|
Name |
Accession |
Description |
Interval |
E-value |
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
1-498 |
0e+00 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 1016.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 1 MNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYKWINFFDFHWRL 80
Cdd:CHL00011 1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 81 GIDGLSIGPILLTGFITTLATLAAWPITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKR 160
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 161 LYSATKFILYTAGGSVFLLMGVLGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGE 240
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 321 SSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIV 400
Cdd:CHL00011 321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 401 FFGIITGQKYLLIPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPKDSFFDSGPRELFLSISIFLPVIGIGIYPD 480
Cdd:CHL00011 401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
|
490
....*....|....*...
gi 122245642 481 FVLSLAVDKVEVILSNFF 498
Cdd:CHL00011 481 FVLSLSVDKVEAILSNYF 498
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
1-482 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 580.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 1 MNYFPWLTIIVVFPIFAGSLIFFLPHKGN-RVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYKWINFFDFHWR 79
Cdd:PRK02546 3 LANFPWLTTIILFPIVAALLIPFIPDKGDgKTVRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTWS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAWPITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKK 159
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 160 RLYSATKFILYTAGGSVFLLMGVLGVALYGSNePTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHG 239
Cdd:PRK02546 163 RQYAATKFILYTAGSSLFILLAALAMAFYGDT-PTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 240 EAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIG 319
Cdd:PRK02546 242 EATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 320 ISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELI 399
Cdd:PRK02546 322 IGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 400 VFFGIITGQKYLLIPKILITFVMAIGMILTPIYSLSMSRQMFYG---YKLFNapKDSFFDSGPRELFLSISIFLPVIGIG 476
Cdd:PRK02546 402 VFVGFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGpenKELVS--HEKLVDAEPREVFIIACLLVPIIGIG 479
|
....*.
gi 122245642 477 IYPDFV 482
Cdd:PRK02546 480 LYPKLV 485
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
27-479 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 573.13 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 27 KGNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWP 106
Cdd:PRK12561 2 KEGKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 107 ITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGVA 186
Cdd:PRK12561 82 VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 187 LYGSNePTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM 266
Cdd:PRK12561 162 LSGDT-FTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 267 ELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALF 346
Cdd:PRK12561 241 QMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALF 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 347 FLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAIGM 426
Cdd:PRK12561 321 FLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 122245642 427 ILTPIYSLSMSRQMFYGYKLFNAPKDSFF-DSGPRELFLSISIFLPVIGIGIYP 479
Cdd:PRK12561 401 ILTPIYLLSMLRRVFYGPRSELLPALAVVeDAKPRELFIALSLLVPIIGIGFYP 454
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-497 |
1.55e-171 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 492.29 E-value: 1.55e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 4 FPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFcYHFQSDDPLIQLVEDYKWINFFDFHWRLGID 83
Cdd:COG1008 3 MPLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLL-AGFDPGTGGFQFVESYPWIPSLGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 84 GLSIGPILLTGFITTLATLAAWP-ITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLY 162
Cdd:COG1008 82 GISLPLVLLTALLTPLAILASWNeIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 163 SATKFILYTAGGSVFLLMGVLGVALYgSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAH 242
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFL-AGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 243 YSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISS 322
Cdd:COG1008 241 TAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 323 LTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFF 402
Cdd:COG1008 321 LNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 403 GIITgqkylliPKILITFVMAIGMILTPIYSLSMSRQMFYGYklFNAPKDSFFDSGPRELFLSISIFLPVIGIGIYPDFV 482
Cdd:COG1008 401 GAFQ-------VNPWLAILAALGLILTAAYLLWMYQRVFFGP--LKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
|
490
....*....|....*
gi 122245642 483 LSLAVDKVEVILSNF 497
Cdd:COG1008 472 LDLIEPSVEALLARV 486
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
7-497 |
1.48e-142 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 418.19 E-value: 1.48e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFcYHFQSDDPLIQLVEDYKWINFFDFHWRLGIDGLS 86
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLL-FQFDPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 87 IGPILLTGFITTLATLAAWP-ITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSAT 165
Cdd:TIGR01972 80 LLLVLLTALLTLLAILASWEsIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 166 KFILYTAGGSVFLLMGVLGvaLYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYST 245
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAILG--LYFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 246 CMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTD 325
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 326 TGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGII 405
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 406 TgqkylliPKILITFVMAIGMILTPIYSLSMSRQMFYGyKLFNAPKDSFFDSGPRELFLSISIFLPVIGIGIYPDFVLSL 485
Cdd:TIGR01972 398 K-------VNPVVAFLAALGIVLAAAYMLTLYKRVFFG-ELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDL 469
|
490
....*....|..
gi 122245642 486 AVDKVEVILSNF 497
Cdd:TIGR01972 470 TEPSVNNLLSQV 481
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-497 |
7.21e-140 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 411.90 E-value: 7.21e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 4 FPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCyHFQSDDPLIQLVEDYKWINFFDFHWRLGID 83
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWI-GFDSSNAGFQFVEKHPWIPRFGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 84 GLSIGPILLTGFITTLATLAAW-PITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLY 162
Cdd:PRK05846 82 GISLLLVVLTALLTPLAVLASWeEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 163 SATKFILYTAGGSVFLLMGVLGVALYGSNEP-TLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEA 241
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVVVYYNATgTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 242 HYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIS 321
Cdd:PRK05846 242 PTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 322 SLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVF 401
Cdd:PRK05846 322 AGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 402 FGIITGqkyllipKILITFVMAIGMILTPIYSLSMSRQMFYGYKlfNAPKDSFFDSGPRELFLSISIFLPVIGIGIYPDF 481
Cdd:PRK05846 402 LGSFQV-------NPVIAFIATTGLILAAVYSLWLYQRVMFGPV--KNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
490
....*....|....*.
gi 122245642 482 VLSLAVDKVEVILSNF 497
Cdd:PRK05846 473 LLDVIHPSVENLLQWV 488
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
7-443 |
6.28e-90 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 283.90 E-value: 6.28e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPIFAGSLIFFLPHKGN-RVIRWYTICICILELLLTTyAFCYHFQSDDPLIQLVEDYKWINFFDFHWRLGIDGL 85
Cdd:PRK06473 2 LSALIWIPLLGAILIGFWPSGINgKLARSVALVIASVLLLLSL-VLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 86 SIGPILLTGFITTLATLAAWPITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSAT 165
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 166 KFILYTAGGSVFLLMGVLGVAlYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYST 245
Cdd:PRK06473 161 KFLLYTAISGILILVSFLGLV-WLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 246 CMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTD 325
Cdd:PRK06473 240 SVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 326 TGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASP---MPKMFTMFSSFSMASLALPGMSGFVAELIVFF 402
Cdd:PRK06473 320 LSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMASAGIPGMVGFIAEFLVFR 399
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 122245642 403 GiitgqKYLLIPkiLITFVMAIGMILTPIYSLSMSRQMFYG 443
Cdd:PRK06473 400 G-----SFPIFP--VQTLLCMIGTGLTAVYFLLLVNRVFFG 433
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
7-403 |
4.72e-81 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 260.80 E-value: 4.72e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPIFAGSLIFFLPHK-GNRVIRWYTICICILELLLTTYAFcYHFQSDDPLIQLVEDYKWINFFDFHWRLGIDGL 85
Cdd:PRK07363 2 LSVLLWLPILGAIIIGFFPGNlPSARLRQITLVFAVLVLAWSLFLL-TQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 86 SIGPILLTGFITTLATLAAWPITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSAT 165
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 166 KFILYTAGGSVFLLMGVLGVALYgSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYST 245
Cdd:PRK07363 161 KFLIYTAVSGLLVLAAFLGIVWL-SGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 246 CMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTD 325
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 326 TGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASP---MPKMFTMFSSFSMASLALPGMSGFVAELIVFF 402
Cdd:PRK07363 320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
.
gi 122245642 403 G 403
Cdd:PRK07363 400 G 400
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-424 |
1.01e-69 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 228.88 E-value: 1.01e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 1 MNYFPWLtiIVVFPIFAGSLIFFLPHKGnRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEdykWINFFDFHwrL 80
Cdd:COG0651 1 MSHLLIL--PVLLPLLAAALLLLLGRRR-RLQRALSLLASLALLALALALLLQVLAGGPLVYALGG---WPAPFGIV--L 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 81 GIDGLSIGPILLTGFITTLATLAAWP---ITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGG 157
Cdd:COG0651 73 VADRLSALFLLLTALVALAVLLYSIGymrHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 158 KKRLYSATKFILYTAGGSVFLLMGVlgVALYGSNePTLNFE---TSVNQSYPVVLEIIFYIgFFIAFAVKSPIIPLHTWL 234
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGV--GLLYGAT-GTLNMAdlaARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIF-SPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHM 313
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFlGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 314 GFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSG 393
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
410 420 430
....*....|....*....|....*....|.
gi 122245642 394 FVAELIVFFGIITGQKYLLIPKILITFVMAI 424
Cdd:COG0651 389 FVSKWLLLQAALEAGAWLLAAVLLLSSLLTL 419
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
6-485 |
4.88e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 204.91 E-value: 4.88e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 6 WLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQsdDPLIQLVEDYKWI--NFFDFHWR---L 80
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPRENSVKLKKRALEWSLAILFSTLVLWGAFDG--EGQFQFINLIEWIisPTLNFQWGplvF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 81 GIDGLSIGPILLTGFITTLATLAAW-PITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKK 159
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWkSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 160 -RLYSATKFILYTAGGSVFLLMGVLgvALYgSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTH 238
Cdd:MTH00204 160 eKVRASYYFFFYTFAGSVFMLLGIF--QLY-SITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 239 GEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIII 318
Cdd:MTH00204 237 VEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 319 GISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAEl 398
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGE- 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 399 ivFFGIITGQKYLLIPKILITFvmaiGMILTPIYSLSMSRQMFYG----YKLFNApkdsffDSGPRELFLSISIFLPVIG 474
Cdd:MTH00204 396 --FFSLLAAFEYSLGLGVLVTS----GMVWSAAYSLYLYNRISFGggsnYLLFSR------DLNRRELLAILPLIIAIFL 463
|
490
....*....|.
gi 122245642 475 IGIYPDFVLSL 485
Cdd:MTH00204 464 LGIVPFIIIDL 474
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
7-484 |
1.65e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 190.26 E-value: 1.65e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPIFAGSLIFFLPHKgnRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYKWINFFDFHWR---LGID 83
Cdd:MTH00217 2 LELVFILPLIGILHLLIIPRD--NIVRLKKIALEWSLLTLTATILLWASFDGEGQFQAIKKFEWIPGIEPVFGpvvFAVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 84 GLSIGPILLTGFITTLATLAAW-PITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKK-RL 161
Cdd:MTH00217 80 GISIFFLILTALLTPICILISWnSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREeKV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 162 YSATKFILYTAGGSVFLLMGVLgvALYgSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEA 241
Cdd:MTH00217 160 QASYYFFFYTFIGSVFMLLGIF--TLY-SYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 242 HYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIS 321
Cdd:MTH00217 237 PVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIF 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 322 SLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAElivF 401
Cdd:MTH00217 317 SHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE---F 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 402 FGIITGQKYLLIPKILITFvmaiGMILTPIYSLSMsrqmfYGYKLFNAPKDSFF---DSGPRELFLSISIFLPVIGIGIY 478
Cdd:MTH00217 394 LSLLAAFEYSYIVGVLASL----GMVLSAGYSIYL-----YNRVCFGAPSKYLYfsrDLNRREFYVLLPLVFLIYLMGIF 464
|
....*.
gi 122245642 479 PDFVLS 484
Cdd:MTH00217 465 PFIIID 470
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
80-482 |
1.82e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 181.29 E-value: 1.82e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLT------GFITTLATLAAWPITRdSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLC 153
Cdd:MTH00206 55 LSYDPLSSPLVILScwllplMFLASQNHMKNEPINR-QRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLIT 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 154 MWGGKK-RLYSATKFILYTAGGSVFLLMGVLGVALYGSNEPTLNFETSVNQSYpvvLEIIFYIGFFIAFAVKSPIIPLHT 232
Cdd:MTH00206 134 RWGNQKeRLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTW---NNNLWWLACILAFLVKLPLYGVHL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSH 312
Cdd:MTH00206 211 WLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYF-FIILGLWGSIMTSSICLRQTDLKSLIAYSSVSH 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 313 MGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMS 392
Cdd:MTH00206 290 MSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFP 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 393 GFVAELIVFFGIITGQKYLLipkilitFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPkdSFFDSGPRELFLSISIFLPV 472
Cdd:MTH00206 370 NLFGELLIITSLFSWSNFTL-------PLLGLGFLFTAIYSLYMFVMTQHGKTPNHLL--SLSPSSTREHLLLFLHLFPV 440
|
410
....*....|
gi 122245642 473 IGIGIYPDFV 482
Cdd:MTH00206 441 ILLILNPNLI 450
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-500 |
4.30e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 181.23 E-value: 4.30e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAWPITRD-SRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGK 158
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHrQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 159 KRLYSATKFILYTAGGSVFLLMGVlgVALYGSNEpTLNFETSVNQSYPV-VLEIIFYIgFFIAFAVKSPIIPLHTWLPDT 237
Cdd:PRK08375 153 RALAAARKYLIVGLIGSTFLLIGV--GLLYGVTG-TLNMADLAGALAENpTVVTAFGF-VLLALALKAAVFPLHTWLPRA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 238 HGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW---LMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMG 314
Cdd:PRK08375 229 YPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 315 FIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTmfsSFSMASLALPGM--- 391
Cdd:PRK08375 309 YILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAA---AFAVASLSLIGVppt 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 392 SGFVAELIVFFGIITGQKYLLIpkilitFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPKDsffDSGPRELFLSISIFLP 471
Cdd:PRK08375 386 SGFVSKWYLVVGAVEAGQWLVL------AVLLASSLLALLYFLRIWYRAFFGPPPPGSEAP---KQEAPLGMLAPSLALA 456
|
410 420 430
....*....|....*....|....*....|.
gi 122245642 472 VI--GIGIYPDFVLSLAVDKVEVILSNFFYR 500
Cdd:PRK08375 457 LLslLLGIYAGPLLQLADAAAAGLLGTSAYV 487
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
80-499 |
1.83e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 174.34 E-value: 1.83e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAW-PITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGK 158
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWhSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 159 K-RLYSATKFILYTAGGSVFLLMGVLgvALYGSNEPTlNFETSVNQSY--PVVLEIIFYIGFFIAFAVKSPIIPLHTWLP 235
Cdd:MTH00226 178 EeKMQAAYYFFFYTLIGSVLMLLCLF--SLYNIHGTT-DYLTLASCSHvvSEQTQKWIFLGIFLAMAVKIPIFPFHIWLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGF 315
Cdd:MTH00226 255 KAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 316 IIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFV 395
Cdd:MTH00226 335 VSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFI 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 396 AElivFFGIITGQKYllipKILITFVMAIGMILTPIYSLSMSRQMFYGY--KLFNAPKdsffDSGPRELFLSISIFLPVI 473
Cdd:MTH00226 415 GE---YLSILSSFNW----NPIIGVFVCSGVILSAVYSFYFANRVTFGApgNLITFAR----DVNRREFYITASMVFFAF 483
|
410 420
....*....|....*....|....*.
gi 122245642 474 GIGIYPDFVLslavdkvEVILSNFFY 499
Cdd:MTH00226 484 LIGIYPIFIL-------EVIQNSLFF 502
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
131-413 |
6.40e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 159.40 E-value: 6.40e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 131 SRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSAT-KFILYTAGGSVFLLMGVLGVALYGSnepTLNFETSVNQSYPVVL 209
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGmKYFLLTLLGSSILLFGISLMYNYTG---TLSFDELSKALTGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 210 EIIFYIGF---FIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLMIIGTI 286
Cdd:pfam00361 78 SSGLLLLFlliLVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRR-SLLYLPSSPFIQQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 287 QIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTT-YDRIRLVYLDEMG 365
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSViYRRVHTRNIRDYG 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 122245642 366 GIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIITGQKYLLI 413
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLV 284
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
95-436 |
7.35e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 163.44 E-value: 7.35e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 95 FITTLATLAAwpitrdsrlfhFLMLAmysgqigsFSSRDLLLFFIMWELELIPVYLLLCMWGG-KKRLYSATKFILYTAG 173
Cdd:MTH00124 95 FLTTLILLQT-----------FLILA--------FSATELTLFYIMFEATLIPTLILITRWGNqPERLSAGTYFLFYTLI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 174 GSVFLLMGVLGV-ALYGSNEPTLnFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGI 252
Cdd:MTH00124 156 SSLPLLIAILYLhNQTGTLSLPM-LQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAI 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 253 LLKMGAYGLIRINMELLPHAHSIFSPwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGAL 332
Cdd:MTH00124 235 LLKLGGYGIIRITLLLPPLSNTLHYP-FLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAM 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 333 LQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIvffgIITGQKYLL 412
Cdd:MTH00124 314 ILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELT----IMTSLFNWS 389
|
330 340
....*....|....*....|....
gi 122245642 413 IPKILITfvmAIGMILTPIYSLSM 436
Cdd:MTH00124 390 PTTIILT---GLATLITASYTLYM 410
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
78-435 |
3.68e-44 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 161.68 E-value: 3.68e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 78 WRLGIDGLSIGPILLTGFITTLATLAAWPI-----TRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLL 152
Cdd:MTH00044 55 LSLATDSLSSPLIILSCWLAPLSLLASINHlsnnsPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 153 CMWGGKKRLYSA-TKFILYTAGGSVFLLMGVLGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLH 231
Cdd:MTH00044 135 TRWGAQKERIQAgLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFH 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINmellphahSIFS-PWLMIIGTIQIIY----AASTS---LGQRNLKK 303
Cdd:MTH00044 215 LWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLI--------NLFSlPSANNISFILIVFccwgALITSiicLRQTDLKA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 304 RIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSM 383
Cdd:MTH00044 287 LIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCA 366
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 122245642 384 ASLALPGMSGFVAELIVFFGIITGQkyllipkILITFVMAIGMILTPIYSLS 435
Cdd:MTH00044 367 ANLGLPPLPNLIGELLIISSIISWS-------ILSFPIIGLATVFGAIYSLL 411
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
80-482 |
3.84e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 160.78 E-value: 3.84e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAWP---ITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWG 156
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKsvkLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 157 GK-KRLYSATKFILYTAGGSVFLLMGVLgvaLYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLP 235
Cdd:MTH00150 100 YQpERLQAGMYMMLYTVGASLPLLLVIL---WMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRINMeLLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGF 315
Cdd:MTH00150 177 KAHVEAPVAGSMILAGILLKLGGYGILRMMM-VFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 316 IIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRI--RLVYLdeMGGIASPMPKMFTMFSSFSMASLALPGMSG 393
Cdd:MTH00150 256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVhsRSLFL--SKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 394 FVAELIVFFGIITGQKYLLIPKILITFVMAigmiltpIYSLSMSRQMFYG-YKLFNAPkdsFFDSGPRELFLSISIFLPV 472
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSG-------LYSLYLYTSIQHGgSSSFLKP---FNELKSSEMLLLLLHWVPL 403
|
410
....*....|
gi 122245642 473 IGIGIYPDFV 482
Cdd:MTH00150 404 LLLILKSDLL 413
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
80-436 |
2.23e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 153.92 E-value: 2.23e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAW------PITRdSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLC 153
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQnhlknePINR-QRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIIT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 154 MWGGKK-RLYSATKFILYTAGGSVFLLMGVLGV-ALYGSNEPTLnFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLH 231
Cdd:MTH00068 135 RWGNQEeRLNAGTYFLFYTLAGSLPLLIALLILqNSLGSLSLIL-LELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLH 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVS 311
Cdd:MTH00068 214 LWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYP-FIILALWGVLMTSLICLRQTDLKSLIAYSSVS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 312 HMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGM 391
Cdd:MTH00068 293 HMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPS 372
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 122245642 392 SGFVAELIVFFGIITGQKYLLIpkilitfVMAIGMILTPIYSLSM 436
Cdd:MTH00068 373 PNLWGELTIMVSLFNWSNWTIL-------ITGLGTLITAAYTLYM 410
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
80-436 |
2.31e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 153.96 E-value: 2.31e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLA------AWPITRdSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLC 153
Cdd:MTH00127 57 MATDPLSTPLLVLTCWLLPLMILAsqnhtaPEPINR-QRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIIT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 154 MWGGKK-RLYSATKFILYTAGGSVFLLMGVLGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHT 232
Cdd:MTH00127 136 RWGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSH 312
Cdd:MTH00127 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVSH 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 313 MGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMS 392
Cdd:MTH00127 295 MGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLP 374
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 122245642 393 GFVAELIvffgIITGQKYLLIPKILITfvmAIGMILTPIYSLSM 436
Cdd:MTH00127 375 NLMGELM----IITSLFNWSPWTLALT---GLGTLITAGYSLYM 411
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
68-423 |
3.33e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 150.30 E-value: 3.33e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 68 YKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPITRD---SRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELE 144
Cdd:MTH00163 40 SLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKnnySNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 145 LIPVYLLLCMWGGK-KRLYSATKFILYTAGGSVFLLMGVLgvaLYGSNEPTLNFETSVNQSYpvvLEIIFYIGFFIAFAV 223
Cdd:MTH00163 120 LIPTLFLILGWGYQpERLQAGIYLLFYTLFASLPLLVGIF---YLYNNSGSLSFFLLNFFGS---LNFLWYLSMILAFLV 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 224 KSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKK 303
Cdd:MTH00163 194 KMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKS 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 304 RIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRI--RLVYLDEmgGIASPMPKMFTMFSSF 381
Cdd:MTH00163 273 LIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLgsRSLLINK--GLLNFMPSMSLWWFLL 350
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 122245642 382 SMASLALPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMA 423
Cdd:MTH00163 351 SSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSA 392
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
80-443 |
5.36e-40 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 150.28 E-value: 5.36e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAWPITRDSR---LFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWG 156
Cdd:MTH00014 55 LSSDMLSAPLITLTLWITALMILASFKIFQNNKapkTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWG 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 157 GK-KRLYSATKFILYTAGGSVFLLMGVLGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIGffiAFAVKSPIIPLHTWLP 235
Cdd:MTH00014 135 YQpERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLITIL---AFMVKMPLYTVHLWLP 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRINmELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGF 315
Cdd:MTH00014 212 KAHVEAPVAGSMILAGILLKLGGYGLLRMS-SLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 316 IIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFV 395
Cdd:MTH00014 291 MTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLL 370
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 122245642 396 AELIVFFGIITGQKYLLIPKILITFvmaigmiLTPIYSLSMSRQMFYG 443
Cdd:MTH00014 371 SEIMLLTSILSSSLSTAILLAITSF-------LAAAYSLFLYTSTQHG 411
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-424 |
1.14e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 147.43 E-value: 1.14e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 9 IIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLvedykwinFFDFHWRLGI----DG 84
Cdd:PRK12667 11 ILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYL--------FGGWPAPIGIvyevDL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 85 LSIGPILLTGFITTLATLAAWPITRDSRL---FHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKR- 160
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHESGpewYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDa 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 161 LYSATKFILYTAGGSVFLLMGVlgVALYGSNEpTLNF-------------ETSVNQSYPVVLEIIFYIGFFIAFAVKSPI 227
Cdd:PRK12667 163 VEAAIKYALIGAVGTTLYFLAL--AFLYATFG-TLNMadlsakirglsfpLTGGLAGNPPLALGVALALALWAFTIKAAI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 228 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI------NMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNL 301
Cdd:PRK12667 240 FPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 302 KKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSF 381
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIG 399
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 122245642 382 SMASLALPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAI 424
Cdd:PRK12667 400 ALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISL 442
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
68-424 |
2.80e-36 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 139.73 E-value: 2.80e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 68 YKWINFFdfhwrLGIDGLSIGPILLTGFITTLATLAAWPI---TRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELE 144
Cdd:MTH00205 46 TSFISSS-----FSFDSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 145 LIPVYLLLCMWGGK-KRLYSATKFILYTAGGSVFLLMGVLGVAlygSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAV 223
Cdd:MTH00205 121 LIPTLILILGWGYQpERLQASMYMMMYTLCASLPLLIGLFFLN---SLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLV 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 224 KSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLphahSIFSPWLMIIGTIQIIYAASTS---LGQRN 300
Cdd:MTH00205 198 KLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLY----KLNSNFSELFFSISLWGGVMTGmicLRQVD 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 301 LKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSS 380
Cdd:MTH00205 274 LKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFL 353
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 122245642 381 FSMASLALPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAI 424
Cdd:MTH00205 354 LISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGA 397
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
126-436 |
1.55e-34 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 135.02 E-value: 1.55e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 126 IGSFSSRDLLLFFIMWELELIPVYLLLCMWGGK-KRLYSATKFILYTAGGSVFLLmgvlgVAL--YGSNEPTLNFETSVN 202
Cdd:MTH00110 107 IMTFTATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLL-----VALlyIQNNLGSLNFLLLQL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 203 QSYPVVLE---IIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW 279
Cdd:MTH00110 182 WAQPLPNSwsnNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPF 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 280 LMiIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRI--R 357
Cdd:MTH00110 262 LM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsR 340
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 122245642 358 LVYLDEmgGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVffgIITGQKYLLIPKILitfvMAIGMILTPIYSLSM 436
Cdd:MTH00110 341 TMILAR--GLQTLLPLMATWWLLASLTNLALPPTINLIGELFV---IMSSFSWSNITIIL----MGLNMLITALYSLYM 410
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
114-406 |
9.66e-33 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 131.66 E-value: 9.66e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 114 FHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGVALYGsnep 193
Cdd:PRK08668 100 FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTG---- 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 194 TLNFETSVNQSY--PVVLEIIFYIGFFIAFAV-KSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIrINMELLP 270
Cdd:PRK08668 176 TFDFADISQGLIndTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 271 -----------HAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHG 339
Cdd:PRK08668 255 gtklfsefgtyRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHA 334
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 122245642 340 FIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFsSFSMASLA-LPGMSGFVAELIVFFGIIT 406
Cdd:PRK08668 335 LFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMY-LVAIISLAgIPPMSGFASKWLIFEALIS 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-412 |
5.99e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 125.06 E-value: 5.99e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTII-VVFPIFAGSLIFFLPhkgnRVIRWYTICICILELLlttYAFCYHFQSDDPLIQLVEDykwinfFDFHwrLGIDGL 85
Cdd:PRK07234 4 LTPVwIALPFLLGFAIYLLP----KLDRNLALGMAIVSAV---YALGLVASMVPLELTLLDN------FGVT--LRADAL 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 86 SIGPILLTGFITTLATLAAWPiTRDSRLFHFLmLAMYSGQIGS-FSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSA 164
Cdd:PRK07234 69 SGYFILTNALVTLAVIFYCWE-SAKTRFFYAQ-LLILHGSVNAaFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 165 TKFILYTAGGSVFLLMGVlgVALYGSNEpTLNFeTSVNQSYPVVLEIIFyigffIAFAVKSPIIPLHTWLPDTHGEAHYS 244
Cdd:PRK07234 147 LRYLFYSNVAMLFYLIGA--VLVYQANG-TFAF-SGLATADPEAFALIA-----LGLLVKGGIFVSGLWLPLTHSEAEPP 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 245 TCMLLAGILLKMGAYGLIRinmelLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGisslt 324
Cdd:PRK07234 218 VSALLSGVVVKAGVFPLVR-----CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA----- 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 325 dtGLNGALLQiISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPkmFTMfSSFSMAslALPGMSGFVAELIVFFGI 404
Cdd:PRK07234 288 --PLVGGLYA-LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP--LTM-ASFSIA--GFPLLAGFVSKVLTLKNL 359
|
....*...
gi 122245642 405 ITGQKYLL 412
Cdd:PRK07234 360 LPWQAIAL 367
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
82-486 |
2.06e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 123.30 E-value: 2.06e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 82 IDGLSIGPILLTGFITTLATLAAWPITRDSRLFHF----LMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGG 157
Cdd:COG1007 68 VDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGefyaLLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 158 KKR-LYSATKFILYTAGGSVFLLMGVlgVALYGS------NEPTLNFETSVNQSYPVVLEIIFyigFFIAFAVKSPIIPL 230
Cdd:COG1007 148 DRRsSEAALKYFLLGALSSGFLLYGI--SLLYGAtgslnlAGIAAALAAGGANSPLLLLGLVL---VLAGLAFKLSAVPF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSV 310
Cdd:COG1007 223 HMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 311 SHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALF-FLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFsSFSMASLA-L 388
Cdd:COG1007 303 AHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAM-TIFLLSLAgI 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 389 PGMSGFVAELIVFFGIITGQKYLLipkiliTFVMAIGMILTPIYSLSMSRQMFygyklFNAPKDSFFDSGPRELFLSISI 468
Cdd:COG1007 382 PPTAGFFGKFYVFSAAVEAGLYWL------AVIAVLNSVISAYYYLRVVKAMY-----FDEPEEEAPISAPPGLRVALVI 450
|
410
....*....|....*....
gi 122245642 469 F-LPVIGIGIYPDFVLSLA 486
Cdd:COG1007 451 AaLLVLLLGIFPGPLLDLA 469
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
6-494 |
6.01e-29 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 119.67 E-value: 6.01e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 6 WLTII-VVFPIFAGSLIFFLPHKgNRVIRWYTICICILeLLLTTYAFCYHFQSDDPLIqlvedykwINFFDFHWRLGI-- 82
Cdd:PRK12663 4 NLLILpMLLPLLCGLVLVFLRNR-DRLQRYLAIGTLTI-LTLISLALLIYVQRHGPIT--------LDFGGWLPPFGIqf 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 83 --DGLSIGPILLTGFITTLATLAAWP-ITRDSRLFHF--LMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGG 157
Cdd:PRK12663 74 tgDSLSALMVTTASFVATAIMAYGFGdIEHSGRRYGFppFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 158 KKRLYSATKFILYTAGGSVFLLMGVlgVALYGSNEpTLNFE------TSVNQSYPVvleIIFYIGFFIAFAVKSPIIPLH 231
Cdd:PRK12663 154 REQLRGAIKYVVLNLIGSWLFLLGI--GLLYGTFG-TLNMAhiamrlNDMGDTATL---TTIALLFLLAFGMKAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 232 tWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVS 311
Cdd:PRK12663 228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 312 HMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGM 391
Cdd:PRK12663 307 SIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPF 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 392 SGFVAELIVFFGIITGQKYLLIPKILITFVMAIgmiltpiysLSMSRQMFYGYKLFNAPKDSFFDSGPRELFLSISIF-L 470
Cdd:PRK12663 387 SGFWGKVLLVQGALDNGAYILLALMLITSLITM---------YSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILaV 457
|
490 500
....*....|....*....|....
gi 122245642 471 PVIGIGIYPDFVLSLAVDKVEVIL 494
Cdd:PRK12663 458 VVIAMGIAAEPLLNLTQDAAEGLL 481
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-443 |
1.20e-28 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 119.49 E-value: 1.20e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 6 WLTIIVVFPIFAGSLIFFLPHK-GNRVIRWYTICICILELLLTTYAFcYHFQSDDPLIQLvedYKWINFFDFHWRLG--I 82
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRlGRRAAGWLAALAPLAAFVLSLLLF-PAVLGGEVVVEL---YTWIPVGSLGLDFGfrL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 83 DGLSIGPILLTGFITTLATL-AAWPITRDSRL--FHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKK 159
Cdd:COG1009 79 DGLSLLMLLLVTGVGLLVHIySIGYMSGDPGLarFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 160 R-LYSATKFILYTAGGSVFLLMGVLGVALYGSnepTLNFETsVNQSYPVVLEIIFY----IGFFIAFAVKSPIIPLHTWL 234
Cdd:COG1009 159 SaRRAARKAFLVTRVGDLGLLLGILLLGAIAG---TLNFSE-LLAAAPTILSSPLLtlilLLLLLGAFGKSAQFPLHFWL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 235 PDTHgEA--------HYSTcMLLAGILLkmgaygLIRIN--MELLPHAHSIfspwLMIIGTIQIIYAASTSLGQRNLKKR 304
Cdd:COG1009 235 PDAM-EGptpvsallHAAT-MVKAGVYL------LARLSplFALSPVWLTV----VAIIGAITALFAALIALAQTDIKRV 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 305 IAYSSVSHMGFIIIGIssltdtGLNG---ALLQIISHGFIGAALFFLAG----TTYDRirlvYLDEMGGIASPMPKMFTM 377
Cdd:COG1009 303 LAYSTVSQLGYMFLAL------GVGAyvaALFHLLTHAFFKALLFLGAGsvihATGTR----DIRKMGGLRKKMPITAIT 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 122245642 378 F--SSFSMAslALPGMSGFVAELIVFFGIITGQKYllipKILITFVMAIGMILTPIYSLSMSRQMFYG 443
Cdd:COG1009 373 FliGALSLA--GIPPFAGFFSKEAILEAALEAGGL----GPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-419 |
7.43e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 110.42 E-value: 7.43e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 1 MNYFPWLTIIVvfPIFAGSLIFFLPhKGNRVIRWYTICICILELLLTTYAFCYHFQSDdplIQLVEDYKWINFFDFhwRL 80
Cdd:PRK07691 2 MNNLVILPILI--PVITAILLIFLG-KRPIIQRYVALIGSLLTLVAAIILVANVYKHG---IQTLELGNWKAPFGI--VF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 81 GIDGLSIGPILLTGFITTLATLAAWP---ITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGG 157
Cdd:PRK07691 74 VADMFAALLVLTSSIITFLVILYSFQtigIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGT 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 158 KKRLYSATKFILYTAGGSVFLLMGVlgvALYGSNEPTLNF--------ETSVNQSYpvVLEIIFYIgFFIAFAVKSPIIP 229
Cdd:PRK07691 154 KIQLRESIKYVLINVVSSAFFVVAV---AILYSVVGTLNMadisvkiaELSAGQTG--LITVVAIL-FLFVFATKAGLFP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 230 LHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSS 309
Cdd:PRK07691 228 LYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNI 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 310 VSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFsSFSMASLA-L 388
Cdd:PRK07691 308 MIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMF-FIAALSLAgI 386
|
410 420 430
....*....|....*....|....*....|.
gi 122245642 389 PGMSGFVAELIVFFGIITGQKYLLIPKILIT 419
Cdd:PRK07691 387 PPLSGFYGKFFIVEGTFEAGFYVSGIIVLLS 417
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-484 |
3.14e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 108.65 E-value: 3.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 82 IDGLSIGPILLTGFITTLATLAAWP-ITRDSRL--FHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWggK 158
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISyMKHDTGLdkYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR--N 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 159 KRLYSATKFILYTAGGSVFLLMGVLGVA-LYGS-NEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPD 236
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIAlLYGQyGTLNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 237 THGEAHYS-TCMLLagILLKMGAYGLIRINMELL-PHAHSIFSPWLMII-GTIQIIYAASTSLGQRNLKKRIAYSSVSHM 313
Cdd:PRK08376 246 AYPAAPSSiSAMLL--VIKQAGLYALARVLFSIYgPAINLATVGWVIIIlGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 314 GFIIIGI------------SSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSF 381
Cdd:PRK08376 324 GYMLLGLgvglaalgdpamASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIG 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 382 SMASLALPGMSGFVAELIVFfgiitgQKYLLIPKILITFVMaIGMILTPIYSLSMSRQMFYGYKLfnaPKDSFFDSGPRE 461
Cdd:PRK08376 404 AAAIVGLPPFNGFASKWLIY------ESSALFNPILGVIAM-IGSVLTLASFVKVFHTAFFGPPS---EKVMNVKEPPKP 473
|
410 420
....*....|....*....|....
gi 122245642 462 LFLSISIF-LPVIGIGIYPDFVLS 484
Cdd:PRK08376 474 MLVPMLILaIAIIGMGLFPWQISD 497
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
73-402 |
8.37e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 107.15 E-value: 8.37e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 73 FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPIT-----------RDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMW 141
Cdd:PRK08676 52 YFMESRYLFIDHLGIFVVLIASVVFILAALYARGYVdhllsngeldpENLKVFYLGFNLLLSVITFAFFSDNLALFWIFA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 142 ELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVL---GVALYGSNEPTLNFETSVNQS--YPVVLEIIFYIG 216
Cdd:PRK08676 132 ELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIflfSLTRQALGTGTLNWTELAAHAslLSPSVLGASFLF 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 217 FFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELL-PHAHSIFSPWLMIIGTIQIIYAASTS 295
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRqSGAAEQFSNVLIGLGIFSIAVAAFSM 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 296 LGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMF 375
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
330 340
....*....|....*....|....*..
gi 122245642 376 TmfsSFSMASLALPGMSGFVAELIVFF 402
Cdd:PRK08676 372 W---GVILGSAAIIGMPPFPLFLSKFF 395
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-434 |
6.58e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 104.51 E-value: 6.58e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 68 YKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAW------PITRDSRLFHFLMLAMYSGQIGSFSSrDLLLFFIMW 141
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPkylainNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 142 ELELIPVYLLL-------CMWGGKKRLysatKFILYTAggsvfLLMGVLGVALYGSNEPTLNFET----SVNQSYPVVLE 210
Cdd:PRK06589 146 ELLTISTAFLIghtrnniSLSGGYKYL----KILMISA-----LLLFLPAVILIYTKTGNLDFVSgglfSKNQSIILLLM 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 211 IIFYIGffiafavKSPIIPLHTWLPdTHGEAHYSTCMLL-AGILLKMGAYGLIRINMEL--LPHAHSIF--SPWLMIIGT 285
Cdd:PRK06589 217 FIYGIA-------KTAIFPVHSWLP-AAMVAHYPVSALLhAVIVVKTGLFCIYKILLYIfgLSYLQRIFaeFNWLIFIPI 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 286 IQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMG 365
Cdd:PRK06589 289 VSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLH 368
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 122245642 366 GIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIitGQKYLLIPKILITFVMAIGMILTPIYSL 434
Cdd:PRK06589 369 GTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAA--SEQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
68-486 |
6.94e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 104.13 E-value: 6.94e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 68 YKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPITRDSRLFHFLMLAMYS--GQIGSFSSRDLLLFFIMWELEL 145
Cdd:PRK05777 57 GAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFAllGMMVMVSANDLLTLFLGLELLS 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 146 IPVYLLlCMWGGKKRLYS--ATKFILYTAGGSVFLLMGVlgVALYGSNEpTLNFE---TSVNQSYPVVLEIIFYIGFFIA 220
Cdd:PRK05777 137 LPLYAL-AALRRDRRRSLeaAIKYFVLGALASGFLLYGM--SLLYGATG-SLSFAgiaKALADGSGNSLLLLFGLVFLLV 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 221 -FAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILlKMGAYG-LIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQ 298
Cdd:PRK05777 213 gLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQ 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 299 RNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALF-FLAGTTYDRIRLVYLDEMGGIASPMPKMFTM 377
Cdd:PRK05777 292 TNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFAGLSKRSPLLAAV 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 378 FSSFsMASLA-LPGMSGFVAELIVFFGIITGQKYLLipkiliTFVMAIGMILTPIYSLSMSRQMFygyklFNAPKDSFFD 456
Cdd:PRK05777 372 MTIF-MLSLAgIPPTAGFWGKFYVFEAAVEAGLWWL------AVIGVLNSAIGAFYYLRVIKLMY-----FDEPPRDAPV 439
|
410 420 430
....*....|....*....|....*....|..
gi 122245642 457 SGP-RELFLSISIF-LPVIGIGIYPDFVLSLA 486
Cdd:PRK05777 440 NWPlSAGGAVLSVSaLLVLVLGIFPQPLLDLA 471
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-427 |
1.12e-23 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 103.86 E-value: 1.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPIFAGSLIFFLPHKgnRVIRWYTICICILELLLTTYAFCYHFQSDdpliqlvedykwiNFFDFHWRLGIDGLS 86
Cdd:PRK06458 7 FALLLLIPLLASLLLFALRKR--RLVATLNVLGITLTLILALWLVFTVPDAG-------------EIFAAGLWFFIDDLN 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 87 IGPILLTGFITTLATL----------AAWPITRDS-RLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMW 155
Cdd:PRK06458 72 VFFLALIGVVGFLTSLysigymrhevEHGELSPVTlRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 156 GGKKRLYSATKFILYTAGGSVFLLMGVlgVALYGSNEPTLN------FETSVNQSYPVVLEIIFYIGF---FIAFAVKSP 226
Cdd:PRK06458 152 RTRASLEAAWKYIIICSVGVAFALFGT--ILVYANAATVMGdgemaiLWTELLKHASLLDPTLMKLAFvflLIGFGTKVG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 227 IIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMII-GTIQIIYAASTSLGQRNLKKRI 305
Cdd:PRK06458 230 LFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfGLLSVLVAAFFLLRQRDIKRLF 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 306 AYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMAS 385
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAI 389
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 122245642 386 LALPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAIGMI 427
Cdd:PRK06458 390 AGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAAL 431
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
8-486 |
1.24e-22 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 100.61 E-value: 1.24e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 8 TIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYK---WINFFDFHWRlgidG 84
Cdd:PRK08377 6 SLLIALPLISAFFVPVIKGIGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPIIIMAGGWKppvGINLYIGPFA----A 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 85 LSIGPILLTGFITTLATLAAW---PITRDSRLFHFLMLamysGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRL 161
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLKAVevePIDKYAMLFLLLML----GATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 162 YSATKFILYTAGGSVFLLmgvLGVALYGSNEPTLN---FETSVNQSYPVVLEIIFYIGFFiAFAVKSPIIPLHTWLPDTH 238
Cdd:PRK08377 158 EASMKYIVLGGIGSSFFL---IGVALIYGATGTLNmahIAQLAGTIDPTVAQVGLALLIF-GLAVEAELFPLNAWAPDAY 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 239 GEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSI--FSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFI 316
Cdd:PRK08377 234 QAAPHPITVMFSAFVVKAGLYAMARI-LYLMQNANGWssVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 317 IIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVA 396
Cdd:PRK08377 313 ALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWS 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 397 ELIVFFGIITGQKYLLIPKILITFVMAIgmiltpIYSLSMSRQMFYGYKLFNAPKDSFfdSGPRELFLSISIflpvIGIG 476
Cdd:PRK08377 393 KFRIILAGLSAGYTWPVALVLGASVVEA------VYYFRLIHTMWFKGEGERIRENAA--IGIILLLLAALI----VVIG 460
|
490
....*....|
gi 122245642 477 IYPDFVLSLA 486
Cdd:PRK08377 461 IYPTPFWEVV 470
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-397 |
1.47e-21 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 98.04 E-value: 1.47e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 1 MNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYKWInffdfHWRL 80
Cdd:PRK06521 2 MLALQLLLLSLLLYLALGLAGLLLLRRPRLAIRLSGPTGLLGGLLGLASGLTALFAGPTLAAVLPLGLPFL-----PFHL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 81 GIDGLSIGPILLTGFITTLATLAAWPITRDS-----RLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMW 155
Cdd:PRK06521 77 RLDALSAFFLLVISLLGAAASLYSLGYFREYegkgpGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIAN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 156 GGKKRLYSAtkfilytagGSVFLLMGVLGVA-------LYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPII 228
Cdd:PRK06521 157 HREAEIRRA---------GFLYLLMAHAGALaillafgLLARESGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLV 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 229 PLHTWLPDTHGEA--HYSTcmLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIA 306
Cdd:PRK06521 228 PLHVWLPRAHPAApsHVSA--LMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLA 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 307 YSSVSHMGFIIIGI-----------SSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMF 375
Cdd:PRK06521 306 YSTIENIGIIFVGLglamvfiaygmPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTA 385
|
410 420
....*....|....*....|..
gi 122245642 376 TMFSSFSMASLALPGMSGFVAE 397
Cdd:PRK06521 386 WAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
15-396 |
5.69e-21 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 96.12 E-value: 5.69e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 15 IFAGSLIFFLPHkgnRVIRWYTICICILELLLTTYAfcyhfqsddpliqLVEDYKWINFFDFHWRLG-IDGLSIGPILLT 93
Cdd:PRK12668 13 IAGALLVPFLPG---RARKALLLLAPVLAVLAVLTV-------------PEGTYLTVTFLGFDLVLGrVDKLSRVFGLIF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 94 GFITTLATLAAWPITRDSRlfHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAG 173
Cdd:PRK12668 77 GIMAFIGVIYALHVKDPGQ--HVAALLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 174 GSVFLLMGVLgvaLYGSNEPTLNFETSVNQSYPVVLEIifyigfFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGIL 253
Cdd:PRK12668 155 GGVLLLAGIL---LHYAETGSFAFGAIAGLGGTAAWLI------LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFT 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 254 LKMGAYGLIRinmeLLPHAHsifspWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALL 333
Cdd:PRK12668 226 TKTAVYALAR----AFPGTE-----LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVA 296
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 122245642 334 QIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPK--MFTMFSSFSMAslALPGMSGFVA 396
Cdd:PRK12668 297 HAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLtaLFCLVGALSIS--AFPLFSGFVS 359
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
137-401 |
5.98e-21 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 96.34 E-value: 5.98e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 137 FFIMWEL-ELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGVALYgsnepTLNFETSVNqSYPVVLEIIFYI 215
Cdd:PRK08667 136 FLFFWEImALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQ-----TGSFELSPL-GASAGILSLVFL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 216 GFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMellphahSIFSP---WLMII---GTIQII 289
Cdd:PRK08667 210 LLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLM-------DVLSPelwWGVLIllaGSISAL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 290 YAASTSLGQRNLKKRIAYSSVSHMGFIIIGI-----------SSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRL 358
Cdd:PRK08667 283 LGVIYALKEHDLKGLLAYSSIENIGIILMGIglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT 362
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 122245642 359 VYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVF 401
Cdd:PRK08667 363 RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-401 |
4.75e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 93.11 E-value: 4.75e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 114 FH--FLMLAMysGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLmgvLGVALYGSN 191
Cdd:PRK12665 113 FLptYLILVA--GVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFL---IGIALVYAA 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 192 EPTLNF-ETSVN-QSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELL 269
Cdd:PRK12665 188 TGTLNMaDLAVRlDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 270 PHAHsiFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLA 349
Cdd:PRK12665 268 PGGG--LDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVV 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 122245642 350 GTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVF 401
Cdd:PRK12665 346 GLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-425 |
1.66e-19 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 91.19 E-value: 1.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 106 PITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGV-LG 184
Cdd:PRK06525 107 PVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAaTL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 185 VALYGSneptlnFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI 264
Cdd:PRK06525 187 FLQTGT------FALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 265 NMELLPHAHSIFspWLM-IIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSL---TDTGLNGALLQIISHGF 340
Cdd:PRK06525 261 IQSMGPIPHVIG--YVGaVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAF 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 341 IGAALFFLAGTtydrirLVY------LDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFG--IITGQKYLL 412
Cdd:PRK06525 339 AKSLFFLVAGA------LSYscgtrlLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAgfELSVEYWIL 412
|
330
....*....|...
gi 122245642 413 IPKILITFVMAIG 425
Cdd:PRK06525 413 LPAMVLLLIESVA 425
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
64-434 |
3.74e-19 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 90.87 E-value: 3.74e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 64 LVEDYKWI-----NFFDFHWRLGIDGLSIGPILLTGFI--TTLATLAAW-PITRDSRLFHFLMLAMYSGQIGSFSSRDLL 135
Cdd:PRK12650 54 LTWSVTWIpdllgNGVDVNLALRADALSLFFALLALVIgaVVFIYSARYlPRKKGNTSFYLLMTAFMAAMLLLVLADDVV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 136 LFFIMWELELIPVYLLLCMWGGKKRLySATKFILYTAGGSVFLLMGV-LGVALYGSNEPTLNFETSVNQSYPVVLEIIfy 214
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLAAVaIAATQTGTTSLSGILHSDVWAEKPGLTTVV-- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 215 iGFFIAFAV--KSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMelLPHAHSIFSPWLMIIGTIQIIYAA 292
Cdd:PRK12650 211 -AVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP--VFHDVAVWNWLLIIVGMITALMGA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 293 STSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGT------TYDRIRLvyldemGG 366
Cdd:PRK12650 288 VFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVvdhqagTRDIRRL------GS 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 122245642 367 IASPMPKMFTM--FSSFSMAslALPGMSGFVAELivffGIITGQKYLLIPK---ILITFVMAIGMILTPIYSL 434
Cdd:PRK12650 362 LWRRMPFTFVSvtIAALSMA--AVPPLFGFVSKE----GMLTAFLEAPGGNagvVLLLVGAALGAVFTFAYSA 428
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-442 |
6.57e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 89.41 E-value: 6.57e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAWPITRDS------RLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLC 153
Cdd:PRK12662 72 LRVDILSATMLVLVNFIAVMSVLYGIYPNRKEisvnkiPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 154 MWGGKKRLYSATKFILYTAGGSVFLLmgvLGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIG---FFIAFAVKSPIIPL 230
Cdd:PRK12662 152 MGRDKKALVAAFEYLIIGTIGATFYL---IGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGvlfIMVGLFIKAALFPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLpHAHSI-----FSPWLMIIGTIQIIYAASTSLGQRNLKKRI 305
Cdd:PRK12662 229 HKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVF-KANFVfttlpFNNVFMILAALAIVFGSVLAILSKDIKRIF 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 306 AYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMAS 385
Cdd:PRK12662 308 AYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSL 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 122245642 386 LALPGMSGFVAELIVFFGIITGQKYLLIpkilitFVMAIGMILTPIYSLSMSRQMFY 442
Cdd:PRK12662 388 IGMPPTSGFVAKWYILDAFIKSNAWIGL------VVLLVGSGLSVIYVWKIVEALYF 438
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
7-443 |
4.38e-18 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 87.34 E-value: 4.38e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPiFAGSLI--FFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYKWINF--FDFHWRLGI 82
Cdd:TIGR01974 3 IFLIVFLP-LIGFLIagLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVggFQVDFGLRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 83 DGLSIGPILLTGFITTLATLAAWPITRD----SRLFHFLMLAMYSgQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGgK 158
Cdd:TIGR01974 82 DGLSLTMLVVVTGVGSLVHIYSIGYMAHdegySRFFAYLNLFTFS-MLMLVLADNFLQLFFGWEGVGLCSYLLIGFWY-K 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 159 KRLYS--ATKFILYTAGGSVFLLMGVLGV-ALYGsnepTLNFETSVNQSYPVVLEIIFYIG--FFIAFAVKSPIIPLHTW 233
Cdd:TIGR01974 160 KPSANnaAIKAFVVNRVGDFGLLLGIFLIfWYFG----TLNFQEVFALAPGAFFSALTLICllLFIGAMGKSAQLPLHTW 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 234 LPD-----THGEA--HYSTcMLLAGILLKMGAYGLirinMELLPHAHSifspWLMIIGTIQIIYAASTSLGQRNLKKRIA 306
Cdd:TIGR01974 236 LPDamegpTPVSAliHAAT-MVTAGVYLVARTSPL----FELSPTALY----LVTIIGAITALFAATVALVQNDIKRILA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 307 YSSVSHMG--FIIIGISsltdtGLNGALLQIISHGFIGAALFFLAGTTydrIRLVYLDE----MGGIASPMPKMFTMFSS 380
Cdd:TIGR01974 307 YSTMSQLGymFLALGVG-----AYAAAIFHLMTHAFFKALLFLGAGSV---IHAMHHEQdirkMGGLRKKMPVTYITFLI 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 122245642 381 FSMASLALPGMSGFVA-ELIVFFGIITGQKYLLIpkilitFVMAIGMILTPIYSLSMSRQMFYG 443
Cdd:TIGR01974 379 GSLALIGFPGFAGFFSkDLILEAAFASGTHSFLF------VAGLIGAFLTAFYSFRLIFMVFHG 436
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-426 |
4.63e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 83.75 E-value: 4.63e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 83 DGLSIGPILLTGFITTLATLAAwpITRDSR-------LFHFLMLamysGQIGSFSSRDLLLFFIMWELELIPVYLLLCMW 155
Cdd:PRK12666 79 DRLSALMLLLTALLALAALLYA--LAGWDRagphfhaLFQFQLM----GLNGAFLTGDLFNLFVFFEVLLAASYGLLLHG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 156 GGKKRLYSATKFILYTAGGSVFLLMGVlgVALYGSNEpTLNFE------TSVNQSYPVVLEIIFYIgFFIAFAVKSPIIP 229
Cdd:PRK12666 153 SGRARVRAGLHYVAINLVASSLFLIGV--GLIYGVTG-TLNMAdlaqriAQLPAADRALLEAGAAL-LLVVFLIKAAMWP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 230 LHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLIRINMELLPHA----HSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRI 305
Cdd:PRK12666 229 LNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEagasAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLA 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 306 AYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLA-------GTTYDRIRLV--------YLDEMGGIASP 370
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLAdlverqrGAAADRLAVTpelydldeEEEEEVGVAIP 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 122245642 371 MPKMFTMFsSFSMASLALPGM---SGFVAELIVFFGII----TGQKYLLIPKILIT-FVMAIGM 426
Cdd:PRK12666 388 ATMALLGL-LFFICALALAGLpplSGFLGKFALLQALLnppgAGAAWWLWALVLLSgLAALIAL 450
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
8-443 |
8.28e-17 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 83.65 E-value: 8.28e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 8 TIIVVFPIFAGSLIfflphkgNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQLVEDYKWINFFDFHWRLGIDGLSI 87
Cdd:PRK12646 9 AILVIMAMILLTSK-------RRALAKYAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 88 GPILLTGFITTLATLAA---WPITRDS--RLFHFLMLAMYSgQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKK-RL 161
Cdd:PRK12646 82 MFSLIISLIGIAVFFYAtqyLSSRKDNlpRFYFYLTLFMFS-MIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGdSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 162 YSATKFILYTAGGSVFLLMG-VLGVALYGSNEPT-LNFETSVNQSYPVVLEIIFYigFFIAFAVKSPIIPLHTWLPDTHG 239
Cdd:PRK12646 161 FGAIQSFMITVFGGLALLVGfIMLYIMTGTNNITeILGQADHIKNHGLFIPMIFM--FLLGAFTKSAQFPFHIWLPRAMA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 240 EAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSpwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIII- 318
Cdd:PRK12646 239 APTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYI--VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAm 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 319 -------------GISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMAS 385
Cdd:PRK12646 317 vgigggyaqhqqdAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSM 396
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 122245642 386 LALPGMSGFVAELIVFFGIITG---QKYLLIPKILITFVMAIGMILTPIYSLSMSRQMFYG 443
Cdd:PRK12646 397 AGVPFLNGFLSKEMFLDALTQTgqlSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWG 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
39-401 |
5.42e-16 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 80.77 E-value: 5.42e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 39 ICILELLLTTYAFCYHFQSDDPLIQlVEDYKWIN--FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPITRDS----- 111
Cdd:MTH00032 34 ICMGSSTLIALFLAYEVLINDAVVH-IELYKWIEseIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDphvpr 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 112 -----RLFHFLMLAMysgqigsFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRL-YSATKFILYTAGGSVFLLMGV--- 182
Cdd:MTH00032 113 flcylSLFTFLMMVL-------VTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQAnKAAIKAIVVNRVGDVGVILGMvli 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 183 -----------LGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAG 251
Cdd:MTH00032 186 yktigsldfltFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAA 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 252 ILLKMGAYGLIRIN--MELLPHAHSIFSpwlmIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGF--IIIGISSLTDTG 327
Cdd:MTH00032 266 TMVTAGVFLMIRSFplFEKAPLTLLIIT----IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYmvLIIGIEGSHNVG 341
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 122245642 328 lngaLLQIISHGFIGAALFFLAGTTYDRIRLVYLD--EMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVF 401
Cdd:MTH00032 342 ----LFHLVNHAFFKALLFLSAGSVIHSTTVDEQDmrKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-445 |
1.18e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 79.87 E-value: 1.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 111 SRLFHFLMLAMYSgQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGK-KRLYSATKFILYTAGGSVFLLMGVLGV-ALY 188
Cdd:PRK12649 111 PRYYQYLLLFMGS-MIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRpESVYGATKSLLITAGGGLFMFAGFLLLhVIT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 189 GSNE--PTLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInm 266
Cdd:PRK12649 190 GTYDiaTILQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARI-- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 267 ellphaHSIFS---PWLMII---GTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIII--GISSLTDTGLN--GALLQII 336
Cdd:PRK12649 268 ------HPIFSgteAWFILVsgtGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTmyGYTTYHEPGLGvaAATFHLL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 337 SHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVA-ELIVFFGIITGQKYLLIPK 415
Cdd:PRK12649 342 NHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSkEMFYETSVEMGALIGGPFT 421
|
330 340 350
....*....|....*....|....*....|
gi 122245642 416 ILITFVMAIGMILTPIYSLSMSRQMFYGYK 445
Cdd:PRK12649 422 IIIPAVAVLGGVFTFAYSIKLIDGIFLGER 451
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
219-451 |
4.20e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 77.95 E-value: 4.20e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 219 IAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMeLLPHAHSIFSPWLMIIGTIQIIYAASTSLGQ 298
Cdd:PRK08042 188 IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALME 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 299 RNLKKRIAYSSVSHMGFIIIGI-----------SSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGI 367
Cdd:PRK08042 267 HNIQRLLAYHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGI 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 368 ASPMPKMFTMFSSFSMASLALPGMSGFVAELIV---FFGIitGQKYLLIPKILITfVMAIGMILTPIYSLsMSRQMFYGY 444
Cdd:PRK08042 347 GKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsFFKL--SNSGAFVARLLGP-LLAVGLAITGALAV-MCMAKVYGV 422
|
....*..
gi 122245642 445 KLFNAPK 451
Cdd:PRK08042 423 TFLGAPR 429
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
129-421 |
4.55e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 76.87 E-value: 4.55e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 129 FSSRDLLLFFIMWELELIPVYLLLCMWGGK-KRLYSATKFILYTAggsvFLLMGVLGVALYGSNEPTLNFetsvnqsYPV 207
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQiEKINSSYYLLFYAA----FFSFPFLFVYLKNFFFFSLCY-------FDF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 208 VLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInmelLPHAHSIFSPWLMIIGTIQ 287
Cdd:MTH00094 148 FLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI----LGSLNFVYNNFWIIFSLLG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTY--DRIRLVYLdeMG 365
Cdd:MTH00094 224 MILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYhiSKSRLIYF--MN 301
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 122245642 366 GIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIITGQKYLLIPKILITFV 421
Cdd:MTH00094 302 SFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLV 357
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
130-483 |
4.85e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 77.30 E-value: 4.85e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 130 SSRDLLLFFIMWELELIPVYLLLCMWGGKKR-LYSATKFILYTAGGSVFLLMGVlgVALYGSNEpTLNFETSVNQSYPVV 208
Cdd:TIGR01770 120 SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFsTEAGLKYFILGAFSSGLLLFGI--SLIYGFTG-SLNFEDLLLFLSNGM 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 209 LEIIFY----IGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIG 284
Cdd:TIGR01770 197 LNISLLllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 285 TIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALF--FLAGTTYDRIRLVYLD 362
Cdd:TIGR01770 277 FLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgvLSLLRSYKDEWIEYIS 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 363 EMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAIGmiltpiYSLSMSRQMFY 442
Cdd:TIGR01770 357 DFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF------YYLRVVKVMYF 430
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 122245642 443 GyklfNAPKDSFFDSGPRELFLSISIF-LPVIGIGIYPDFVL 483
Cdd:TIGR01770 431 D----KPERRIPSNPQSKAQSLLLSISaLFILFLGLFPSLIL 468
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
113-434 |
6.41e-14 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 74.34 E-value: 6.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 113 LFHFLMLAMysgqigsFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRL-YSATKFILYTAGGSVFLLMGVLGV-ALYGS 190
Cdd:MTH00020 119 LFTFLMVVL-------VTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEAnKAAIKAMLVNRVGDIGLLLAMFLLwDRFGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 191 neptLNFETSVNQSYPVVLEIIFYIGFFIAFAV--KSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN--M 266
Cdd:MTH00020 192 ----LDFSSVFNMVVSAPSSDITLICLFLFIGAvgKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 267 ELLPHAHSIFSpwlmIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIII--GISSLTDtglngALLQIISHGFIGAA 344
Cdd:MTH00020 268 EQAPLALIIVT----IVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVacGLSHYSI-----SLFHLMNHAFFKAL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 345 LFFLAGTtydrIRLVYLDE-----MGGIASPMPKMFTMFSSFSMASLALPGMSGFVA-ELIVFFGIitGQKYLlipkILI 418
Cdd:MTH00020 339 LFLSAGS----VIHALSDEqdmrkMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELAF--GQYYL----IFA 408
|
330
....*....|....*.
gi 122245642 419 TFVMAIGMILTPIYSL 434
Cdd:MTH00020 409 YWLGCFSALLTAFYSI 424
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-399 |
6.91e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 74.19 E-value: 6.91e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 64 LVEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPITRD----SRLFHFLMLAMYSgQIGSFSSRDLLLFFI 139
Cdd:PRK12647 44 VRGGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGhpdlGRFYSYILLFMAS-MLGLVLSDNLITLFV 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 140 MWELELIPVYLLLCMWGGKKRLY-SATKFILYTAGGSVFLLMGVLGVA-LYGSNEPT--LNFETSVNQS--YPVVLeIIF 213
Cdd:PRK12647 123 FWELTSITSFLLIGFNHEREAARrAALQALLVTGGGGLALLAGLILLGnVTGTYSLSelLASGDVIREHplYLAIL-LLV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 214 YIGFFiafaVKSPIIPLHTWLPD-----THGEAH-YSTCMLLAGIllkmgaYGLIRINMELlpHAHSIFSPWLMIIGTIQ 287
Cdd:PRK12647 202 LGGAF----TKSAQFPFHFWLPNameapTPVSAYlHSATMVKAGI------YLLARLNPVL--GGTPLWQTILPLFGGLT 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGT------TYDRIRLvyl 361
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIidhetgTRDITKL--- 346
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 122245642 362 demGGIASPMPK--MFTMFSSFSMAslALPGMSGFVA-ELI 399
Cdd:PRK12647 347 ---GGLRRAMPItaAAALLAALSMA--GLPPLFGFLAkELI 382
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-434 |
1.20e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 70.34 E-value: 1.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 63 QLVEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATL--AAWPITRDSRLFHF--LMLAMYSGQIGSFSSRDLLLFF 138
Cdd:PRK12644 53 APTEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLycARYFDDDEPRLGRFaaELVAFAGAMFGLVTSDNLLLLY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 139 IMWELELIPVYLLLCMWGGKKR-LYSATKFILYTAGGSVFLLMG--VLGVA--LYGSNEPTLNFETSVNQSYPVVLeiif 213
Cdd:PRK12644 133 VFWELTTVLSFLLIGHYAERAAsRRAALQALLVTTAGGLAMLVGiiILGQAagTYRLSELLADPPTGPAVSVAVVL---- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 214 yigFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRinmeLLPHAHSIfSPWLMII---GTIQIIY 290
Cdd:PRK12644 209 ---ILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVAR----LAPGFADV-PVWRPTVlvlGLATMLL 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 291 AASTSLGQRNLKKRIAYSSVSHMGFII--IGISSlTDTGLNGaLLQIISHGFIGAALFFLAGT------TYDrirlvyLD 362
Cdd:PRK12644 281 GGWRALRQHDLKLILAYGTVSQLGFLTvlVGIGT-RDAALAG-LAMLLAHALFKAALFLVVGIidhstgTRD------IR 352
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 122245642 363 EMGGIASPMPKMFtMFSSFSMASLA-LPGMSGFVAELIVFFGIITGQkYLLIPKILITFVMAIGMILTPIYSL 434
Cdd:PRK12644 353 KLSGLGRRQPVLA-VVAALAAASMAgLPPLLGFVAKEAALEAVLHDG-ALGPAGPVVLAGIVLGSILTVAYSL 423
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
130-350 |
2.16e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 66.15 E-value: 2.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 130 SSRDLLLFFIMWELELIPVYLLLCMWGGKKRL-YSATKFILYTAGGSVFLLMgVLGVALYGSNEPTLNFETSVNQSYPVV 208
Cdd:MTH00208 156 SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDAnSSALQAVIYNRIGDIGIIL-FLSLSLINFNSWNLNEILSLNNSNSFL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 209 LEIIFyIGFFIAFAVKSPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRINmELLPHaHSIFSPWLM 281
Cdd:MTH00208 235 INILL-FGILLAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGVFL------LIRTS-PLISN-SPWFLSLCL 304
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 122245642 282 IIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIssltdtGLNG---ALLQIISHGFIGAALFFLAG 350
Cdd:MTH00208 305 ILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAI------GLNQpnlALFHICTHAFFKAMLFLCSG 370
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-394 |
4.09e-11 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 65.18 E-value: 4.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPiFAGSLI--FFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDPLIQlVEDYKWINF--FDFHWRLGI 82
Cdd:PRK06590 5 LWLIVLLP-LIGALIlgLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFS-QTLWTWISVgdFDVDFGLRV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 83 DGLSIGPILLTGFITTLATLAAWPITRD----SR------LFHF--LMLAMysgqigsfsSRDLLLFFIMWELELIPVYL 150
Cdd:PRK06590 83 DGLSATMLVVVTGVSFLVHIYSIGYMAHdegyRRffaylnLFTFsmLMLVL---------SDNLLQLFFGWEGVGLCSYL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 151 LLCMWGGKKRLYSATK--FILyTAGGSVFLLMGVLGV-ALYGSneptLNFETsVNQSYPVVLE----IIFYIGF--FIAF 221
Cdd:PRK06590 154 LIGFWYKKPSAGAAAMkaFIV-NRVGDVGLALGIFLLfAEFGS----LNYDE-VFAAAPQFFGlgwsALTLICLllFIGA 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 222 AVKSPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRIN--MELLPHAhsifSPWLMIIGTIQIIYAA 292
Cdd:PRK06590 228 MGKSAQFPLHTWLPDamegpTPVSAliHAAT-MVTAGVYL------VARMSplFELSPEA----LLFVAIVGAVTALFAA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 293 STSLGQRNLKKRIAYSSVSHMG--FIIIGISsltdtGLNGALLQIISHGFIGAALFFLAGT-------TYDrIRlvyldE 363
Cdd:PRK06590 297 FIGLVQTDIKRVLAYSTMSQLGymFLALGVG-----AYAAAIFHLMTHAFFKALLFLGAGSvihamhhEQD-IR-----K 365
|
410 420 430
....*....|....*....|....*....|.
gi 122245642 364 MGGIASPMPKMFTMFSSFSMASLALPGMSGF 394
Cdd:PRK06590 366 MGGLRKKMPVTYATFLIGTLALIGIPPFAGF 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
1-496 |
7.10e-11 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 64.28 E-value: 7.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 1 MNYFPwltIIVVFPIFAgSLIFFLPHKGNRVIRWYTICICILELLLTTYA-FCYHFQSDdpliqlvedYKWINFFDFHWR 79
Cdd:PRK06277 1 MNLLP---LMVVFPMIC-AIIFNLLHGKDKLIKYLTFIVAILLPILPFLAsYGYYYFGG---------HGLVNGYHSGIT 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 80 LGIDGLSIGPILLTGFITTLATLAAWPITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKK 159
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEE 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 160 RLYSATKF-ILYTAGGSVFLLmgvlGVALYGSNEPTLNFETSVNQSYPVVLEIIFYIGF---FIAFAVKSPIIPLHTWLP 235
Cdd:PRK06277 148 AYKAALKYmILGNVAGSILLL----GIGFLLASTGTLNITDIHNALLVNPTSPVIYGGLlllIFGLLYGSGLPPFHTIKS 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 236 DTHGEAH-YSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMG 314
Cdd:PRK06277 224 DIYAKAKpFGSALLQTFSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGG 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 315 FIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGF 394
Cdd:PRK06277 304 YVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGF 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 395 VAELIVFFGIITGQkyllIPKIlitfvmAIGMILTPIYSLSMSRQMFYGYKLFNAPKDSFFDSG--PRELFLSISIFLPV 472
Cdd:PRK06277 384 QSKLMLAQAAMQAN----MPEL------AIIMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKkvPKYAVFSLAVLTIL 453
|
490 500
....*....|....*....|....*
gi 122245642 473 -IGIGIYPDFVLSLAVDKVEVILSN 496
Cdd:PRK06277 454 cIILGLFPDLVTNYLYPFANEIGRN 478
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
112-394 |
2.10e-09 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 60.04 E-value: 2.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 112 RLFHFLMLaMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKK-RLYSATKFILYTAGGSVFLLMGVLGV----A 186
Cdd:PRK07376 123 RFFAYLSL-FSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKgAADAAQKAFVVNRVGDFGLLLGILGLfwatG 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 187 LYGSNEPTLNFETSVNQ-SYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGA 258
Cdd:PRK07376 202 SFDFDGIADRLSELVSSgAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGVFLVARM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 259 YGLirinMELLPHAHSIFSpwlmIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSltdtGLNGA-LLQIIS 337
Cdd:PRK07376 281 YPV----FEQFPAVMTVIA----WTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGC----GAYSAgLFHLMT 348
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 122245642 338 HGFIGAALFFLAGTTYDRIRLVYLDE---------MGGIASPMPKMFTMFSSFSMASLALPGMSGF 394
Cdd:PRK07376 349 HAYFKAMLFLGSGSVIHGMEEVVGHDpvlaqdmrlMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
130-448 |
2.37e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 59.58 E-value: 2.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 130 SSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSAT-KFILYTAGGSVFLLMGvLGVALYGSNEPTLNFETSVNqsypvV 208
Cdd:MTH00211 128 SANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAAlQAVIYNRIGDIGLLLS-MVWLLLNLNSWEISQLFILN-----L 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 209 LEIIFYIGFFIAFAVKSPIIPLHTWLPDTHgEA--------HYSTcMLLAGILLkmgaygLIRINmELLPHAHSIFSpWL 280
Cdd:MTH00211 202 DLTLFLLGLLLAAMGKSAQFGFHPWLPSAM-EGptpvsallHSST-MVVAGVFL------LIRLS-PLFQNNQLILG-AV 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 281 MIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIssltdtGLNG---ALLQIISHGFIGAALFFLAG----TTY 353
Cdd:MTH00211 272 LLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL------GLNQpqlAFLHICTHAFFKAMLFMCSGsiihGLN 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 354 DR--IRlvyldEMGG--IASPMPKMFTMFSSFSMasLALPGMSGFVA-ELIVFFGIITGQKYLLipkiLITFVMAIGmiL 428
Cdd:MTH00211 346 NEqdIR-----KMGGlsKNLPFTSSCLFLGSLAL--MGFPFLSGFFSkDLILESMNGSYLNAWA----LLLTLLATS--L 412
|
330 340
....*....|....*....|
gi 122245642 429 TPIYSLSMSRQMFYGYKLFN 448
Cdd:MTH00211 413 TAAYSFRLIFLSLGGYPRFL 432
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
113-394 |
3.27e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 59.25 E-value: 3.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 113 LFHFLMLAMysgqigsFSSRDLLLFFIMWELELIPVYLLLCMWGGK-KRLYSATKFILYTAGGSVFLLMGVLGV-ALYGS 190
Cdd:MTH00210 119 LFTFLMIVL-------VTSDNYVQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDIGLVLAMIMIlKEFGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 191 NEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAvKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRiNMELLP 270
Cdd:MTH00210 192 LEFSTISSLLVTNINKESLTIICLLLFIGAVG-KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIR-SGPLFE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 271 HAhSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIII--GISSLTDtglngALLQIISHGFIGAALFFL 348
Cdd:MTH00210 270 GS-PLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMvcGISNYST-----SLFHLMNHAFFKALLFLS 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 122245642 349 AGTTYDRIRlvylDE-----MGGIASPMPKMFTMFSSFSMASLALPGMSGF 394
Cdd:MTH00210 344 AGSVIHAVS----DEqdmrkMGGLIKSIPFTYVMILIGSLSLMGFPYLTGF 390
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
5-451 |
5.89e-09 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 58.78 E-value: 5.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 5 PWLTIIVVFPIFAGSLIFFLpHKGNRVIR--WYTicicileLLLTTYAFCYhFQSDDPLIQ----LVEDYKWINFFDFHW 78
Cdd:PRK12645 2 SLLHIAILLPFIFALLIPFL-YKYFKRIHtgWFV-------LPVPVVLFIY-FLSLIPTTMsgntVMKTLPWIPSLGINF 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 79 RLGIDGLSIGPILLTGFITTLATLaaWPI----TRDSRLFHF---LMLAMySGQIGSFSSRDLLLFFIMWELELIPVYLL 151
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVL--YSIyylsKKKEQLGNFyvyLLLFM-GAMLGVVLSDNLIVLYLFWELTSISSFLL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 152 LCMWGGKKR-LYSATKFILYTAGGSVFLLMGVLGVALYGSN----EPTLNFETSVNQSYPVVLEIIFYIGFFiafaVKSP 226
Cdd:PRK12645 150 ISYWYEREAsRYGAQKSMLITVFGGLSMLGGFILLYIMTGSfsirEMIANADEIQNSPLFIPAMILILLGAF----TKSA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 227 IIPLHTWLPD-----THGEAH-YSTCMLLAGIllkmgaYGLIRinmellphahsiFSP---------WL-MIIGTIQIIY 290
Cdd:PRK12645 226 QFPFYIWLPDameapTPVSAYlHSATMVKAGI------YLVAR------------FTPifagsqvwfWTvTLVGLITLFW 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 291 AASTSLGQRNLKKRIAYSSVSHMGFII----IGISSLTDTGLNG---------ALLQIISHGFIGAALFFLAGT------ 351
Cdd:PRK12645 288 GSLNAVKQTDLKGILAFSTVSQLGLIMsllgIGAASLHYQGDDSkiyaaaitaAIFHLINHATFKGSLFMIVGIvdhetg 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 352 TYDRIRLvyldemGGIASPMPKMFT--MFSSFSMAslALPGMSGFVAELIVFFGIITGQKY----LLIPKILITFVMAIG 425
Cdd:PRK12645 368 TRDIRKL------GGLMTIMPITFTiaLIGALSMA--GLPPFNGFLSKEMFFESMLNATEAnlfsLDTWGVLFPVIAWVA 439
|
490 500
....*....|....*....|....*..
gi 122245642 426 MILTPIYSLSMSRQMFYG-YKLFNAPK 451
Cdd:PRK12645 440 SVFTFVYSIIFIFKTFFGkYKPEQLPK 466
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
134-394 |
7.91e-09 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 57.87 E-value: 7.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 134 LLLFFIMWELELIPVYLLLCMWGGkkRLY---SATKFILYTAGGSVFLLmgvLGVALYGSNEPTLNF-ETSVNQSYPvvl 209
Cdd:MTH00004 137 MFQLFIGWEGVGIMSFLLIGWWSG--RAEantAALQAIIYNRIGDIGLI---LSMAWLAMTLNTWEIqQLFSPTQTP--- 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 210 eIIFYIGFFIAFAVKSPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRIN--MELLPHAHSIfspwL 280
Cdd:MTH00004 209 -TLPLLGLILAATGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRTHplLQNNQTALTI----C 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 281 MIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIssltdtGLNG---ALLQIISHGFIGAALFFLAGTTY---- 353
Cdd:MTH00004 277 LCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI------GLNQpqlAFLHISTHAFFKAMLFLCSGSIIhnln 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 122245642 354 ---DrIRlvyldEMGGIASPMPkmftMFSSF-SMASLALPGM---SGF 394
Cdd:MTH00004 351 neqD-IR-----KMGGLQKTLP----ITSSClTIGNLALMGTpflSGF 388
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
131-424 |
1.15e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 57.37 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 131 SRDLLLFFIMWELELIPVYLllcMWGGKKR----LYSATKFILYTAGGSVFLLMGVlgVALYG-----SNEPTLNFETSV 201
Cdd:PRK02504 129 ATELVMIFISLETLSIASYL---LTGYMKRdprsNEAALKYLLIGAASSAIFLYGS--SLLYGlsggsTQLSAIALALIT 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 202 NQSYPVVLEIIFYIGFfIAFavKSPIIPLHTWLPD------THGEAHYSTCMLLAG----ILLKMGAYGLIRINMELLPH 271
Cdd:PRK02504 204 SPSLGLALALVFVIAG-IAF--KISAVPFHQWTPDvyegspTPVVAFLSVGSKAAGfalaIRLLVTAFPSFDEQWKLLFT 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 272 AHSIFSpwlMIIGTIqiiyaasTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISH------GFIGAAL 345
Cdd:PRK02504 281 ALAILS---MVLGNV-------VALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYlfmnlgAFACVIL 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 346 FFLAgTTYDRIrlvylDEMGGIASPMPkMFTMFSSFSMASLA-LPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAI 424
Cdd:PRK02504 351 FSLR-TGTDQI-----SDYAGLYQKDP-LLTLGLSLCLLSLGgIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISI 423
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
116-477 |
2.36e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 55.75 E-value: 2.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 116 FLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATK-FILYTAGGSVFLLMGVLgvalygsnept 194
Cdd:MTH00200 8 LFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKyFIIQATASALLLFGGLL----------- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 195 lNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAhs 274
Cdd:MTH00200 77 -NAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNI-- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 275 ifspwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYD 354
Cdd:MTH00200 154 -----LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKIN 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 355 RIRlvyldeMGGIASPMPKMFTMFSSFSMAslALPGMSGFVAELivfFGIITGQKYLLipkilitFVMAIGMILTPIYSL 434
Cdd:MTH00200 229 SLS------SSKTKNPILSMLLGLTLLSLG--GLPPLTGFFPKW---LILQELSKQGL-------FIYATILLLGSLLSL 290
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 122245642 435 SMSRQMFYGYKLFNAPKDSFFDSGPRELFLSISIFLPVIGIGI 477
Cdd:MTH00200 291 FFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSI 333
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
116-348 |
9.81e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 54.16 E-value: 9.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 116 FLMLAMYSGqIGSFSSRDLLLFFIMWELELIP-VYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGVALygsNEPT 194
Cdd:MTH00062 76 FLFLSLIFS-ILCFCVNNSLLFWFFYELSIIPlLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSL---VNGS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 195 LNFetSVNQSYPVVLEIIFYIGFFIaFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHS 274
Cdd:MTH00062 152 FNF--SDWGSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFL 228
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 122245642 275 IFSPWLMIIGTIQIIYAASTSLGQRNLkkriAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFL 348
Cdd:MTH00062 229 GYLFLCCLFSVFFLITACSELDGKRWL----AFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLL 298
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
116-437 |
8.13e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 50.83 E-value: 8.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 116 FLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGVAlygsneptl 195
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF--------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 196 nfetsvnqsYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLirinmeLLPHAHSI 275
Cdd:MTH00197 73 ---------SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLI------LAFNSSSF 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 276 FSpwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSltdtGLNGALLQIISHGFIGAALFFLAGTTydr 355
Cdd:MTH00197 137 MG--LLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVY----SPSIFMLYYLIYFVIMFMLFLFLSKN--- 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 356 irLVYLDEMGGIASPMPKMFTMFSSFSMASLA-LPGMSGFVAELIVFFGIITGQKYllipkiLITFVMAIGMILTPIYSL 434
Cdd:MTH00197 208 --NLSSLNQQYSNPESMSSNLVFLGLSFLSLGgLPPLSGFFLKWLILTSLLSSNIS------LITFMLILSTCFSLYYYL 279
|
...
gi 122245642 435 SMS 437
Cdd:MTH00197 280 SLA 282
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
174-434 |
9.13e-07 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 51.45 E-value: 9.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 174 GSVFLLMGVLGVALYGsnePTLNFETSVN--QSYPVVLEIIFYIGF-FIAFAV-KSPIIPLHTWLpDTHGEAHYSTCMLL 249
Cdd:PRK07390 183 GDLLLLMGVVALSPLA---GTLNFSDLAAwaATANLDPLTATLLGLaLIAGPTgKCAQFPLHLWL-DEAMEGPNPASILR 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 250 AGILLKMGAYGLIRInMELLphahsIFSPW----LMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIsSLTD 325
Cdd:PRK07390 259 NSVVVATGAWVLIKL-QPVL-----ALSPValtvLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAV-GLQQ 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 326 TGLngALLQIISHGFIGAALFFLAGT------TYDrirlvyLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELI 399
Cdd:PRK07390 332 PDI--ALLLLLTHAIAKALLFMSVGSiilttiTQD------LTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLR 403
|
250 260 270
....*....|....*....|....*....|....*
gi 122245642 400 VFFGIITGQKYLLIPKILITFVMAIGmiLTPIYSL 434
Cdd:PRK07390 404 LADGLWAVSPWLVGVLLLVNALTAFN--LTRVFRL 436
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
90-497 |
1.47e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.94 E-value: 1.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 90 ILLTGFITTLATLAAWPITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWggKKRLYSATKFIL 169
Cdd:PRK06459 50 SIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--KKNKRPAFVFMA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 170 YTAGGSVFLLMGVlgvALYGSNEPTLNFETSVNQsypvVLEIIFYIGFFIafavKSPIIPLH--TWLPDTHGEAHYSTCM 247
Cdd:PRK06459 128 FGELSTVLILAGF---AWAFIISGTTNFSYLPSP----VPLILASFGFII----KMGMMPFLvsEWLPIAHGNAPSNFSA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 248 LLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTG 327
Cdd:PRK06459 197 ILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVTK 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 328 LNGALLQI----------ISHGFIGAALFFLAGTTYDRirlvYLDEMGGIASPMPKMFTMFSSFSMAslALPGMSGFVAE 397
Cdd:PRK06459 277 QLITSIEHfslitvilysFAHSVAKTGLFLSSGLQEKQ----SITYSKKIRNRWIELGLTLLASSLS--GLLPNIGGVAS 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 398 LIV----FFGIITGQKYLLIPKILITFVMAIGmilTPIYSLSMSRQMFYGyKLFNAPKDSFFDSGPRELFLS-----ISI 468
Cdd:PRK06459 351 WLLleslFMFAYVLHNVISILFIVTGAIIAMG---EGLATALLIKYITYT-SLFRNTKEQLSKIKKYPILLSalivlILG 426
|
410 420
....*....|....*....|....*....
gi 122245642 469 FLPVIGIGIYPDFVLSLAVDKVEVILSNF 497
Cdd:PRK06459 427 FTLPYLISPFKTSTTILGMLTNSLILSQY 455
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
116-448 |
1.54e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 49.88 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 116 FLMLaMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGvalygsneptl 195
Cdd:MTH00144 9 FLFL-MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLI----------- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 196 nfetsvnqSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGI--LLKMGAYGLIRINMELLPHah 273
Cdd:MTH00144 77 --------MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWqkVAPLFLLSNFLDLYWLAYL-- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 274 sifspwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIgaaLFFLAGTTY 353
Cdd:MTH00144 147 ------LCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDS 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 354 DRirlvyldeMGGIASPMPKMFTMFSSFSMA-SLA-LPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAIGMILTPI 431
Cdd:MTH00144 218 GS--------MKDLGSLKPSYKTGLSIISLLlSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVF 289
|
330
....*....|....*..
gi 122245642 432 YSLSMSRQMFYGYKLFN 448
Cdd:MTH00144 290 FSSFLSSSKSKKSNSSK 306
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
7-443 |
2.55e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 50.19 E-value: 2.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 7 LTIIVVFPiFAGSLI-FFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDdpliQLVEDYKWINFFDFHWRLGIDGL 85
Cdd:PRK12648 3 LLLLVLLP-FLGALLaALLPRNARNAEAWLAGLVALAALVLLALLYPAVAAGE----VIRAEIEWLPALGLNLSLRLDGL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 86 SIgpiLLTGFITTLATL----AAWPITRD---SRLFHFLMLAMYSgQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGK 158
Cdd:PRK12648 78 AW---LFALLILGIGLLvvlyARYYLSPAdpvPRFFSFLLLFMGA-MLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 159 K--RLYSATKFILyTAGGSVFLLMGVLGVA-LYGSneptlnFETSV----------NQSYPVVLeIIFYIGFFiafaVKS 225
Cdd:PRK12648 154 AdaRRGARMALTV-TGAGGLALLAGVLLLGhIVGS------YDLDVvlaagdliraHPLYPPAL-VLILLGAF----TKS 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 226 PIIPLHTWLPdtHGEA---------HYSTcMLLAGILLkmgaygLIRinmeLLPhAHSIFSPWLMIIGT---IQIIYAAS 293
Cdd:PRK12648 222 AQFPFHFWLP--HAMAaptpvsaylHSAT-MVKAGVFL------LAR----LWP-VLAGTEEWFWIVGGaglITLLLGAY 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 294 TSLGQRNLKKRIAYSSVSHMGFI--IIGISslTDTGLNGALLQIISHGFIGAALFFLAGT------TYDRIRLvyldemG 365
Cdd:PRK12648 288 FALFQHDLKGLLAYSTISHLGLItlLLGLG--SPLAAVAAIFHIINHATFKASLFMAAGIidhetgTRDMRRL------S 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 366 GIASPMPKMFT--MFSSFSMAslALPGMSGFVA-ELivFFGIITGQKYLLIPKILITFVMAIGMILTPIYSLSMSRQMFY 442
Cdd:PRK12648 360 GLRRLMPITATlaMVAAAAMA--GVPLLNGFLSkEM--FFAETLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFF 435
|
.
gi 122245642 443 G 443
Cdd:PRK12648 436 G 436
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
219-442 |
2.63e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 49.76 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 219 IAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELlpHAHSIFSPWLMIIGTIQIIYAASTSLGQ 298
Cdd:MTH00207 187 IAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL--SSTYWFNPALLLTASLTMLMAGLSAMTE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 299 RNLKKRIAYSSVSHMGFIiigISSLTDTGLNGALLQIISHGFIGAALFFLAGTTydrIRLVY----LDEMGGIASPMPkm 374
Cdd:MTH00207 265 CDMKKIIALSTLSQLGVM---MASLGLGMPKLALFHLITHALFKALLFVCAGSL---IHSHHhsqdLRTMGNLTNQMP-- 336
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 122245642 375 FTMfSSFSMASLAL---PGMSGFVA-ELIVFFGIITGQKYLLIPKILI----TFVMAIGMILTPIYSLSMSRQMFY 442
Cdd:MTH00207 337 LTT-SCLLIANLALcgsPFLSGFYSkDLILESSLFYPHNSLMILMIFLatalTAAYSTRFTLAVLWSPNSSSPYHH 411
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
130-394 |
4.82e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 49.14 E-value: 4.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 130 SSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSAT-KFILYTAGGSVFLLMGVLGVALYgSNEPTLNFETSVNQSypvv 208
Cdd:MTH00066 131 TANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAAlQAVLYNRVGDIGLILSMAWLAMN-TNSWELQQIFLLNDN---- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 209 lEIIFYIGFFIAFAVKSPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRINmELLPHAHSIFSPWLM 281
Cdd:MTH00066 206 -STLPLLGLILAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRFH-PLLENNQTALTICLC 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 282 IiGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIssltdtGLNG---ALLQIISHGFIGAALFFLAGTTYDRIRl 358
Cdd:MTH00066 277 L-GALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTI------GLNQpqlAFFHICTHAFFKAMLFLCSGSIIHSLN- 348
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 122245642 359 vylDE-----MGGIASPMPKMFTMFSSFSMASLALPGMSGF 394
Cdd:MTH00066 349 ---DEqdirkMGGLQKALPITTSCLTIGSLALTGTPFLAGF 386
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-400 |
9.04e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.19 E-value: 9.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 95 FITTLATLAAWPITRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFilytagG 174
Cdd:PRK12664 46 FSLALIFLYILPIKNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHY------A 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 175 SVFLLMGVLgvALYGSneptlnFETSVNQSYPVVLEIIFYIGFFIAFAVkspiIPLHTWLPDTHGEAHYSTCMLLAGILL 254
Cdd:PRK12664 120 CVHFFSGVL--LLVGA------SGQAQNGQYTGYCKLLFMLGLLINCAC----FPASSWVVDAYPAASNFGIIVLSLFTT 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 255 KMGAYGLIRInmellphahsiFS--PWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGAL 332
Cdd:PRK12664 188 KVAALVLLLF-----------FSgeEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAIGI 256
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 122245642 333 --LQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGI-ASPMPKMFTMFSSFSMAslALPGMSGFVAELIV 400
Cdd:PRK12664 257 liLQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLfKMSLEAMCCIIAILNMG--AFPGTAGFVSKSLI 325
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
215-394 |
9.87e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 48.31 E-value: 9.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 215 IGFFIAFAVKSPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRIN--MELLPHAHSIfspwLMIIGT 285
Cdd:MTH00108 214 MGLLLAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGVFL------LIRFHplMENNKTIQTL----TLCLGA 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 286 IQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIssltdtGLNG---ALLQIISHGFIGAALFFLAGTTYDR------I 356
Cdd:MTH00108 283 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI------GINQphlAFLHICTHAFFKAMLFMCSGSIIHNlndeqdI 356
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 122245642 357 RlvyldEMGGIASPMPkmFTMfSSFSMASLALPGM---SGF 394
Cdd:MTH00108 357 R-----KMGGLFKTLP--FTS-TALIIGSLALTGMpflTGF 389
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
214-328 |
1.26e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 47.93 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 214 YIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLIRinmellphAHSIFSPWLMIIGTIQIIYAAS 293
Cdd:MTH00198 302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVYILLT--------SLVITSKLLLSVAIISLVVGAF 372
|
90 100 110
....*....|....*....|....*....|....*
gi 122245642 294 TSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGL 328
Cdd:MTH00198 373 GALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESL 407
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
167-423 |
1.30e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 47.70 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 167 FILYTAGGSVFLLMGVLgvaLYGsneptLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTC 246
Cdd:MTH00199 154 FVLGAVSSGLFLFGCAL---LYG-----LTGETSIQGINSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITT 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 247 MLLAgILLKMGAYGLIrinMELLPHAHSIfspwlMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDT 326
Cdd:MTH00199 226 ALLA-TVPKIGVFSIL---VQIGPVTNVV-----LICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFE 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 327 GLNGALLQIISHGFIGAALFFLAGTTydRIRLVYLDEMGGIASPMPKMFTMFSSFSMASLALPGMSGFVAELIVFFGIIT 406
Cdd:MTH00199 297 SIQASLIYMIIYVIMSICSFSIILSL--KLTKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVS 374
|
250
....*....|....*..
gi 122245642 407 GQKYLLIPKILITFVMA 423
Cdd:MTH00199 375 SGYYLICIIAVLSSVIA 391
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
130-336 |
2.39e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.56 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 130 SSRDLLLFFIMWELELIPVYLLLCMWGGKkrLYSATK----FILYTAGGSVFLLMGVLGVALYGSNE-PTLNFETSVNQS 204
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGS--GYSAEAglkyFVLGALSSGLFLFGCALLCGTTGGLHlSYINLVLNSGQS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 205 YPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLIrinMELLPHAHsifspWLMIIG 284
Cdd:MTH00196 89 FSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSIL---VSIGLNVN-----ILLIGG 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 122245642 285 TIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSLTDTGLNGALLQII 336
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLF 211
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
224-350 |
1.88e-04 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 44.11 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 224 KSPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIrinmELLPHAHSIFSpwlmIIGTIQIIYAASTSL 296
Cdd:CHL00025 240 KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVARLLPLF----IVIPYIMNLIS----LIGIITALLGATLAL 310
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 122245642 297 GQRNLKKRIAYSSVSHMGFIII--GISSLTdtglnGALLQIISHGFIGAALFFLAG 350
Cdd:CHL00025 311 AQKDIKRGLAYSTMSQLGYMMLalGIGSYR-----AALFHLITHAYSKALLFLGSG 361
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-316 |
1.97e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 43.62 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 111 SRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVlGVALYGS 190
Cdd:PRK06591 114 KSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAI-GFLLSIT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 191 NEPTLNFETSVNQSYPVVLEIIFYIGFFIAFAV-KSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR-----I 264
Cdd:PRK06591 193 GSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAIlKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKftyiiI 272
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 122245642 265 NMELLPHAHSIFspwLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFI 316
Cdd:PRK06591 273 GYETIKTAITNF---IRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
116-485 |
9.09e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 41.45 E-value: 9.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 116 FLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGVA-LYGS---N 191
Cdd:MTH00041 8 FLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAwLSGSwsiN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 192 EPTLNFEtsvnqSYPVVLEIIFYIGFFiafavkspiiPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINmellph 271
Cdd:MTH00041 88 GPLNTLS-----SIIITLALALKLGLA----------PCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIS------ 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 272 aHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIgissLTDTGLNGALLQIISHGFIGAALFFLAGT 351
Cdd:MTH00041 147 -NLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIII----TSAYSPNASIIMFLIYIIINTSIFLIGNN 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 352 TYdrirLVYLDEMGGIASPMPKMFTMFsSFSMASLA-LPGMSGFVAELIVFFGIITGQKYLLIPKILITFVMAIGMILTP 430
Cdd:MTH00041 222 FS----LSTLSHLNKLSQLNPISAFLF-ILSILSLGgLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRI 296
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 122245642 431 IYSLSMSrqMFYGYKLFNAPKDSFFDSGPRELFLSISIFLPVIGIGIYPDFVLSL 485
Cdd:MTH00041 297 SFNTSLT--LFPQHSISLFSWRNSGNITVYGVILSILSSISILGLLLIPLFLSFL 349
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
149-443 |
9.59e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 41.55 E-value: 9.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 149 YLLLCMWGGKKRLYSATKFILYTAGGSVFLLMGVLGVALYGS-NEPTLNFEtsvnqsypvvLEIIFYIGFFIAFA--VKS 225
Cdd:MTH00209 120 YLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNwNIFYLNFN----------SNLGSVISVLIVLAamTKS 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 226 PIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELlpHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRI 305
Cdd:MTH00209 190 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL--FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKII 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 306 AYSSVSHMGFIIIGISSltdTGLNGALLQIISHGFIGAALFFLAGTT-YDRIRLVYLDEMGGIASPMPKMFTMFSSFSMA 384
Cdd:MTH00209 268 ALSTLSQLGLMMCSLGL---NQPELAFFHLITHALFKALLFICAGNIiHSHGHSQDIRMVGNLWYQMPITSICLNIANLS 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 122245642 385 SLALPGMSGFVA-ELIV---FFGIITgqkyllipkILITFVMAIGMILTPIYSLSMSRQMFYG 443
Cdd:MTH00209 345 LCGIPFLAGFYSkDLILesmLESNMP---------IMTLILMFLSTSLTAAYSMRLSYFSLWG 398
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
219-358 |
2.36e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 219 IAFAV--KSPIIPLHTWLPDTHgEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSifSPW-LMIIGTIQIIYAASTS 295
Cdd:PRK08168 206 LVLAVilKTAQLPVHGWLIQVM-EAPTPVSALLHAGVVNLGGFVLIRF-APLLEQAPP--ARWlLVLVGLATAVLAGLVM 281
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 122245642 296 LGQRNLKKRIAYSSVSHMGFIII----GISSLtdtglngALLQIISHGFIGAALFFLAGTTYDRIRL 358
Cdd:PRK08168 282 LTRISIKVRLAWSTVAQMGFMLLecglGLYEL-------ALLHLVAHSLYKAHAFLSASEAVRDTRL 341
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
210-499 |
3.14e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 40.21 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 210 EIIFYIGFFIAFA--VKSPIIPLHTWLPdthgEA-----------HYSTcMLLAGILLkmgaygLIRI--NMELLPhahs 274
Cdd:MTH00151 173 KLSGWLGLLLVLAamTKSAQIPFSSWLP----AAmaaptpvsalvHSST-LVTAGVFL------LIRFfpFLSSSS---- 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 275 IFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII----IGISSLtdtglngALLQIISHGFIGAALFFLAG 350
Cdd:MTH00151 238 GFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMfslgLGMPSL-------ALFHLYTHALFKALLFLCAG 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 351 ------TTYDRIRLvyldeMGGIASPMPKMFTMFSSFSMASLALPGMSGFVA-ELIVFFGIITGQKYLLIpkilitFVMA 423
Cdd:MTH00151 311 siihssSGTQDIRL-----LGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSkDLILESSLMSPTSLLMV------LLMF 379
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 122245642 424 IGMILTPIYSLsmsRQMFYGykLFNAPKDSFFDSGPRE-LFLSISIFLPVIGIGIYPDFVLSLAVD-KVEVILSNFFY 499
Cdd:MTH00151 380 VGVGLTALYSA---RLSFCL--VWGSMKSSSLSSKSDEdFYVSLPMLLLSLGALIGGKLLQSLFEGfSEEFFLPSYLK 452
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
219-318 |
3.55e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.52 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 219 IAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLirinmeLLPHAHSIFSPWLMIIGTIQIIYAASTSLGQ 298
Cdd:MTH00070 100 IALMMKLGIAPFHFWLPEVLQGLDLTTGLILS-TWQKLAPMAL------LIQISHLLNSNLLIIMGLLSTLIGGWGGLNQ 172
|
90 100
....*....|....*....|
gi 122245642 299 RNLKKRIAYSSVSHMGFIII 318
Cdd:MTH00070 173 TQLRKIMAYSSIAHLGWMII 192
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
174-470 |
8.51e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 38.58 E-value: 8.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 174 GSVFLLMGVLGVALYGSneptLNFETSVNQSYPVVLEIIFYIGFFIAFAVKSPIIPLHTWLPdthgEA-----------H 242
Cdd:MTH00165 147 GDVAILLSIAWMMNFGS----WNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLP----AAmaaptpvsalvH 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 243 YSTcmllagiLLKMGAYGLIRINMELLphaHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIgISS 322
Cdd:MTH00165 219 SST-------LVTAGVYLLIRFNNLLF---SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS-ILS 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122245642 323 LTDTGLngALLQIISHGFIGAALFFLAGT------TYDRIRLvyldeMGGIASPMPKMFTMFSSFSMASLALPGMSGFVA 396
Cdd:MTH00165 288 LGFPKL--AFFHLLTHALFKALLFLCAGSiihnmsNSQDIRF-----MGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYS 360
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 122245642 397 -ELI---VFFGIITgqkyllipkILITFVMAIGMILTPIYSLSMsrqMFYGYKLFNAPKdSFFDSGPRELFLSISIFL 470
Cdd:MTH00165 361 kDLIlemVSMSNLN---------FFIFFLFFFSTGLTVSYSFRL---IYYSMSGDFNLK-SLNNLSDESKFMLKSMIL 425
|
|
| |
