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caudal type homeobox transcription factor 1 [Homo sapiens]
Caudal_act and homeodomain domain-containing protein( domain architecture ID 11152543)
Caudal_act and homeodomain domain-containing protein
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
156-211 | 4.41e-27 | |||
Homeodomain; : Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 99.50 E-value: 4.41e-27
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Caudal_act | pfam04731 | Caudal like protein activation region; This family consists of the amino termini of proteins ... |
13-142 | 4.26e-16 | |||
Caudal like protein activation region; This family consists of the amino termini of proteins belonging to the caudal-related homeobox protein family. This region is thought to mediate transcription activation. The level of activation caused by mouse Cdx2 is affected by phosphorylation at serine 60 via the mitogen-activated protein kinase pathway. Caudal family proteins are involved in the transcriptional regulation of multiple genes expressed in the intestinal epithelium, and are important in differentiation and maintenance of the intestinal epithelial lining. Caudal proteins always have a homeobox DNA binding domain (pfam00046). : Pssm-ID: 461413 [Multi-domain] Cd Length: 136 Bit Score: 72.86 E-value: 4.26e-16
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Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
156-211 | 4.41e-27 | |||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 99.50 E-value: 4.41e-27
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
156-210 | 7.86e-24 | |||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 90.77 E-value: 7.86e-24
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
156-211 | 7.87e-24 | |||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 90.77 E-value: 7.87e-24
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Caudal_act | pfam04731 | Caudal like protein activation region; This family consists of the amino termini of proteins ... |
13-142 | 4.26e-16 | |||
Caudal like protein activation region; This family consists of the amino termini of proteins belonging to the caudal-related homeobox protein family. This region is thought to mediate transcription activation. The level of activation caused by mouse Cdx2 is affected by phosphorylation at serine 60 via the mitogen-activated protein kinase pathway. Caudal family proteins are involved in the transcriptional regulation of multiple genes expressed in the intestinal epithelium, and are important in differentiation and maintenance of the intestinal epithelial lining. Caudal proteins always have a homeobox DNA binding domain (pfam00046). Pssm-ID: 461413 [Multi-domain] Cd Length: 136 Bit Score: 72.86 E-value: 4.26e-16
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
158-211 | 3.54e-10 | |||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 57.06 E-value: 3.54e-10
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Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
156-211 | 4.41e-27 | |||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 99.50 E-value: 4.41e-27
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
156-210 | 7.86e-24 | |||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 90.77 E-value: 7.86e-24
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
156-211 | 7.87e-24 | |||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 90.77 E-value: 7.87e-24
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Caudal_act | pfam04731 | Caudal like protein activation region; This family consists of the amino termini of proteins ... |
13-142 | 4.26e-16 | |||
Caudal like protein activation region; This family consists of the amino termini of proteins belonging to the caudal-related homeobox protein family. This region is thought to mediate transcription activation. The level of activation caused by mouse Cdx2 is affected by phosphorylation at serine 60 via the mitogen-activated protein kinase pathway. Caudal family proteins are involved in the transcriptional regulation of multiple genes expressed in the intestinal epithelium, and are important in differentiation and maintenance of the intestinal epithelial lining. Caudal proteins always have a homeobox DNA binding domain (pfam00046). Pssm-ID: 461413 [Multi-domain] Cd Length: 136 Bit Score: 72.86 E-value: 4.26e-16
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
158-211 | 3.54e-10 | |||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 57.06 E-value: 3.54e-10
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Blast search parameters | ||||
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