|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 564.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 1 MNPYVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTlDPLLLSVLGLT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 241 TATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTSTAPWRTQTT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 1214146029 321 QNSLPLALSTVMALGLLPITPSMLMLV 347
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.30e-151 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 429.34 E-value: 2.30e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 1 MNPYVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLLSVLGLT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 241 TATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTSTAPWRtQTT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWR-FKN 319
|
330 340
....*....|....*....|....*.
gi 1214146029 321 QNSLPLALSTVMALGLLPITPSMLML 346
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
2.62e-130 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 376.09 E-value: 2.62e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 1 MNPYVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLLSVLGLT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 241 TATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTSTAPWRTQTT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*..
gi 1214146029 321 QNSLpLALSTVMALGLLPITPSMLMLV 347
Cdd:MTH00112 321 KNTL-TATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.27e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 360.70 E-value: 3.27e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 1 MNPYVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLLSVLGLT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 241 TATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTSTAPWRTQTT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*.
gi 1214146029 321 QNSLPLALSTVMALGLLPITPSMLML 346
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.47e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 333.47 E-value: 1.47e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 1 MNPYVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLLSVLGLT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 241 TATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTSTAPWRTQTT 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1214146029 321 QNsLPLALSTVMALGLLPITPSMLML 346
Cdd:MTH00200 321 SN-LLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-344 |
1.09e-92 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 280.28 E-value: 1.09e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 1 MNPYVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLLSVLGLT 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 241 TATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTSTAPWRTQTT 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|....*....
gi 1214146029 321 QNSLPLALS-----TVMALGLLPITPSML 344
Cdd:MTH00041 321 ITVYGVILSilssiSILGLLLIPLFLSFL 349
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-348 |
8.44e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 192.73 E-value: 8.44e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 1 MNPYVLTtLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT 80
Cdd:MTH00160 3 MNSSKLL-FLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSdpaattMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLdplLLSVLGLT 160
Cdd:MTH00160 82 LMLFNNISSM------LINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN---FIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 241 TATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTStstapWRTQTT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNK-----WNLKKK 307
|
330 340
....*....|....*....|....*...
gi 1214146029 321 QNSLPLALSTVMALGLLPITPSMLMLVI 348
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-344 |
2.81e-46 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 160.05 E-value: 2.81e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 10 LFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGWDMTnm 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 90 sdpaatTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPL-LLSVLGLTSTFVGGWG 168
Cdd:MTH00144 88 ------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAyLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 169 GLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTtaFLTLKFSSATKINTLATIWSKSPVLTATTALVL 248
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSG--FLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 249 LSLGG-LPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTStapwrtqtTQNSLPLA 327
Cdd:MTH00144 240 LLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSN--------SSKVLNSS 311
|
330
....*....|....*..
gi 1214146029 328 LSTVMALGLLPITPSML 344
Cdd:MTH00144 312 IISLNLLGGLLFLLLYL 328
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-338 |
2.06e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 158.02 E-value: 2.06e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 12 SLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAgttnawTTGGWDMTNMSD 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLG------MTMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 92 PAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLLSVLGLTSTFVGGWGGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 172 QTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVLTATTALVLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 252 GGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTSTAPWrtqTTQNSLPLALSTV 331
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPY---EPKTKILISMCTL 324
|
....*..
gi 1214146029 332 MaLGLLP 338
Cdd:MTH00011 325 S-LGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-299 |
1.44e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 155.60 E-value: 1.44e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 9 LLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGWDMTN 88
Cdd:MTH00197 3 FLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLSV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 89 MsdpaattMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPmaLIIQTAQTLDPLLLSVLGLTSTFVGGWG 168
Cdd:MTH00197 83 V-------LVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 169 GLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSSATKINTLATIWSKSPVLTATTALVL 248
Cdd:MTH00197 154 GMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSF 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1214146029 249 LSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYT 299
Cdd:MTH00197 234 LSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYK 284
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-300 |
1.38e-33 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 129.08 E-value: 1.38e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 4 YVLttLLFSLgLGTTLTFASSNWLLAWMGLEINTLAIVPLMA-QHHHPRAVEATTKYFLTQATAAAVILF--------AG 74
Cdd:COG1007 105 YAL--LLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 75 TTN----AWTTGGWDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLD 150
Cdd:COG1007 182 SLNlagiAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAF 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 151 P-------LLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVL----QYAPQLTLLALMTYVLMTTTAFLTL 219
Cdd:COG1007 262 PglaadwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtPLGVSAALFYLLAYLFMNLGAFAVI 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 220 -----KFSSATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYL 294
Cdd:COG1007 342 lllsrKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYL 421
|
....*.
gi 1214146029 295 RLCYTM 300
Cdd:COG1007 422 RVVKAM 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
7.06e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 111.66 E-value: 7.06e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 15 LGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHP-RAVEATTKYFLTQATAAAVILFAGTTNAWTTGG---------- 83
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGlhlsyinlvl 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 84 ---WDMTNMSDPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLlsVLGLT 160
Cdd:MTH00196 84 nsgQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILL--IGGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAP----QLTLLALMTYVLMTTTAFLTLKFSSATK--INTLATIW 234
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSGLS 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1214146029 235 SKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRL 296
Cdd:MTH00196 242 RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-338 |
1.69e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 112.22 E-value: 1.69e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 4 YVLttLLFSLgLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQH-HHPRAVEATTKYFLTQATAAAVILF--------AG 74
Cdd:PRK05777 106 YLL--VLFAL-LGMMVMVSANDLLTLFLGLELLSLPLYALAALRrDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 75 TTNAWTTGGWDMTNMSDP----AATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLD 150
Cdd:PRK05777 183 SLSFAGIAKALADGSGNSllllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 151 P-------LLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALM----TYVLMTTTAF--- 216
Cdd:PRK05777 263 GglsedwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLfyllAYLFMTLGAFgvi 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 217 --LTLKFSSATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYL 294
Cdd:PRK05777 343 slLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYL 422
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1214146029 295 RLCYTMTLtiSPNTSTSTAPWRTQTTQNSLPLALSTVMALGLLP 338
Cdd:PRK05777 423 RVIKLMYF--DEPPRDAPVNWPLSAGGAVLSVSALLVLVLGIFP 464
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
9.90e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 104.33 E-value: 9.90e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 13 LGLGTTLTFASSNWLLAWMGLEINTLAIVPLMA-QHHHPRAVEATTKYFLTQATAAAVILF--------AGTT-----NA 78
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFgcallyglTGETsiqgiNS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 79 WTTGGWdmtnmsdpaATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDPLLLSVLg 158
Cdd:MTH00199 186 ILTGDV---------GKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAV- 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 159 lTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAP----QLTLLALMTYVLMTTTAF---LTLKFSSATkINTLA 231
Cdd:MTH00199 256 -LSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVS 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1214146029 232 TIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRL 296
Cdd:MTH00199 334 GLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
8-300 |
2.23e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 94.44 E-value: 2.23e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 8 TLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGWDMT 87
Cdd:COG0651 111 PLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 88 NMSDPAAT----------TMILAALALKIGLAPMHFWMPE-----------VLQGLDLLTGL--ILSTWQKLAPMALIIQ 144
Cdd:COG0651 191 DLAARLAEldpglllaafALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALF 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 145 TAqtldpLLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYV----LMTTTAFLT-- 218
Cdd:COG0651 271 LG-----TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAag 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 219 --LKFSSATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRL 296
Cdd:COG0651 346 aiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
....
gi 1214146029 297 CYTM 300
Cdd:COG0651 426 FGRA 429
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.72e-21 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 91.22 E-value: 5.72e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 23 SSNWLLAWMGLEINTLAIVPLMA-QHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGWDMTNMSDPAATT----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 97 ------MILAALALKIGLAPMHFWMPEVLQGLDLLTGLIL-STWQKLAPMALI-----IQTAQTLDPLLLSVLGLTSTFV 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIrrsllYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 165 GGWGGLNQTQLRKILAYSSIAHMGWMIIVL----QYAPQLTLLALMTYVLMTTTAFL-----TLKFSSATKINTLATIWS 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1214146029 236 KSPVLTATTALVLLSLGGLPPLTGFMPKWLILQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
9-345 |
5.56e-20 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 90.39 E-value: 5.56e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 9 LLFSLgLGTTLTFASSNWLLAWMGLEINTLAIVPLMA-QHHHPRAVEATTKYFLTQATAAAVILF--------AGTTN-- 77
Cdd:TIGR01770 108 LLFAL-LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgisliygfTGSLNfe 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 78 ----AWTTGGWDMTNMSdpAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQ-------TA 146
Cdd:TIGR01770 187 dlllFLSNGMLNISLLL--LGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRlflyilfGF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 147 QTLDPLLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVL----QYAPQLTLLALMTYVLMTTTAFLTLKFS 222
Cdd:TIGR01770 265 SEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLlagtLEGIKAVLFYIFIYALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 223 SATK------INTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRL 296
Cdd:TIGR01770 345 RSYKdewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1214146029 297 CYTMTLtispNTSTSTAPWRTQTTQNSLPLALSTvMALGLLPITPSMLM 345
Cdd:TIGR01770 425 VKVMYF----DKPERRIPSNPQSKAQSLLLSISA-LFILFLGLFPSLIL 468
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-300 |
2.32e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.21 E-value: 2.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 9 LLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAV---------EATTKYFLTQATAAAVILFAGTTNAW 79
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 80 TTGGWDM--TNMSDPAATT------------MILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQT 145
Cdd:MTH00198 273 FTGNEGMlgTILSATLETTnielrqgslgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSL 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 146 AQTlDPLLLSVlGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMtttaFLTLKFSSAT 225
Cdd:MTH00198 353 VIT-SKLLLSV-AIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVT----YLVSALASFT 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 226 KINTLA----------------------------TIWSKS-PVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLP 276
Cdd:MTH00198 427 VICTLEefgtrtptsrqrdgsfgnynlvrrlvdlTILSRGqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFS 506
|
330 340 350
....*....|....*....|....*....|.
gi 1214146029 277 LTATVMALAAL-------ISLYFYLRLCYTM 300
Cdd:MTH00198 507 SSLSIYYLVALfaiictcISAFYYIRIVATI 537
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-300 |
2.65e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 67.38 E-value: 2.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 50 PRAVEATTKYFLTQATAAAVILF---------AGTTNAWTTGGWDMTNMSDPAATTMI--LAALALKIGLAPMHFWMPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsGGSTQLSAIALALITSPSLGLALALVfvIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 119 LQGLDLLTGLILSTWQKLAPMALIIQTAQTLDP-------LLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMI 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPsfdeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 192 IVLQYAPQ----LTLLALMTYVLMTTTAFL-TLKFSSAT---KINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPK 263
Cdd:PRK02504 317 IGLVAGTEagyaSMVFYLLAYLFMNLGAFAcVILFSLRTgtdQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
250 260 270
....*....|....*....|....*....|....*..
gi 1214146029 264 WLILQELAKQGLPLTATVMALAALISLYFYLRLCYTM 300
Cdd:PRK02504 397 IYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVIKMM 433
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
3.56e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 66.95 E-value: 3.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 51 RAVEATTKYFLTQATAAAVILFA---------GTTNAWT-TGGWDMTNMSDPAAT----TMILAALALKIGLAPMHFWMP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfswlyglsgGEIELQEiVNGLINTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 117 EVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLDP-------LLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYfssnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 190 MIIVL-------QYAPQLTLLalMTYVLMTTTAF--LTLkFSSAT---KINTLATIWSKSPVLTATTALVLLSLGGLPPL 257
Cdd:CHL00049 319 VIIGIivgdsndGYASMITYM--LFYIFMNLGTFacIVL-FGLRTgtdNIRDYAGLYTKDPFLALSLALCLLSLGGIPPL 395
|
250 260 270
....*....|....*....|....*....|....*....
gi 1214146029 258 TGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRL 296
Cdd:CHL00049 396 AGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-300 |
9.09e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 65.76 E-value: 9.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 4 YVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVplMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGG 83
Cdd:PRK12667 116 YTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLV--AYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGT 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 84 WDMTNMS----------------DPAATTMILAALAL-----KIGLAPMHFWMPEV-----------LQGLDLLTG---- 127
Cdd:PRK12667 194 LNMADLSakirglsfpltgglagNPPLALGVALALALwaftiKAAIFPNHFWLPDAhpaapspvsamLSGLVVNVGayai 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 128 -----LILSTWQKLAPMALIIQtaqtldpLLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTL 202
Cdd:PRK12667 274 irflyTIFGISPSLIDFRAALS-------PILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGL 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 203 LALMTYVLMTTTA----FLT----LKFSSATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQG 274
Cdd:PRK12667 347 AAALFHIINHAIAksllFLAsgvfIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG 426
|
330 340
....*....|....*....|....*.
gi 1214146029 275 LPLTATVMALAALISLYFYLRLCYTM 300
Cdd:PRK12667 427 FYLPALVLLIASAISLVGYFRAWYSL 452
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
9.13e-12 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 59.19 E-value: 9.13e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1214146029 291 YFYLRLCYTMTLTISPNTSTSTAPWRTQTTQNSLPLALSTVMALGLLPITP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-336 |
5.46e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.36 E-value: 5.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 33 LEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFA--------GTTNAWTTGGWDMTNMSDPAATTMILAALAL 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvgllygvtGTLNMADLAGALAENPTVVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 105 KIGLAPMHFWMPEVLQGL-DLLTGLILSTWQKLAPMALIIQTAQTLDP---------LLLSVLGLTSTFVGGWGGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAApPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 175 LRKILAYSSIAHMGWMIIVLQYAPQLTLLA----LMTYVLMTTTAFLTL----KFSSATKINTLATIWSKSPVLTATTAL 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAgllhLLHHALMKGALFLAAgaieVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 247 VLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTLTISPNTSTST---APWRTqttqnS 323
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPkqeAPLGM-----L 449
|
330
....*....|...
gi 1214146029 324 LPLALSTVMALGL 336
Cdd:PRK08375 450 APSLALALLSLLL 462
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-298 |
8.34e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 56.87 E-value: 8.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 4 YVLTTLLFSLGLGTtltFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFA----GTTNAW 79
Cdd:TIGR01972 109 YALLLLLEAGVIGV---FLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAilglYFLGGG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 80 TTGGWDMTNMSDPAATTMIL-----AALALKIGLAPMHFWMPEV-----LQGLDLLTGLILstwqKLAPMALII------ 143
Cdd:TIGR01972 186 TFDLLELLNLPLPFGVQTWLflaffIAFAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTYGFLRfnlplf 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 144 -QTAQTLDPLLLsVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLM--TTTAFLTL- 219
Cdd:TIGR01972 262 pDASLYFAPVLA-ALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMIShgLITAALFLl 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 220 -----KFSSATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLT---ATVMALAALISLY 291
Cdd:TIGR01972 341 vgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAflaALGIVLAAAYMLT 420
|
....*..
gi 1214146029 292 FYLRLCY 298
Cdd:TIGR01972 421 LYKRVFF 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-295 |
1.99e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.45 E-value: 1.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 17 TTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATA------AAVILFAGTTNAWTTGGWDMTNMS 90
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 91 DPA----------ATTMILAALALKIGLAPMHFWMPEVLQGLD-----LLTGLILST--WQKLAPMALIIQT--AQTLDP 151
Cdd:PRK08676 195 AHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsvvsaLLSGTVLNIgiYGILRLSALLRQSgaAEQFSN 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 152 LLLsVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLMTTTAFLTLKFSS-------- 223
Cdd:PRK08676 275 VLI-GLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAgilhrqyr 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1214146029 224 ATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVM---ALAALISLYFYLR 295
Cdd:PRK08676 354 SDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLlllLLAASSFAIFLLK 428
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-192 |
2.10e-07 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 52.39 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 49 HPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGW-----DMTNMSDPAATTMIL-----AALALKIGLAPMHFWMPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTAQLLLflaffIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 119 LQ-----GLDLLTGLILstwqKLAPMALI-------IQTAQTLDPLLLsVLGLTSTFVGGWGGLNQTQLRKILAYSSIAH 186
Cdd:COG1008 236 HVeaptaGSVLLAGVLL----KMGGYGLLrfalplfPEASAYFAPLLA-ALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
....*.
gi 1214146029 187 MGWMII 192
Cdd:COG1008 311 MGFVLL 316
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-192 |
4.67e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 51.25 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 33 LEINTLAIVPLMAQHHH-PRAVEATTKYFLTQATAAAVILFA-----GTTNAWTTGGWDMTNMSDPAATTMI-----LAA 101
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGiallyGQYGTLNMAYLAVKMSENPTVVAKIalalfIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 102 LALKIGLAPMHFWMP----EVLQGLDLLtgLILSTWQKLAPMALIIQT--AQTLDPL----LLSVLGLTSTFVGGWGGLN 171
Cdd:PRK08376 230 LAMKSGAVPVHMWLPdaypAAPSSISAM--LLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVV 307
|
170 180
....*....|....*....|.
gi 1214146029 172 QTQLRKILAYSSIAHMGWMII 192
Cdd:PRK08376 308 QKDVKRLLAYHSVSQIGYMLL 328
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
19-190 |
1.44e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 49.93 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 19 LTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFL------TQATAAAVILFAGTTNAWTTGGWDM--TNMS 90
Cdd:PRK06458 123 LALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGEMAIlwTELL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 91 DPAA----TTMILA-ALAL-----KIGLAPMHFWMPE-----------VLQGLDLLTGL-ILSTWQKLAPMALIIQTAQT 148
Cdd:PRK06458 203 KHASlldpTLMKLAfVFLLigfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyAVLRYYILIDAAIGSDFPGR 282
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1214146029 149 LdpllLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK06458 283 L----LLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-287 |
1.39e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 46.48 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 4 YVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYfLTQATAAAVILFAGTTNA-WTTG 82
Cdd:PRK07234 94 RFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY-LFYSNVAMLFYLIGAVLVyQANG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 83 GWDMTNMS--DPAATTMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQ------KLAPMALIIQTaqtLDPLLl 154
Cdd:PRK07234 173 TFAFSGLAtaDPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVvkagvfPLVRCALDVPG---LDLIV- 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 155 SVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIvlqyAPQLTLLALMTYVLMTTTAFL---TLKFSSATK-INTL 230
Cdd:PRK07234 249 RIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILA----APLVGGLYALAHGLVKSTLFLcagALPSRNFTElISQM 324
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1214146029 231 ATIWSKSPVLTATTALVLLSLGGlppltGFMPKWLILqelaKQGLPLTATVMALAAL 287
Cdd:PRK07234 325 LGIGKWIPLTMASFSIAGFPLLA-----GFVSKVLTL----KNLLPWQAIALNLAAV 372
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
9-204 |
2.20e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.23 E-value: 2.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 9 LLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGWD--- 85
Cdd:PRK06473 112 LLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSfdy 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 86 --MTNMSDPAATTM-----ILAALALKIGLAPMHFWMPE-----------VLQG--LDLLT--------GLILSTWQKLA 137
Cdd:PRK06473 192 epLRSHTLPLSTQLlllapILVGFGIKIPLVPFHTWLPDahveastpvsvLLAGvlLKLGTygllrfgvGLFPEAWVYLA 271
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1214146029 138 PMaliiqtaqtldpllLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLA 204
Cdd:PRK06473 272 PW--------------LATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILA 324
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
153-302 |
3.77e-05 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 45.37 E-value: 3.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 153 LLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYVLmTTTAFLTLKFSSA-------- 224
Cdd:PRK08668 274 ILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVF-NHALFKGLFFLIFaaviyrtg 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 225 -TKINTLATIWSKSPVlTATTALVLLSLGGLPPLT-GFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTMTL 302
Cdd:PRK08668 353 tTKISEMGGLIEKMPF-TFAMYLVAIISLAGIPPMsGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVFL 431
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-288 |
5.55e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.91 E-value: 5.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 80 TTGGWDMTNM-SDPAATTMILAALAL-------KIGLAPMHFWMPE-----------------VLQGLDLLTglilstwq 134
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGamaaptpvsaylhaaamVKAGIYLVA-------- 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 135 KLAPMALIIQTAQtldPLLLsVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLA----LMTYVL 210
Cdd:PRK12644 255 RLAPGFADVPVWR---PTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAglamLLAHAL 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 211 MTTTAFLT---LKFSSATK-INTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAA 286
Cdd:PRK12644 331 FKAALFLVvgiIDHSTGTRdIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAG 410
|
..
gi 1214146029 287 LI 288
Cdd:PRK12644 411 IV 412
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
9-300 |
7.12e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 44.37 E-value: 7.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 9 LLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGWDMTN 88
Cdd:PRK08377 113 LFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 89 MSDPAAT----------TMILAALALKIGLAPMHFWMPEVLQGLDLLTGLILSTW---QKLAPMALIIQTAQTLDPL--- 152
Cdd:PRK08377 193 IAQLAGTidptvaqvglALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFvvkAGLYAMARILYLMQNANGWssv 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 153 --LLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLA----LMTYVLMTTTAFLTLKF----S 222
Cdd:PRK08377 273 lkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAgvfhMINHAIVKALLFLAVGYvgitL 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1214146029 223 SATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISLYFYLRLCYTM 300
Cdd:PRK08377 353 GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTM 430
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
3-203 |
9.11e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.93 E-value: 9.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 3 PYVLTTLLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTG 82
Cdd:PRK07363 106 PRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 83 G--WDMTNMSDPAAT--------TMILAALALKIGLAPMHFWMP----EVLQGLDLLTGLILStwqKLAPMALI------ 142
Cdd:PRK07363 186 StsFDYDAISTQNLSlntqlillTGLLLGFGIKIPLVPLHTWLPdaytEASPAVAILLGGVLA---KLGTYGLLrfglql 262
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1214146029 143 -IQTAQTLDPLLlSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLL 203
Cdd:PRK07363 263 fPQTWSLVAPGL-AIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLL 323
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
4-192 |
1.17e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.87 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 4 YVLTTLLFSLGLGTtltFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGG 83
Cdd:PRK12561 90 YFLMLVLYSAQIGV---FLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDT 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 84 --WDMTN--MSDPAATTMILAALALKIGLA------PMHFWMPEV-----LQGLDLLTGLILstwqKLAPMALIIQTAQT 148
Cdd:PRK12561 167 ftFDLAElgAKSYPLALELLLYAGFLIAFGvklpifPLHTWLPDAhgeasAPVSMILAGVLL----KMGGYALIRFNVQM 242
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1214146029 149 LD-------PLLLsVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMII 192
Cdd:PRK12561 243 LPdahvyfaPALA-ILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-194 |
1.38e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.76 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 98 ILAALALKIGLAPMHFWMPEV-----LQGLDLLTGLILstwqKLAPMALIIQT-------AQTLDPLLLSvLGLTSTFVG 165
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILL----KLGGYGLVRLSwpilplgAQNLAPAVIA-MGIVGIVYG 310
|
90 100
....*....|....*....|....*....
gi 1214146029 166 GWGGLNQTQLRKILAYSSIAHMGWMIIVL 194
Cdd:MTH00226 311 SFATCRQIDVKRLVAYSSVAHMGLVSITL 339
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-194 |
1.03e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.10 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 111 MHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQT-----AQTLDPLLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSfplfeKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
....*....
gi 1214146029 186 HMGWMIIVL 194
Cdd:MTH00032 324 QLGYMVLII 332
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-192 |
1.50e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 40.19 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 50 PRAVEATTKYFL-TQATAA---AVILFAGTTNAWTTGGWDM-----TNMSDPAATTMILA---ALALKIGLAPMHFWMPE 117
Cdd:PRK05846 157 KNRIYAATKFFLyTLLGSLlmlVAIIYLVVVYYNATGTFDIadllnLPLPPGVQYWLFLAffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 118 VLQ-----GLDLLTGLILstwqKLAPMALI-------IQTAQTLDPLLLsVLGLTSTFVGGWGGLNQTQLRKILAYSSIA 185
Cdd:PRK05846 237 AHVqaptaGSVLLAGILL----KMGAYGLLrfslplfPDASHEFAPIII-TLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
....*..
gi 1214146029 186 HMGWMII 192
Cdd:PRK05846 312 HMGFVTL 318
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
9-192 |
1.65e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.08 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 9 LLFSLGLGTTLTFASSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTG--GWDM 86
Cdd:PRK02546 120 LMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYGDtpTFDM 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 87 TNMSDPAATTM--------ILAALALKIGLAPMHFWMPEVLQGLD-----LLTGLILstwqKLAPMALIIQTAQTLD--- 150
Cdd:PRK02546 200 TALAAKDFGLGfqllcyagLLIAYGVKLPIVPLHTWLPDAHGEATapvhmLLAGILL----KMGGYALLRMNAGMLPdah 275
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1214146029 151 ----PLLLsVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMII 192
Cdd:PRK02546 276 aqfaPLLI-VLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 320
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-290 |
2.04e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.95 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 97 MILAALALKIGLAPMHFWMPE-----------VLQGLdlLTglilstwqKLAPMALI-----IQTAQTLDPLLLsVLGLT 160
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGL--LT--------KVGVYAIIrthtlLFPGGGLDTLLM-VVALL 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 161 STFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYV----LMTTTAFLTL----KFSSATKINTLAT 232
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVglieRQAGSSSLRRLGG 362
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1214146029 233 IWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALISL 290
Cdd:PRK12665 363 LAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVAGGVVTSL 420
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
101-188 |
2.62e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.65 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 101 ALALKIGLAPMHFWMPEV-----LQGLDLLTGLILS---------TWqKLAPMAliiqtAQTLDPLLLSvLGLTSTFVGG 166
Cdd:MTH00217 215 SLAIKIPKIPFHIWLPQAhveapVAGSVILAGVLLKlggygfirfSW-PLLPEA-----SEYFSPLIQT-LSLLAIIYGS 287
|
90 100
....*....|....*....|..
gi 1214146029 167 WGGLNQTQLRKILAYSSIAHMG 188
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMG 309
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-227 |
2.66e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.68 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 111 MHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQTLD--PLLL---SVLGLTSTFVGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEqaPLALiivTIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1214146029 186 HMGWMIIvlqyAPQLTLLALMTYVLMTTTAFLTLKFSSATKI 227
Cdd:MTH00020 309 QLGYMVV----ACGLSHYSISLFHLMNHAFFKALLFLSAGSV 346
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
4.34e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 38.95 E-value: 4.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 33 LEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWTTGGWDMTNMSD-----------PAATTMILAA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLiiqdlptnraiQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 102 LALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPMALIIQTAQT-------LDPLLLS----VLGLTSTFVGGWGGL 170
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanfvFTTLPFNnvfmILAALAIVFGSVLAI 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 171 NQTQLRKILAYSSIAHMGWMIIVLQYAPQLTLLALMTYV---------LMTTTAFLTLKFSSaTKINTLATIWSKSPVLT 241
Cdd:PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsivksaLFMVSGSISYHFGT-TKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|....*.
gi 1214146029 242 ATTALVLLSLGGLPPLTGFMPKWLIL 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
152-194 |
4.75e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 38.59 E-value: 4.75e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1214146029 152 LLLSVLGLTSTFVGGWGGLNQTQLRKILAYSSIAHMGWMIIVL 194
Cdd:COG1009 276 TVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL 318
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-315 |
7.04e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 38.26 E-value: 7.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 2 NPYVLTTLLFSLGLGTTLTFaSSNWLLAWMGLEINTLAIVPLMAQHHHPRAVEATTKYFLTQATAAAVILFAGTTNAWT- 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIAL-SSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTk 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 81 TGGWDMTNMSDPAATTMILAALALKIGLA-----PMHFWMPE-----------------VLQGLDLLTGLILSTWqKLAP 138
Cdd:PRK06589 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIAktaifPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIF-GLSY 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 139 MALIIQTAQTLdPLLLSVLGLTSTFVGgwggLNQTQLRKILAYSSIAHMGWMI----IVLQYAPQLTLLALMTYVLMTTT 214
Cdd:PRK06589 273 LQRIFAEFNWL-IFIPIVSIFYSSLKA----LKTDNIKKILAYSTISQLSLALlsafILTPKALGAAILHLVSHSFAKIC 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1214146029 215 AFLTL----KFSSATKINTLATIWSKSPVLTATTALVLLSLGGLPPLTGFMPKWLILQELAKQGLPLTATVMALAALIS- 289
Cdd:PRK06589 348 LFYSMgsiySLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASs 427
|
330 340 350
....*....|....*....|....*....|.
gi 1214146029 290 ----LYFYLRLCYTMTLTISPNTS-TSTAPW 315
Cdd:PRK06589 428 ilsaLYLLKILSSIYKPSLSENSFiTKSLPY 458
|
|
|