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SURP and G-patch domain-containing protein 2 isoform 1 [Homo sapiens]
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
G_patch | smart00443 | glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in ... |
1009-1054 | 2.08e-14 | ||
glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. : Pssm-ID: 197727 [Multi-domain] Cd Length: 47 Bit Score: 68.34 E-value: 2.08e-14
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
786-836 | 8.22e-13 | ||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. : Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 63.69 E-value: 8.22e-13
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SWAP super family | cl46999 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
589-639 | 2.71e-04 | ||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes The actual alignment was detected with superfamily member smart00648: Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 39.88 E-value: 2.71e-04
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Name | Accession | Description | Interval | E-value | ||
G_patch | smart00443 | glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in ... |
1009-1054 | 2.08e-14 | ||
glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. Pssm-ID: 197727 [Multi-domain] Cd Length: 47 Bit Score: 68.34 E-value: 2.08e-14
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G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
1012-1055 | 4.12e-14 | ||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 67.15 E-value: 4.12e-14
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
786-836 | 8.22e-13 | ||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 63.69 E-value: 8.22e-13
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
785-838 | 9.00e-13 | ||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 63.76 E-value: 9.00e-13
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
589-639 | 2.71e-04 | ||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 39.88 E-value: 2.71e-04
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
588-637 | 6.25e-04 | ||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 38.65 E-value: 6.25e-04
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Name | Accession | Description | Interval | E-value | ||
G_patch | smart00443 | glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in ... |
1009-1054 | 2.08e-14 | ||
glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. Pssm-ID: 197727 [Multi-domain] Cd Length: 47 Bit Score: 68.34 E-value: 2.08e-14
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G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
1012-1055 | 4.12e-14 | ||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 67.15 E-value: 4.12e-14
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
786-836 | 8.22e-13 | ||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 63.69 E-value: 8.22e-13
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
785-838 | 9.00e-13 | ||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 63.76 E-value: 9.00e-13
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
589-639 | 2.71e-04 | ||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 39.88 E-value: 2.71e-04
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
588-637 | 6.25e-04 | ||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 38.65 E-value: 6.25e-04
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G-patch_2 | pfam12656 | G-patch domain; Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ... |
1015-1058 | 2.06e-03 | ||
G-patch domain; Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ATP-dependent DExH-box splicing factor Prp2. As this interaction involves the G-patch sequence in Spp2 and is required for the recruitment of Prp2 to the spliceosome before the first catalytic step of splicing, it is proposed that Spp2 might be an accessory factor that confers spliceosome specificity on Prp2. Pssm-ID: 432700 [Multi-domain] Cd Length: 61 Bit Score: 37.64 E-value: 2.06e-03
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Blast search parameters | ||||
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