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Conserved domains on  [gi|118574745|sp|Q70XV6|]
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RecName: Full=Protein TIC 214; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 214; Short=AtTIC214

Protein Classification

TIC214/Ycf1 family protein( domain architecture ID 11414143)

TIC214/ycf1 family protein is a component of the chloroplast inner membrane protein translocon and forms a 1-MD complex together with Tic100, Tic56, and Tic20-I

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ycf1 CHL00204
Ycf1; Provisional
 8-1794 0e+00

Ycf1; Provisional


:

Pssm-ID: 214395 [Multi-domain]  Cd Length: 1832  Bit Score: 2213.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745    8 LGNLLSLCMKIRNSVVVVGLYYGFITTFSIGPSYLFLLRARVM---EEGTEKEVSATTGFIMGQFMMLISIYYTPLHLAL 84
Cdd:CHL00204    1 LGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMeegEEGTEKKVSATTGFITGQLMMFISIYYAPLHLAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   85 GRPHTITVLVLPYLLFHFFWNNHKHFFSYRSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKM 164
Cdd:CHL00204   81 GRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  165 LFVTSSFVGWLIGHILFMKWVGLVLFWIRQNHSIRSNKYI---KYLVSELRKSMARILSILLFITCVYYLGRIPSPIFTK 241
Cdd:CHL00204  161 LFVTSSFVGWLIGHILFMKWVGLVLVWIQQNNSIRSNVLIrsnKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIFTK 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  242 KLK---ETSETGETEEETDVEIERTSETKGTEQEKEGSTEEDPS-LFCSEEKGDPDKIDEREG--VNGKEKTKDHFnlke 315
Cdd:CHL00204  241 KLKetsETEERVESEEETDVEIETASETKGTKQEQEGSTEEDPSpSLFSEEREDPDKIDETEEirVNGKEKIKKDL---- 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  316 rwynnktvyrdqedntaygdgnqedwelkalklkeekklFWFEKPFITFLFDYQRWNRPFRYIENDQFANTVRNEMSQYF 395
Cdd:CHL00204  317 ---------------------------------------FWFEKPLVTLLFDYKRWNRPFRYIKNDRFENAVRNEMSQYF 357

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  396 FNTCPSDGKRVISFTYPPSLSVFGEMIQKKMSLCGMKELYPKDknLYNHWVSTNEQKRDKVSKEFINRIEALYGGDI--- 472
Cdd:CHL00204  358 FYTCQSDGKERISFTYPPSLSTFWEMIQRKIPLFTLEKLSSDE--LYNQWIYTNEEKKNNLSNEFLNRIEALDKESSsln 435

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  473 VLQKRVRLCNDRDEKECLPKMSDPFLNGSYRGTIKELYSNSIINDpiTSTYNSGEKFWINRIHSLLFC------------ 540
Cdd:CHL00204  436 ILEKRTRLCNDETKKEYLPKIYDPFLNGPYRGRIKKLFSPSIINE--TSIKNNIEGVWINKIHGILLNntdyqefeqkid 513

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  541 ---------------------------------------------------------------DLNDQAIRNKSSEIQEI 557
Cdd:CHL00204  514 tfnkkslsteinesltlinkfgaepksslnlkglslfsepeqekinseeeikifkflfdavitDPNDQTIIKKSIGIKEI 593

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  558 KKKIPQRLYRLTTDLEQDEGEDERESVEFPEIRSRKTKHMVIYADNEENTNIFTHTGAGTTYDpendQMEEVDVIRYTQK 637
Cdd:CHL00204  594 SKKVPRWSYKLIDELEQLEGENEENVPSDHQIRSRKAKRVVIFTDNESNNDIYTNLKDNQNSD----QKDEVALIRYSQQ 669

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  638 PDFRRDLIKGSMRAQRRKTVTWEMLQINLHSPLFLDRIDKNPFFYFDISRIINLIFRDWTKKKPEFQTSNFKEETKKED- 716
Cdd:CHL00204  670 SDFRRGIIKGSMRAQRRKTVIWELFQANVHSPLFLDRIDKLFFFSFDISGLMKKIFRNWNGKDAEFKISDSVEEKTKKKk 749

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  717 ------------------EIEETWETIAFGQVIRGFLLVTQSILRKYIVLPSLIIAKNLVRMLLFQLPEWYEDFKEWSRE 778
Cdd:CHL00204  750 kkekkkeeeykreekariEIAEAWDSILFAQVIRGSLLVTQSILRKYIILPSLIIIKNIGRMLLFQFPEWSEDLKDWKRE 829

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  779 MHIKCTYHGVQLSERKFPKNWLKAGIQIKILFPFYLKPWRKSKLRSHHIDH-PMKKRKKQNSCFLTVWGMETDLPFGPAR 857
Cdd:CHL00204  830 MHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKLRSSHKDRmKKKKKKKNDFCFLTVWGMETELPFGSPR 909

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  858 KGPSFFEPIHKELEKKFKKGKKKWFLFVRIF-----------KEKKIWVIKRVLFIKGVMKELTKANPVFLFGLKRVYDG 926
Cdd:CHL00204  910 KRPSFFEPIFKELKKKIRKFKKKYFLVLKILkertklflkvsKETKKWIIKSFLFLKRIIKELSKRNPILLFGLREIYEL 989

                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  927 SENR--KDSISNNKTISESPIRKSpirtgSMDWTNSSLTERKRKDLSDKTTTIRDQIERIriTRDKKTNFLTIdmNISPN 1004
Cdd:CHL00204  990 NETKkeKDSIISNQMIHESSVQIR-----SMEWTNSSLTEKKIKDLTDRTKTIRNQIEKI--TKEKKKITNTI--NISPN 1060

                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1005 ETSYSDKRSESQKPIWQVSKRRSTRLLYKWRYFMKSFIERIHRNVFLCMINLPRINTQLFLESTKKIIDKYISNDEKNQS 1084
Cdd:CHL00204 1061 KTSYDSKIIESSKKIWQILKRRNTRLIRKSYYFIKFFIERIYIDIFLGIINIPRINTQLFLESTKKIIDKYIYKNEENKE 1140

                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1085 GIDEKNKKKIHFIfiST-RKLLSTISNKKtNNSKIHC---SLSQAYVFYKLSQKPGIKKYRLGSLFQYRRAYS-IKDRIK 1159
Cdd:CHL00204 1141 KINKKKQNTIHFI--STiKKSLYNISNKN-KNSKIFYdlsSLSQAYVFYKLSQTQVINLYKLRSVLQYNGTSFfLKNEIK 1217

                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1160 DYLEIERIFHSESKHKKPGNFGMNEWKNWLIGNYQYNFSYTRWSRLDPQKWRNKVNEQCMIKNKDSKKTDSYsyEKDPLI 1239
Cdd:CHL00204 1218 DYFEAQGIFHSKLKHKNLLNSGMNQWKNWLRSHYQYDLSQIRWSRLVPQKWRNRVNQDRMVQNKDLNKWDSY--EKDRLI 1295

                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1240 NHERHILYSADLLQNHKKKLSKRYRYDLLSYRYINFGNNSsiyrslLQVNEEQRIlilsSHSHIIHKYEQLNLP---AIS 1316
Cdd:CHL00204 1296 HYKKQNDFEANSLLNQKDNFKKDYRYDLLSYKSINYEDKK------FQVNKNQEI----SYNYNTRKVNLFDMPegiAIN 1365

                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1317 DYLEERFIVDMEKKTDRKYFDLRIIKFWSRRNTNTDM--DLRINTNKKNNTGTNYYQMIDKKDliylTSYQEIYPRNKEN 1394
Cdd:CHL00204 1366 NYLGKGDILDIEKNPDRKYLDWRILNFSLRKKVDIESwvDTDSKSKKNTKTGVNNYQIIDKID----HQDFENNQANKKK 1441

                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1395 NFFDWMGMNEELLYRRISNLALWFFPELVLLNDAYKTKPWTIPIRLLLFNGKKKITETQKMNENKKRdlGILSNQKKYLE 1474
Cdd:CHL00204 1442 NFFDWMGMNEEILNRPISNLEFWFFPEFVLLYNTYKIKPWIIPIKLLLLNLNGNENVNKKINQKKKG--FIPSNEKKSIE 1519

                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1475 LGTRDREEKKWWDQEDLRPDTKYQEYFGSDVKNQ-KDVEldvwyregksrEQEDYTDINKSRKKKQSKSNKEAELDLLLK 1553
Cdd:CHL00204 1520 IENRNQEEKEPAGQGELESDKEKKGNLESVLSNQeKNIE-----------EDYAESDIKKRKNKKQYKSNTEAELDFFLK 1588

                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1554 RYLLFQFRWDDSLKKKMINNIKLYSLLLRLMDPKKIVISSIQRGEMWLDIMLIHKDLPLTKLKKGGVFTMEPLRLSRKWN 1633
Cdd:CHL00204 1589 RYLRFQLRWNDFLNQRIINNIKVYCLLLRLINPREIAISSIQRGEMSLDIMMIQKNLTLTELMKKGILIIEPVRLSVKND 1668

                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1634 GQFLMYQTLSISLVHKIKQQTDRRYRETKYIDENFFDLFIPRNGRVFVNGDNKNYDLFVPENISALRRRRELRILSRLNP 1713
Cdd:CHL00204 1669 GQFIIYQTIGISLVHKNKHQINQRYREKKYVDKKNFDESITKHQTITENRDKNHYDLLVPENILSPKRRRELRILICFNS 1748

                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1714 GKGN---INIIFSNRKKIQNCKPFLDRGKHLETDTNKAIKFKLFLWPNHRLEDLACMNRYWFDTNNGTRFSMSRIRMYPR 1790
Cdd:CHL00204 1749 KNKNavdRNSVFCNEKNVKNCGQVLDKKKDLDKDKNKLIKLKFFLWPNYRLEDLACMNRYWFNTNNGSRFSMLRIHMYPR 1828


                  ....
gi 118574745 1791 FGIS 1794
Cdd:CHL00204 1829 LKIR 1832
 
Name Accession Description Interval E-value
ycf1 CHL00204
Ycf1; Provisional
 8-1794 0e+00

Ycf1; Provisional


Pssm-ID: 214395 [Multi-domain]  Cd Length: 1832  Bit Score: 2213.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745    8 LGNLLSLCMKIRNSVVVVGLYYGFITTFSIGPSYLFLLRARVM---EEGTEKEVSATTGFIMGQFMMLISIYYTPLHLAL 84
Cdd:CHL00204    1 LGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMeegEEGTEKKVSATTGFITGQLMMFISIYYAPLHLAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   85 GRPHTITVLVLPYLLFHFFWNNHKHFFSYRSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKM 164
Cdd:CHL00204   81 GRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  165 LFVTSSFVGWLIGHILFMKWVGLVLFWIRQNHSIRSNKYI---KYLVSELRKSMARILSILLFITCVYYLGRIPSPIFTK 241
Cdd:CHL00204  161 LFVTSSFVGWLIGHILFMKWVGLVLVWIQQNNSIRSNVLIrsnKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIFTK 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  242 KLK---ETSETGETEEETDVEIERTSETKGTEQEKEGSTEEDPS-LFCSEEKGDPDKIDEREG--VNGKEKTKDHFnlke 315
Cdd:CHL00204  241 KLKetsETEERVESEEETDVEIETASETKGTKQEQEGSTEEDPSpSLFSEEREDPDKIDETEEirVNGKEKIKKDL---- 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  316 rwynnktvyrdqedntaygdgnqedwelkalklkeekklFWFEKPFITFLFDYQRWNRPFRYIENDQFANTVRNEMSQYF 395
Cdd:CHL00204  317 ---------------------------------------FWFEKPLVTLLFDYKRWNRPFRYIKNDRFENAVRNEMSQYF 357

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  396 FNTCPSDGKRVISFTYPPSLSVFGEMIQKKMSLCGMKELYPKDknLYNHWVSTNEQKRDKVSKEFINRIEALYGGDI--- 472
Cdd:CHL00204  358 FYTCQSDGKERISFTYPPSLSTFWEMIQRKIPLFTLEKLSSDE--LYNQWIYTNEEKKNNLSNEFLNRIEALDKESSsln 435

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  473 VLQKRVRLCNDRDEKECLPKMSDPFLNGSYRGTIKELYSNSIINDpiTSTYNSGEKFWINRIHSLLFC------------ 540
Cdd:CHL00204  436 ILEKRTRLCNDETKKEYLPKIYDPFLNGPYRGRIKKLFSPSIINE--TSIKNNIEGVWINKIHGILLNntdyqefeqkid 513

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  541 ---------------------------------------------------------------DLNDQAIRNKSSEIQEI 557
Cdd:CHL00204  514 tfnkkslsteinesltlinkfgaepksslnlkglslfsepeqekinseeeikifkflfdavitDPNDQTIIKKSIGIKEI 593

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  558 KKKIPQRLYRLTTDLEQDEGEDERESVEFPEIRSRKTKHMVIYADNEENTNIFTHTGAGTTYDpendQMEEVDVIRYTQK 637
Cdd:CHL00204  594 SKKVPRWSYKLIDELEQLEGENEENVPSDHQIRSRKAKRVVIFTDNESNNDIYTNLKDNQNSD----QKDEVALIRYSQQ 669

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  638 PDFRRDLIKGSMRAQRRKTVTWEMLQINLHSPLFLDRIDKNPFFYFDISRIINLIFRDWTKKKPEFQTSNFKEETKKED- 716
Cdd:CHL00204  670 SDFRRGIIKGSMRAQRRKTVIWELFQANVHSPLFLDRIDKLFFFSFDISGLMKKIFRNWNGKDAEFKISDSVEEKTKKKk 749

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  717 ------------------EIEETWETIAFGQVIRGFLLVTQSILRKYIVLPSLIIAKNLVRMLLFQLPEWYEDFKEWSRE 778
Cdd:CHL00204  750 kkekkkeeeykreekariEIAEAWDSILFAQVIRGSLLVTQSILRKYIILPSLIIIKNIGRMLLFQFPEWSEDLKDWKRE 829

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  779 MHIKCTYHGVQLSERKFPKNWLKAGIQIKILFPFYLKPWRKSKLRSHHIDH-PMKKRKKQNSCFLTVWGMETDLPFGPAR 857
Cdd:CHL00204  830 MHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKLRSSHKDRmKKKKKKKNDFCFLTVWGMETELPFGSPR 909

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  858 KGPSFFEPIHKELEKKFKKGKKKWFLFVRIF-----------KEKKIWVIKRVLFIKGVMKELTKANPVFLFGLKRVYDG 926
Cdd:CHL00204  910 KRPSFFEPIFKELKKKIRKFKKKYFLVLKILkertklflkvsKETKKWIIKSFLFLKRIIKELSKRNPILLFGLREIYEL 989

                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  927 SENR--KDSISNNKTISESPIRKSpirtgSMDWTNSSLTERKRKDLSDKTTTIRDQIERIriTRDKKTNFLTIdmNISPN 1004
Cdd:CHL00204  990 NETKkeKDSIISNQMIHESSVQIR-----SMEWTNSSLTEKKIKDLTDRTKTIRNQIEKI--TKEKKKITNTI--NISPN 1060

                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1005 ETSYSDKRSESQKPIWQVSKRRSTRLLYKWRYFMKSFIERIHRNVFLCMINLPRINTQLFLESTKKIIDKYISNDEKNQS 1084
Cdd:CHL00204 1061 KTSYDSKIIESSKKIWQILKRRNTRLIRKSYYFIKFFIERIYIDIFLGIINIPRINTQLFLESTKKIIDKYIYKNEENKE 1140

                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1085 GIDEKNKKKIHFIfiST-RKLLSTISNKKtNNSKIHC---SLSQAYVFYKLSQKPGIKKYRLGSLFQYRRAYS-IKDRIK 1159
Cdd:CHL00204 1141 KINKKKQNTIHFI--STiKKSLYNISNKN-KNSKIFYdlsSLSQAYVFYKLSQTQVINLYKLRSVLQYNGTSFfLKNEIK 1217

                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1160 DYLEIERIFHSESKHKKPGNFGMNEWKNWLIGNYQYNFSYTRWSRLDPQKWRNKVNEQCMIKNKDSKKTDSYsyEKDPLI 1239
Cdd:CHL00204 1218 DYFEAQGIFHSKLKHKNLLNSGMNQWKNWLRSHYQYDLSQIRWSRLVPQKWRNRVNQDRMVQNKDLNKWDSY--EKDRLI 1295

                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1240 NHERHILYSADLLQNHKKKLSKRYRYDLLSYRYINFGNNSsiyrslLQVNEEQRIlilsSHSHIIHKYEQLNLP---AIS 1316
Cdd:CHL00204 1296 HYKKQNDFEANSLLNQKDNFKKDYRYDLLSYKSINYEDKK------FQVNKNQEI----SYNYNTRKVNLFDMPegiAIN 1365

                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1317 DYLEERFIVDMEKKTDRKYFDLRIIKFWSRRNTNTDM--DLRINTNKKNNTGTNYYQMIDKKDliylTSYQEIYPRNKEN 1394
Cdd:CHL00204 1366 NYLGKGDILDIEKNPDRKYLDWRILNFSLRKKVDIESwvDTDSKSKKNTKTGVNNYQIIDKID----HQDFENNQANKKK 1441

                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1395 NFFDWMGMNEELLYRRISNLALWFFPELVLLNDAYKTKPWTIPIRLLLFNGKKKITETQKMNENKKRdlGILSNQKKYLE 1474
Cdd:CHL00204 1442 NFFDWMGMNEEILNRPISNLEFWFFPEFVLLYNTYKIKPWIIPIKLLLLNLNGNENVNKKINQKKKG--FIPSNEKKSIE 1519

                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1475 LGTRDREEKKWWDQEDLRPDTKYQEYFGSDVKNQ-KDVEldvwyregksrEQEDYTDINKSRKKKQSKSNKEAELDLLLK 1553
Cdd:CHL00204 1520 IENRNQEEKEPAGQGELESDKEKKGNLESVLSNQeKNIE-----------EDYAESDIKKRKNKKQYKSNTEAELDFFLK 1588

                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1554 RYLLFQFRWDDSLKKKMINNIKLYSLLLRLMDPKKIVISSIQRGEMWLDIMLIHKDLPLTKLKKGGVFTMEPLRLSRKWN 1633
Cdd:CHL00204 1589 RYLRFQLRWNDFLNQRIINNIKVYCLLLRLINPREIAISSIQRGEMSLDIMMIQKNLTLTELMKKGILIIEPVRLSVKND 1668

                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1634 GQFLMYQTLSISLVHKIKQQTDRRYRETKYIDENFFDLFIPRNGRVFVNGDNKNYDLFVPENISALRRRRELRILSRLNP 1713
Cdd:CHL00204 1669 GQFIIYQTIGISLVHKNKHQINQRYREKKYVDKKNFDESITKHQTITENRDKNHYDLLVPENILSPKRRRELRILICFNS 1748

                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1714 GKGN---INIIFSNRKKIQNCKPFLDRGKHLETDTNKAIKFKLFLWPNHRLEDLACMNRYWFDTNNGTRFSMSRIRMYPR 1790
Cdd:CHL00204 1749 KNKNavdRNSVFCNEKNVKNCGQVLDKKKDLDKDKNKLIKLKFFLWPNYRLEDLACMNRYWFNTNNGSRFSMLRIHMYPR 1828


                  ....
gi 118574745 1791 FGIS 1794
Cdd:CHL00204 1829 LKIR 1832
Ycf1 pfam05758
Ycf1; The chloroplast genomes of most higher plants contain two giant open reading frames ...
 22-866 0e+00

Ycf1; The chloroplast genomes of most higher plants contain two giant open reading frames designated ycf1 and ycf2. Although the function of Ycf1 is unknown, it is known to be an essential gene.


Pssm-ID: 368599 [Multi-domain]  Cd Length: 944  Bit Score: 1170.06  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745    22 VVVVGLYYGFITTFSIGPSYLFLLRARVM---EEGTEKEVSATTGFIMGQFMMLISIYYTPLHLALGRPHTITVLVLPYL 98
Cdd:pfam05758    1 VVVVGLYYGFLTTFSIGPSYLFLLRARVMeegEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745    99 LFHFFWNNHKHFFSYRSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGH 178
Cdd:pfam05758   81 LFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGH 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   179 ILFMKWVGLVLFWIRQNHSIRSNKYI---KYLVSELRKSMARILSILLFITCVYYLGRIPSPIFTKKLK---ETSETGET 252
Cdd:pfam05758  161 ILFMKWVGLVLVWIQQNNSIRSNVLIrsnKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIFTKKLKetsETEERYES 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   253 EEETDVEIERTSETKGTEQEKEGSTEEDP--SLFcSEEKGDPDKIDEREG--VNGKEKTKD--HFNLKERWYNNKTVYrd 326
Cdd:pfam05758  241 EEETDVEIETTSETKGTKQEQERSTEEDPspSLF-SEEGEDLDKIDETEEirVNGKDKIKDefHFHFRETCYKNSPIY-- 317

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   327 qedNTAYGDGNQEDWE-LKALKLKEEKKLFWFEKPFITFLFDYQRWNRPFRYIENDQFANTVRNEMSQYFFNTCPSDGKR 405
Cdd:pfam05758  318 ---ETSYLDGNQENSKlEILKEKKKNKNLFWFEKPLVTLLFDYKRWNRPFRYIKNNRFENAVRNEMSQYFFYTCQSDGKE 394

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   406 VISFTYPPSLSVFGEMIQKKMSLCGMKELYPKDknLYNHWVSTNEQKRDKVSKEFINRIEALYGGDIV---LQKRVRLCN 482
Cdd:pfam05758  395 RISFTYPPSLSTFFEMIQKKIPLFTKEKLSYDE--LSNYWSYTNEEKRNNLSKEFLNRIEALDKESLSldiLEKRTRLCN 472

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   483 DRDEKECLPKMSDPFLNGSYRGTIKELYSNSIINDpiTSTYNSGEKFWINRIHSLLF----------------------- 539
Cdd:pfam05758  473 DETKKEYLPKIYDPFLNGPYRGRIKKVFSPSIINK--TSRKNSLEGVWINKIHGILLssnypefeqkinifdrkslstei 550

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   540 ---------------------------------------------------CDLNDQAIRNKSSEIQEIKKKIPQRLYRL 568
Cdd:pfam05758  551 dyflnlinefskksvsslnfkglslfpeqeqvkinseeekkilkflfdavrTDSNEKTIRKKSIGIKEINKKVPRWSYKL 630

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   569 TTDLEQDEGEDERESVEFPEIRSRKTKHMVIYADNEENTNIFTHTGagttyDPEN-DQMEEVDVIRYTQKPDFRRDLIKG 647
Cdd:pfam05758  631 IDELEQLEGENEENVAEDYQIRSRKAKRVVIFTDNQKNYDTYNNTK-----DTDNsEQKNEVALIRYSQQSDFRRDIIKG 705

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   648 SMRAQRRKTVTWEMLQINLHSPLFLDRIDKNPFFYFDISRIINLIFRDWTKKKPEFQTSNFKEETKKED----------- 716
Cdd:pfam05758  706 SMRAQRRKTVIWELFQANVHSPLFLDRIDKPLFFSFDIFGLIKIIFKNWMRKKEEFKISSYTEEKTKESskkeedkkedn 785

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   717 --------EIEETWETIAFGQVIRGFLLVTQSILRKYIVLPSLIIAKNLVRMLLFQLPEWYEDFKEWSREMHIKCTYHGV 788
Cdd:pfam05758  786 kreerariEIAEAWDSILFAQIIRGCLLITQSILRKYIILPSLIIAKNIGRMLFFQFPEWSEDLKDWKREMHIKCTYNGV 865

                          890       900       910       920       930       940       950
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 118574745   789 QLSERKFPKNWLKAGIQIKILFPFYLKPWRKSKLRSHHIDHPMKKRKKQNSCFLTVWGMETDLPFGPARKGPSFFEPI 866
Cdd:pfam05758  866 QLSETEFPKNWLTDGIQIKILFPFRLKPWHKSKLRSSEKDLMKKKVQKNDFCFLTVWGMETELPFGSPRKRPSFFEPI 943
 
Name Accession Description Interval E-value
ycf1 CHL00204
Ycf1; Provisional
 8-1794 0e+00

Ycf1; Provisional


Pssm-ID: 214395 [Multi-domain]  Cd Length: 1832  Bit Score: 2213.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745    8 LGNLLSLCMKIRNSVVVVGLYYGFITTFSIGPSYLFLLRARVM---EEGTEKEVSATTGFIMGQFMMLISIYYTPLHLAL 84
Cdd:CHL00204    1 LGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMeegEEGTEKKVSATTGFITGQLMMFISIYYAPLHLAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   85 GRPHTITVLVLPYLLFHFFWNNHKHFFSYRSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKM 164
Cdd:CHL00204   81 GRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  165 LFVTSSFVGWLIGHILFMKWVGLVLFWIRQNHSIRSNKYI---KYLVSELRKSMARILSILLFITCVYYLGRIPSPIFTK 241
Cdd:CHL00204  161 LFVTSSFVGWLIGHILFMKWVGLVLVWIQQNNSIRSNVLIrsnKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIFTK 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  242 KLK---ETSETGETEEETDVEIERTSETKGTEQEKEGSTEEDPS-LFCSEEKGDPDKIDEREG--VNGKEKTKDHFnlke 315
Cdd:CHL00204  241 KLKetsETEERVESEEETDVEIETASETKGTKQEQEGSTEEDPSpSLFSEEREDPDKIDETEEirVNGKEKIKKDL---- 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  316 rwynnktvyrdqedntaygdgnqedwelkalklkeekklFWFEKPFITFLFDYQRWNRPFRYIENDQFANTVRNEMSQYF 395
Cdd:CHL00204  317 ---------------------------------------FWFEKPLVTLLFDYKRWNRPFRYIKNDRFENAVRNEMSQYF 357

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  396 FNTCPSDGKRVISFTYPPSLSVFGEMIQKKMSLCGMKELYPKDknLYNHWVSTNEQKRDKVSKEFINRIEALYGGDI--- 472
Cdd:CHL00204  358 FYTCQSDGKERISFTYPPSLSTFWEMIQRKIPLFTLEKLSSDE--LYNQWIYTNEEKKNNLSNEFLNRIEALDKESSsln 435

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  473 VLQKRVRLCNDRDEKECLPKMSDPFLNGSYRGTIKELYSNSIINDpiTSTYNSGEKFWINRIHSLLFC------------ 540
Cdd:CHL00204  436 ILEKRTRLCNDETKKEYLPKIYDPFLNGPYRGRIKKLFSPSIINE--TSIKNNIEGVWINKIHGILLNntdyqefeqkid 513

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  541 ---------------------------------------------------------------DLNDQAIRNKSSEIQEI 557
Cdd:CHL00204  514 tfnkkslsteinesltlinkfgaepksslnlkglslfsepeqekinseeeikifkflfdavitDPNDQTIIKKSIGIKEI 593

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  558 KKKIPQRLYRLTTDLEQDEGEDERESVEFPEIRSRKTKHMVIYADNEENTNIFTHTGAGTTYDpendQMEEVDVIRYTQK 637
Cdd:CHL00204  594 SKKVPRWSYKLIDELEQLEGENEENVPSDHQIRSRKAKRVVIFTDNESNNDIYTNLKDNQNSD----QKDEVALIRYSQQ 669

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  638 PDFRRDLIKGSMRAQRRKTVTWEMLQINLHSPLFLDRIDKNPFFYFDISRIINLIFRDWTKKKPEFQTSNFKEETKKED- 716
Cdd:CHL00204  670 SDFRRGIIKGSMRAQRRKTVIWELFQANVHSPLFLDRIDKLFFFSFDISGLMKKIFRNWNGKDAEFKISDSVEEKTKKKk 749

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  717 ------------------EIEETWETIAFGQVIRGFLLVTQSILRKYIVLPSLIIAKNLVRMLLFQLPEWYEDFKEWSRE 778
Cdd:CHL00204  750 kkekkkeeeykreekariEIAEAWDSILFAQVIRGSLLVTQSILRKYIILPSLIIIKNIGRMLLFQFPEWSEDLKDWKRE 829

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  779 MHIKCTYHGVQLSERKFPKNWLKAGIQIKILFPFYLKPWRKSKLRSHHIDH-PMKKRKKQNSCFLTVWGMETDLPFGPAR 857
Cdd:CHL00204  830 MHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFYLKPWHRSKLRSSHKDRmKKKKKKKNDFCFLTVWGMETELPFGSPR 909

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  858 KGPSFFEPIHKELEKKFKKGKKKWFLFVRIF-----------KEKKIWVIKRVLFIKGVMKELTKANPVFLFGLKRVYDG 926
Cdd:CHL00204  910 KRPSFFEPIFKELKKKIRKFKKKYFLVLKILkertklflkvsKETKKWIIKSFLFLKRIIKELSKRNPILLFGLREIYEL 989

                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745  927 SENR--KDSISNNKTISESPIRKSpirtgSMDWTNSSLTERKRKDLSDKTTTIRDQIERIriTRDKKTNFLTIdmNISPN 1004
Cdd:CHL00204  990 NETKkeKDSIISNQMIHESSVQIR-----SMEWTNSSLTEKKIKDLTDRTKTIRNQIEKI--TKEKKKITNTI--NISPN 1060

                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1005 ETSYSDKRSESQKPIWQVSKRRSTRLLYKWRYFMKSFIERIHRNVFLCMINLPRINTQLFLESTKKIIDKYISNDEKNQS 1084
Cdd:CHL00204 1061 KTSYDSKIIESSKKIWQILKRRNTRLIRKSYYFIKFFIERIYIDIFLGIINIPRINTQLFLESTKKIIDKYIYKNEENKE 1140

                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1085 GIDEKNKKKIHFIfiST-RKLLSTISNKKtNNSKIHC---SLSQAYVFYKLSQKPGIKKYRLGSLFQYRRAYS-IKDRIK 1159
Cdd:CHL00204 1141 KINKKKQNTIHFI--STiKKSLYNISNKN-KNSKIFYdlsSLSQAYVFYKLSQTQVINLYKLRSVLQYNGTSFfLKNEIK 1217

                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1160 DYLEIERIFHSESKHKKPGNFGMNEWKNWLIGNYQYNFSYTRWSRLDPQKWRNKVNEQCMIKNKDSKKTDSYsyEKDPLI 1239
Cdd:CHL00204 1218 DYFEAQGIFHSKLKHKNLLNSGMNQWKNWLRSHYQYDLSQIRWSRLVPQKWRNRVNQDRMVQNKDLNKWDSY--EKDRLI 1295

                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1240 NHERHILYSADLLQNHKKKLSKRYRYDLLSYRYINFGNNSsiyrslLQVNEEQRIlilsSHSHIIHKYEQLNLP---AIS 1316
Cdd:CHL00204 1296 HYKKQNDFEANSLLNQKDNFKKDYRYDLLSYKSINYEDKK------FQVNKNQEI----SYNYNTRKVNLFDMPegiAIN 1365

                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1317 DYLEERFIVDMEKKTDRKYFDLRIIKFWSRRNTNTDM--DLRINTNKKNNTGTNYYQMIDKKDliylTSYQEIYPRNKEN 1394
Cdd:CHL00204 1366 NYLGKGDILDIEKNPDRKYLDWRILNFSLRKKVDIESwvDTDSKSKKNTKTGVNNYQIIDKID----HQDFENNQANKKK 1441

                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1395 NFFDWMGMNEELLYRRISNLALWFFPELVLLNDAYKTKPWTIPIRLLLFNGKKKITETQKMNENKKRdlGILSNQKKYLE 1474
Cdd:CHL00204 1442 NFFDWMGMNEEILNRPISNLEFWFFPEFVLLYNTYKIKPWIIPIKLLLLNLNGNENVNKKINQKKKG--FIPSNEKKSIE 1519

                        1610      1620      1630      1640      1650      1660      1670      1680
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1475 LGTRDREEKKWWDQEDLRPDTKYQEYFGSDVKNQ-KDVEldvwyregksrEQEDYTDINKSRKKKQSKSNKEAELDLLLK 1553
Cdd:CHL00204 1520 IENRNQEEKEPAGQGELESDKEKKGNLESVLSNQeKNIE-----------EDYAESDIKKRKNKKQYKSNTEAELDFFLK 1588

                        1690      1700      1710      1720      1730      1740      1750      1760
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1554 RYLLFQFRWDDSLKKKMINNIKLYSLLLRLMDPKKIVISSIQRGEMWLDIMLIHKDLPLTKLKKGGVFTMEPLRLSRKWN 1633
Cdd:CHL00204 1589 RYLRFQLRWNDFLNQRIINNIKVYCLLLRLINPREIAISSIQRGEMSLDIMMIQKNLTLTELMKKGILIIEPVRLSVKND 1668

                        1770      1780      1790      1800      1810      1820      1830      1840
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1634 GQFLMYQTLSISLVHKIKQQTDRRYRETKYIDENFFDLFIPRNGRVFVNGDNKNYDLFVPENISALRRRRELRILSRLNP 1713
Cdd:CHL00204 1669 GQFIIYQTIGISLVHKNKHQINQRYREKKYVDKKNFDESITKHQTITENRDKNHYDLLVPENILSPKRRRELRILICFNS 1748

                        1850      1860      1870      1880      1890      1900      1910      1920
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745 1714 GKGN---INIIFSNRKKIQNCKPFLDRGKHLETDTNKAIKFKLFLWPNHRLEDLACMNRYWFDTNNGTRFSMSRIRMYPR 1790
Cdd:CHL00204 1749 KNKNavdRNSVFCNEKNVKNCGQVLDKKKDLDKDKNKLIKLKFFLWPNYRLEDLACMNRYWFNTNNGSRFSMLRIHMYPR 1828


                  ....
gi 118574745 1791 FGIS 1794
Cdd:CHL00204 1829 LKIR 1832
Ycf1 pfam05758
Ycf1; The chloroplast genomes of most higher plants contain two giant open reading frames ...
 22-866 0e+00

Ycf1; The chloroplast genomes of most higher plants contain two giant open reading frames designated ycf1 and ycf2. Although the function of Ycf1 is unknown, it is known to be an essential gene.


Pssm-ID: 368599 [Multi-domain]  Cd Length: 944  Bit Score: 1170.06  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745    22 VVVVGLYYGFITTFSIGPSYLFLLRARVM---EEGTEKEVSATTGFIMGQFMMLISIYYTPLHLALGRPHTITVLVLPYL 98
Cdd:pfam05758    1 VVVVGLYYGFLTTFSIGPSYLFLLRARVMeegEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745    99 LFHFFWNNHKHFFSYRSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGH 178
Cdd:pfam05758   81 LFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFVGWLIGH 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   179 ILFMKWVGLVLFWIRQNHSIRSNKYI---KYLVSELRKSMARILSILLFITCVYYLGRIPSPIFTKKLK---ETSETGET 252
Cdd:pfam05758  161 ILFMKWVGLVLVWIQQNNSIRSNVLIrsnKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIFTKKLKetsETEERYES 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   253 EEETDVEIERTSETKGTEQEKEGSTEEDP--SLFcSEEKGDPDKIDEREG--VNGKEKTKD--HFNLKERWYNNKTVYrd 326
Cdd:pfam05758  241 EEETDVEIETTSETKGTKQEQERSTEEDPspSLF-SEEGEDLDKIDETEEirVNGKDKIKDefHFHFRETCYKNSPIY-- 317

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   327 qedNTAYGDGNQEDWE-LKALKLKEEKKLFWFEKPFITFLFDYQRWNRPFRYIENDQFANTVRNEMSQYFFNTCPSDGKR 405
Cdd:pfam05758  318 ---ETSYLDGNQENSKlEILKEKKKNKNLFWFEKPLVTLLFDYKRWNRPFRYIKNNRFENAVRNEMSQYFFYTCQSDGKE 394

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   406 VISFTYPPSLSVFGEMIQKKMSLCGMKELYPKDknLYNHWVSTNEQKRDKVSKEFINRIEALYGGDIV---LQKRVRLCN 482
Cdd:pfam05758  395 RISFTYPPSLSTFFEMIQKKIPLFTKEKLSYDE--LSNYWSYTNEEKRNNLSKEFLNRIEALDKESLSldiLEKRTRLCN 472

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   483 DRDEKECLPKMSDPFLNGSYRGTIKELYSNSIINDpiTSTYNSGEKFWINRIHSLLF----------------------- 539
Cdd:pfam05758  473 DETKKEYLPKIYDPFLNGPYRGRIKKVFSPSIINK--TSRKNSLEGVWINKIHGILLssnypefeqkinifdrkslstei 550

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   540 ---------------------------------------------------CDLNDQAIRNKSSEIQEIKKKIPQRLYRL 568
Cdd:pfam05758  551 dyflnlinefskksvsslnfkglslfpeqeqvkinseeekkilkflfdavrTDSNEKTIRKKSIGIKEINKKVPRWSYKL 630

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   569 TTDLEQDEGEDERESVEFPEIRSRKTKHMVIYADNEENTNIFTHTGagttyDPEN-DQMEEVDVIRYTQKPDFRRDLIKG 647
Cdd:pfam05758  631 IDELEQLEGENEENVAEDYQIRSRKAKRVVIFTDNQKNYDTYNNTK-----DTDNsEQKNEVALIRYSQQSDFRRDIIKG 705

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   648 SMRAQRRKTVTWEMLQINLHSPLFLDRIDKNPFFYFDISRIINLIFRDWTKKKPEFQTSNFKEETKKED----------- 716
Cdd:pfam05758  706 SMRAQRRKTVIWELFQANVHSPLFLDRIDKPLFFSFDIFGLIKIIFKNWMRKKEEFKISSYTEEKTKESskkeedkkedn 785

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118574745   717 --------EIEETWETIAFGQVIRGFLLVTQSILRKYIVLPSLIIAKNLVRMLLFQLPEWYEDFKEWSREMHIKCTYHGV 788
Cdd:pfam05758  786 kreerariEIAEAWDSILFAQIIRGCLLITQSILRKYIILPSLIIAKNIGRMLFFQFPEWSEDLKDWKREMHIKCTYNGV 865

                          890       900       910       920       930       940       950
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 118574745   789 QLSERKFPKNWLKAGIQIKILFPFYLKPWRKSKLRSHHIDHPMKKRKKQNSCFLTVWGMETDLPFGPARKGPSFFEPI 866
Cdd:pfam05758  866 QLSETEFPKNWLTDGIQIKILFPFRLKPWHKSKLRSSEKDLMKKKVQKNDFCFLTVWGMETELPFGSPRKRPSFFEPI 943
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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