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Conserved domains on  [gi|1197710337|ref|YP_009368212|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Lepilemur seali]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.52e-68

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 200.17  E-value: 3.52e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197710337  81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.52e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 200.17  E-value: 3.52e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197710337  81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.91e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 103.66  E-value: 2.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  18 VTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKLT-LTTALMLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1197710337  97 ILAAGLTYEWFQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-113 6.55e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.56  E-value: 6.55e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   5 LTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNL 84
Cdd:COG0838    10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFREL 87

                          90       100       110
                  ....*....|....*....|....*....|
gi 1197710337  85 KLT-LTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:COG0838    88 GWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.52e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 200.17  E-value: 3.52e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197710337  81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 2.47e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 145.06  E-value: 2.47e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   1 MNFPLTLITDALLVTT-LVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00136    1 MNLITTILTITIALSLiLAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1197710337  80 QTDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-115 3.49e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 142.06  E-value: 3.49e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   5 LTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNL 84
Cdd:MTH00069    4 LMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTP 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1197710337  85 KLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00069   84 TNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 4.09e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 134.24  E-value: 4.09e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1197710337  81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 2.43e-34

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 114.69  E-value: 2.43e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197710337  81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 11-113 6.44e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 110.76  E-value: 6.44e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  11 ALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLtt 90
Cdd:MTH00203   12 LLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLL-- 89

                          90       100
                  ....*....|....*....|...
gi 1197710337  91 ALMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00203   90 AFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.91e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 103.66  E-value: 2.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  18 VTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKLT-LTTALMLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1197710337  97 ILAAGLTYEWFQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 4.31e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 93.77  E-value: 4.31e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   1 MNFPLTLITDALLVTTLVTIAFWMPQLNIY-TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1197710337  80 QTDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 32-113 5.24e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 93.30  E-value: 5.24e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLISILAAGLTYEWFQKGL 111
Cdd:MTH00161   32 EKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQGAL 111


                  ..
gi 1197710337 112 EW 113
Cdd:MTH00161  112 EW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 11-113 2.79e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 91.59  E-value: 2.79e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  11 ALLVTTLVTIAFWM--PQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTL 88
Cdd:MTH00202   11 SILISSLLFLVSWMlsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGL 90

                          90       100
                  ....*....|....*....|....*
gi 1197710337  89 TTALMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00202   91 LGGTIFLLILIGGLIHEWKEGSLDW 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-113 6.55e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.56  E-value: 6.55e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   5 LTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNL 84
Cdd:COG0838    10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFREL 87

                          90       100       110
                  ....*....|....*....|....*....|
gi 1197710337  85 KLT-LTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:COG0838    88 GWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 32-113 1.44e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 84.91  E-value: 1.44e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLISILAAGLTYEWFQKGL 111
Cdd:MTH00012   34 EKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREGSL 113


                  ..
gi 1197710337 112 EW 113
Cdd:MTH00012  114 DW 115
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 31-114 2.87e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 81.68  E-value: 2.87e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  31 TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLIsILAAGLTYEWFQKG 110
Cdd:MTH00055   36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGG 114


                  ....
gi 1197710337 111 LEWE 114
Cdd:MTH00055  115 LEWE 118
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-114 5.67e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.37  E-value: 5.67e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKLT-LTTALMLISILAAGLTYEWFQKG 110
Cdd:PRK06602   40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLgFVEAMIFILVLLVGLVYLWRKGA 117


                  ....
gi 1197710337 111 LEWE 114
Cdd:PRK06602  118 LDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-114 2.65e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 73.94  E-value: 2.65e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL-TLTTALMLISILAAGLTYEWFQKG 110
Cdd:MTH00018   32 EKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQIAPfGFWTMVGFLFILTLGLIYEWIKGG 109


                  ....
gi 1197710337 111 LEWE 114
Cdd:MTH00018  110 LEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 31-114 7.57e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 70.35  E-value: 7.57e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  31 TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL-TLTTALMLISILAAGLTYEWFQK 109
Cdd:MTH00030   41 SEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKG 118


                  ....*
gi 1197710337 110 GLEWE 114
Cdd:MTH00030  119 GLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 12-113 1.41e-12

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 59.23  E-value: 1.41e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  12 LLVTTLVTI-AFWMPQL----NIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL 86
Cdd:CHL00022   14 LIISSLIPIlAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                          90       100
                  ....*....|....*....|....*...
gi 1197710337  87 -TLTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:CHL00022   92 sAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 8.54e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 54.75  E-value: 8.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337   7 LITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWAIQTDNLKL 86
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93

                          90       100
                  ....*....|....*....|....*...
gi 1197710337  87 -TLTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:PRK07756   94 fALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 2.45e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.52  E-value: 2.45e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  33 KYKPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWAIQTDNLKL--TLTTALMLISILAAgLTYEWFQ 108
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfgLVEMALFMLTVFVA-YAYVWRR 113


                  ....*.
gi 1197710337 109 KGLEWE 114
Cdd:PRK07928  114 GGLEWD 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 12-113 2.36e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 45.66  E-value: 2.36e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  12 LLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwaIQTDNLKLTLTta 91
Cdd:MTH00092   13 LLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL---LVSDFSSLISF-- 87

                          90       100
                  ....*....|....*....|..
gi 1197710337  92 LMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00092   88 FMLMIFIFFGFYMEWWYGKLIW 109
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
31-114 7.40e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 44.66  E-value: 7.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197710337  31 TEKYK--PYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL-TLTTALMLISILAAGLTYEWF 107
Cdd:PRK08489   43 TEKLKlaIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLfGLIEMLLFIVLLTIGFIYAWK 119


                  ....*..
gi 1197710337 108 QKGLEWE 114
Cdd:PRK08489  120 KGALEWQ 126
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 2.20e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.20e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1197710337  34 YKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060   38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 33-104 6.92e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 33.81  E-value: 6.92e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197710337  33 KYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLIsILAAGLTY 104
Cdd:PRK06073   40 KVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYYTFRDLLLLIVVALV-LMYPVLYY 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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