|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06075 |
PRK06075 |
NADH-quinone oxidoreductase subunit D; |
11-400 |
0e+00 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 180385 [Multi-domain] Cd Length: 392 Bit Score: 731.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 11 EKALKNFTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSL 90
Cdd:PRK06075 1 EAEIRNYTLNFGPQHPAAHGVLRLILELDGEVVVRADPHIGYLHRGTEKLAEYRTYLQAIPYFDRLDYVSPMNNEHAYCL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 91 AVEYLLKIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVT 170
Cdd:PRK06075 81 AVEKLLGIEVPERAQYIRVLFLELNRILSHLLWLGTHALDLGAMTVFLWGFREREKLLDLYEAVTGARMHHAYIRPGGVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 171 QDLPYGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDK 250
Cdd:PRK06075 161 RDLPDGLLEDIRDFLDYFPKRLDDYETLLTDNRIWKQRLVGVGVVSKERALALGFTGPMLRASGVAWDLRKSQPYEVYDE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 251 LNFKVPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTD--YKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVV 328
Cdd:PRK06075 241 LDFDVPVGKNGDCYDRYLVRVEEMRQSLRIIEQCLDRLRPPPgpVMVDDPKIAPPARLEMKTSMEALIHHFKLVTEGFRV 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197513288 329 PKGEVYSAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:PRK06075 321 PAGEVYAAVESPKGEFGVYLVSDGGNKPYRVKIRAPSFAHLQALDEMCRGHMLADVVAIIGSLDIVFGEVDR 392
|
|
| NuoD |
COG0649 |
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; ... |
15-400 |
0e+00 |
|
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440414 [Multi-domain] Cd Length: 390 Bit Score: 691.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 15 KNFTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEY 94
Cdd:COG0649 5 EEMVLNMGPQHPSTHGVLRLVLELDGETVVDADPHIGYLHRGFEKLAENRTYTQIIPYTDRLDYLSPMNNELAYVLAVEK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 95 LLKIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLP 174
Cdd:COG0649 85 LLGIEVPERAQYIRVILAELNRIASHLLWLGTYALDLGAMTPFLYAFREREKILDLFEEVTGARMTHNYFRIGGVRRDLP 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 175 YGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFK 254
Cdd:COG0649 165 DGFLEKVREFLDYFPKRLDEYEDLLTGNRIFKARTKGVGVLSAEDAIALGVTGPVLRASGVDYDLRKDEPYSGYDELDFD 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 255 VPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVY 334
Cdd:COG0649 245 VPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPEGPVMAKDPKIAPPPKEEMKTSMEALIHHFKLVTEGFKVPAGEVY 324
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197513288 335 SAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:COG0649 325 AAVESPRGELGFYLVSDGGTKPYRVKIRSPSFANLQALPEMLKGHMLADVVAILGSLDIVLGEVDR 390
|
|
| NuoD |
TIGR01962 |
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH ... |
15-400 |
0e+00 |
|
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH dehydrogenase I complex. It excludes the related chain of NAD(P)H-quinone oxidoreductases from chloroplast and Synechocystis, where the quinone may be plastoquinone rather than ubiquinone. This subunit often appears as a C/D fusion. [Energy metabolism, Electron transport]
Pssm-ID: 273898 Cd Length: 386 Bit Score: 628.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 15 KNFTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEY 94
Cdd:TIGR01962 1 EFMILNLGPQHPSTHGVLRLILELDGEYVVRADPHIGYLHRGTEKLAENRTYQQYIPYTDRLDYLSPFSNELAYCLAVEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 95 LLKIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLP 174
Cdd:TIGR01962 81 LLGIEVPRRAQVIRVMLSELNRISSHLLFIGTHALDLGAMTPFLYAFREREKILDLFEAITGARMHSAYFRIGGVALDLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 175 YGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFK 254
Cdd:TIGR01962 161 ENWLEEIREFLEQFPKRLRDYETLLNENRIWKQRTQGVGVVSAKDALDWGLTGPMLRGSGIDWDIRKSEPYEGYDEYDFD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 255 VPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVY 334
Cdd:TIGR01962 241 VPVGGNGDCYDRYLLRVLEMRESIKIIEQCLEKMPPGPIKADNPKLAPPPKERMLTSMEALIHHFKLVTEGFRVPAGEVY 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197513288 335 SAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:TIGR01962 321 VPIESPKGELGFYIISDGGTKPYRLKIRAPSFAHLQALEAMCVGHYLADLIAILGSIDPVMGEVDR 386
|
|
| Complex1_49kDa |
pfam00346 |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; |
131-400 |
2.00e-177 |
|
Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
Pssm-ID: 459772 Cd Length: 270 Bit Score: 494.60 E-value: 2.00e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 131 VGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLPYGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLV 210
Cdd:pfam00346 1 LGAMTPFLYAFREREKILDLFERITGARMTHSYFRPGGVARDLPEGFLEKIREFLDYFPKRLDEYEDLLTRNRIFKDRTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 211 HIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPF 290
Cdd:pfam00346 81 GVGVLSAEDALALGVTGPMLRASGVPWDLRKDEPYSGYDELDFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 291 TDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVYSAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQ 370
Cdd:pfam00346 161 GPVMADDPKIALPPKEEMKTSMEALIHHFKLVTEGFRVPAGEVYVAVEAPKGELGFYLVSDGGTKPYRVKIRAPSFANLQ 240
|
250 260 270
....*....|....*....|....*....|
gi 1197513288 371 GLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:pfam00346 241 ALPEMCKGHMLADVVAIIGSIDIVMGEVDR 270
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06075 |
PRK06075 |
NADH-quinone oxidoreductase subunit D; |
11-400 |
0e+00 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 180385 [Multi-domain] Cd Length: 392 Bit Score: 731.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 11 EKALKNFTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSL 90
Cdd:PRK06075 1 EAEIRNYTLNFGPQHPAAHGVLRLILELDGEVVVRADPHIGYLHRGTEKLAEYRTYLQAIPYFDRLDYVSPMNNEHAYCL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 91 AVEYLLKIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVT 170
Cdd:PRK06075 81 AVEKLLGIEVPERAQYIRVLFLELNRILSHLLWLGTHALDLGAMTVFLWGFREREKLLDLYEAVTGARMHHAYIRPGGVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 171 QDLPYGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDK 250
Cdd:PRK06075 161 RDLPDGLLEDIRDFLDYFPKRLDDYETLLTDNRIWKQRLVGVGVVSKERALALGFTGPMLRASGVAWDLRKSQPYEVYDE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 251 LNFKVPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTD--YKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVV 328
Cdd:PRK06075 241 LDFDVPVGKNGDCYDRYLVRVEEMRQSLRIIEQCLDRLRPPPgpVMVDDPKIAPPARLEMKTSMEALIHHFKLVTEGFRV 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197513288 329 PKGEVYSAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:PRK06075 321 PAGEVYAAVESPKGEFGVYLVSDGGNKPYRVKIRAPSFAHLQALDEMCRGHMLADVVAIIGSLDIVFGEVDR 392
|
|
| NuoD |
COG0649 |
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; ... |
15-400 |
0e+00 |
|
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440414 [Multi-domain] Cd Length: 390 Bit Score: 691.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 15 KNFTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEY 94
Cdd:COG0649 5 EEMVLNMGPQHPSTHGVLRLVLELDGETVVDADPHIGYLHRGFEKLAENRTYTQIIPYTDRLDYLSPMNNELAYVLAVEK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 95 LLKIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLP 174
Cdd:COG0649 85 LLGIEVPERAQYIRVILAELNRIASHLLWLGTYALDLGAMTPFLYAFREREKILDLFEEVTGARMTHNYFRIGGVRRDLP 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 175 YGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFK 254
Cdd:COG0649 165 DGFLEKVREFLDYFPKRLDEYEDLLTGNRIFKARTKGVGVLSAEDAIALGVTGPVLRASGVDYDLRKDEPYSGYDELDFD 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 255 VPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVY 334
Cdd:COG0649 245 VPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPEGPVMAKDPKIAPPPKEEMKTSMEALIHHFKLVTEGFKVPAGEVY 324
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197513288 335 SAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:COG0649 325 AAVESPRGELGFYLVSDGGTKPYRVKIRSPSFANLQALPEMLKGHMLADVVAILGSLDIVLGEVDR 390
|
|
| NuoD |
TIGR01962 |
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH ... |
15-400 |
0e+00 |
|
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH dehydrogenase I complex. It excludes the related chain of NAD(P)H-quinone oxidoreductases from chloroplast and Synechocystis, where the quinone may be plastoquinone rather than ubiquinone. This subunit often appears as a C/D fusion. [Energy metabolism, Electron transport]
Pssm-ID: 273898 Cd Length: 386 Bit Score: 628.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 15 KNFTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEY 94
Cdd:TIGR01962 1 EFMILNLGPQHPSTHGVLRLILELDGEYVVRADPHIGYLHRGTEKLAENRTYQQYIPYTDRLDYLSPFSNELAYCLAVEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 95 LLKIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLP 174
Cdd:TIGR01962 81 LLGIEVPRRAQVIRVMLSELNRISSHLLFIGTHALDLGAMTPFLYAFREREKILDLFEAITGARMHSAYFRIGGVALDLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 175 YGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFK 254
Cdd:TIGR01962 161 ENWLEEIREFLEQFPKRLRDYETLLNENRIWKQRTQGVGVVSAKDALDWGLTGPMLRGSGIDWDIRKSEPYEGYDEYDFD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 255 VPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVY 334
Cdd:TIGR01962 241 VPVGGNGDCYDRYLLRVLEMRESIKIIEQCLEKMPPGPIKADNPKLAPPPKERMLTSMEALIHHFKLVTEGFRVPAGEVY 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197513288 335 SAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:TIGR01962 321 VPIESPKGELGFYIISDGGTKPYRLKIRAPSFAHLQALEAMCVGHYLADLIAILGSIDPVMGEVDR 386
|
|
| Complex1_49kDa |
pfam00346 |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; |
131-400 |
2.00e-177 |
|
Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
Pssm-ID: 459772 Cd Length: 270 Bit Score: 494.60 E-value: 2.00e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 131 VGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLPYGLLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLV 210
Cdd:pfam00346 1 LGAMTPFLYAFREREKILDLFERITGARMTHSYFRPGGVARDLPEGFLEKIREFLDYFPKRLDEYEDLLTRNRIFKDRTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 211 HIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVPTGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPF 290
Cdd:pfam00346 81 GVGVLSAEDALALGVTGPMLRASGVPWDLRKDEPYSGYDELDFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 291 TDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVYSAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQ 370
Cdd:pfam00346 161 GPVMADDPKIALPPKEEMKTSMEALIHHFKLVTEGFRVPAGEVYVAVEAPKGELGFYLVSDGGTKPYRVKIRAPSFANLQ 240
|
250 260 270
....*....|....*....|....*....|
gi 1197513288 371 GLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:pfam00346 241 ALPEMCKGHMLADVVAIIGSIDIVMGEVDR 270
|
|
| PRK12322 |
PRK12322 |
NADH-quinone oxidoreductase subunit D; |
17-400 |
1.27e-143 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 183437 [Multi-domain] Cd Length: 366 Bit Score: 412.95 E-value: 1.27e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 17 FTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEYLL 96
Cdd:PRK12322 7 MLLNVGPQHPSTHGVFRLVLKIDGEIIVEATPVIGYLHRGTEKLAESLQYTQIIPYTDRMDYLSAMTNNYVYCHAVETMM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 97 KIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLPYG 176
Cdd:PRK12322 87 GLEVPERAEYLRVIAMELGRIASHLVWWGTYLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRIGGVKWDAPDG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 177 LLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVP 256
Cdd:PRK12322 167 WIEKVKEFVPYMREQLAGYHDLVTGNEIFLNRVKGVGIYSAEEAISYSLSGVNLRCTGVNWDLRKDEPYSIYDRFDFDIP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 257 TGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPftdyklDDKKITP--PRRLQmkssmealihhfklysegfvVPKGEVY 334
Cdd:PRK12322 247 VGSVGDCWDRYVCRMQEIEQSLKIIEQAVEQFP------KEGPVLAkvPKIIK--------------------APKGEAY 300
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197513288 335 SAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:PRK12322 301 VRIESPRGEIGCYIASDGKKKPYRLKFRRPSFYNLQILPKLLKGENIANLIAILGSIDIVLGEVDG 366
|
|
| PRK13292 |
PRK13292 |
NADH-quinone oxidoreductase subunit B/C/D; |
19-400 |
2.06e-143 |
|
NADH-quinone oxidoreductase subunit B/C/D;
Pssm-ID: 183955 [Multi-domain] Cd Length: 788 Bit Score: 426.88 E-value: 2.06e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 19 LNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEYLLKI 98
Cdd:PRK13292 407 LNLGPQHPGTHGIIRFVLKLDGEEIVDMDSDIGYHHRGAEKIGERQHWNQFIPYTDRIDYLAGVQNNLAYVNSVETLCGI 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 99 DVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLPYGLL 178
Cdd:PRK13292 487 EVPDRAIYIRVMLSELFRIANHLVWLGTFAADVGAMTPVFYTFTDREKIFDIVEMITGGRMHPAWFRIGGVAEDLPEGWK 566
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 179 DEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVPTG 258
Cdd:PRK13292 567 EAVEAFLRWFPGRLKEYEDLLTGNPIFKARLKGVGVITRDEAVEWGISGPNLRACGLAWDLRKKMPYGGYDRFDFEVPTA 646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 259 VEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVYSAVE 338
Cdd:PRK13292 647 EGGDCYARYLVRMEEMRQSLRIVRQAAAGMPGGRWISDDYRYVLPQKRDTLKDIESLIHHFVNVTRGPAPPKGECYAAIE 726
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197513288 339 APKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:PRK13292 727 APKGENGYFVVSDGLNIAYRMRIRTPSFPHIQALPLLSRGWLVADFLAIIGSIDFVLADLDR 788
|
|
| PRK11742 |
PRK11742 |
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional |
19-400 |
1.25e-132 |
|
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
Pssm-ID: 236965 [Multi-domain] Cd Length: 575 Bit Score: 392.36 E-value: 1.25e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 19 LNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEYLLKI 98
Cdd:PRK11742 194 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIDYLGGCMNEMPYVLAVEKLAGI 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 99 DVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLPYGLL 178
Cdd:PRK11742 274 TVPDRVNVIRVMLSELFRINSHLLYIGTFIQDVGAMTPVFFAFTDRQKIYDVIEAITGFRMHPAWFRIGGVAHDLPRGWD 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 179 DEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVPTG 258
Cdd:PRK11742 354 RLLREFLDWMPKRLDEYEKAALRNSILKGRTQGVAAYNAKEALEWGVTGAGLRATGIDFDVRKARPYSGYENFDFEVPVG 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 259 VEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYKLDDKKITPPRRLQMKSSMEALIHHFKLYSEGFVVPKGEVYSAVE 338
Cdd:PRK11742 434 GNGDCYDRVMVKVEEMRQSLRIIEQCLDNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIE 513
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197513288 339 APKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:PRK11742 514 ATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQQIPSVIRGSLVSDLIVYLGSIDFVMSDVDR 575
|
|
| PRK07415 |
PRK07415 |
NAD(P)H-quinone oxidoreductase subunit H; Validated |
19-400 |
4.25e-122 |
|
NAD(P)H-quinone oxidoreductase subunit H; Validated
Pssm-ID: 180969 [Multi-domain] Cd Length: 394 Bit Score: 359.05 E-value: 4.25e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 19 LNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEYLLKI 98
Cdd:PRK07415 13 LNFGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVSRWDYAAGMFNEAITVNAPEKLANI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 99 DVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARL-HASYIRPGGVTQDLPYGL 177
Cdd:PRK07415 93 PVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGQRLiNNNYFRIGGVAADLPYGW 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 178 LDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVPT 257
Cdd:PRK07415 173 LEKCLDFCDYFGPKIDEYEKLITNNPIFRRRIEGLGTISREEAINWGLSGPMLRASGVKWDLRKVDHYECYDDFDWDVAW 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 258 GVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYK-LDDKKITPPRrlqmKSSMEALIHHF--KLYSEGFVVPKGEVY 334
Cdd:PRK07415 253 ETEGDCLARYRVRIEEMRESVKIIRQACKGIPGGPYEnLEAKRMAEGK----KSEWNGFDYQYvaKKVAPTFKIPNGELY 328
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197513288 335 SAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:PRK07415 329 VRLESGKGELGIFIQGNNDVTPWRWKIRAADFNNLQILPHLLKGAKVADIMAILGSIDVIMGSVDR 394
|
|
| ndhH |
CHL00017 |
NADH dehydrogenase subunit 7 |
18-400 |
5.34e-116 |
|
NADH dehydrogenase subunit 7
Pssm-ID: 176960 Cd Length: 393 Bit Score: 343.60 E-value: 5.34e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 18 TLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEYLLK 97
Cdd:CHL00017 12 IVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLGN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 98 IDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLPYGL 177
Cdd:CHL00017 92 IQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGW 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 178 LDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVPT 257
Cdd:CHL00017 172 IDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIQWDLRKVDHYECYDEFDWEVQW 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 258 GVEGDCYDRYLVRMNEMRESINIIHQCLNAMPFTDYK-LDdkkitpPRRLQMKSSME--ALIHHF--KLYSEGFVVPKGE 332
Cdd:CHL00017 252 QKEGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYEnLE------ARRFDREKDSEwnDFEYRFisKKPSPTFELSKQE 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1197513288 333 VYSAVEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADLVTVIGTQDIVFGEIDR 400
Cdd:CHL00017 326 LYVRVEAPKGELGIFLIGDDSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
|
|
| HycE2 |
COG3261 |
Ni,Fe-hydrogenase III large subunit [Energy production and conversion]; |
17-388 |
2.90e-94 |
|
Ni,Fe-hydrogenase III large subunit [Energy production and conversion];
Pssm-ID: 442492 [Multi-domain] Cd Length: 479 Bit Score: 290.72 E-value: 2.90e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 17 FTLNFGPQHPAAHGVLRLVLELNGEIIERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEYLL 96
Cdd:COG3261 123 HEIPVGPVHAGLIEPGHFRFSVEGERILDLEIRLGYVHRGIEKLAEGRDYEQALYLAERICGICSVAHALAYCQAVEKAA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 97 KIDVPLRAKYIRVLFAELTRLLNHLLSVTTHAMDVGALTPMLWAFEEREKLMEFYEKVSGARLHASYIRPGGVTQDLPYG 176
Cdd:COG3261 203 GIEVPPRAQYLRVILLELERIHSHLLDLGALANDVGFETLFMQCWRLRERVLDLNEALTGNRVLRGINVPGGVRRDLDPE 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 177 LLDEIFNFIIQFSSRLDEIEELLTCNRIWKQRLVHIGIISVQDALNWGFSGVMLRGSGLPWDLRKAFPYEVYDKLNFKVP 256
Cdd:COG3261 283 QLKAILERLDELEEEVKELVDLFLNDPSVLDRLVGTGVLSKEDARDLGAVGPVARASGVDRDVRRDHPYAAYDELDFKVV 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197513288 257 TGVEGDCYDRYLVRMNEMRESINIIHQCLNAMPftdyklDDKKITPPRRLQmkssmealihhfklysegfvvPKGEVYSA 336
Cdd:COG3261 363 TETEGDVYARALVRLEEIFESLDLIRQALEKLP------EGPIRVPVPGLP---------------------PDGEGLGR 415
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1197513288 337 VEAPKGEFGVFLVANSTNKPYRCKIRAPGFAHLQGLDIMTRGHMLADlVTVI 388
Cdd:COG3261 416 VEAPRGELVHYVRTDGDGRLERVKIRTPSFANWPALELALRGNIVAD-FPLI 466
|
|
|