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Conserved domains on  [gi|1221751704|ref|WP_089878061|]
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DUF5795 family protein [Halogeometricum limi]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5795 pfam19108
Family of unknown function (DUF5795); Family of unknown function predominantly found in ...
 3-73 1.25e-47

Family of unknown function (DUF5795); Family of unknown function predominantly found in Halobacteria.


:

Pssm-ID: 436974  Cd Length: 74  Bit Score: 145.24  E-value: 1.25e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1221751704  3 NRVVQGRMVTPERLAELVEGERPLEAEAIEDADRDCPDCGGNVISVGYMPSVTEFVTAYKCQDCDWSETDR 73
Cdd:pfam19108  4 NRVVQGRMVTPKRLAELIEGESVMEAEAIEDADRDCPDCGGDVLEVGYMPSVTEFVTGYKCQDCDWSETDR 74
 
Name Accession Description Interval E-value
DUF5795 pfam19108
Family of unknown function (DUF5795); Family of unknown function predominantly found in ...
 3-73 1.25e-47

Family of unknown function (DUF5795); Family of unknown function predominantly found in Halobacteria.


Pssm-ID: 436974  Cd Length: 74  Bit Score: 145.24  E-value: 1.25e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1221751704  3 NRVVQGRMVTPERLAELVEGERPLEAEAIEDADRDCPDCGGNVISVGYMPSVTEFVTAYKCQDCDWSETDR 73
Cdd:pfam19108  4 NRVVQGRMVTPKRLAELIEGESVMEAEAIEDADRDCPDCGGDVLEVGYMPSVTEFVTGYKCQDCDWSETDR 74
 
Name Accession Description Interval E-value
DUF5795 pfam19108
Family of unknown function (DUF5795); Family of unknown function predominantly found in ...
 3-73 1.25e-47

Family of unknown function (DUF5795); Family of unknown function predominantly found in Halobacteria.


Pssm-ID: 436974  Cd Length: 74  Bit Score: 145.24  E-value: 1.25e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1221751704  3 NRVVQGRMVTPERLAELVEGERPLEAEAIEDADRDCPDCGGNVISVGYMPSVTEFVTAYKCQDCDWSETDR 73
Cdd:pfam19108  4 NRVVQGRMVTPKRLAELIEGESVMEAEAIEDADRDCPDCGGDVLEVGYMPSVTEFVTGYKCQDCDWSETDR 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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