fibrinogen beta chain, partial [Opisthocomus hoazin]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
FReD super family | cl00085 | Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is ... |
6-112 | 5.90e-42 | |||
Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular arrangement called the disulfide knot. The C termini of fibrinogen chains end in globular domains, which are not completely equivalent. C terminal globular domains of the gamma chains (C-gamma) dimerize and bind to the GPR motif of the N-terminal domain of the alpha chain, while the GHR motif of N-terminal domain of the beta chain binds to the C terminal globular domains of another beta chain (C-beta), which leads to lattice formation. The actual alignment was detected with superfamily member pfam00147: Pssm-ID: 412152 [Multi-domain] Cd Length: 221 Bit Score: 137.27 E-value: 5.90e-42
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Name | Accession | Description | Interval | E-value | |||
Fibrinogen_C | pfam00147 | Fibrinogen beta and gamma chains, C-terminal globular domain; |
6-112 | 5.90e-42 | |||
Fibrinogen beta and gamma chains, C-terminal globular domain; Pssm-ID: 395095 [Multi-domain] Cd Length: 221 Bit Score: 137.27 E-value: 5.90e-42
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FReD | cd00087 | Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is ... |
7-110 | 1.35e-36 | |||
Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular arrangement called the disulfide knot. The C termini of fibrinogen chains end in globular domains, which are not completely equivalent. C terminal globular domains of the gamma chains (C-gamma) dimerize and bind to the GPR motif of the N-terminal domain of the alpha chain, while the GHR motif of N-terminal domain of the beta chain binds to the C terminal globular domains of another beta chain (C-beta), which leads to lattice formation. Pssm-ID: 238040 [Multi-domain] Cd Length: 215 Bit Score: 123.50 E-value: 1.35e-36
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FBG | smart00186 | Fibrinogen-related domains (FReDs); Domain present at the C-termini of fibrinogen beta and ... |
7-109 | 4.68e-36 | |||
Fibrinogen-related domains (FReDs); Domain present at the C-termini of fibrinogen beta and gamma chains, and a variety of fibrinogen-related proteins, including tenascin and Drosophila scabrous. Pssm-ID: 214548 [Multi-domain] Cd Length: 212 Bit Score: 122.00 E-value: 4.68e-36
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Name | Accession | Description | Interval | E-value | |||
Fibrinogen_C | pfam00147 | Fibrinogen beta and gamma chains, C-terminal globular domain; |
6-112 | 5.90e-42 | |||
Fibrinogen beta and gamma chains, C-terminal globular domain; Pssm-ID: 395095 [Multi-domain] Cd Length: 221 Bit Score: 137.27 E-value: 5.90e-42
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FReD | cd00087 | Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is ... |
7-110 | 1.35e-36 | |||
Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular arrangement called the disulfide knot. The C termini of fibrinogen chains end in globular domains, which are not completely equivalent. C terminal globular domains of the gamma chains (C-gamma) dimerize and bind to the GPR motif of the N-terminal domain of the alpha chain, while the GHR motif of N-terminal domain of the beta chain binds to the C terminal globular domains of another beta chain (C-beta), which leads to lattice formation. Pssm-ID: 238040 [Multi-domain] Cd Length: 215 Bit Score: 123.50 E-value: 1.35e-36
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FBG | smart00186 | Fibrinogen-related domains (FReDs); Domain present at the C-termini of fibrinogen beta and ... |
7-109 | 4.68e-36 | |||
Fibrinogen-related domains (FReDs); Domain present at the C-termini of fibrinogen beta and gamma chains, and a variety of fibrinogen-related proteins, including tenascin and Drosophila scabrous. Pssm-ID: 214548 [Multi-domain] Cd Length: 212 Bit Score: 122.00 E-value: 4.68e-36
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Blast search parameters | ||||
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