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Conserved domains on  [gi|1224780290|ref|WP_092797779|]
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MULTISPECIES: peptidylprolyl isomerase [unclassified Janthinobacterium]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SurA COG0760
Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, ...
 128-257 1.40e-43

Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 440523 [Multi-domain]  Cd Length: 143  Bit Score: 144.33  E-value: 1.40e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 128 AGDKEYHARHILV---------ATEAEAKDIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWASPASYVKPFSDAMVAL 196
Cdd:COG0760     4 DSPEEVRASHILVkvppsedraKAEAKAEELLAQLKAGADFAELAKeYSQDpGSAANGGDLGWFSRGQLVPEFEEAAFAL 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1224780290 197 KPGQITQtPVQTQFGYHVIKLEETRPTKLPALEEVKGQVAESLQQKKLAAYRDELLKKAKI 257
Cdd:COG0760    84 KPGEISG-PVKTQFGYHIIKVEDRRPAETPPFEEVKQQIRQELFQQALEAWLEELRKKAKI 143
prsA super family cl35263
peptidylprolyl isomerase; Provisional
 8-217 2.95e-16

peptidylprolyl isomerase; Provisional


The actual alignment was detected with superfamily member PRK04405:

Pssm-ID: 235295 [Multi-domain]  Cd Length: 298  Bit Score: 76.36  E-value: 2.95e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290   8 LILALVAVVAIPAFA-----QNVATVNGKAIPSSRVDQVVKQVVAQGKQADSPQLREAIKKDLiGREVLIQEADKQGYGT 82
Cdd:PRK04405    9 ALAAASAGLALSLAGcssnqATVATYSGGKITQSQYYKEMKQSSAGKTVLANMIIYRALEKQY-GKKVSTKKVDKQYNSY 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  83 RPEVKSQIDNA-----------RQSIIINALLADYVKKN-PVKDAEIKAEYdkfkaqagdKEYHAR----HILVATEAEA 146
Cdd:PRK04405   88 KKQYGSSFDSVlsqngmttssfKQNLRTNLLSEAALKKLkKVTNSQLKKAW---------KSYQPKvtvqHILVSKKSTA 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1224780290 147 KDIIAKLKGGAKFEELAK-VSKDGSAAN-GGDLDW--ASPASYVKPFSDAMVALKPGQITQTPVQTQFGYHVIKL 217
Cdd:PRK04405  159 ETVIKKLKDGKDFAKLAKkYSTDTATKNkGGKLSAfdSTDTTLDSTFKTAAFKLKNGEYTTTPVKTTYGYEVIKM 233
 
Name Accession Description Interval E-value
SurA COG0760
Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, ...
 128-257 1.40e-43

Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440523 [Multi-domain]  Cd Length: 143  Bit Score: 144.33  E-value: 1.40e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 128 AGDKEYHARHILV---------ATEAEAKDIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWASPASYVKPFSDAMVAL 196
Cdd:COG0760     4 DSPEEVRASHILVkvppsedraKAEAKAEELLAQLKAGADFAELAKeYSQDpGSAANGGDLGWFSRGQLVPEFEEAAFAL 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1224780290 197 KPGQITQtPVQTQFGYHVIKLEETRPTKLPALEEVKGQVAESLQQKKLAAYRDELLKKAKI 257
Cdd:COG0760    84 KPGEISG-PVKTQFGYHIIKVEDRRPAETPPFEEVKQQIRQELFQQALEAWLEELRKKAKI 143
prsA PRK00059
peptidylprolyl isomerase; Provisional
 25-243 4.61e-31

peptidylprolyl isomerase; Provisional


Pssm-ID: 234605 [Multi-domain]  Cd Length: 336  Bit Score: 117.50  E-value: 4.61e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  25 VATVNGKAIPSSRVDQ--VVKQVVAQGKQ------ADSPQLREAIKK-------DLIGREVLIQEADKQG-YGTRPEVKS 88
Cdd:PRK00059   38 VATVNGEKITRGDLDKdpKMQQVLEQLKQqygdnyEKNEQVKEQIKQqkeqildSLITEKVLLQKAKELKlIPSEEELNK 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  89 QIDNA---------------------------------RQSIIINALLADYVKKNPVKDAEIKAEYDKFKAQ--AGDKEY 133
Cdd:PRK00059  118 EVDKKineikkqfnndeeqfeealkatgfteetfkeylKNQIIIEKVINEVVKDVKVTDKDAQKYYNENKSKftEKPNTM 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 134 HARHILVATEAEAKDIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWA--SPASYVKPFSDAMVALKPGQITQtPVQTQ 209
Cdd:PRK00059  198 HLAHILVKTEDEAKKVKKRLDKGEDFAKVAKeVSQDpGSKDKGGDLGDVpySDSGYDKEFMDGAKALKEGEISA-PVKTQ 276

                         250       260       270
                  ....*....|....*....|....*....|....
gi 1224780290 210 FGYHVIKLEETRPTKLPALEEVKGQVAESLQQKK 243
Cdd:PRK00059  277 FGYHIIKAIKKKEYPVKPFDSVKEDIKKQLLQEK 310
Rotamase_3 pfam13616
PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalysing the ...
 134-221 3.16e-20

PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline.


Pssm-ID: 404499 [Multi-domain]  Cd Length: 116  Bit Score: 83.19  E-value: 3.16e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 134 HARHILVA-------TEAEAK----DIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWASPASYVKPFSDAMVALKPGQ 200
Cdd:pfam13616  17 KASHILISysqavsrTEEEAKakadSLLAALKNGADFAALAKtYSDDpASKNNGGDLGWFTKGQMVKEFEDAVFSLKVGE 96

                          90       100
                  ....*....|....*....|.
gi 1224780290 201 ITQtPVQTQFGYHVIKLEETR 221
Cdd:pfam13616  97 ISG-VVKTQFGFHIIKVTDKK 116
prsA PRK04405
peptidylprolyl isomerase; Provisional
 8-217 2.95e-16

peptidylprolyl isomerase; Provisional


Pssm-ID: 235295 [Multi-domain]  Cd Length: 298  Bit Score: 76.36  E-value: 2.95e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290   8 LILALVAVVAIPAFA-----QNVATVNGKAIPSSRVDQVVKQVVAQGKQADSPQLREAIKKDLiGREVLIQEADKQGYGT 82
Cdd:PRK04405    9 ALAAASAGLALSLAGcssnqATVATYSGGKITQSQYYKEMKQSSAGKTVLANMIIYRALEKQY-GKKVSTKKVDKQYNSY 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  83 RPEVKSQIDNA-----------RQSIIINALLADYVKKN-PVKDAEIKAEYdkfkaqagdKEYHAR----HILVATEAEA 146
Cdd:PRK04405   88 KKQYGSSFDSVlsqngmttssfKQNLRTNLLSEAALKKLkKVTNSQLKKAW---------KSYQPKvtvqHILVSKKSTA 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1224780290 147 KDIIAKLKGGAKFEELAK-VSKDGSAAN-GGDLDW--ASPASYVKPFSDAMVALKPGQITQTPVQTQFGYHVIKL 217
Cdd:PRK04405  159 ETVIKKLKDGKDFAKLAKkYSTDTATKNkGGKLSAfdSTDTTLDSTFKTAAFKLKNGEYTTTPVKTTYGYEVIKM 233
SurA_N_3 pfam13624
SurA N-terminal domain; This domain is found at the N-terminus of the chaperone SurA. It is a ...
 6-90 1.60e-07

SurA N-terminal domain; This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.


Pssm-ID: 433358 [Multi-domain]  Cd Length: 162  Bit Score: 49.88  E-value: 1.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290   6 ARLILALVAVVAI--------PAFAQNVATVNGKAIPSSRVDQVVKQVVAQ----------GKQADSPQLREAIKKDLIG 67
Cdd:pfam13624  14 AKIILGLIILSFVfwgvgsyfSGGGGAVAKVNGEKISRAEFQRAYRRQLDQlrqqfgpnldAELLDELGLRQQVLDQLID 93

                          90       100
                  ....*....|....*....|....
gi 1224780290  68 REVLIQEADKQGYG-TRPEVKSQI 90
Cdd:pfam13624  94 RALLLQEAKKLGLAvSDEEVRQAI 117
 
Name Accession Description Interval E-value
SurA COG0760
Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, ...
 128-257 1.40e-43

Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440523 [Multi-domain]  Cd Length: 143  Bit Score: 144.33  E-value: 1.40e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 128 AGDKEYHARHILV---------ATEAEAKDIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWASPASYVKPFSDAMVAL 196
Cdd:COG0760     4 DSPEEVRASHILVkvppsedraKAEAKAEELLAQLKAGADFAELAKeYSQDpGSAANGGDLGWFSRGQLVPEFEEAAFAL 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1224780290 197 KPGQITQtPVQTQFGYHVIKLEETRPTKLPALEEVKGQVAESLQQKKLAAYRDELLKKAKI 257
Cdd:COG0760    84 KPGEISG-PVKTQFGYHIIKVEDRRPAETPPFEEVKQQIRQELFQQALEAWLEELRKKAKI 143
prsA PRK00059
peptidylprolyl isomerase; Provisional
 25-243 4.61e-31

peptidylprolyl isomerase; Provisional


Pssm-ID: 234605 [Multi-domain]  Cd Length: 336  Bit Score: 117.50  E-value: 4.61e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  25 VATVNGKAIPSSRVDQ--VVKQVVAQGKQ------ADSPQLREAIKK-------DLIGREVLIQEADKQG-YGTRPEVKS 88
Cdd:PRK00059   38 VATVNGEKITRGDLDKdpKMQQVLEQLKQqygdnyEKNEQVKEQIKQqkeqildSLITEKVLLQKAKELKlIPSEEELNK 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  89 QIDNA---------------------------------RQSIIINALLADYVKKNPVKDAEIKAEYDKFKAQ--AGDKEY 133
Cdd:PRK00059  118 EVDKKineikkqfnndeeqfeealkatgfteetfkeylKNQIIIEKVINEVVKDVKVTDKDAQKYYNENKSKftEKPNTM 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 134 HARHILVATEAEAKDIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWA--SPASYVKPFSDAMVALKPGQITQtPVQTQ 209
Cdd:PRK00059  198 HLAHILVKTEDEAKKVKKRLDKGEDFAKVAKeVSQDpGSKDKGGDLGDVpySDSGYDKEFMDGAKALKEGEISA-PVKTQ 276

                         250       260       270
                  ....*....|....*....|....*....|....
gi 1224780290 210 FGYHVIKLEETRPTKLPALEEVKGQVAESLQQKK 243
Cdd:PRK00059  277 FGYHIIKAIKKKEYPVKPFDSVKEDIKKQLLQEK 310
Rotamase_3 pfam13616
PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalysing the ...
 134-221 3.16e-20

PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline.


Pssm-ID: 404499 [Multi-domain]  Cd Length: 116  Bit Score: 83.19  E-value: 3.16e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 134 HARHILVA-------TEAEAK----DIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWASPASYVKPFSDAMVALKPGQ 200
Cdd:pfam13616  17 KASHILISysqavsrTEEEAKakadSLLAALKNGADFAALAKtYSDDpASKNNGGDLGWFTKGQMVKEFEDAVFSLKVGE 96

                          90       100
                  ....*....|....*....|.
gi 1224780290 201 ITQtPVQTQFGYHVIKLEETR 221
Cdd:pfam13616  97 ISG-VVKTQFGFHIIKVTDKK 116
prsA PRK03095
peptidylprolyl isomerase PrsA;
3-254 1.29e-18

peptidylprolyl isomerase PrsA;


Pssm-ID: 179537 [Multi-domain]  Cd Length: 287  Bit Score: 83.12  E-value: 1.29e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290   3 LKPARLILALVAVVAIPAfaqnVATVNGKAIPSSRVDQVVK-QVVAQGKQADSPQlreaIKKDLIGREVLIQ-------E 74
Cdd:PRK03095    1 MKKAMLALAATSVIALSA----CGTSSSDKIVTSKAGDITKdEFYEQMKTQAGKQ----VLNNMVMEKVLIKnykvedkE 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  75 ADKQGYGTRPEVKSQIDN-ARQSIIINALLADYVKKNPVKDAEI-KAEYDKFKAQAGDKEYHARHILVATEAEAKDIIAK 152
Cdd:PRK03095   73 VDKKYDEMKKQYGDQFDTlLKQQGIKEETLKTGVRAQLAQEKAIeKTITDKELKDNYKPEIKASHILVKDEATAKKVKEE 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 153 LKGGAKFEELAK-VSKD-GSAANGGDLDWASPASYVKPFSDAMVALKPGQITQtPVQTQFGYHVIKLEETRPTKLPaLEE 230
Cdd:PRK03095  153 LGQGKSFEELAKqYSEDtGSKEKGGDLGFFGAGKMVKEFEDAAYKLKKDEVSE-PVKSQFGYHIIKVTDIKEPEKS-FEQ 230

                         250       260
                  ....*....|....*....|....*.
gi 1224780290 231 VKGQVAESLQQKKL--AAYRDELLKK 254
Cdd:PRK03095  231 SKADIKKELVQKKAqdGEFMNDLMMK 256
Rotamase pfam00639
PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalysing the ...
 137-219 1.42e-18

PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline.


Pssm-ID: 425792 [Multi-domain]  Cd Length: 96  Bit Score: 78.11  E-value: 1.42e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 137 HILVAT-------EAEAKDIIAKL-----KGGAKFEELA-KVSKD-GSAANGGDLDWASPASYVKPFSDAMVALKPGQIT 202
Cdd:pfam00639   1 HILIKTpeaserdRAEAKAKAEEIleqlkSGEDSFAELArKYSDDcPSAANGGDLGWFTRGQLPPEFEKAAFALKPGEIS 80

                          90
                  ....*....|....*..
gi 1224780290 203 QtPVQTQFGYHVIKLEE 219
Cdd:pfam00639  81 G-PVETRFGFHIIKLTD 96
prsA PRK03002
peptidylprolyl isomerase PrsA;
109-258 3.90e-18

peptidylprolyl isomerase PrsA;


Pssm-ID: 101162 [Multi-domain]  Cd Length: 285  Bit Score: 81.52  E-value: 3.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 109 KNPVKDAEIKAEYDKfkaqagdkEYHARHILVATEAEAKDIIAKLKGGAKFEELAKV-SKD-GSAANGGDLDWASPASYV 186
Cdd:PRK03002  121 KKSVTEKDVKDHYKP--------EIKASHILVSDENEAKEIKKKLDAGASFEELAKQeSQDlLSKEKGGDLGYFNSGRMA 192

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1224780290 187 KPFSDAMVALKPGQITQtPVQTQFGYHVIKLeeTRPTKLPALEEVKGQVAESLQQKKLA--AYRDELL----KKAKIQ 258
Cdd:PRK03002  193 PEFETAAYKLKVGQISN-PVKSPNGYHIIKL--TDKKDLKPYDEVKDSIRKNLEEERTAdpIFGKKLLqselKKANIK 267
PRK10788 PRK10788
periplasmic folding chaperone; Provisional
 104-247 1.23e-17

periplasmic folding chaperone; Provisional


Pssm-ID: 182731 [Multi-domain]  Cd Length: 623  Bit Score: 81.98  E-value: 1.23e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 104 ADYVKKNPVKDAEIKAEYDKFKA---QAGDKEYHArhILVATEAEAKDIIAKLKGGAKFEELAKV-SKDG-SAANGGDLD 178
Cdd:PRK10788  241 ATMQQKITVSDADIQAYYDQHQDqftQPERKRYSI--IQTKTEAEAKAVLDELKKGADFATLAKEkSTDIiSARNGGDLG 318

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 179 WASPASYVKPFSDAMVALKpGQITQtPVQTQFGYHVIKLEETRPTKLPALEEVKGQVAESL-QQKKLAAY 247
Cdd:PRK10788  319 WLEPATTPDELKNAGLKEK-GQLSG-VIKSSVGFLIVRLDDIQPAKVKPLSEVRDDIAAKVkQEKALDAY 386
PRK10770 PRK10770
peptidyl-prolyl cis-trans isomerase SurA; Provisional
 132-221 1.37e-16

peptidyl-prolyl cis-trans isomerase SurA; Provisional


Pssm-ID: 236758 [Multi-domain]  Cd Length: 413  Bit Score: 78.24  E-value: 1.37e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 132 EYHARHIL-----VATEAEAK----DIIAKLKGG-AKFEELAK-VSKD-GSAANGGDLDWASPASYVKPFSDAMVALKPG 199
Cdd:PRK10770  266 EVHARHILlkpspIMTDEQARakleQIAADIKSGkTTFAAAAKeFSQDpGSANQGGDLGWATPDIFDPAFRDALMRLNKG 345

                          90       100
                  ....*....|....*....|..
gi 1224780290 200 QITQtPVQTQFGYHVIKLEETR 221
Cdd:PRK10770  346 QISA-PVHSSFGWHLIELLDTR 366
prsA PRK04405
peptidylprolyl isomerase; Provisional
 8-217 2.95e-16

peptidylprolyl isomerase; Provisional


Pssm-ID: 235295 [Multi-domain]  Cd Length: 298  Bit Score: 76.36  E-value: 2.95e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290   8 LILALVAVVAIPAFA-----QNVATVNGKAIPSSRVDQVVKQVVAQGKQADSPQLREAIKKDLiGREVLIQEADKQGYGT 82
Cdd:PRK04405    9 ALAAASAGLALSLAGcssnqATVATYSGGKITQSQYYKEMKQSSAGKTVLANMIIYRALEKQY-GKKVSTKKVDKQYNSY 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  83 RPEVKSQIDNA-----------RQSIIINALLADYVKKN-PVKDAEIKAEYdkfkaqagdKEYHAR----HILVATEAEA 146
Cdd:PRK04405   88 KKQYGSSFDSVlsqngmttssfKQNLRTNLLSEAALKKLkKVTNSQLKKAW---------KSYQPKvtvqHILVSKKSTA 158

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1224780290 147 KDIIAKLKGGAKFEELAK-VSKDGSAAN-GGDLDW--ASPASYVKPFSDAMVALKPGQITQTPVQTQFGYHVIKL 217
Cdd:PRK04405  159 ETVIKKLKDGKDFAKLAKkYSTDTATKNkGGKLSAfdSTDTTLDSTFKTAAFKLKNGEYTTTPVKTTYGYEVIKM 233
prsA PRK02998
peptidylprolyl isomerase; Reviewed
 109-244 1.06e-15

peptidylprolyl isomerase; Reviewed


Pssm-ID: 179522 [Multi-domain]  Cd Length: 283  Bit Score: 74.62  E-value: 1.06e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 109 KNPVKDAEIKAEYDKfkaqagdkEYHARHILVATEAEAKDIIAKLKGGAKFEELAK-VSKD-GSAANGGDLDWASPASYV 186
Cdd:PRK02998  119 KATVTEKDVKDNYKP--------EMKVSHILVKDEKTAKEVKEKVNNGEDFAALAKqYSEDtGSKEQGGEISGFAPGQTV 190

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1224780290 187 KPFSDAMVALKPGQITQtPVQTQFGYHVIKLeeTRPTKLPALEEVKGQVAESLQQKKL 244
Cdd:PRK02998  191 KEFEEAAYKLDAGQVSE-PVKTTYGYHIIKV--TDKKELKPFDEVKDSIRKDLEQQRL 245
Rotamase_2 pfam13145
PPIC-type PPIASE domain;
112-232 3.36e-15

PPIC-type PPIASE domain;


Pssm-ID: 432992 [Multi-domain]  Cd Length: 121  Bit Score: 69.78  E-value: 3.36e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 112 VKDAEIKAEYDKFKAQAGDKEYHARHILVATEAEAKDIIAKLKGGAKFEELAKVsKDGSAANGGDLDWASPASYV-KPFS 190
Cdd:pfam13145   1 VTEEELKAYYEENKDEFSTPEGRLLEILVFKDQVAADAALALLKAGALEDFAAL-AKGEGIKAATLDIVESAELLpEELA 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1224780290 191 DAMVALKPGQITqTPVQTQFGYHVIKLEETRPTKLPALEEVK 232
Cdd:pfam13145  80 KAAFALKPGEVS-GPIKTGNGYYVVRVTEIKPAQPLPFEEAK 120
PTZ00356 PTZ00356
peptidyl-prolyl cis-trans isomerase (PPIase); Provisional
 134-216 3.59e-12

peptidyl-prolyl cis-trans isomerase (PPIase); Provisional


Pssm-ID: 185573 [Multi-domain]  Cd Length: 115  Bit Score: 61.58  E-value: 3.59e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 134 HARHILVA------------------TEAEAKDIIAKL-----KGGAKFEELAKVSKD-GSAANGGDLDWASPASYVKPF 189
Cdd:PTZ00356    7 RAAHLLIKhtgsrnpvsrrtgkpvtrSKEEAIKELAKWreqivSGEKTFEEIARQRSDcGSAAKGGDLGFFGRGQMQKPF 86

                          90       100
                  ....*....|....*....|....*..
gi 1224780290 190 SDAMVALKPGQITQtPVQTQFGYHVIK 216
Cdd:PTZ00356   87 EDAAFALKVGEISD-IVHTDSGVHIIL 112
PRK15441 PRK15441
peptidyl-prolyl cis-trans isomerase C; Provisional
 131-217 9.63e-11

peptidyl-prolyl cis-trans isomerase C; Provisional


Pssm-ID: 185338 [Multi-domain]  Cd Length: 93  Bit Score: 56.96  E-value: 9.63e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 131 KEYHARHILVATEAEAKDIIAKLKGGAKFEELAKV-SKDGSAANGGDLDWASPASYVKPFsDAMVALKPGQITQTPVQTQ 209
Cdd:PRK15441    3 KTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKhSICPSGKRGGDLGEFRQGQMVPAF-DKVVFSCPVLEPTGPLHTQ 81


                  ....*...
gi 1224780290 210 FGYHVIKL 217
Cdd:PRK15441   82 FGYHIIKV 89
PRK10770 PRK10770
peptidyl-prolyl cis-trans isomerase SurA; Provisional
 26-221 1.72e-08

peptidyl-prolyl cis-trans isomerase SurA; Provisional


Pssm-ID: 236758 [Multi-domain]  Cd Length: 413  Bit Score: 54.36  E-value: 1.72e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  26 ATVNGKAIPSSRVDQVVKQVVAQGKQA-----DSPQLREAIKKDLIGREVLIQEADK-------------------QGYG 81
Cdd:PRK10770   12 AVVNNGVVLESDVDGLMQSVKLNAQQAgqqlpDDATLRHQILERLIMDNIILQMAQKmgvkisdeqldqaianiaaQNNM 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290  82 TRPEVKSQI-------DNARQSIIINALLADyVKKNPVK------DAEIKAEYDKFKAQ-AGDKEYHARHILVA------ 141
Cdd:PRK10770   92 TLDQMRSRLaydglnyNTYRNQIRKEMIISE-VRNNEVRrritilPQEVDSLAKQIGNQnDASTELNLSHILIPlpenpt 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290 142 ------TEAEAKDIIAKLKGGAKFEELA-KVSKDGSAANGGDLDWASPASYVKPFSDAMVALKPGQITqTPVQTQFGYHV 214
Cdd:PRK10770  171 qdqvdeAESQARSIVDQARNGADFGKLAiAYSADQQALKGGQMGWGRIQELPGLFAQALSTAKKGDIV-GPIRSGVGFHI 249


                  ....*..
gi 1224780290 215 IKLEETR 221
Cdd:PRK10770  250 LKVNDLR 256
SurA_N_3 pfam13624
SurA N-terminal domain; This domain is found at the N-terminus of the chaperone SurA. It is a ...
 6-90 1.60e-07

SurA N-terminal domain; This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.


Pssm-ID: 433358 [Multi-domain]  Cd Length: 162  Bit Score: 49.88  E-value: 1.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290   6 ARLILALVAVVAI--------PAFAQNVATVNGKAIPSSRVDQVVKQVVAQ----------GKQADSPQLREAIKKDLIG 67
Cdd:pfam13624  14 AKIILGLIILSFVfwgvgsyfSGGGGAVAKVNGEKISRAEFQRAYRRQLDQlrqqfgpnldAELLDELGLRQQVLDQLID 93

                          90       100
                  ....*....|....*....|....
gi 1224780290  68 REVLIQEADKQGYG-TRPEVKSQI 90
Cdd:pfam13624  94 RALLLQEAKKLGLAvSDEEVRQAI 117
SurA_N_2 pfam13623
SurA N-terminal domain; This domain is found at the N-terminus of the chaperone SurA. It is a ...
 6-92 7.70e-06

SurA N-terminal domain; This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.


Pssm-ID: 463938  Cd Length: 145  Bit Score: 44.49  E-value: 7.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1224780290   6 ARLILALVAVVAIPAFA----------------QNVATVNGKAIPSSRVDQVVKQVVAQGKQ----------ADSPQLRE 59
Cdd:pfam13623   8 SGGLLAIIIGLALLAFIigdlfgvgsylfggssNVVAEVNGEEISYQEFQQAVENQRNRLRQqlgqnfdpaeLDEAQLRE 87

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1224780290  60 AIKKDLIGREVLIQEADKQGYG-TRPEVKSQIDN 92
Cdd:pfam13623  88 QVWDQLVREKLLLQEAEKLGLTvSDEELVDAIQG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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