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Conserved domains on  [gi|1206251541|ref|YP_009383611|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Zelandoperla fenestrata]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-305 1.22e-160

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 449.60  E-value: 1.22e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1206251541 241 VIFLGCDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFF 305
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-305 1.22e-160

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 449.60  E-value: 1.22e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1206251541 241 VIFLGCDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFF 305
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
8-297 5.29e-105

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 308.63  E-value: 5.29e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIPYFTGMYT--FNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLLD 165
Cdd:pfam00146  83 AVIPFGPGLVLadLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 166 FMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIFLG 245
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1206251541 246 ------CDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFL 297
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 3.89e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 294.73  E-value: 3.89e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMY--TFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLV 158
Cdd:COG1005    89 IPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 159 GGFCLLDFMIFQ-NGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 237
Cdd:COG1005   169 GSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSA 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 238 LFCVIFLG-------CDLFS-----LSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFF 305
Cdd:COG1005   249 LATTLFLGgwlgpfpILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328


                  .
gi 1206251541 306 M 306
Cdd:COG1005   329 G 329
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-305 1.22e-160

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 449.60  E-value: 1.22e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1206251541 241 VIFLGCDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFF 305
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-303 3.04e-140

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 398.25  E-value: 3.04e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1206251541 241 VIFLGCDLFSLSFF--LKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKI 303
Cdd:MTH00225  241 ILFFGGFFVTIDLFliLKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-301 7.34e-129

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 369.20  E-value: 7.34e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1206251541 241 VIFLG-----CDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGV 301
Cdd:MTH00143  241 VLFFGgssvlFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-308 1.93e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 351.12  E-value: 1.93e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00111   85 LLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00111  165 YTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTT 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1206251541 241 VIFL-------GCDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFFMSL 308
Cdd:MTH00111  245 ILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-308 1.89e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 346.22  E-value: 1.89e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00071    5 ISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00071   85 TLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00071  165 FSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLST 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1206251541 241 VIFLGC-------DLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFFMSL 308
Cdd:MTH00071  245 ILFLGStynhlqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-308 3.64e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 339.96  E-value: 3.64e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00218    2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00218   82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGG 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00218  162 FSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1206251541 241 VIFLGCDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFFMSL 308
Cdd:MTH00218  242 ILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 2-308 1.13e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 338.91  E-value: 1.13e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   2 MPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLF 81
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  82 LSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGF 161
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 162 CLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCV 241
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1206251541 242 IFLGC-------DLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFFMSL 308
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-308 1.96e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 335.81  E-value: 1.96e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00134    6 ITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLAL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00134   86 TLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGG 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00134  166 FTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSA 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1206251541 241 VIFLGC-------DLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFFMSL 308
Cdd:MTH00134  246 ILFLGAshiptlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-299 5.00e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 324.00  E-value: 5.00e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGG 160
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 161 FCLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 240
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1206251541 241 VIFLGCDLFSLsFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFI 299
Cdd:MTH00195  242 ILFLGGGGTII-VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLA 299
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-299 6.13e-111

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 324.62  E-value: 6.13e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   4 LVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLS 83
Cdd:MTH00040    7 LINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLA 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  84 LVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCL 163
Cdd:MTH00040   87 LLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 164 LDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIF 243
Cdd:MTH00040  167 SSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILF 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1206251541 244 LGCDLFSLSFF--------LKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFI 299
Cdd:MTH00040  247 LGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYL 310
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-299 2.52e-105

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 309.79  E-value: 2.52e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:MTH00010   10 LLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLW 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLLDFM 167
Cdd:MTH00010   90 SLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKII 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 168 IFQNGlWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIFLGCD 247
Cdd:MTH00010  170 MSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFI 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1206251541 248 ----LFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFI 299
Cdd:MTH00010  249 psifISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISI 304
NADHdh pfam00146
NADH dehydrogenase;
8-297 5.29e-105

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 308.63  E-value: 5.29e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIPYFTGMYT--FNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLLD 165
Cdd:pfam00146  83 AVIPFGPGLVLadLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 166 FMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIFLG 245
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1206251541 246 ------CDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFL 297
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 3.89e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 294.73  E-value: 3.89e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSL 80
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMY--TFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLV 158
Cdd:COG1005    89 IPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 159 GGFCLLDFMIFQ-NGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 237
Cdd:COG1005   169 GSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSA 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 238 LFCVIFLG-------CDLFS-----LSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFF 305
Cdd:COG1005   249 LATTLFLGgwlgpfpILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328


                  .
gi 1206251541 306 M 306
Cdd:COG1005   329 G 329
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 8-308 3.26e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 289.71  E-value: 3.26e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:MTH00054    9 LAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAW 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIPYFTG--MYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLLD 165
Cdd:MTH00054   89 GVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTE 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 166 FMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIFLG 245
Cdd:MTH00054  169 IVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLG 248

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1206251541 246 CDLF----------SLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFFMSL 308
Cdd:MTH00054  249 GWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNAL 321
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 8-305 1.36e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 283.16  E-value: 1.36e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:MTH00216   13 LIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVW 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIPYFTG--MYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLLD 165
Cdd:MTH00216   93 GVIPYERGvlISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITE 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 166 FMIFQ-NGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIFL 244
Cdd:MTH00216  173 IVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFL 252

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1206251541 245 GCDLFSLS--------FFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKIFF 305
Cdd:MTH00216  253 GGWLSPIKyfkggagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-301 1.28e-89

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 270.14  E-value: 1.28e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   4 LVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLS 83
Cdd:PRK06076   13 LLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  84 LVVWMIIPYFTG--MYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGF 161
Cdd:PRK06076   93 FLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 162 CLLDFMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCV 241
Cdd:PRK06076  173 NLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITT 252

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 242 IFLG----------CDLFSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGV 301
Cdd:PRK06076  253 LFLGgwlppfplggGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 8-305 1.29e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 232.60  E-value: 1.29e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:MTH00029   14 LIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAW 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIPYFTGMYTFNL--GLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLLD 165
Cdd:MTH00029   94 AIVTMDQGVFLSDLdvGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISE 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 166 FMIFQNGLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIFLG 245
Cdd:MTH00029  174 IVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLG 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 246 CDL-----------------------FSLSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVK 302
Cdd:MTH00029  254 GWLspldgiptppeafsifeqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGIL 333


                  ...
gi 1206251541 303 IFF 305
Cdd:MTH00029  334 IGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 8-303 1.03e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 215.53  E-value: 1.03e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLldfm 167
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSF---- 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 168 IFQNGLWFMFLTFPlalsWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVIFlgcd 247
Cdd:MTH00090  159 VSSFSLSLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF---- 230

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1206251541 248 lFSLSFFLkLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFIGVKI 303
Cdd:MTH00090  231 -FKFSFLM-LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 4-299 2.17e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 168.56  E-value: 2.17e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   4 LVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLS 83
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  84 LVVWMIIPYFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCL 163
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 164 LDFMifqNGLWFMFLTFPLA-LSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCVI 242
Cdd:MTH00058  164 VDFY---YSGWLSVLLFPLIyILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVL 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1206251541 243 FLGCDLFSLSFFLKLtfisFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFI 299
Cdd:MTH00058  241 FFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 8-297 8.24e-38

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 137.39  E-value: 8.24e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   8 LILIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFAGIPQPFCDAIKLFTKEQTYPVTSNYLPYYFSPIFSLFLSLVVW 87
Cdd:CHL00032   34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSY 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  88 MIIP--YFTGMYTFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFVFLVGGFCLLD 165
Cdd:CHL00032  114 LVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVD 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 166 FMIFQN--GLW--------FMFLTFplalswFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFM 235
Cdd:CHL00032  194 IVEAQSkyGFWgwnlwrqpIGFIVF------LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVS 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 236 SMLFCVIFLGCDLFSLSFFLKLTFIS-----------------------FMFIWV--RGTLPRFRYDKLMYLAWKSFLPL 290
Cdd:CHL00032  268 SLFVTVLYLGGWNLSIPYIFIPELFEinktggvfgttigifitlaktylFLFISIttRWTLPRLRMDQLLNLGWKFLLPI 347


                  ....*..
gi 1206251541 291 SLNYLFL 297
Cdd:CHL00032  348 SLGNLLL 354
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-299 2.83e-31

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 118.75  E-value: 2.83e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541   1 MMPLVGGLILIICVLVGVAFLTLLERKVLGYIQIRKGPnkvgfaGIPQPFCDAIKLFTKEQTYPVTSNYLpYYFSPIFSL 80
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541  81 FLSLVVWMIIPYFTGMYTFN-----LGLLFFLcctSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALILLSFV 155
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSfsgdlIVLVYLL---ALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALA 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1206251541 156 FLVGGFCLLDFMIFQN---GLWFMFLTFPLALSWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASI 232
Cdd:COG0650   151 LLAGSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKL 230

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1206251541 233 LFMSMLFCVIFLGCDLFS------LSFFLKLTFISFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLFLFI 299
Cdd:COG0650   231 FVLLSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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