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Conserved domains on  [gi|1180888378|ref|WP_084332746|]
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oxidoreductase-like domain-containing protein [Marinobacterium jannaschii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Oxidored-like super family cl10765
Oxidoreductase-like protein, N-terminal; Members of this family are found in the N terminal ...
 5-38 1.70e-07

Oxidoreductase-like protein, N-terminal; Members of this family are found in the N terminal region of various oxidoreductase like proteins. Their exact function is, as yet, unknown.


The actual alignment was detected with superfamily member pfam09791:

Pssm-ID: 462904  Cd Length: 45  Bit Score: 41.78  E-value: 1.70e-07
                         10        20        30
                 ....*....|....*....|....*....|....
gi 1180888378  5 ERPQPPGEheCCEGGCSPCVWDTYYEELNEWQAK 38
Cdd:pfam09791  8 PKPEEPDN--CCMSGCVNCVWDLYREDLEEWAEA 39
 
Name Accession Description Interval E-value
Oxidored-like pfam09791
Oxidoreductase-like protein, N-terminal; Members of this family are found in the N terminal ...
 5-38 1.70e-07

Oxidoreductase-like protein, N-terminal; Members of this family are found in the N terminal region of various oxidoreductase like proteins. Their exact function is, as yet, unknown.


Pssm-ID: 462904  Cd Length: 45  Bit Score: 41.78  E-value: 1.70e-07
                         10        20        30
                 ....*....|....*....|....*....|....
gi 1180888378  5 ERPQPPGEheCCEGGCSPCVWDTYYEELNEWQAK 38
Cdd:pfam09791  8 PKPEEPDN--CCMSGCVNCVWDLYREDLEEWAEA 39
 
Name Accession Description Interval E-value
Oxidored-like pfam09791
Oxidoreductase-like protein, N-terminal; Members of this family are found in the N terminal ...
 5-38 1.70e-07

Oxidoreductase-like protein, N-terminal; Members of this family are found in the N terminal region of various oxidoreductase like proteins. Their exact function is, as yet, unknown.


Pssm-ID: 462904  Cd Length: 45  Bit Score: 41.78  E-value: 1.70e-07
                         10        20        30
                 ....*....|....*....|....*....|....
gi 1180888378  5 ERPQPPGEheCCEGGCSPCVWDTYYEELNEWQAK 38
Cdd:pfam09791  8 PKPEEPDN--CCMSGCVNCVWDLYREDLEEWAEA 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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