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Conserved domains on  [gi|1199862396|ref|YP_009373288|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Corvus corax]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.48e-38

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 123.80  E-value: 1.48e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.48e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 123.80  E-value: 1.48e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 2.60e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 59.89  E-value: 2.60e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  3 ALQLSFFSAFTLSGLGLAFHRtHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1199862396 83 RTHGSDHLHNFNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-96 1.17e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 37.74  E-value: 1.17e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  4 LQLSFFSAFTLSGLGL--AFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVAS 81
Cdd:COG0713    3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                         90
                 ....*....|....*
gi 1199862396 82 TRTHGSDHLHNFNLL 96
Cdd:COG0713   83 YRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.48e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 123.80  E-value: 1.48e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.66e-36

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 118.14  E-value: 2.66e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.28e-36

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 117.40  E-value: 5.28e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 3.80e-24

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 87.68  E-value: 3.80e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 6-96 7.68e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 76.52  E-value: 7.68e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  6 LSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVASTRTH 85
Cdd:MTH00181   3 FVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTH 82

                         90
                 ....*....|.
gi 1199862396 86 GSDHLHNFNLL 96
Cdd:MTH00181  83 GSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 3.93e-15

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 64.55  E-value: 3.93e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*..
gi 1199862396 81 STRTHGSDHLHNFNLLQ 97
Cdd:MTH00043  81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 2.60e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 59.89  E-value: 2.60e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  3 ALQLSFFSAFTLSGLGLAFHRtHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1199862396 83 RTHGSDHLHNFNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 18-98 1.50e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 50.36  E-value: 1.50e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396 18 GLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQttSATLLPLLMLAFSACEAATGLALLVASTRTHGSDHLHNFNLLQ 97
Cdd:MTH00188  19 TFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYME--KELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLNLIK 96


                 .
gi 1199862396 98 C 98
Cdd:MTH00188  97 C 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.61e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 47.53  E-value: 1.61e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIalSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLV--MMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVS 79

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00149  80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 6.77e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 43.48  E-value: 6.77e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396 12 FTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVASTRTHGSDHLH 91
Cdd:MTH00180  13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                 ....*.
gi 1199862396 92 NFNLLQ 97
Cdd:MTH00180  93 SLNLLR 98
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-92 8.69e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 42.83  E-value: 8.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  6 LSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMwpIQTQTTSATLLPLLMLAFSACEAATGLALLVASTRTH 85
Cdd:MTH00162   5 LIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFL--YLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*..
gi 1199862396 86 GSDHLHN 92
Cdd:MTH00162  83 GNDYFSS 89
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 4.23e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 41.28  E-value: 4.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  1 MSALQLSFFSAFTLSGLGLAFHRTHLISALLCLESMMLSMYIaLSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVA 80
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLAL-FIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVL 79

                         90
                 ....*....|....*...
gi 1199862396 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00013  80 MTRSYGNDMLKSLTSNKC 97
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 3.95e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 38.89  E-value: 3.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396 12 FTLSGLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVASTRTHGSDHLH 91
Cdd:MTH00001  13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                 ....*.
gi 1199862396 92 NFNLLQ 97
Cdd:MTH00001  93 SLNSLR 98
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
12-96 1.14e-04

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 37.85  E-value: 1.14e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  12 FTLSGLGLaFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVASTRTHGSDHLH 91
Cdd:PRK05715   15 FCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRGTIDVD 93


                  ....*
gi 1199862396  92 NFNLL 96
Cdd:PRK05715   94 DLNEL 98
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-96 1.17e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 37.74  E-value: 1.17e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199862396  4 LQLSFFSAFTLSGLGL--AFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVAS 81
Cdd:COG0713    3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                         90
                 ....*....|....*
gi 1199862396 82 TRTHGSDHLHNFNLL 96
Cdd:COG0713   83 YRNRGTIDVDDLNEL 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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