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Conserved domains on  [gi|1197512059|ref|YP_009368829|]
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NADH dehydrogenase subunit 6 (mitochondrion) [Phaneroptera gracilis]

Protein Classification

NADH dehydrogenase subunit 6( domain architecture ID 10009599)

NADH dehydrogenase subunit 6 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-171 3.44e-29

NADH dehydrogenase subunit 6; Provisional


:

Pssm-ID: 214445  Cd Length: 160  Bit Score: 105.27  E-value: 3.44e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059   1 MQFTFITSILLTCMFMLISHPLAMTLTIILQTLLICLTVSTFTHSSLFAYILFLVFLGGMLVLFIYITSLAANEMFTPMI 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059  81 KYAVMFSIILFILMIINMLFDSLLTTNLLNNPdmlknetidmsaNEPIYLLTKLYNTPTKIMTVILVIYLFLTLIAVVKI 160
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFNF------------FENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKI 148

                         170
                  ....*....|.
gi 1197512059 161 TNIFLGPLRQK 171
Cdd:MTH00166  149 TNIFKGPLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-171 3.44e-29

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 105.27  E-value: 3.44e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059   1 MQFTFITSILLTCMFMLISHPLAMTLTIILQTLLICLTVSTFTHSSLFAYILFLVFLGGMLVLFIYITSLAANEMFTPMI 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059  81 KYAVMFSIILFILMIINMLFDSLLTTNLLNNPdmlknetidmsaNEPIYLLTKLYNTPTKIMTVILVIYLFLTLIAVVKI 160
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFNF------------FENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKI 148

                         170
                  ....*....|.
gi 1197512059 161 TNIFLGPLRQK 171
Cdd:MTH00166  149 TNIFKGPLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-171 3.44e-29

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 105.27  E-value: 3.44e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059   1 MQFTFITSILLTCMFMLISHPLAMTLTIILQTLLICLTVSTFTHSSLFAYILFLVFLGGMLVLFIYITSLAANEMFTPMI 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059  81 KYAVMFSIILFILMIINMLFDSLLTTNLLNNPdmlknetidmsaNEPIYLLTKLYNTPTKIMTVILVIYLFLTLIAVVKI 160
Cdd:MTH00166   81 KLLILFLLMLLLMLNNFIKNSEMSNFNNNFNF------------FENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKI 148

                         170
                  ....*....|.
gi 1197512059 161 TNIFLGPLRQK 171
Cdd:MTH00166  149 TNIFKGPLRSK 159
ND6 MTH00212
NADH dehydrogenase subunit 6; Provisional
 1-172 1.27e-11

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214460  Cd Length: 160  Bit Score: 59.25  E-value: 1.27e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059   1 MQFTFITSILLTCMFMLISHPLAMTLTIILQTLLICLTVSTFThSSLFAYILFLVFLGGMLVLFIYITSLAANEMFTPMI 80
Cdd:MTH00212    3 LSLLLSLLLLLMLLFPLSAHPLTLGVSLLLSSLLSCLIITMES-NSWYGYILFLIYIGGLLVLFGYMVALSPNEHLFFKK 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059  81 KYAVMFSIILFILMIINMLFDSLLTTNLLNNPDMLKNetidmsanepiylLTKLYNTPTKIMTVILVIYLFLTLIAVVKI 160
Cdd:MTH00212   82 YFKGFGMILISLNLYLLLMTLGSSNFSPMLNLKLELN-------------VSKILSNNNIPILLFLGLILLIALLMVVKI 148

                         170
                  ....*....|..
gi 1197512059 161 TNIFLGPLRQKY 172
Cdd:MTH00212  149 CQYYKGPLRPFL 160
ND6 MTH00152
NADH dehydrogenase subunit 6; Provisional
 14-169 2.18e-07

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214437  Cd Length: 163  Bit Score: 47.96  E-value: 2.18e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059  14 MFMLISHPLAMTLTIILQTLLICLTVStFTHSSLFAYILFLVFLGGMLVLFIYITSLAANEMFTPMIKYaVMFSIILFIL 93
Cdd:MTH00152   16 LLPLSKQPLSLGLVLLLLSLFVCVEIG-LTLSSWYGYLLFLVYVGGLLVMFAYVVSLSPNPLFGSNFKF-VFFSLTLFGF 93

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197512059  94 MIINMLFDSLLTTNLLNNPDMLKNETIDMSANEPIYLLTKLYntptkiMTVILVIYLFLTLIAVVKITNIFLGPLR 169
Cdd:MTH00152   94 LGLFFFFLYLYSSGGLSLSSLFDGSSGSLSFGGGLYSSSGWS------IFVFLAVLLLIVMVSVVKICYYEEGSLR 163
ND6 MTH00138
NADH dehydrogenase subunit 6; Provisional
 45-72 1.77e-04

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 177196  Cd Length: 173  Bit Score: 40.12  E-value: 1.77e-04
                          10        20
                  ....*....|....*....|....*...
gi 1197512059  45 SSLFAYILFLVFLGGMLVLFIYITSLAA 72
Cdd:MTH00138   48 GSFLSLVLFLIYLGGMLVVFAYSAALAA 75
ND6 MTH00015
NADH dehydrogenase subunit 6; Validated
 1-169 4.03e-04

NADH dehydrogenase subunit 6; Validated


Pssm-ID: 164590  Cd Length: 155  Bit Score: 38.68  E-value: 4.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059   1 MQFTFITSILLTCMFMLISHPLAMTLTIILQTLLICLTVSTFThSSLFAYILFLVFLGGMLVLFIYITSLAANEMFTpmi 80
Cdd:MTH00015    3 LSFFLILMISLTCSLFLATTPITLGINILMMALLLATTMASAL-SSWFAFLTFLIYVGGMLVMFAYFLALTPNQQLN--- 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059  81 kyavMFSIILFILMIINMLFDSLLTTNllnnpdmlkneTIDMSANEPIYLLTKLYNTPTKIMTVILVIYLFLTLIAVVKI 160
Cdd:MTH00015   79 ----LGPMAKYTLITLLTLSTTLKLTN-----------PPSPSFFSSTQGNTFLYQPENAPLLIFLALILLLTMVIVVKL 143


                  ....*....
gi 1197512059 161 TNIFLGPLR 169
Cdd:MTH00015  144 TRRSSGPLR 152
ND6 MTH00065
NADH dehydrogenase subunit 6; Provisional
 46-96 2.49e-03

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214415  Cd Length: 172  Bit Score: 36.75  E-value: 2.49e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1197512059  46 SLFAYILFLVFLGGMLVLFIYITSLAANEMFTPMIKYAVMFSIILFILMII 96
Cdd:MTH00065   49 SFLSLVLFLIYLGGMLVVFAYSAALAAEPYPEAWGSWSVLVYVLFYLLLLI 99
ND6 MTH00214
NADH dehydrogenase subunit 6; Provisional
 1-161 2.79e-03

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214461  Cd Length: 168  Bit Score: 36.51  E-value: 2.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059   1 MQFTFITSILLTCMFMLISH-PLAMTLTIILQTLLICLTVsTFTHSSLFAYILFLVFLGGMLVLFIYITSLAANEMFTPM 79
Cdd:MTH00214    4 FVFLLMFGFLLGLMMVASSPsPYFGALGLVLLALLGCFLL-LSHGNSFLGLILFLIYLGGMLVVFSYSAALAADPYPESW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197512059  80 IKYAVMFSIILFILMIinmlfdSLLTTNLLNNPDMLKNETIDMSANEPIYLLTKLYNtPTKIMTVILVIYLFLTLIAVVK 159
Cdd:MTH00214   83 GGWSVLLFFLFYLLGL------GFVGFYFYGGWEMLSWMGVDEANNLDLSGVSDLYS-RGFFLLLLGGVVLFLVLFVVLE 155


                  ..
gi 1197512059 160 IT 161
Cdd:MTH00214  156 LV 157
ND6 MTH00115
NADH dehydrogenase subunit 6; Provisional
 51-96 7.63e-03

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214424  Cd Length: 174  Bit Score: 35.49  E-value: 7.63e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1197512059  51 ILFLVFLGGMLVLFIYITSLAANEMFTPMIKYAVMFSIILFILMII 96
Cdd:MTH00115   54 VLFLVYLGGMLVVFAYSVSLAADPYPEAWGDWGVVGYVVGFVLVVV 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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