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Conserved domains on  [gi|119610310|gb|EAW89904|]
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hCG1821160, partial [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
KKLCAg1 super family cl21069
Kita-kyushu lung cancer antigen 1; This is a family of cancer antigens.
 1-74 4.18e-20

Kita-kyushu lung cancer antigen 1; This is a family of cancer antigens.


The actual alignment was detected with superfamily member pfam15204:

Pssm-ID: 434535  Cd Length: 87  Bit Score: 76.04  E-value: 4.18e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 119610310   1 MSSVSTAFALLRRFSGLI-SSNTDNDLLFNNLSRDILNNFSHSKNMQKRLLANLKRVEYQMAELEYFLVSEGLRG 74
Cdd:pfam15204  7 MSSSSTFLALVRYSSSGStKSNTDNSLSVSLLSRDILNNFPHSIAMQKLILVNLMVVEYKLAELEHFLVKGLRNG 81
 
Name Accession Description Interval E-value
KKLCAg1 pfam15204
Kita-kyushu lung cancer antigen 1; This is a family of cancer antigens.
 1-74 4.18e-20

Kita-kyushu lung cancer antigen 1; This is a family of cancer antigens.


Pssm-ID: 434535  Cd Length: 87  Bit Score: 76.04  E-value: 4.18e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 119610310   1 MSSVSTAFALLRRFSGLI-SSNTDNDLLFNNLSRDILNNFSHSKNMQKRLLANLKRVEYQMAELEYFLVSEGLRG 74
Cdd:pfam15204  7 MSSSSTFLALVRYSSSGStKSNTDNSLSVSLLSRDILNNFPHSIAMQKLILVNLMVVEYKLAELEHFLVKGLRNG 81
 
Name Accession Description Interval E-value
KKLCAg1 pfam15204
Kita-kyushu lung cancer antigen 1; This is a family of cancer antigens.
 1-74 4.18e-20

Kita-kyushu lung cancer antigen 1; This is a family of cancer antigens.


Pssm-ID: 434535  Cd Length: 87  Bit Score: 76.04  E-value: 4.18e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 119610310   1 MSSVSTAFALLRRFSGLI-SSNTDNDLLFNNLSRDILNNFSHSKNMQKRLLANLKRVEYQMAELEYFLVSEGLRG 74
Cdd:pfam15204  7 MSSSSTFLALVRYSSSGStKSNTDNSLSVSLLSRDILNNFPHSIAMQKLILVNLMVVEYKLAELEHFLVKGLRNG 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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