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Conserved domains on  [gi|11863104|ref|NP_071821|]
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head maturation protease [Methanothermobacter phage psiM100]

Protein Classification

Peptidase_S78_2 domain-containing protein( domain architecture ID 10629450)

Peptidase_S78_2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Peptidase_S78_2 pfam14550
Putative phage serine protease XkdF; This domain is largely found on phage proteins. In a ...
 123-230 1.30e-34

Putative phage serine protease XkdF; This domain is largely found on phage proteins. In a number of cases the domain is associated with a SAM-dependent methyltransferase. Members are serine peptidases.


:

Pssm-ID: 405269  Cd Length: 120  Bit Score: 124.43  E-value: 1.30e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11863104   123 VKINKDKRLVTGPVLVPDEPDLDGDVVTAEQVEEVAYKFMEDYQNIDIMHRFRN--VARPVESYILRADEEINGVHLPRG 200
Cdd:pfam14550   6 TKSDDDQQLVYGVVYEPDVVDAQGDFMTAEEIEKAAHGFMENYREIDKMHDFERggEGVVVESYIAPTDEKMGEEGIPKG 85

                          90       100       110
                  ....*....|....*....|....*....|
gi 11863104   201 TWMITARIYDDGIWEGVKTGKYTGFSITAV 230
Cdd:pfam14550  86 TWWVGVRITDDEVWEKIKDGEYTGYSIAGT 115
 
Name Accession Description Interval E-value
Peptidase_S78_2 pfam14550
Putative phage serine protease XkdF; This domain is largely found on phage proteins. In a ...
 123-230 1.30e-34

Putative phage serine protease XkdF; This domain is largely found on phage proteins. In a number of cases the domain is associated with a SAM-dependent methyltransferase. Members are serine peptidases.


Pssm-ID: 405269  Cd Length: 120  Bit Score: 124.43  E-value: 1.30e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11863104   123 VKINKDKRLVTGPVLVPDEPDLDGDVVTAEQVEEVAYKFMEDYQNIDIMHRFRN--VARPVESYILRADEEINGVHLPRG 200
Cdd:pfam14550   6 TKSDDDQQLVYGVVYEPDVVDAQGDFMTAEEIEKAAHGFMENYREIDKMHDFERggEGVVVESYIAPTDEKMGEEGIPKG 85

                          90       100       110
                  ....*....|....*....|....*....|
gi 11863104   201 TWMITARIYDDGIWEGVKTGKYTGFSITAV 230
Cdd:pfam14550  86 TWWVGVRITDDEVWEKIKDGEYTGYSIAGT 115
 
Name Accession Description Interval E-value
Peptidase_S78_2 pfam14550
Putative phage serine protease XkdF; This domain is largely found on phage proteins. In a ...
 123-230 1.30e-34

Putative phage serine protease XkdF; This domain is largely found on phage proteins. In a number of cases the domain is associated with a SAM-dependent methyltransferase. Members are serine peptidases.


Pssm-ID: 405269  Cd Length: 120  Bit Score: 124.43  E-value: 1.30e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11863104   123 VKINKDKRLVTGPVLVPDEPDLDGDVVTAEQVEEVAYKFMEDYQNIDIMHRFRN--VARPVESYILRADEEINGVHLPRG 200
Cdd:pfam14550   6 TKSDDDQQLVYGVVYEPDVVDAQGDFMTAEEIEKAAHGFMENYREIDKMHDFERggEGVVVESYIAPTDEKMGEEGIPKG 85

                          90       100       110
                  ....*....|....*....|....*....|
gi 11863104   201 TWMITARIYDDGIWEGVKTGKYTGFSITAV 230
Cdd:pfam14550  86 TWWVGVRITDDEVWEKIKDGEYTGYSIAGT 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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