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Conserved domains on  [gi|11994084|ref|NP_072064|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Echinops telfairi]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.52e-66

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 195.93  E-value: 1.52e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 11994084   81 SNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.52e-66

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 195.93  E-value: 1.52e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 11994084   81 SNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 3.33e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 100.96  E-value: 3.33e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    18 VLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQSNNLMLM--LSMALFLV 95
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgfVEMLIFIA 78

                          90
                  ....*....|....*..
gi 11994084    96 VILpLGLAYEWTQKGLE 112
Cdd:pfam00507  79 ILL-VGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-113 8.43e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 8.43e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084  11 VLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQSNNLML--ML 88
Cdd:COG0838  16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWfgLI 93

                        90       100
                ....*....|....*....|....*
gi 11994084  89 SMALFLVVILPlGLAYEWTQKGLEW 113
Cdd:COG0838  94 EMLVFIAILLV-GLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.52e-66

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 195.93  E-value: 1.52e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 11994084   81 SNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 3.59e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 144.68  E-value: 3.59e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITV-TINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAI 79
Cdd:MTH00136   1 MNLITTIlTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 11994084   80 QSNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 8.68e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 133.58  E-value: 8.68e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    3 LMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQSN 82
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 11994084   83 NLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00069  82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 1.70e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 132.70  E-value: 1.70e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 11994084   81 SNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWM 114
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.72e-38

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 125.09  E-value: 1.72e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 11994084   81 SNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-113 4.01e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 106.52  E-value: 4.01e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    3 LMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQSN 82
Cdd:MTH00203   4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 11994084   83 NLMLMlsMALFLVVILPLGLAYEWTQKGLEW 113
Cdd:MTH00203  84 SLSLL--LAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 3.33e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 100.96  E-value: 3.33e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    18 VLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQSNNLMLM--LSMALFLV 95
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgfVEMLIFIA 78

                          90
                  ....*....|....*..
gi 11994084    96 VILpLGLAYEWTQKGLE 112
Cdd:pfam00507  79 ILL-VGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 4.66e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 101.09  E-value: 4.66e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLY-IEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAI 79
Cdd:MTH00148   2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 11994084   80 QSNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00148  82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 2-113 1.92e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 91.76  E-value: 1.92e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    2 NLMITVTINVLLASLLVLIAFWL-PQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQ 80
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 11994084   81 SNNLMLMLSMALFLVVILPLGLAYEWTQKGLEW 113
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 5.11e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 88.51  E-value: 5.11e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWL--PQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWA 78
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMlsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 11994084   79 IQSNNLMLMLSMALFLVVILPLGLAYEWTQKGLEWME 115
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 31-113 7.21e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 83.22  E-value: 7.21e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084   31 IEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQSNNLMLMLSMALFLvVILPLGLAYEWTQKG 110
Cdd:MTH00055  36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFL-IILTIGLIYEWVKGG 114


                 ...
gi 11994084  111 LEW 113
Cdd:MTH00055 115 LEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-113 8.43e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 8.43e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084  11 VLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQSNNLML--ML 88
Cdd:COG0838  16 LGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWfgLI 93

                        90       100
                ....*....|....*....|....*
gi 11994084  89 SMALFLVVILPlGLAYEWTQKGLEW 113
Cdd:COG0838  94 EMLVFIAILLV-GLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 1.20e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 79.72  E-value: 1.20e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 11994084   81 SNNLMLM--LSMALFLvVILPLGLAYEWTQKGLEW 113
Cdd:MTH00018  79 YNQIAPFgfWTMVGFL-FILTLGLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 1.82e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.52  E-value: 1.82e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWL--PQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWA 78
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 11994084   79 IQSNNLMLMLSMALFLVVILPLGLAYEWTQKGLEW 113
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 9-113 6.82e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 77.98  E-value: 6.82e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    9 INVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQSNNLMLML 88
Cdd:PRK06602  17 VAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFV 96

                         90       100
                 ....*....|....*....|....*
gi 11994084   89 SMALFLVVILpLGLAYEWTQKGLEW 113
Cdd:PRK06602  97 EAMIFILVLL-VGLVYLWRKGALDW 120
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-113 4.56e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.12  E-value: 4.56e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084   32 EKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQSNNLMLMLSMALF-LVVILPLGLAYEWTQKG 110
Cdd:MTH00030  42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFWIVYtFLIVLAIGLAYEWIKGG 119


                 ...
gi 11994084  111 LEW 113
Cdd:MTH00030 120 LEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 12-113 4.73e-13

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 60.39  E-value: 4.73e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084   12 LLASLLVLIAFWLPQLNLYI----EKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQSNNLMLM 87
Cdd:CHL00022  15 IISSLIPILAFLISGLLAPIskgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVS 92

                         90       100
                 ....*....|....*....|....*..
gi 11994084   88 LSM-ALFLVVILPLGLAYEWTQKGLEW 113
Cdd:CHL00022  93 AFIeALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-113 3.05e-12

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 58.53  E-value: 3.05e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084   33 KASPYECGFDPMSSARLP--FSMKFFLIAITFLIFDLEIALLLPlpWAIQSNNLML--MLSMALFLVVILpLGLAYEWTQ 108
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfgLVEMALFMLTVF-VAYAYVWRR 113


                 ....*
gi 11994084  109 KGLEW 113
Cdd:PRK07928 114 GGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-114 5.88e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 55.13  E-value: 5.88e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084   32 EKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLlpLPWAIQSNNLML--MLSMALFlVVILPLGLAYEWTQK 109
Cdd:PRK07756  41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFL--YPWAVAYDKLGLfaLIEMLIF-VVMLLVGLAYAWKKK 117


                 ....*
gi 11994084  110 GLEWM 114
Cdd:PRK07756 118 VLQWL 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-113 1.56e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 46.20  E-value: 1.56e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    3 LMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARlPFSMKFFLIAITFLIFDLEIALLLPlpWAIQSN 82
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFP--WAVDFK 93

                         90       100       110
                 ....*....|....*....|....*....|...
gi 11994084   83 NLML--MLSMALFlVVILPLGLAYEWTQKGLEW 113
Cdd:PRK08489  94 LLGLfgLIEMLLF-IVLLTIGFIYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-114 1.83e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 40.65  E-value: 1.83e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11994084    1 MNLMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLpwaIQ 80
Cdd:MTH00092   2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL---LV 78

                         90       100       110
                 ....*....|....*....|....*....|....
gi 11994084   81 SNNLMLMLSMALFLVVIlpLGLAYEWTQKGLEWM 114
Cdd:MTH00092  79 SDFSSLISFFMLMIFIF--FGFYMEWWYGKLIWV 110
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-76 2.97e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 2.97e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 11994084   35 SPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLP 76
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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