETI 147

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1227110668 150 SNVIRPGTLAVRLAANMIAGHLLLTLLGN-----TGPSMAMNLISLLIIgqMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00101  148 SLFIQPMALAVRLTANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_A pfam00119
ATP synthase A chain;
37-222 5.68e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 100.26  E-value: 5.68e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  37 LTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFISIFIMMLFNNFMGL--*FPYIFTSTSHLALTFAIALPMWLSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLipKSPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 115 MLFGWINH-TNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLII 193
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1227110668 194 ---GQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 pplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 14-220 1.35e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 94.34  E-value: 1.35e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  14 IFNLSLNWTSTFLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIfISIFIMMLFNNFMGL*FPYI 93
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGL-FPYV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  94 FTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLL 173
Cdd:MTH00172   95 FTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLF 174

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1227110668 174 TLLGNTGPSMAM-----NLISLLIIgqMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00172  175 AILAGFGFNMLCasgflSLFPLLIM--VFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-220 1.94e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 94.30  E-value: 1.94e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  16 NLSLNWTSTFLGLLLIPSMFWL-------TPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIFiSIFIMMLFNNFMGL 88
Cdd:MTH00175   23 DWLVTFTNSSMMMVLAVIIFWLllkgdklIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  89 *FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIA 168
Cdd:MTH00175  102 -FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISA 180

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1227110668 169 GHLLLTLLGNTGPSMAMNLISLLIIGQMLLLI----LESAVAMIQAYVFSILSTLY 220
Cdd:MTH00175  181 GHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 75-220 5.07e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 84.35  E-value: 5.07e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  75 SIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINH-TNHMFTHLVPQGTPPaLMSFMVLIETISNVI 153
Cdd:COG0356    63 TLFLFILVSNLLGL-IPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELA 140

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1227110668 154 RPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIigQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356   141 RPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 72-220 6.52e-18

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 79.07  E-value: 6.52e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  72 IFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFG-WINHTNHMFTHLVPQGTPpalmsFMVLIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPYLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 151 NVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMNLISLLIIGqMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 37-220 3.30e-15

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 72.28  E-value: 3.30e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  37 LTPSRINIIWNKLNLTLHNEFKTLLGPKSFNGTTFIfISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFML 116
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGL-FPYVFTPTVHMVITLGLSFAIIVGTTL 136

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 117 FGWINHTNHMFTHLVPQGTPPALMSFMVLIETISNVIRPGTLAVRLAANMIAGHLLLTLLGNTGPSMAMN--LISLLIIG 194
Cdd:MTH00174  137 AGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTgiLIGSFVPF 216

                         170       180
                  ....*....|....*....|....*...
gi 1227110668 195 QMLLL--ILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00174  217 AILIFvtILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-220 4.85e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 55.52  E-value: 4.85e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  74 ISIFIMMLFNNFMGL*fPYIFTSTSHLALTFAIALpmwLSFMLFGWINHTNH----MFTHLVpQGTPPALMSFMVLIETI 149
Cdd:PRK13419  175 LTVFFFILVCNLLGLV-PYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFI 249

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1227110668 150 SNVIRPGTLAVRLAANMIAGHLLLTLLgnTGPSMAMN--LISLLIIGQMLLLI--LESAVAMIQAYVFSILSTLY 220
Cdd:PRK13419  250 GLFTKPFALTVRLFANMTAGHIVILSL--IFISFILKsyIVAVAVSVPFAIFIylLELFVAFLQAYIFTMLSALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 7.57e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 48.73  E-value: 7.57e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  95 TSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVLIETI-SNVIRPGTLAVRLAANMIAGHLLL 173
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1227110668 174 T-LLGNTGPSMAMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK13417  297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 25-223 1.08e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 47.28  E-value: 1.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  25 FLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLlgpKSFNGTTFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTF 104
Cdd:MTH00087   10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYS---NKLPLSSVISFFTFIVLLLFCFGGL-FPYSFSPCGMVEFTF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 105 AIALPMWLSFMLFGWINhtNHMFTHLVPQGTPPALMSF-MVLIETISNVIRPGTLAVRLAANMIAGHLLLtllgntgpSM 183
Cdd:MTH00087   86 LYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLIS--------SL 155

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1227110668 184 AMNLISLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00087  156 LNFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 66-169 9.13e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.49  E-value: 9.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  66 FNGTTFIFISIFIMMLFNNFMGL*FPYIFTSTSHLALTFAIALPMWLSFMLFGWINHTNHMFTHLVPQGTPPALMSFMVL 145
Cdd:MTH00050   18 LGGSVSYYYSVVLFIVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCI 97

                          90       100
                  ....*....|....*....|....
gi 1227110668 146 IETISNVIRPGTLAVRLAANMIAG 169
Cdd:MTH00050   98 AETISYIIRPVVLILRPFINISLG 121
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 25-220 2.74e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 40.88  E-value: 2.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668  25 FLGLLLIPSMFWLTPSRINIIWNKLNLTLHNEFKTLLgPKSFNGTTFIFISIFIMMLFNNFMGL*fPYIFTSTSHLALTF 104
Cdd:PRK13420   31 VLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVL-PRHARLVLPFVGTLWIFILVANLIGLI-PGFHSPTADLSVTA 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1227110668 105 AIALPMWLSFMLFG-----WINHTNHmftHLVPQgtpPALMSFMVlietISNVIRPGTLAVRLAANMIaghllltllgnt 179
Cdd:PRK13420  109 ALALLVFFSVHWFGiraegLREYLKH---YLSPS---PFLLPFHL----ISEITRTLALAVRLFGNIM------------ 166

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1227110668 180 gpSMAMNLISLLIIGQML----LLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK13420  167 --SLELAALLVLLVAGFLvpvpILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH